Psyllid ID: psy616
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1152 | 2.2.26 [Sep-21-2011] | |||||||
| P40872 | 4262 | Polyketide synthase PksM | yes | N/A | 0.952 | 0.257 | 0.402 | 0.0 | |
| O31782 | 5488 | Polyketide synthase PksN | no | N/A | 0.780 | 0.163 | 0.329 | 1e-152 | |
| Q05470 | 4538 | Polyketide synthase PksL | no | N/A | 0.766 | 0.194 | 0.328 | 1e-135 | |
| P40806 | 5043 | Polyketide synthase PksJ | no | N/A | 0.583 | 0.133 | 0.350 | 1e-123 | |
| O31784 | 2543 | Polyketide synthase PksR | no | N/A | 0.539 | 0.244 | 0.312 | 7e-99 | |
| Q9R9J1 | 3971 | Mycosubtilin synthase sub | no | N/A | 0.514 | 0.149 | 0.337 | 8e-98 | |
| Q03133 | 3172 | Erythronolide synthase, m | yes | N/A | 0.744 | 0.270 | 0.250 | 1e-95 | |
| Q10977 | 1876 | Phthiocerol synthesis pol | yes | N/A | 0.439 | 0.269 | 0.342 | 7e-94 | |
| Q7TXM0 | 1876 | Phthiocerol/phenolphthioc | yes | N/A | 0.439 | 0.269 | 0.341 | 3e-93 | |
| Q7TXL9 | 1538 | Phthiocerol/phenolphthioc | no | N/A | 0.367 | 0.275 | 0.380 | 1e-89 |
| >sp|P40872|PKSM_BACSU Polyketide synthase PksM OS=Bacillus subtilis (strain 168) GN=pksM PE=1 SV=4 | Back alignment and function desciption |
|---|
Score = 868 bits (2242), Expect = 0.0, Method: Composition-based stats.
Identities = 470/1167 (40%), Positives = 709/1167 (60%), Gaps = 70/1167 (5%)
Query: 11 KVWVKSPLISLPISKVKKNNLLCFSSNKDFQNKIVESISSY---TDIIFIEQSDNIKISP 67
+VW + P +L ++K L+CF + ++ QN ++ + T +IFI Q + S
Sbjct: 2930 EVWKEEP-ATLTSKRIK--TLICFLTEREKQNAFASALKNVDQDTKVIFISQGE--VYSK 2984
Query: 68 NDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKK 127
Y+I + + I E+ + D++ Y+WP+EDK CI + I+Y LQ +
Sbjct: 2985 QSEYSYQIVRQEPVTFEKAFQSIKEELGEPDAILYMWPMEDKRCIKDHSCIVYLLQGMSA 3044
Query: 128 SKLYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIVFAEKITNFNI 187
+KL+ +L+++G E+ L Y SW+ FERSL +++P T+++ +F + ++
Sbjct: 3045 AKLHPSRLLLAGCF-----EDSLDRSYLESWIGFERSLGLVLPHTKVTGIF-QPAEQGSM 3098
Query: 188 KNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGR 247
+W ++ ELQ +++Y +L RY +I+ ++ NS +K GGTYLITGG G
Sbjct: 3099 DDWTRKVWAELQASTEQTVLY--QNLKRYVNHIEQTTIQP-DNSKLKSGGTYLITGGVGG 3155
Query: 248 LGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN---KAIYIQVDVSDKLKMISEI 304
LG LF+ +L Y+ NLIL+GRS N K++K+ + +A+Y + DVSD + M +
Sbjct: 3156 LGYLFAKHLAKNYAANLILTGRSPFNDEKQKQIKELKDLGGEAMYAEADVSDPIAMGDCV 3215
Query: 305 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQ 364
+ G I+GV+H AGI S I + ++F ++ KI+GTIAL+ L+N
Sbjct: 3216 KRGKDRFGAINGVIHAAGIES-DSAIFDKKIESFQRIIEPKINGTIALDEWLKN------ 3268
Query: 365 KNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424
LDF+CYFSSSSA+LGDFG CDYA+GNRFQ YA+Y N + + K INWP+W
Sbjct: 3269 -EDLDFMCYFSSSSAVLGDFGCCDYAIGNRFQMAYAQYRN-----ELHNGKTFVINWPVW 3322
Query: 425 NNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQIIN 484
+ KIG+ E TD Y KSS Q+ L +G+++FE +L Q Q+LV++G+ ++++ +
Sbjct: 3323 KDGGMKIGDEETTDMYLKSSGQRFLEAEEGIRMFEHILAQQDAQHLVIAGQPSRVSRFLG 3382
Query: 485 ----------NIAPKVSENK-KINNFNIEKFIENDIKNHICNILNTKKSEIYKNKNLADY 533
AP ENK ++ +IEK +E+D+K HI +L K ++ NKN AD+
Sbjct: 3383 MTEPAIPEPATQAPLAQENKDEVKTLSIEKRLEHDLKEHIHTLLKISKDKLNLNKNWADF 3442
Query: 534 GFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKT 593
GFDSI LA+FS +LSK +++++ P++FF YSTL+ LI++F+ +H + FYR+ +
Sbjct: 3443 GFDSIYLAKFSNVLSKHFNIEVTPALFFGYSTLQELISFFLTDHKELIEAFYRDD---AS 3499
Query: 594 ESKNISILYDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWK 653
E++ Y SKKS ++ +E IAIIGMSGRFP A +++E W
Sbjct: 3500 EAQKPPEAYAVIPVALEPEASKKSIRQVH-------DEPIAIIGMSGRFPQADSVHELWD 3552
Query: 654 ILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAE 713
L N K IS+IP + DW +P K+ +W + ID FDPLFF+ISP EAE
Sbjct: 3553 NLKNGKSCISDIPGERRDWGRANRDPEKAV----PRWGAFLKDIDRFDPLFFQISPKEAE 3608
Query: 714 RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAI 773
MDPRQR L+E+W EDAGY ++I + G++VGVEEG D + T NA
Sbjct: 3609 SMDPRQRIFLEEAWHTFEDAGYMGDRIKGKSCGVYVGVEEGEYAHLTGDTDYINGTQNAT 3668
Query: 774 LSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIA 833
LSAR+AY +DLKGP MA+ ACSS LVA H AC +LRQ +C+ A++ GV+L IS ++ A
Sbjct: 3669 LSARIAYALDLKGPNMALTAACSSGLVAIHQACSALRQGDCEMALAGGVSLNISHMSFEA 3728
Query: 834 MTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDG 893
+T A MLSP+G+C VFD+ ANGLVP EAV AV+LK LS+A+ D D I+ I+ SG+NYDG
Sbjct: 3729 LTRAEMLSPNGQCKVFDQDANGLVPGEAVAAVLLKPLSKAIEDKDHIYGCIKASGVNYDG 3788
Query: 894 KTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKT 953
KTNGITAPN SQ ELI+++Y+K+ +NP DI Y++ H TG+ LGDP+E+ AL VF T
Sbjct: 3789 KTNGITAPNPFSQAELIENIYEKNEINPLDIQYVMAHSTGSNLGDPLEVQALTSVFSKYT 3848
Query: 954 YNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 1013
++FC I+S K IGHTFAASG V+LI+++ ++K +IIPA+ HCE EN YI K SPF
Sbjct: 3849 KQKQFCMISSIKPLIGHTFAASGTVALISMLMAMKNQIIPATHHCESENPYIPFKESPFV 3908
Query: 1014 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVV 1073
+ K N+ W N+K R+G +S G+SGTNAH V++EYI + + + + +P + V
Sbjct: 3909 LCKENRSWIKKNQKPRMGTISTTGISGTNAHAVIEEYIPDDQPSTQRH---QGSP-QIFV 3964
Query: 1074 LSAKTKISLKEKMKQILLFLRKNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKII 1133
+SA+ L++ +++ +L +N+ + + + YTL GR + R AI+ ++ E++V+ +
Sbjct: 3965 ISAQNDDRLQDAACRMIAYLEQNHNLSLPDVAYTLQVGRKAMEARLAIVANNQEQLVRKL 4024
Query: 1134 --------NDTLNSKEKILHTNYLKGI 1152
N ++ +++ L+T Y +GI
Sbjct: 4025 KEYVEAMKNGGVSGQQRSLYTGYTEGI 4051
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|O31782|PKSN_BACSU Polyketide synthase PksN OS=Bacillus subtilis (strain 168) GN=pksN PE=1 SV=3 | Back alignment and function description |
|---|
Score = 540 bits (1390), Expect = e-152, Method: Composition-based stats.
Identities = 319/968 (32%), Positives = 524/968 (54%), Gaps = 69/968 (7%)
Query: 209 YGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTN-LILS 267
Y NDL Q++ + I + + G YLITGG G LG +F+ + + LIL+
Sbjct: 3658 YINDLDEMQIDDREISMP------WRDKGVYLITGGAGGLGFIFAKEIARQAEQPVLILT 3711
Query: 268 GRSKLNS---IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGIS 324
GRS LN+ +L++ +A Y QVDV+ I SI ++ ++GV+H AG+
Sbjct: 3712 GRSALNADQQAELNELQQLGARAEYRQVDVTQTEAASELITSITSDYEDLNGVIHSAGL- 3770
Query: 325 GLTSN-ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD 383
+ N ++ + VL+ K+ G + ++ A E+ LDF FSS S++ G
Sbjct: 3771 -IKDNYLMSKTNEELTQVLAPKVKGLVNVDEATEHL-------ALDFFILFSSISSVAGS 3822
Query: 384 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS 443
G DYAM N F YA Y N + ++INWPLW + N E + K+
Sbjct: 3823 AGQADYAMANAFMDSYAAYRNALVTAMYRHGQTLSINWPLWKEGGMR-ANKEIENMTLKN 3881
Query: 444 SKQKVLHENDGLKLFEQLLIQDKIQYLVLSG----ELEKLNQI-------INNIAPKVSE 492
+ + G++ + L K Q +V+ G EKL Q + + +V+
Sbjct: 3882 TGVTPMRTETGIQALYKGLAFGKDQVIVMEGFKDMMREKLTQKPSSDDVPMKTVQVRVTS 3941
Query: 493 NKKINNFNIEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYS 552
+++ N+ I+ +K I +L K EI + YGFDSI+L EF+ L++
Sbjct: 3942 EARMDQGNMFDHIQEVLKQTISQLLKIKPEEIDPDMEFNQYGFDSITLTEFANTLNEKCK 4001
Query: 553 LDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYEN 612
LD+ P++FF ++T+ Y + Y N + +T +K ++ + +N +N
Sbjct: 4002 LDLTPTVFFEHATVYAFAGYLSEE--------YPNAFTAQTPAKAEVLM--QPVEQNIKN 4051
Query: 613 V--SKKSNFILNKNTDINSE-----ELIAIIGMSGRFPAARNINEFWKILINNKDVISEI 665
+ S ++ F+ T + E E IAI+GMSG FP A+++ E+WK L + D I+E+
Sbjct: 4052 MTFSTENRFVKPSVTPMQKEADHKPEPIAIVGMSGVFPKAKDVEEYWKNLSSGADCITEV 4111
Query: 666 PEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQE 725
P+ +DW+ YY +P+K +NK N KW G I + +FDPLFF ISPLEAE+M+P+QR L+
Sbjct: 4112 PKDRWDWQEYYGDPLKEANKTNVKWGGFIDEVADFDPLFFGISPLEAEQMEPQQRLLMTY 4171
Query: 726 SWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSA-----RLAY 780
+W A+E+AG+ +A K G+F+G + Y L V++ + A +S R++Y
Sbjct: 4172 AWKAVEEAGHSARSLAGTKTGIFIGTGN-TGYSSLLSNVDIEGSAAANMSPSAGPNRVSY 4230
Query: 781 FMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGML 840
F+++ GP I+TACSSSLVA H A ++ C+ AI+ GVN +++P+ +IA AG L
Sbjct: 4231 FLNIHGPSEPIDTACSSSLVAIHHAVCAIENGNCEMAIAGGVNTVVTPQGHIAYDKAGAL 4290
Query: 841 SPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITA 900
S +G+C F ++A+G SE + LK+L+ A DGD I+ +I+GS +N+ G+ N +T
Sbjct: 4291 SKEGRCKTFSDKADGFAVSEGAGILFLKKLTAAERDGDHIYGVIKGSAVNHGGRANSLTT 4350
Query: 901 PNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFK-------NKT 953
PN +Q +++K+ Y+K+ ++P + YI HGTGT+LGDPVEIN L FK +
Sbjct: 4351 PNPKAQADVVKTAYEKAGIDPRTVTYIEAHGTGTELGDPVEINGLKAAFKELYEKTGDPA 4410
Query: 954 YNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 1013
+ C + S K+NIGH A+G+ +I ++ +K+K + SL+ E N YI L +SPFY
Sbjct: 4411 VHGSHCGLGSAKTNIGHLSLAAGVAGVIKVLLQLKHKTLVKSLYSETVNPYIRLDDSPFY 4470
Query: 1014 INKSNKKWNTVNEKL-----RIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNP 1068
I + +++W + ++ R +S+FG+ G NAH+V++EYI + +++
Sbjct: 4471 IVQESREWQALRDEAGRELPRRAGISSFGIGGVNAHVVIEEYIPKETTHPATAPAVTAQH 4530
Query: 1069 YHMVVLSAKTKISLKEKMKQILLFLRKNNTVC--IENFVYTLMQGRHHFQYRCAIIISSI 1126
+ +LSAK + LK++ +Q+ F+ K + + + YTL +GR + R II S
Sbjct: 4531 PGIFILSAKDEDRLKDQARQLADFISKRSITARDLTDIAYTLQEGRDAMEERLGIIAVST 4590
Query: 1127 EEVVKIIN 1134
++++ +N
Sbjct: 4591 GDLLEKLN 4598
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q05470|PKSL_BACSU Polyketide synthase PksL OS=Bacillus subtilis (strain 168) GN=pksL PE=1 SV=3 | Back alignment and function description |
|---|
Score = 482 bits (1240), Expect = e-135, Method: Composition-based stats.
Identities = 316/963 (32%), Positives = 500/963 (51%), Gaps = 80/963 (8%)
Query: 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTN---LILSGRSKLNSIIYKKLKKFNN---KA 287
K G YLITGG G LG +F+ + N+ TN +IL+GRS L+ KKLK +A
Sbjct: 1518 KDKGVYLITGGAGGLGFIFATEIANQ--TNDAVVILTGRSPLDERKKKKLKALQKLGIQA 1575
Query: 288 IYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSN-ILEANYKNFYSVLSSKI 346
IY Q D++DK + + + N G +DG++H AG+ + N I++ + +VL+ K+
Sbjct: 1576 IYRQADLADKQTVDALLKETQNVYGDLDGIIHSAGL--IKDNFIMKKKKEEVQTVLAPKV 1633
Query: 347 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNK 406
+G I L+ A ++ LDF FSS + +G G DYAM N F +++Y N +
Sbjct: 1634 AGLIHLDEATKDI-------PLDFFILFSSGAGAVGSAGQADYAMANAFMNAFSEYRNGQ 1686
Query: 407 NIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHEND-GLKLFEQLLIQD 465
K K +++ WPLW + +I + +T K V E D G++
Sbjct: 1687 AELHKRYGKTLSVCWPLWKDGGMQI--DAETARMLKRETGMVAMETDRGIQALYHGWTSG 1744
Query: 466 KIQYLVLSGELEKLNQII------------------NNIAPKVSENKKINNFNIEKFIEN 507
K Q LV SG +++ + N A K +I+ + + EN
Sbjct: 1745 KPQVLVASGVTDRIRAFLHETGHGKGQSHNIKKSSLNQEAEKADMIGEIDEEILREKAEN 1804
Query: 508 DIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLE 567
K + +++ +I L DYG DSI + + L K + + ++FF Y +
Sbjct: 1805 YFKQVLSSVIKLPAGQIDAEAPLEDYGIDSIMIMHVTGQLEKVFG-SLSKTLFFEYQDIR 1863
Query: 568 RLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKI-NENYENVSKKSNFI-----L 621
L YFI + ++ L E+ S+ ++ + + +KS F+
Sbjct: 1864 SLTRYFIDSRREKLLDI------LGFETGKPSVERKSEPEKQEIPVIPRKSGFLPLQDKE 1917
Query: 622 NKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIK 681
K E IAIIG+SGR+P A NI+E W+ L + +D I+EIP +D LYY+
Sbjct: 1918 QKQVREKETEEIAIIGISGRYPQADNIDELWEKLRDGRDCITEIPADRWDHSLYYDEDKD 1977
Query: 682 SSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIA 741
K SKW G + +D+FDP FF ISP EA+ MDP++R LQ + +EDAGY +
Sbjct: 1978 KPGKTYSKWGGFMKDVDKFDPQFFHISPREAKLMDPQERLFLQCVYETMEDAGYTREHLG 2037
Query: 742 NQKIGMFVGV---------EE----GSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPV 788
++ G EE G+ Q R + LT ++I + R++Y+ D GP
Sbjct: 2038 RKRDAELGGSVGVYVGVMYEEYQLYGAQEQVRGRSLALTGNPSSI-ANRVSYYFDFHGPS 2096
Query: 789 MAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYV 848
+A++T CSSSL A H+ACQSL++ EC+ A + GVN+ I P Y+ + +S G+C
Sbjct: 2097 IALDTMCSSSLTAIHLACQSLQRGECEAAFAGGVNVSIHPNKYLMLGQNKFMSSKGRCES 2156
Query: 849 FDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTE 908
F + +G VP E V AV+LK LS+A+ DGD I+ II+G+ IN+ GKTNG + PN +Q +
Sbjct: 2157 FGQGGDGYVPGEGVGAVLLKPLSKAVEDGDHIYGIIKGTAINHGGKTNGYSVPNPNAQAD 2216
Query: 909 LIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNI 968
+IK + ++ ++P ++YI HGTGT LGDP+EI L VF +T +++FCAI S KSNI
Sbjct: 2217 VIKKAFVEAKVDPRTVSYIEAHGTGTSLGDPIEITGLSKVFTQETDDKQFCAIGSAKSNI 2276
Query: 969 GHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWN----TV 1024
GH +A+G+ + ++ +KY+ + SLH N I NSPF + + ++W +V
Sbjct: 2277 GHCESAAGIAGVTKVLLQMKYRQLAPSLHSNVLNPNIDFLNSPFKVQQELEEWKRPIISV 2336
Query: 1025 N----EKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKI 1080
N E RI VS+FG G NAHI+++EY + ++ P ++VLSAK +
Sbjct: 2337 NGKDIELPRIAGVSSFGAGGVNAHILIEEYAP---EPVEERLPARKQP-AVIVLSAKNEE 2392
Query: 1081 SLKEKMKQILLFLRKNNTV--CIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLN 1138
L+++ +++L +R+ V + YTL GR + R A + +++E+ + + + ++
Sbjct: 2393 RLQKRAERLLHAIREQTYVEADLHRIAYTLQVGREAMKERLAFVAETMQELEEKLYECIS 2452
Query: 1139 SKE 1141
E
Sbjct: 2453 GTE 2455
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|P40806|PKSJ_BACSU Polyketide synthase PksJ OS=Bacillus subtilis (strain 168) GN=pksJ PE=1 SV=3 | Back alignment and function description |
|---|
Score = 442 bits (1138), Expect = e-123, Method: Composition-based stats.
Identities = 250/713 (35%), Positives = 399/713 (55%), Gaps = 41/713 (5%)
Query: 457 LFEQLLIQDKIQYLVLSGELEKLNQIINNIAPKVSENKKINNFNIEKFIENDIKNHICNI 516
FE +Q +Y+V + + E N A ++++ N + +E + N + I
Sbjct: 3171 FFEYGSVQSLAEYVVAAYQGE-----WNQDATAKGKDERTNLVHSLSSLEASLSNMVSAI 3225
Query: 517 LNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576
L +I N L++YGFDS++ F+ +++ + L++ P+IFF Y +L L Y
Sbjct: 3226 LKVNSEDIDVNTELSEYGFDSVTFTVFTNKINEEFQLELTPTIFFEYGSLHSLAEYLTVE 3285
Query: 577 HNNTMIKFYRN---KYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDINSEELI 633
H +T+++ + L+T+S + + + + K+ + D E +
Sbjct: 3286 HGDTLVQEREKPEGQEELQTKSSEAPKITSRRKRRFTQPIIAKAERNKKQAADF---EPV 3342
Query: 634 AIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGS 693
AI+G+SGRFP A +I+EFWK L KD I+E+P+ +DW+ +Y NP NK + KW G
Sbjct: 3343 AIVGISGRFPGAMDIDEFWKNLEEGKDSITEVPKDRWDWREHYGNPDTDVNKTDIKWGGF 3402
Query: 694 IPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEE 753
I G+ EFDPLFF ISP EA+ +DP+QR L+ W ALEDAG P ++ G+F+G
Sbjct: 3403 IDGVAEFDPLFFGISPREADYVDPQQRLLMTYVWKALEDAGCSPQSLSGTGTGIFIGTGN 3462
Query: 754 GSNYQDRLDQVNL-----TSTHNAILSA---RLAYFMDLKGPVMAINTACSSSLVATHIA 805
+ Y+D + NL +T + I S R++YF+++ GP + TACSSSLVA H A
Sbjct: 3463 -TGYKDLFHRANLPIEGHAATGHMIPSVGPNRMSYFLNIHGPSEPVETACSSSLVAIHRA 3521
Query: 806 CQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAV 865
+++ +C+ AI+ GVN +++ EA+I+ + AGMLS DG+C F ANG V E V V
Sbjct: 3522 VTAMQNGDCEMAIAGGVNTILTEEAHISYSKAGMLSTDGRCKTFSADANGYVRGEGVGMV 3581
Query: 866 VLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDIN 925
+LK+L A DG+ I+ +IRG+ N+ G+ N +T+PN +Q +L+ Y++++++P +
Sbjct: 3582 MLKKLEDAERDGNHIYGVIRGTAENHGGRANTLTSPNPKAQADLLVRAYRQADIDPSTVT 3641
Query: 926 YIITHGTGTKLGDPVEINALHDVFKNKTYNQ---------KFCAITSNKSNIGHTFAASG 976
YI HGTGT+LGDP+EIN L FK + + C I S KSNIGH A+G
Sbjct: 3642 YIEAHGTGTELGDPIEINGLKAAFKELSNMRGESQPDVPDHRCGIGSVKSNIGHLELAAG 3701
Query: 977 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTV-----NEKLRIG 1031
+ LI ++ +K+K + SLHCE N Y+ L +SPFYI + ++W +V NE R
Sbjct: 3702 ISGLIKVLLQMKHKTLVKSLHCETLNPYLQLTDSPFYIVQEKQEWKSVTDRDGNELPRRA 3761
Query: 1032 AVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILL 1091
+S+FG+ G NAHIV++EY+ N+ ++ +++VLSAK K L ++ Q+L
Sbjct: 3762 GISSFGIGGVNAHIVIEEYMPK-----ANSEHTATEQPNVIVLSAKNKSRLIDRASQLLE 3816
Query: 1092 FLR--KNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEK 1142
+R K + YTL GR R A + +++E+ + + ++ KE+
Sbjct: 3817 VIRNKKYTDQDLHRIAYTLQVGREEMDERLACVAGTMQELEEKLQAFVDGKEE 3869
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|O31784|PKSR_BACSU Polyketide synthase PksR OS=Bacillus subtilis (strain 168) GN=pksR PE=1 SV=2 | Back alignment and function description |
|---|
Score = 362 bits (930), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 207/662 (31%), Positives = 349/662 (52%), Gaps = 41/662 (6%)
Query: 492 ENKKINNFNIEKFIENDIKNHIC-NILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKF 550
+NK I N++ I + + + + N+ + K I K ++ D+G DS L +R +
Sbjct: 1400 QNKAIKASNLKARIRSYVTDKLAVNMADPSKLSIAK-AHIMDFGIDSSQLVALTREMEAE 1458
Query: 551 YSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENY 610
+++ P++FF Y T++ LI +F H + + + + + E + I K Y
Sbjct: 1459 TKIELNPTLFFEYPTIQELIDFFADKHEASFAQLFGEAH--QQEERPAQIENQMKQIPAY 1516
Query: 611 ENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIF 670
E + K T ++ + IAIIGMSG+FP A ++ EFW L+ K+ +SE+P++ +
Sbjct: 1517 ETNTDK--------TIEHAADGIAIIGMSGQFPKANSVTEFWDNLVQGKNCVSEVPKERW 1568
Query: 671 DWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLAL 730
DW+ Y + + + +W G I GI EFDPLFF ISP EA MDP++ LL +W A+
Sbjct: 1569 DWRKYAAADKEGQSSL--QWGGFIEGIGEFDPLFFGISPKEAANMDPQEFLLLIHAWKAM 1626
Query: 731 EDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMA 790
EDAG ++++ G+FV T+ +++ R++Y +D+KGP
Sbjct: 1627 EDAGLTGQVLSSRPTGVFVAAGNTD-----------TAVVPSLIPNRISYALDVKGPSEY 1675
Query: 791 INTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFD 850
ACSS+LVA H A QS+R EC+ AI VNL++SP+ +I S G LS G+ F
Sbjct: 1676 YEAACSSALVALHRAIQSIRNGECEQAIVGAVNLLLSPKGFIGFDSMGYLSEKGQAKSFQ 1735
Query: 851 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELI 910
ANG V SE +++K L +A+ D D I+++I+GSG+++ G+ + APN + +
Sbjct: 1736 ADANGFVRSEGAGVLIIKPLQKAIEDSDHIYSVIKGSGVSHGGRGMSLHAPNPAGMKDAM 1795
Query: 911 KSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHD-------VFKNKTYNQKFCAITS 963
Y+ + ++P+ + YI HG + L D +EI AL + + C I+S
Sbjct: 1796 LKAYQGAQIDPKTVTYIEAHGIASPLADAIEIEALKSGCSQLELELPQEVREEAPCYISS 1855
Query: 964 NKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNT 1023
K +IGH SG+ +L+ + ++K++ IP N+ + LK + F + N++W
Sbjct: 1856 LKPSIGHGELVSGMAALMKVSMAMKHQTIPGISGFSSLNDQVSLKGTRFRVTAENQQWRD 1915
Query: 1024 VNEKL-----RIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKT 1078
+++ R +++++ G NAH++L+EYI K +S N H+VVLSAK
Sbjct: 1916 LSDDAGKKIPRRASINSYSFGGVNAHVILEEYIPLP----KPPVSMSENGAHIVVLSAKN 1971
Query: 1079 KISLKEKMKQILLFLRKNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLN 1138
+ LK +Q L ++ K + ++++ YTL GR + R A+++ S EE+V + L
Sbjct: 1972 QDRLKAIAQQQLDYVNKQQELSLQDYAYTLQTGREEMEDRLALVVRSKEELVIGLQACLA 2031
Query: 1139 SK 1140
K
Sbjct: 2032 EK 2033
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q9R9J1|MYCA_BACIU Mycosubtilin synthase subunit A OS=Bacillus subtilis GN=mycA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 359 bits (921), Expect = 8e-98, Method: Composition-based stats.
Identities = 221/655 (33%), Positives = 346/655 (52%), Gaps = 62/655 (9%)
Query: 505 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYS 564
IE + + +++ KK I+ N + D G S+ L++ + + + + ++ + F+Y
Sbjct: 583 IETALLSIFSEVMDGKK--IHLNDHYFDMGATSLQLSQIAERIEQKFGCELTVADLFTYP 640
Query: 565 TLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKN 624
++ L + ++NH+ IK P ++ SK+I
Sbjct: 641 SIADLAAFLVENHSE--IKQTDTAKPSRSSSKDI-------------------------- 672
Query: 625 TDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSN 684
AIIGMS P A N ++FW +L N + I E P + Y IKS
Sbjct: 673 ---------AIIGMSLNVPGASNKSDFWHLLENGEHGIREYPAPRVKDAIDYLRSIKSER 723
Query: 685 KINSKWY---GSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIA 741
N K + G + ID FD FF ++P A+ MDP QR LQ +W A+EDAGY + I+
Sbjct: 724 --NEKQFVRGGYLDEIDRFDYSFFGLAPKTAKFMDPNQRLFLQSAWHAIEDAGYAGDTIS 781
Query: 742 NQKIGMFVGVEE-GSNYQDRLDQVNLTSTHN-------AILSARLAYFMDLKGPVMAINT 793
++G++VG + G +Y+ L H+ ++L++R+AYF++LKGP + ++T
Sbjct: 782 GSQLGVYVGYSKVGYDYERLLSANYPEELHHYIVGNLPSVLASRIAYFLNLKGPAVTVDT 841
Query: 794 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERA 853
ACSSSLVA H+AC++L +C+ A++ G+ + P M S DG F + +
Sbjct: 842 ACSSSLVAVHMACKALLTGDCEMALAGGIRTSLLP----MRIGLDMESSDGLTKTFSKDS 897
Query: 854 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSV 913
+G E V AV+LK L A+ DGD I+ +I+GS IN DG T GITAP+ +QTE+I+
Sbjct: 898 DGTGSGEGVAAVLLKPLQAAIRDGDHIYGVIKGSAINQDGTTVGITAPSPAAQTEVIEMA 957
Query: 914 YKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFA 973
+K + + PE +++I HGTGTKLGDPVE N L F+ T ++FCAI S K+NIGH F
Sbjct: 958 WKDAGIAPETLSFIEAHGTGTKLGDPVEFNGLCKAFEKVTEKKQFCAIGSVKANIGHLFE 1017
Query: 974 ASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV 1033
A+G+V LI + +K IP H K N I +SPFY+N+ + + LR G +
Sbjct: 1018 AAGIVGLIKSALMLNHKKIPPLAHFNKPNPLIPFHSSPFYVNQEVMDFTPEDRPLR-GGI 1076
Query: 1034 SAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFL 1093
S+FG SGTNAH+VL+EY + ++ N H+ VLSA T+ SL E Q ++
Sbjct: 1077 SSFGFSGTNAHVVLEEYTPESEYAPED-----GNDPHLFVLSAHTEASLYELTHQYRQYI 1131
Query: 1094 RKNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILHTNY 1148
++ + + YT GR H Y A+I+SS +E++ + + + + ++
Sbjct: 1132 SDDSQSSLRSICYTASTGRAHLDYCLAMIVSSNQELIDKLTSLIQGERNLPQVHF 1186
|
This protein is a multifunctional enzyme, able to activate a long chain fatty acid and link it with the amino acid Asn as part of the synthesis of mycosubtilin. The activation sites consist of individual domains. Bacillus subtilis (taxid: 1423) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q03133|ERYA3_SACER Erythronolide synthase, modules 5 and 6 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=4 | Back alignment and function description |
|---|
Score = 352 bits (902), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 241/963 (25%), Positives = 445/963 (46%), Gaps = 105/963 (10%)
Query: 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN----SIIYKKLKKFNNKAIYIQV 292
GT L+TGGTG +G + +L + +L+L GR + S + ++L
Sbjct: 1117 GTVLVTGGTGGIGAHLARWLARSGAEHLVLLGRRGADAPGASELREELTALGTGVTIAAC 1176
Query: 293 DVSDKLKMISEINSIINNIG-PIDGVLHIAGISGLTS--NILEANYKNFYSVLSSKISGT 349
DV+D+ ++ + + + G + V+H AG+S T ++ EA + V K+ GT
Sbjct: 1177 DVADRARLEAVLAAEAAAEGRTVSAVMHAAGVSTSTPLDDLTEAEFTEIADV---KVRGT 1233
Query: 350 IALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIY 409
+ L+ + LD FSS++ + G G YA N F +A+ ++
Sbjct: 1234 VNLDELCPD---------LDAFVLFSSNAGVWGSPGLASYAAANAFLDGFARAARSEGA- 1283
Query: 410 KKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ-DKIQ 468
+ +I W LW ++ Y +S + + + + E+L I D Q
Sbjct: 1284 -----PVTSIAWGLWAGQNMA---GDEGGEYLRSQGLRAMDPD---RAVEELHITLDHGQ 1332
Query: 469 YLVLSGELEKLN-----------QIINNIAPKVSENKKIN--------------NFNIEK 503
V ++++ + + IA +E ++ + +
Sbjct: 1333 TSVSVVDMDRRRFVELFTAARHRPLFDEIAGARAEARQSEEGPALAQRLAALLCDGRERE 1392
Query: 504 FIENDIKNHICNILN-TKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFS 562
+ + I+ + +L + I +++ D GFDS++ + L+ + ++ F
Sbjct: 1393 HLAHLIRAEVAAVLGHGDDAAIDRDRAFRDLGFDSMTAVDLRNRLAAVTGVREAATVVFD 1452
Query: 563 YSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILN 622
+ T+ RL ++++ ++ E ++++ ++
Sbjct: 1453 HPTITRLADHYLE-----------------------------RLVGAAE--AEQAPALVR 1481
Query: 623 KNTDINSEELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIP-EKIFDWKLYYENPI 680
+ ++++ IAI+GM+ RFP N E W+ ++ D ++E+P ++ +D ++
Sbjct: 1482 EVPPKDADDPIAIVGMACRFPGGVHNPGELWEFIVGGGDAVTEMPTDRGWDLDALFDPDP 1541
Query: 681 KSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI 740
+ S+ + G +FD FF ISP EA MDP+QR +L+ +W E+AG P+ +
Sbjct: 1542 QRHGTSYSRHGAFLDGAADFDAAFFGISPREALAMDPQQRQVLETTWELFENAGIDPHSV 1601
Query: 741 ANQKIGMFVGVEEGSNYQDRLDQVN-----LTSTHNAILSARLAYFMDLKGPVMAINTAC 795
G+F+G QD + + LT +A++S R+AY + L+GP + ++TAC
Sbjct: 1602 RGSDTGVFLGAAYQGYGQDAVVPEDSEGYLLTGNSSAVVSGRVAYVLGLEGPAVTVDTAC 1661
Query: 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANG 855
SSSLVA H AC SLR +C A++ GV++M PE + + G L+ DG+C F A+G
Sbjct: 1662 SSSLVALHSACGSLRDGDCGLAVAGGVSVMAGPEVFTEFSRQGGLAVDGRCKAFSAEADG 1721
Query: 856 LVPSEAVVAVVLKRLSRALSDGD-PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVY 914
E V V L+RLS ++G + ++ GS IN DG TNG+ AP+G++Q +I+ +
Sbjct: 1722 FGLPEGVAVVQLQRLSDGPAEGGRQVLGVVAGSAINQDGATNGLAAPSGVAQQRVIRKAW 1781
Query: 915 KKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAA 974
++ + D+ + HGTGT+LGDPVE +AL + + + S KSNIGH AA
Sbjct: 1782 ARAGITGADVAVVEAHGTGTRLGDPVEASALLATYGKSRGSSGPVLLGSVKSNIGHAQAA 1841
Query: 975 SGLVSLINLVQSIKYKIIPASLHCEKENNYII-LKNSPFYINKSNKKWNTVNEKLRIGAV 1033
+G+ +I +V + ++P L C E + +I + + ++ W + +R V
Sbjct: 1842 AGVAGVIKVVLGLNRGLVPPML-CRGERSPLIEWSSGGVELAEAVSPWPPAADGVRRAGV 1900
Query: 1034 SAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHM-VVLSAKTKISLKEKMKQILLF 1092
SAFG+SGTNAH+++ E + + + V+LSA+T+ +L + + LL
Sbjct: 1901 SAFGVSGTNAHVIIAEPPEPEPLPEPGPVGVLAAANSVPVLLSARTETALAAQAR--LLE 1958
Query: 1093 LRKNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEV---VKIINDTLNSKEKILHTNYL 1149
+++V + L GR H R A++ E++ ++ + + + + T
Sbjct: 1959 SAVDDSVPLTALASALATGRAHLPRRAALLAGDHEQLRGQLRAVAEGVAAPGATTGTASA 2018
Query: 1150 KGI 1152
G+
Sbjct: 2019 GGV 2021
|
Saccharopolyspora erythraea (taxid: 1836) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 EC: 4 |
| >sp|Q10977|PPSA_MYCTU Phthiocerol synthesis polyketide synthase type I PpsA OS=Mycobacterium tuberculosis GN=ppsA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 346 bits (887), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 191/557 (34%), Positives = 288/557 (51%), Gaps = 51/557 (9%)
Query: 506 ENDIKNHICNILNT----KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFF 561
E D+++ + + L T E+ + +LAD G S S LS+ + P F+
Sbjct: 8 EADLRHWLIDYLVTNIGCTPDEVDPDLSLADLGVSSRDAVVLSGELSELLGRTVSPIDFW 67
Query: 562 SYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFIL 621
+ T+ L Y S S+ +
Sbjct: 68 EHPTINALAAYLAAPEP-----------------------------------SPDSDAAV 92
Query: 622 NKNTDINSEELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPI 680
+ + +E IA++GM RFP + E W L + IS++P + W+ + P
Sbjct: 93 KRGARNSLDEPIAVVGMGCRFPGGISCPEALWDFLCERRSSISQVPPQ--RWQPFEGGPP 150
Query: 681 KSSNKI--NSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPN 738
+ + + ++W +P ID FD FFEISP EA++MDP+QR LL+ +W ALE AG P
Sbjct: 151 EVAAALARTTRWGSFLPDIDAFDAEFFEISPSEADKMDPQQRLLLEVAWEALEHAGIPPG 210
Query: 739 QIANQKIGMFVGV---EEGSNYQDRLDQVNLTSTHN---AILSARLAYFMDLKGPVMAIN 792
+ G+F G E G+ L QV+ S +I++ RL+YF+DL+GP +A++
Sbjct: 211 TLRRSATGVFAGACLSEYGAMASADLSQVDGWSNSGGAMSIIANRLSYFLDLRGPSVAVD 270
Query: 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDER 852
TACSSSLVA H+ACQSLR +C AI+AGVNL++SP + G LSP G+C FD
Sbjct: 271 TACSSSLVAIHLACQSLRTQDCHLAIAAGVNLLLSPAVFRGFDQVGALSPTGQCRAFDAT 330
Query: 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKS 912
A+G V E VVLKRL+ A DGD + A+I GS +N DG++NG+ APN +Q ++++
Sbjct: 331 ADGFVRGEGAGVVVLKRLTDAQRDGDRVLAVICGSAVNQDGRSNGLMAPNPAAQMAVLRA 390
Query: 913 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 972
Y + + P +++Y+ HGTGT LGDP+E AL V I S K+N+GHT
Sbjct: 391 AYTNAGMQPSEVDYVEAHGTGTLLGDPIEARALGTVLGRGRPEDSPLLIGSVKTNLGHTE 450
Query: 973 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGA 1032
AA+G+ I V ++++ IP + H E N +I + + + +W R G
Sbjct: 451 AAAGIAGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQTEWPATGHPRRAG- 509
Query: 1033 VSAFGMSGTNAHIVLQE 1049
VS+FG GTNAH+V+++
Sbjct: 510 VSSFGFGGTNAHVVIEQ 526
|
Involved in the elongation of either C22-24 fatty acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol derivatives. Mycobacterium tuberculosis (taxid: 1773) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q7TXM0|PPSA_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 344 bits (882), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 287/557 (51%), Gaps = 51/557 (9%)
Query: 506 ENDIKNHICNILNT----KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFF 561
E D+++ + + L T E+ + +LAD G S S LS+ + P F+
Sbjct: 8 EADLRHWLIDYLVTNIGCTPDEVDPDLSLADLGVSSRDAVVLSGELSELLGRTVSPIDFW 67
Query: 562 SYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFIL 621
+ T+ L Y S S+ +
Sbjct: 68 EHPTINALAAYLAA-----------------------------------PEPSPDSDAAV 92
Query: 622 NKNTDINSEELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPI 680
+ + +E IA++GM RFP + E W L + IS++P + W+ + P
Sbjct: 93 KRGARNSLDEPIAVVGMGCRFPGGISCPEALWDFLCERRSSISQVPPQ--RWQPFEGGPP 150
Query: 681 KSSNKI--NSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPN 738
+ + + ++W +P ID FD FFEISP EA++MDP+QR LL+ +W ALE AG P
Sbjct: 151 EVAAALARTTRWGSFLPDIDAFDAEFFEISPSEADKMDPQQRLLLEVAWEALEHAGIPPG 210
Query: 739 QIANQKIGMFVGV---EEGSNYQDRLDQVNLTSTHN---AILSARLAYFMDLKGPVMAIN 792
+ G+F G E G+ L QV+ S +I++ RL+YF+DL+GP +A++
Sbjct: 211 TLRRSATGVFAGACLSEYGAMASADLSQVDGWSNSGGAMSIIANRLSYFLDLRGPSVAVD 270
Query: 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDER 852
TACSSSLVA H+ACQSLR +C AI+AGVNL++SP + G LSP G+C FD
Sbjct: 271 TACSSSLVAIHLACQSLRTQDCHLAIAAGVNLLLSPAVFRGFDQVGALSPTGQCRAFDAT 330
Query: 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKS 912
A+G V E VVLKRL+ A DGD + A+I GS + DG++NG+ APN +Q ++++
Sbjct: 331 ADGFVRGEGAGVVVLKRLTDAQRDGDRVLAVICGSAVTQDGRSNGLMAPNPAAQMAVLRA 390
Query: 913 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 972
Y + + P +++Y+ HGTGT LGDP+E AL V I S K+N+GHT
Sbjct: 391 AYTNAGMQPSEVDYVEAHGTGTLLGDPIEARALGTVLGRGRPEDSPLLIGSVKTNLGHTE 450
Query: 973 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGA 1032
AA+G+ I V ++++ IP + H E N +I + + + +W R G
Sbjct: 451 AAAGIAGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQTEWPATGHPRRAG- 509
Query: 1033 VSAFGMSGTNAHIVLQE 1049
VS+FG GTNAH+V+++
Sbjct: 510 VSSFGFGGTNAHVVIEQ 526
|
Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively. Mycobacterium bovis (taxid: 1765) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q7TXL9|PPSB_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 332 bits (850), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 261/436 (59%), Gaps = 13/436 (2%)
Query: 622 NKNTDINSEELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPI 680
++ + I E +A++G+ RFP + E FW L+ ++ IS +P +D + +Y
Sbjct: 25 DRVSRIAVAEPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYHPDP 84
Query: 681 KSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI 740
+ ++ +KW G +P + FD FF I+P EA MDP+QR LL+ +W ALE AG P+ +
Sbjct: 85 LTPGRMTTKWGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPPDSL 144
Query: 741 ANQKIGMFVGVEEGSNYQDRL-------DQVNLTSTHNAILSARLAYFMDLKGPVMAINT 793
+ + +GV + YQ L D + T ++I R++Y + L+GP +A++T
Sbjct: 145 GGTRTAVMMGVYF-NEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAVDT 203
Query: 794 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERA 853
ACSSSLVA H+ACQSLR E D A++ GV++ + PE IA+++ G+LSP G+C FD A
Sbjct: 204 ACSSSLVAVHLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDAAA 263
Query: 854 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSV 913
+G V E VVLKRL+ A+ DGD + A++RGS +N DG++NG+TAPN +Q ++I
Sbjct: 264 DGFVRGEGAGVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIADA 323
Query: 914 YKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFA 973
+ ++ P+ +NY+ HGTGT LGDP+E AL + + CA+ + K+NIGH A
Sbjct: 324 LRSGDVAPDSVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHLEA 380
Query: 974 ASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV 1033
A+G+ I +++ IP +LH + N I ++ F++ N W T E R AV
Sbjct: 381 AAGIAGFIKATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTA-EGPRRAAV 439
Query: 1034 SAFGMSGTNAHIVLQE 1049
S+FG+ GTNAH+++++
Sbjct: 440 SSFGLGGTNAHVIIEQ 455
|
Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively. Mycobacterium bovis (taxid: 1765) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1152 | ||||||
| 44662946 | 8601 | mixed type I polyketide synthase/nonribo | 0.953 | 0.127 | 0.483 | 0.0 | |
| 423456310 | 1806 | hypothetical protein IEE_05053, partial | 0.943 | 0.601 | 0.476 | 0.0 | |
| 421078401 | 3436 | Beta-ketoacyl synthase [Pelosinus fermen | 0.944 | 0.316 | 0.430 | 0.0 | |
| 315647766 | 5441 | putative mixed polyketide synthase/non-r | 0.949 | 0.201 | 0.422 | 0.0 | |
| 117617418 | 5521 | BryB [Candidatus Endobugula sertula] | 0.940 | 0.196 | 0.447 | 0.0 | |
| 121624846 | 5511 | BryB [Candidatus Endobugula sertula] | 0.940 | 0.196 | 0.446 | 0.0 | |
| 345022635 | 2991 | DfnG [Ornithinibacillus scapharcae TW25] | 0.898 | 0.346 | 0.436 | 0.0 | |
| 387898997 | 3230 | Putative polyketide synthase, partial [B | 0.927 | 0.330 | 0.424 | 0.0 | |
| 394993052 | 2713 | DfnG, partial [Bacillus sp. 916] gi|3938 | 0.928 | 0.394 | 0.421 | 0.0 | |
| 121624850 | 4888 | BryA [Candidatus Endobugula sertula] | 0.937 | 0.220 | 0.421 | 0.0 |
| >gi|44662946|gb|AAS47564.1| mixed type I polyketide synthase/nonribosomal peptide synthetase [symbiont bacterium of Paederus fuscipes] | Back alignment and taxonomy information |
|---|
Score = 1068 bits (2763), Expect = 0.0, Method: Composition-based stats.
Identities = 561/1160 (48%), Positives = 769/1160 (66%), Gaps = 61/1160 (5%)
Query: 13 WVKSPLISLPISKVKKNNLLCFSSNKDFQNKIVESISSY---TDIIFIEQSDNIKISPND 69
W + PL + +VK LLC S+ + Q +I E S +IFIEQ D + D
Sbjct: 7103 WAEVPLAAPATDRVK--TLLCLCSDPEHQRRIAEQXDSRDPGVQLIFIEQGD--APAEPD 7158
Query: 70 TVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKKSK 129
+I+ + Y+ L I + ++D++ YLWP ED+ I N++P+++ LQA+ ++
Sbjct: 7159 EARQRIDPLQPSSYSRALTTIAKALGRVDALLYLWPCEDRRWISNVLPVLHLLQALYETG 7218
Query: 130 LYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIVFAEKITNFNIK- 188
L RKL++SG + + L C+ +SWVAFERSL ++MPETQ+++VF E+ +
Sbjct: 7219 LRPRKLLLSG-----EYADALERCHLDSWVAFERSLGVVMPETQVAVVFRERAADTGESS 7273
Query: 189 ---NWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGT 245
+W+ +L EL KL S Y +R+ I+ + + S KQGG YLITGG
Sbjct: 7274 PTWDWLEVLVAELFAEKLRSACYRQG--VRHVPLIRPLAWQPGSASPFKQGGVYLITGGG 7331
Query: 246 GRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEI 304
G LGM+ +++L Y+ L+LSGRS L + Y+ L+ + +Y+ DV+D M +
Sbjct: 7332 GGLGMIVAEHLATVYAARLVLSGRSSSLAAEKYELLQARGAQVLYVGADVTDVHAMQEVV 7391
Query: 305 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQ 364
+ + P++GVLHIAG++G T+ +L+A F VL +KI+G+ L+ L +
Sbjct: 7392 DQARRHFSPLNGVLHIAGLNG-TAEVLKAEADAFQRVLDAKITGSQVLDQVL-------R 7443
Query: 365 KNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424
+ LDF+CYF SSSAI+GDFGSCDYA+GNRFQ+ YA Y + K + INWPLW
Sbjct: 7444 RESLDFICYFCSSSAIIGDFGSCDYALGNRFQSAYALYRAQMVESSALSGKTLAINWPLW 7503
Query: 425 NNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQIIN 484
+ +G+ EQT FY +SS Q+ L + L L EQLL QD+ Q LV +G+ ++L + +N
Sbjct: 7504 QDGGLGVGDAEQTRFYLQSSGQRSLCSQEALALLEQLLTQDRAQCLVWAGQPDRLLRWVN 7563
Query: 485 N---------------IAPKVSENKKINN-FNIEKFIENDIKNHICNILNTKKSEIYKNK 528
A V+E ++ ++++ + D+K IC +L T+ +E+ +
Sbjct: 7564 QEPLEAATVTVPEPVRAAKAVAERAELGGGLDLQQCLLRDLKTKICELLGTQYNELENHA 7623
Query: 529 NLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNK 588
NL D+GFDSISLAEFSR+LS+FYSLDI PS+FFS+STL RL YF+ H T+ FY+
Sbjct: 7624 NLVDFGFDSISLAEFSRVLSRFYSLDISPSVFFSHSTLNRLTAYFLAEHRQTLEGFYQQP 7683
Query: 589 YPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDINS-----EELIAIIGMSGRFP 643
P E + +V +L T I S +E IAIIG+SGRFP
Sbjct: 7684 QPAGPEHAPVPTEVAQV------SVPVPVTALLPTGTSIGSASQGQDEPIAIIGLSGRFP 7737
Query: 644 AARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPL 703
AR I E W+IL +D I E+P FDW+ YY +P + +K NSKW G IPGI EFDPL
Sbjct: 7738 QARTIEELWRILEQGRDAIQEVPIDRFDWRSYY-SPSQEMSKSNSKWGGCIPGIAEFDPL 7796
Query: 704 FFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRL-D 762
FFEISPLEAERMDPRQRHL+QE+WLALEDAGYGP Q+ KI MFVGVEEG +YQ RL
Sbjct: 7797 FFEISPLEAERMDPRQRHLMQEAWLALEDAGYGPEQLECNKISMFVGVEEGCDYQRRLTQ 7856
Query: 763 QVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGV 822
Q +LTS HN IL++RLAYF++LKGPVMAINTACSS+LVA H ACQSLR ECDTAI+AGV
Sbjct: 7857 QTSLTSMHNGILASRLAYFLNLKGPVMAINTACSSALVAVHQACQSLRHGECDTAIAAGV 7916
Query: 823 NLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHA 882
NL+++PEAY+ MT AGMLSPDGKCYVFD+RANGLVP EAV VVLKRLS+AL+DGDPI A
Sbjct: 7917 NLLVAPEAYVGMTQAGMLSPDGKCYVFDKRANGLVPGEAVAVVVLKRLSKALADGDPIKA 7976
Query: 883 IIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEI 942
+IRGSGINYDGKTNGITAP+G SQTEL++ +Y++ L P+DI+YI+THGTGT+LGDP+EI
Sbjct: 7977 LIRGSGINYDGKTNGITAPSGASQTELLEGIYRQCALQPQDISYIVTHGTGTQLGDPIEI 8036
Query: 943 NALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKEN 1002
NAL+DVFK KT Q FCA+TS KSN+GHTFAASGLVSLI+LV +I+++ IP+SLHCE++N
Sbjct: 8037 NALYDVFKGKTDKQGFCALTSIKSNLGHTFAASGLVSLISLVLAIRHRTIPSSLHCEQKN 8096
Query: 1003 NYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNT 1062
+YI + SPFY+N K W + RIGAVSAFGMSGTNAH+V+QE+ + + +
Sbjct: 8097 DYIRWQESPFYVNTRKKHWECALGQPRIGAVSAFGMSGTNAHVVVQEH-----QPAEPSR 8151
Query: 1063 FISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCIENFVYTLMQGRHHFQYRCAII 1122
+ ++ PY++ V+SAKT+ +L+E+++Q +L ++ + E YTL++GRHHF+YRCAI+
Sbjct: 8152 WSTAAPYYLWVVSAKTETTLQEQIRQWEDYLSRHPDLDFEAVSYTLLKGRHHFKYRCAIV 8211
Query: 1123 ISSIEEVVKIINDTLNSKEK 1142
+ +V++ + L+ + +
Sbjct: 8212 AKDLSQVLQALRQALDRQTQ 8231
|
Source: symbiont bacterium of Paederus fuscipes Species: symbiont bacterium of Paederus fuscipes Genus: Family: Order: Class: Phylum: Superkingdom: Bacteria |
| >gi|423456310|ref|ZP_17433162.1| hypothetical protein IEE_05053, partial [Bacillus cereus BAG5X1-1] gi|401130743|gb|EJQ38403.1| hypothetical protein IEE_05053, partial [Bacillus cereus BAG5X1-1] | Back alignment and taxonomy information |
|---|
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/1143 (47%), Positives = 743/1143 (65%), Gaps = 56/1143 (4%)
Query: 21 LPISKVKKNNLLCFSSNKDFQNKIVES---ISSYTDIIFIEQSDNIKISPNDTVHYKINK 77
L S +K L+CF SN + Q ++++ + S T IIFI S + +Y + K
Sbjct: 471 LETSSIKGKTLVCFLSNLEKQQALLQTMKMLDSQTKIIFI--SSGMIYQKESQQNYSVVK 528
Query: 78 DNINDYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKKSKLYLRKLII 137
+ Y I + K+++V YLWPLED++ I + I + LQ + +KL +++++
Sbjct: 529 TKRSTYEEAFKNIVQDHGKVEAVLYLWPLEDRSYIEDYSCIFHILQTIASTKLKPKRVLL 588
Query: 138 SGISINKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIVFAEKITNFN-IKNWINILFK 196
+ E L CY SW+ FERS+ ++P TQ+S+++ E I+ W+ L+
Sbjct: 589 GA-----EFENGLDRCYLESWIGFERSIGFVLPNTQVSLIYQEAEGETGVIREWMMKLWA 643
Query: 197 ELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYL 256
ELQ K+ S++Y RY IK +++ K +K GGTYLITGG G LG LF+++L
Sbjct: 644 ELQTQKVQSVLYQKGK--RYVSQIKPTVVESGKG-IVKTGGTYLITGGLGGLGFLFAEHL 700
Query: 257 INKYSTNLILSGRSKLNSIIYKKLKKF---NNKAIYIQVDVSDKLKMISEINSIINNIGP 313
S NLIL+GRS L++ +K+K ++ +Y+Q D+ D M IN G
Sbjct: 701 AKTQSVNLILNGRSMLSAEKQEKIKALEALGSQVLYVQADICDMSGMKEGINRAKERFGS 760
Query: 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCY 373
I GV+H AGI G + NILE Y +F VL KI GT+ L+ L ++DF+CY
Sbjct: 761 IHGVIHAAGIVG-SPNILEKEYSSFQKVLDPKIQGTLILDELLRG-------EQIDFICY 812
Query: 374 FSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN 433
FSS+ A LGDFGSCDYA+GNRFQ YA Y N+ N INWPLW + I +
Sbjct: 813 FSSAVANLGDFGSCDYAIGNRFQMAYAHYRNHVQQLDGQQNNTFVINWPLWKDGGMNISD 872
Query: 434 NEQT-DFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQIINNIAPKVSE 492
+E T Y +SS Q+ L +GLKLF+Q+L Q++IQ LVL G+ ++ + + ++ K S
Sbjct: 873 DEHTTKMYLQSSGQRSLETEEGLKLFDQILGQNRIQNLVLVGQTSRMMEFLGSLITKSST 932
Query: 493 NKKINNF-----------NIEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLA 541
+ N+F NIE+ +E D+K HI +L ++ + +NL+D+GFDSISLA
Sbjct: 933 SVNSNHFGKGKRAEMKGLNIEQCLEWDLKEHISQLLKIPRNRLDLEENLSDFGFDSISLA 992
Query: 542 EFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISIL 601
EF+++L+ +Y +DI P++FF YST+ +LI +F + H+ + +FY + K I +
Sbjct: 993 EFAKLLTNYYGIDIKPALFFDYSTIRKLIQFFYQEHSEVVQEFYHVD---NVKEKVIPDV 1049
Query: 602 YDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDV 661
+ Y+ + + F++ + E IAIIGMSGRFP ARNINE WKIL KDV
Sbjct: 1050 PKKSVLSKYKRQGRTARFLVRDESKTIPEP-IAIIGMSGRFPQARNINEMWKILTEGKDV 1108
Query: 662 ISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRH 721
+ EIP + FDW+ YY N K N KW GSIPG+DEFDPLFFEISP EA+ MDPRQR
Sbjct: 1109 VQEIPPERFDWQKYYSNS-GEPGKTNGKWCGSIPGVDEFDPLFFEISPREAKSMDPRQRL 1167
Query: 722 LLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYF 781
LLQESW ALEDAGYG QI N +IGMFVGVE+G + D N+TS HNAIL+ARL+YF
Sbjct: 1168 LLQESWKALEDAGYGEKQIKNSQIGMFVGVEDGDYQRFAEDNGNVTSNHNAILAARLSYF 1227
Query: 782 MDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS 841
++L GP MAINTACSS LVA H AC SLR HECDTAI+AGVNL+ +PE+YI M+ GMLS
Sbjct: 1228 LNLNGPNMAINTACSSGLVAAHQACMSLRNHECDTAIAAGVNLIFTPESYIGMSEVGMLS 1287
Query: 842 PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP 901
DGKC+ FD+RANG+VP EAVVAVVLKRLS+A +DGDPI+A+I GSGINYDGKTNGITAP
Sbjct: 1288 SDGKCFAFDKRANGMVPGEAVVAVVLKRLSQAEADGDPIYAVIPGSGINYDGKTNGITAP 1347
Query: 902 NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAI 961
+G SQT L+KSVY + +NPE+I YI+THGTGTKLGDP+EINAL++ FK+ T Q +CAI
Sbjct: 1348 SGASQTNLLKSVYDQYQINPEEIEYIVTHGTGTKLGDPIEINALYNAFKDYTEKQGYCAI 1407
Query: 962 TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 1021
TS K+N GHT AASGLVSL++LVQ+ ++KIIPASLHC++EN+YI K SPFY+NK+NK W
Sbjct: 1408 TSTKTNFGHTLAASGLVSLVSLVQAFRHKIIPASLHCKQENDYINWKESPFYVNKANKLW 1467
Query: 1022 NTVNEKLRIGAVSAFGMSGTNAHIVLQEY---ISTNFKNIKNNTFISSNPYHMVVLSAKT 1078
NE+ R+GA+SAFGMSGTNAH+VLQ Y + T+FK PY+++ SAK+
Sbjct: 1468 PEKNEEKRMGAISAFGMSGTNAHMVLQSYNEEVDTSFK----------APYYLLAFSAKS 1517
Query: 1079 KISLKEKMKQILLFLR-KNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTL 1137
+ +L+EK+K ++ L+ K V + YTL++GRHHF +RCA++I E+ + ++N
Sbjct: 1518 QEALQEKIKDMMSVLQDKERQVDLSQISYTLLEGRHHFTHRCAVVIQDQEDAMYVLNQMK 1577
Query: 1138 NSK 1140
N +
Sbjct: 1578 NRE 1580
|
Source: Bacillus cereus BAG5X1-1 Species: Bacillus cereus Genus: Bacillus Family: Bacillaceae Order: Bacillales Class: Bacilli Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|421078401|ref|ZP_15539355.1| Beta-ketoacyl synthase [Pelosinus fermentans JBW45] gi|392523591|gb|EIW46763.1| Beta-ketoacyl synthase [Pelosinus fermentans JBW45] | Back alignment and taxonomy information |
|---|
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/1158 (43%), Positives = 726/1158 (62%), Gaps = 70/1158 (6%)
Query: 11 KVWVKSPLISLPISKVKKNNLLCFSSNKDFQNKIVESISSY---TDIIFIEQSDNIKISP 67
++W + L++ +K+K L+CF S + Q I+E I + T +I+I Q
Sbjct: 1081 EIWQEQALLTTTPTKIK--TLVCFISKPENQQTIMEEIENLDQETKVIYISQ--GTAFEK 1136
Query: 68 NDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKK 127
+Y + + +++ Y + I E ++D++ YLWP+ED +CI + ++Y LQA+
Sbjct: 1137 QSQQNYSVARTDLSTYKEAFDNIREDYSEVDAMLYLWPIEDSSCIQDYSSLVYILQAIAG 1196
Query: 128 SKLYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIVFAEKITN--- 184
SKL ++L+++G N+ L CY SW+ FE SL ++P Q++ V+ E
Sbjct: 1197 SKLNTKRLLLAGQFANR-----LERCYLESWIGFEISLEFVLPNMQVAAVYKEAYPENKE 1251
Query: 185 FNIKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGG 244
I++W+N ++ ELQ K+ S++Y G + ++ +S ++ GGTYLI GG
Sbjct: 1252 RAIRDWLNTIWTELQADKIQSVLYQGG---KRSVHRSQATAMQANSSLLRAGGTYLIVGG 1308
Query: 245 TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK---KFNNKAIYIQVDVSDKLKMI 301
G +G LF+ Y K+ NLIL+GRS N K+K ++ +YI+ DV D M
Sbjct: 1309 CGEIGFLFAKYFAQKHPVNLILTGRSPKNEDKQAKIKILEDLGSQIMYIEADVCDASGMK 1368
Query: 302 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTIL 361
++ G I GV+H A I S I E + + F V++ KI+GT+ L+ L
Sbjct: 1369 EGLSRAKERFGKIHGVIHAARIESKQS-IFEKDIQGFQQVIAPKITGTLVLDEVL----- 1422
Query: 362 KLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINW 421
+LDF+CYFSSSSAILGDFGSCDYA+GNRFQ YA Y + + K + INW
Sbjct: 1423 --AAEELDFICYFSSSSAILGDFGSCDYAIGNRFQMAYAHYRKEEQRH----GKTVVINW 1476
Query: 422 PLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQ 481
PLW + NE Y K+S Q+ L +G+ +FE +L Q + Q+LV+ G+ ++++
Sbjct: 1477 PLWKDFGMDADENEHIKMYLKTSGQRFLEAEEGVAIFEHILAQHQTQHLVVVGQRSRVHR 1536
Query: 482 IINN------------IAPKVSENK-KINNFNIEKFIENDIKNHICNILNTKKSEIYKNK 528
+ +P V + ++ + E+ +E D+K ++ +L + ++ +
Sbjct: 1537 FLGLAQNQSASSPQALTSPAVKGRRAEMIGLDAEQCLEWDLKEYVSKLLKISRDKLDREI 1596
Query: 529 NLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNK 588
NL D+GFDS+ L++F+++L+ Y ++I P+IFF Y T+E+LI YFI H + +N
Sbjct: 1597 NLVDFGFDSVGLSQFAKLLTSHYGIEISPAIFFGYFTIEKLIQYFITEHQ----ELIQNY 1652
Query: 589 YPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDINSE-ELIAIIGMSGRFPAARN 647
Y T ++IS + + ++ +KKS F N+N+ S E IAIIGMSGRFP ARN
Sbjct: 1653 YEEDTIQQSISQKVETIAVKPKQHRNKKSRF--NRNSASPSGLEPIAIIGMSGRFPDARN 1710
Query: 648 INEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEI 707
I+E WKI++ +DV+ E E F W + + SNK W IPG+ EFDPLFF I
Sbjct: 1711 IDEMWKIILEGQDVVKENSEDKF-WGMGF-----GSNKWKCGW---IPGVKEFDPLFFGI 1761
Query: 708 SPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLT 767
P EAE MDPRQR LLQESW ALEDAGYG +I N IGMFVGVE+G + ++ ++T
Sbjct: 1762 PPREAEMMDPRQRLLLQESWRALEDAGYGKERIKNSTIGMFVGVEDGDYHMLSNEKGSVT 1821
Query: 768 STHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS 827
S HN +L+ARLAYF++L GP MAINTACSS LVA H A QSLR ECDTAI+AG+NL+++
Sbjct: 1822 SNHNGVLAARLAYFLNLDGPNMAINTACSSGLVAAHQAYQSLRNQECDTAIAAGINLLLT 1881
Query: 828 PEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGS 887
P AM+ AGMLS DGKCY FD+RANG+VP EA+ VVLKRLS+A +DGDPI+A+I+GS
Sbjct: 1882 PGVLTAMSQAGMLSEDGKCYAFDKRANGMVPGEAIAVVVLKRLSKAQADGDPIYAVIKGS 1941
Query: 888 GINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHD 947
GINYDGKTNGIT P+G+SQ++L+KSVY ++ +NPE+I YI+THGTGTKLGDP+EINAL+D
Sbjct: 1942 GINYDGKTNGITVPSGVSQSKLLKSVYDRNKVNPEEIEYIVTHGTGTKLGDPIEINALYD 2001
Query: 948 VFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIIL 1007
VFK T Q +CA+TS K+N GHT AASGLVSLI++VQ+++Y+ IPASLHCE+EN+YI
Sbjct: 2002 VFKGYTKKQSYCALTSVKTNFGHTMAASGLVSLISMVQALRYETIPASLHCEQENDYINW 2061
Query: 1008 KNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSN 1067
+ SPFY+NK+NK W+ N K R G++SAFG+SGTN H+++Q Y +N +
Sbjct: 2062 QESPFYVNKTNKIWSKDNGKQRSGSISAFGLSGTNVHMIVQSY-----SEAENTASLEQM 2116
Query: 1068 PYHMVVLSAKTKISLKEKMKQILLFLRKNNT--VCIENFVYTLMQGRHHFQYRCAIIISS 1125
PY+++ SAKTK +L+EK++ ++ L+K + + YTL+QGR HF +RC +++
Sbjct: 2117 PYYLLAFSAKTKEALQEKIQDMIDVLQKKDAQEASLAELSYTLLQGRQHFNHRCVVVVQG 2176
Query: 1126 IEEVVKIINDTLNSKEKI 1143
E+ + + +N KE++
Sbjct: 2177 REDAIYALQQ-VNGKERL 2193
|
Source: Pelosinus fermentans JBW45 Species: Pelosinus fermentans Genus: Pelosinus Family: Veillonellaceae Order: Selenomonadales Class: Negativicutes Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|315647766|ref|ZP_07900867.1| putative mixed polyketide synthase/non-ribosomal peptide synthetase [Paenibacillus vortex V453] gi|315276412|gb|EFU39755.1| putative mixed polyketide synthase/non-ribosomal peptide synthetase [Paenibacillus vortex V453] | Back alignment and taxonomy information |
|---|
Score = 946 bits (2445), Expect = 0.0, Method: Composition-based stats.
Identities = 496/1174 (42%), Positives = 733/1174 (62%), Gaps = 80/1174 (6%)
Query: 11 KVWVKSPLISLPISKVKKNNLLCFSSNKDFQNKIVESISSY---TDIIFIEQSDNIKISP 67
+VW + L ++ K ++CF S Q K +E+ + T +IF+ +S +
Sbjct: 2030 EVWEEEVLTGTHNTETK--TMICFLSQHGSQQKFLETATGLGGDTHVIFVSRSTGF--AK 2085
Query: 68 NDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKK 127
N T Y I++ + Y L+ I E K+ID+V YLWP+ED + ++ +++ +QA+
Sbjct: 2086 NTTYDYTISETDRETYVQALSSIKEDFKEIDAVLYLWPMEDAIYVKDVSCVVHLIQAIAS 2145
Query: 128 SKLYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIVFAEKITNFNI 187
++L ++L+++G + E L CY SW FERSL +++P +S++ E +
Sbjct: 2146 ARLKPKRLLLAG-----QYENRLEQCYMESWTGFERSLGLVLPNISVSVISLESQAQPHE 2200
Query: 188 KNWINI---LFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGG 244
+W + L E+ + S+ Y R+ IK ++ + N +K GGTYL+TGG
Sbjct: 2201 VSWREVTQRLLAEISNNQATSVWYQKGK--RHVRQIKPTVMANGSN-MLKNGGTYLVTGG 2257
Query: 245 TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKA---IYIQVDVSDKLKMI 301
G LG+LF+ ++ +Y NLIL+GRS +N + +++ N+ +Y+Q D+ D M
Sbjct: 2258 CGGLGLLFARHMAERYGANLILTGRSPMNDEMRVSMEELKNRGGHVVYVQADICDAEGMR 2317
Query: 302 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTIL 361
+ + G I GV+H AG+S + NILE ++F+ +L+ K+ GT+AL L+
Sbjct: 2318 EGLAPAKDRFGAIHGVIHAAGMSS-SQNILEKEIEDFHKILAPKVEGTLALEALLQG--- 2373
Query: 362 KLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINW 421
+ +LDF+CYFSS+SA+LGDFGSCDYA+GNRFQ YA+Y N + + + + INW
Sbjct: 2374 ---EQQLDFICYFSSTSAVLGDFGSCDYAVGNRFQMAYARYRNEQ----RRSGRTFVINW 2426
Query: 422 PLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQ 481
PLW + + T+ Y KSS Q+ L +GL++FE++L Q+L+L G+ ++++
Sbjct: 2427 PLWKDGGMGFQDKANTELYLKSSGQRFLETEEGLQIFERILSNSHSQHLILVGQRSRVHR 2486
Query: 482 IIN------NIAPKVSENKKIN--------------NFNIEKFIENDIKNHICNILNTKK 521
+ I K E+K + ++E+ +E D+K + +L +
Sbjct: 2487 FLGLADRGAVIEAKEQESKTVQALSAPGRGWRSEMKGLSLEQCLERDLKEIVSQLLKIPR 2546
Query: 522 SEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTM 581
++ +NLA++GFDSI+LA+F+ L++ Y LDI PS+FF ST+ +LI YF+ H +
Sbjct: 2547 DKLDLEENLAEFGFDSINLAQFANALTEHYGLDITPSLFFGQSTIGKLIGYFLDEHKELV 2606
Query: 582 IKFYRN--------KYPL-KTESKNISI-LYDNKINENYENVSKKSNFILNKNTDINSEE 631
FY+ + PL ++ES+ + + + N+S + E
Sbjct: 2607 ADFYQEGQIEHTDLRQPLNRSESEQTAFKRARGSVRKAIPNLSPPA-----------MHE 2655
Query: 632 LIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWY 691
IAIIGMSGRFP ARNI+E W IL + +SE+P + FDW+ YY + + S +I+ KW
Sbjct: 2656 PIAIIGMSGRFPEARNIDEMWTILAEGRSAVSEVPVERFDWRKYYGDGEQESGQIHCKWC 2715
Query: 692 GSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV 751
G+IPG+ EFDP+FFEISP EA+ MDPRQR LLQESW ALEDAGYG +++ KIGMFVGV
Sbjct: 2716 GTIPGVSEFDPMFFEISPNEAKTMDPRQRLLLQESWKALEDAGYGEDRLGTGKIGMFVGV 2775
Query: 752 EEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQ 811
E+G + D+ +TS HNAIL+ARL+YF++L GP MAINTACSS LVA H AC SLR
Sbjct: 2776 EDGDYHLLVKDKGTITSNHNAILAARLSYFLNLSGPNMAINTACSSGLVAAHQACMSLRN 2835
Query: 812 HECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLS 871
ECDTAI AGVNL+++P+AY ++ AG+LS DGKCY FD RANG VP EAV +V KRLS
Sbjct: 2836 GECDTAIVAGVNLLLTPQAYAGISQAGILSADGKCYAFDNRANGTVPGEAVAVLVFKRLS 2895
Query: 872 RALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHG 931
+A +DGDPI A+IRGSG+NYDG+TNGITAP+G++Q++L++ +Y + +NPE+I YI+THG
Sbjct: 2896 QAEADGDPIQAVIRGSGVNYDGRTNGITAPSGVAQSKLLREIYAQYQINPEEIEYIVTHG 2955
Query: 932 TGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKI 991
TGTKLGDPVEINAL++ FK T Q +CA+TS+K+N GH FAASGLVSLINLV S+++++
Sbjct: 2956 TGTKLGDPVEINALNEAFKAHTGKQSYCALTSSKTNFGHAFAASGLVSLINLVLSLRHEM 3015
Query: 992 IPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051
IP SLH E+EN+YI SPFY+N+ K W+ +R GAVSAFGMSGTNAH+VL+ Y
Sbjct: 3016 IPPSLHFEQENDYIHWGASPFYVNREAKVWSRPEGTVRTGAVSAFGMSGTNAHMVLESYA 3075
Query: 1052 STNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN--NTVCIENFVYTLM 1109
++ K + PYH++ LSAKTK +L EK++ ++ L + N + + YTL+
Sbjct: 3076 ----RDRKGGVSKARPPYHLLALSAKTKEALDEKIRDMIQTLDQETWNDEDLPHISYTLL 3131
Query: 1110 QGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKI 1143
+GR HF +RCA++I + + K + +S EK+
Sbjct: 3132 KGRRHFSHRCAVVIQDLGD-AKYVLKLSSSSEKV 3164
|
Source: Paenibacillus vortex V453 Species: Paenibacillus vortex Genus: Paenibacillus Family: Paenibacillaceae Order: Bacillales Class: Bacilli Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|117617418|gb|ABK51300.1| BryB [Candidatus Endobugula sertula] | Back alignment and taxonomy information |
|---|
Score = 945 bits (2442), Expect = 0.0, Method: Composition-based stats.
Identities = 527/1177 (44%), Positives = 720/1177 (61%), Gaps = 94/1177 (7%)
Query: 29 NNLLCFSSNKDFQNKIVESISSY---TDIIFIEQSDNIKISPNDTVHYKIN----KDNIN 81
N L+CF + K+ Q + +SIS + T +IFI Q+ + +D HY +N K
Sbjct: 3839 NTLICFLTGKEHQKALQQSISFHSPKTRLIFISQAQAYEQYSSD--HYAVNPEIGKTYQQ 3896
Query: 82 DYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKKSKLYLRKLIISGIS 141
+ I+ I++ D + + YLW LED+ I + +PI+Y L++++ S L KL+ G
Sbjct: 3897 AFQHIVKSIHKSD--VTDIMYLWALEDECWITSPLPIVYLLKSIEVSLLKPEKLLFVG-- 3952
Query: 142 INKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIVF-------AEKITNFNIKNWINIL 194
+ + L CY SW+ FERSL +++P+ +++++ + +TN + WI L
Sbjct: 3953 ---EFKTSLQRCYLESWLGFERSLGLVLPDVEVAVLLEAVEGSQSHTVTN-QMDLWIEKL 4008
Query: 195 FKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSD 254
+ L+ K+ S +Y RY L + + L +N QG T LITGG G LG +F+D
Sbjct: 4009 WSSLKAQKVHSSLYQNGR--RYVLKNQPLPLVMNQNIQCLQG-TLLITGGCGGLGFVFAD 4065
Query: 255 YLINKYSTNLILSGRSKLN---SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311
Y Y NLIL GRS L+ + L+K ++ Y+Q D+ D+ + E++
Sbjct: 4066 YFSKTYKINLILVGRSDLDKEKQSQIQALEKSGSRVAYVQTDICDEKNLQLELDIAQKYC 4125
Query: 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFV 371
GPI GV+H AGI I E + +NF +VL+ KI GT+ L+ L LDF+
Sbjct: 4126 GPIQGVIHAAGIID-QKTIFEKSPENFQAVLAPKIQGTLILDNVL-------SAQSLDFI 4177
Query: 372 CYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI 431
CYFSSSSA+LGD GSCDYAM NRF +A+Y N K K + I+WP WN +
Sbjct: 4178 CYFSSSSALLGDAGSCDYAMANRFLMAHAQYRNTLVSEGKRKGKTLVIHWPAWNVKGMGL 4237
Query: 432 G---NNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQIIN---- 484
N +T+FY KSS Q++L +G +L LL QD Q L+L+G ++ Q +
Sbjct: 4238 NGLDENVKTEFYLKSSGQRLLDIKEGCELLNTLLAQDYSQCLILAGRKNRIYQFLGLTQD 4297
Query: 485 -------------NIAPKVSENKK--INNFNIEKFIENDIKNHICNILNTKKSEIYKNKN 529
N+ + NK+ I + ++E+ I D+K I L + + N
Sbjct: 4298 VSTSQVSQGQEVMNLQQDLDSNKRAEIEDLSVEECIILDLKTLITEQLKIPSAHLDVESN 4357
Query: 530 LADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKY 589
LAD+GFDS+SLA FSR LS Y +I PS+FF Y T+ERL YF+K H M FY+ K
Sbjct: 4358 LADFGFDSVSLANFSRALSIHYHFNITPSVFFGYPTIERLSGYFLKEHTALMEAFYQQK- 4416
Query: 590 PLKTESKNISILYDNKINENYENVSKKSNFIL---NKNTDI----------NSEELIAII 636
KT + N N ++ +V +K L N + I + +E IAII
Sbjct: 4417 --KTSNSN------NTLSVIVPHVKEKPTTDLISSNASPSIADPLPPQAIESIDEPIAII 4468
Query: 637 GMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPG 696
GMSGRFP AR + W+IL K + EIP + F+W YYE+P K NSKW IPG
Sbjct: 4469 GMSGRFPEARTVEAMWEILSEGKSAVQEIPIERFNWHEYYEHPSDDVRKTNSKWSACIPG 4528
Query: 697 IDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSN 756
I EFDP FFEISP EA+++DP QRHLLQESW ALE+A YG I N+ +G F+GVEEG
Sbjct: 4529 IKEFDPQFFEISPREAKKLDPLQRHLLQESWNALENAAYGKLHIDNKTMGTFIGVEEGY- 4587
Query: 757 YQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDT 816
Y++ L++ T HNAIL++RLAYF+D GP MAINTACSS LVA H AC SLRQ ECDT
Sbjct: 4588 YKNLLNEDEATLNHNAILASRLAYFLDFSGPTMAINTACSSGLVALHQACLSLRQQECDT 4647
Query: 817 AISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876
AI A NL+ +P+ Y+ MT AGMLSPDGKCY FD+RANG+VP EAVVA+VLKRLSRA +D
Sbjct: 4648 AIVAAANLIFTPQVYVGMTQAGMLSPDGKCYTFDQRANGIVPGEAVVAIVLKRLSRAEAD 4707
Query: 877 GDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 936
GDPI+A IRG+GINYDGKTNGITAP+G +QT L+K+VYK++ +N EDI+YI+THGTGTKL
Sbjct: 4708 GDPIYASIRGTGINYDGKTNGITAPSGTAQTRLLKNVYKRAQVNVEDISYIVTHGTGTKL 4767
Query: 937 GDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASL 996
GD +E+NAL+D FK++T Q +CA+TS K+N GHTFAASGL+SL+NLVQ+ ++ IPASL
Sbjct: 4768 GDLIEVNALYDAFKSETSKQGYCALTSAKTNFGHTFAASGLLSLVNLVQAFQHDQIPASL 4827
Query: 997 HCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFK 1056
+CEKEN+YI +SPFY+NK NK W + K R+GAVSAFGMSGTNAHIVLQEY
Sbjct: 4828 YCEKENDYIQWSSSPFYVNKHNKPWPRQSGKPRLGAVSAFGMSGTNAHIVLQEYPD---- 4883
Query: 1057 NIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN--NTVCIENFVYTLMQGRHH 1114
+KN ++ + PY ++VLSAKT+I+L+E++ +L L+ + + TL GR+H
Sbjct: 4884 EVKNVSYKA--PYFLLVLSAKTEIALQERLSSLLGALQYEPIKKQAMASIACTLQTGRYH 4941
Query: 1115 FQYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKG 1151
FQYRCA+++ +E + + S+ +YL G
Sbjct: 4942 FQYRCALVVKDRDEAISCLQQVSGSENP---AHYLTG 4975
|
Source: Candidatus Endobugula sertula Species: Candidatus Endobugula sertula Genus: Candidatus Endobugula Family: Order: Alteromonadales Class: Gammaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|121624846|gb|ABM63527.1| BryB [Candidatus Endobugula sertula] | Back alignment and taxonomy information |
|---|
Score = 942 bits (2435), Expect = 0.0, Method: Composition-based stats.
Identities = 525/1176 (44%), Positives = 717/1176 (60%), Gaps = 92/1176 (7%)
Query: 29 NNLLCFSSNKDFQNKIVESISSY---TDIIFIEQSDNIKISPNDTVHYKIN----KDNIN 81
N L+CF + K+ Q + +SIS + T +IFI Q+ + +D HY +N K
Sbjct: 3829 NTLICFLTEKEHQKALQQSISFHSPKTRLIFISQAQAYEQYSSD--HYAVNPEIGKTYQQ 3886
Query: 82 DYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKKSKLYLRKLIISGIS 141
+ I+ I++ D + + YLW LED+ I + +PI+Y L++++ S L KL+ G
Sbjct: 3887 AFQHIVKSIHKSD--VTDIMYLWALEDERWITSPLPIVYLLKSIEVSLLKPEKLLFVG-- 3942
Query: 142 INKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIVF--AEKITNFNIKN----WINILF 195
+ + L CY SW+ FERSL +++P+ +++++ E + + WI L+
Sbjct: 3943 ---EFKTSLQRCYLESWLGFERSLGLVLPDIEVAVLLEAVEGTQSHTVTKQMDLWIEKLW 3999
Query: 196 KELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDY 255
L+ K+ S +Y RY L + + L ++ QG T LITGG G LG +F+DY
Sbjct: 4000 SSLKAQKVHSSLYQNGR--RYFLKTQPLQLVMNQSIQCLQG-TLLITGGCGGLGFVFADY 4056
Query: 256 LINKYSTNLILSGRSKLN---SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312
Y NLIL GRS L+ + L+K ++ Y+Q D+ D+ + E++ G
Sbjct: 4057 FSKTYKINLILVGRSDLDKEKQSQIQALEKSGSRVAYVQTDICDEKNLQLELDIAQKYCG 4116
Query: 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVC 372
PI GV+H AGI I E + +NF +VL+ KI GT+ L+ L LDF+C
Sbjct: 4117 PIQGVIHAAGIID-QKTIFEKSPENFQAVLAPKIQGTLILDNVL-------SAQSLDFIC 4168
Query: 373 YFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG 432
YFSSSSA+LGD GSCDYAM NRF +A+Y N K K + I+WP WN +
Sbjct: 4169 YFSSSSALLGDAGSCDYAMANRFLMAHAQYRNTLVSEGKRKGKTLVIHWPAWNVKGMGLN 4228
Query: 433 ---NNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQIIN----- 484
N +T+FY KSS Q++L +G +L LL QD Q L+L+G ++ Q +
Sbjct: 4229 GLDENVKTEFYLKSSGQRLLDIKEGCELLNTLLAQDYSQCLILAGRKNRIYQFLGLTQDV 4288
Query: 485 ------------NIAPKVSENKK--INNFNIEKFIENDIKNHICNILNTKKSEIYKNKNL 530
N+ + NK+ I + ++E+ I D+K I L + + NL
Sbjct: 4289 STSQVSQGQEVMNLQQDLDSNKRAEIEDLSVEECIILDLKTLITEQLKIPSAHLDVESNL 4348
Query: 531 ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYP 590
AD+GFDS+SLA FSR LS Y +I PS+FF Y T+ERL YF+K H M FY+ K
Sbjct: 4349 ADFGFDSVSLANFSRALSIHYHFNITPSVFFGYPTIERLSRYFLKEHTALMEAFYQQK-- 4406
Query: 591 LKTESKNISILYDNKINENYENVSKKSNFIL---NKNTDI----------NSEELIAIIG 637
KT + N N ++ +V +K L N + I + +E IAIIG
Sbjct: 4407 -KTSNSN------NTLSVIVPHVKEKPTTDLISSNASPSIADPLPPQAIESIDEPIAIIG 4459
Query: 638 MSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGI 697
MSGRFP AR + W+IL K + EIP + F+W YYE+P K NSKW IPGI
Sbjct: 4460 MSGRFPEARTVEAMWEILSEGKSAVQEIPIERFNWHEYYEHPSDDVRKTNSKWSACIPGI 4519
Query: 698 DEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY 757
EFDP FFEISP EA+++DP QRHLLQESW ALE+A YG I N+ +G F+GVEEG Y
Sbjct: 4520 KEFDPQFFEISPREAKKLDPLQRHLLQESWNALENAAYGKLHIDNKTMGTFIGVEEGY-Y 4578
Query: 758 QDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTA 817
++ L++ T HNAIL++RLAYF+D GP MAINTACSS LVA H AC SLRQ ECDTA
Sbjct: 4579 KNLLNEDEATLNHNAILASRLAYFLDFNGPTMAINTACSSGLVALHQACLSLRQQECDTA 4638
Query: 818 ISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 877
I A NL+ +P+ Y+ MT AGMLSPDGKCY FD+RANG+VP EAVVA+VLKRLSRA +DG
Sbjct: 4639 IVAAANLIFTPQVYVGMTQAGMLSPDGKCYTFDQRANGIVPGEAVVAIVLKRLSRAEADG 4698
Query: 878 DPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937
DPI+A IRG+GINYDGKTNGITAP+G +QT L+K+VYK++ +N EDI+YI+THGTGTKLG
Sbjct: 4699 DPIYASIRGTGINYDGKTNGITAPSGTAQTRLLKNVYKRAQVNVEDISYIVTHGTGTKLG 4758
Query: 938 DPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLH 997
D +E+NAL+D FK++T Q +CA+TS K+N GHTFAASGL+SL+NLVQ+ ++ IPASL+
Sbjct: 4759 DLIEVNALYDAFKSETRKQGYCALTSAKTNFGHTFAASGLLSLVNLVQAFQHDQIPASLY 4818
Query: 998 CEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKN 1057
CEKEN+YI +SPFY+NK NK W + K R+GAVSAFGMSGTNAHIVLQEY
Sbjct: 4819 CEKENDYIQWSSSPFYVNKHNKPWPRQSGKPRLGAVSAFGMSGTNAHIVLQEYPD----E 4874
Query: 1058 IKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN--NTVCIENFVYTLMQGRHHF 1115
+KN ++ + PY ++VLSAKT+I+L+E++ +L L+ + TL GR+HF
Sbjct: 4875 VKNVSYKA--PYFLLVLSAKTEIALQERLSSLLGALQYEPIKKQAMARIACTLQTGRYHF 4932
Query: 1116 QYRCAIIISSIEEVVKIINDTLNSKEKILHTNYLKG 1151
QYRCA+++ +E + + S+ +YL G
Sbjct: 4933 QYRCALVVKDRDEAISCLQQVSGSENP---AHYLTG 4965
|
Source: Candidatus Endobugula sertula Species: Candidatus Endobugula sertula Genus: Candidatus Endobugula Family: Order: Alteromonadales Class: Gammaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|345022635|ref|ZP_08786248.1| DfnG [Ornithinibacillus scapharcae TW25] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/1101 (43%), Positives = 699/1101 (63%), Gaps = 66/1101 (5%)
Query: 70 TVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKKSK 129
TVHY + + Y L I K+D+V YLWP E++ I + I+Y LQ + ++K
Sbjct: 1006 TVHY----GDKSGYVACLKDIMTSVGKVDAVLYLWPTEEEKWITDPTGILYLLQGIAEAK 1061
Query: 130 LYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIVFAEKITNFNIKN 189
+ +++++G ++DL + SW+ ERS ++MP T++SI+ A + + +
Sbjct: 1062 VKPDRVLLAG-----GYQDDLERSHLESWIGIERSTGLVMPGTKVSIIIANR-NETHSAD 1115
Query: 190 WINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSY-IKQGGTYLITGGTGRL 248
W+ L+KE+ K S+ Y GN R +I+ I +++ + +K+GG YL+TGG G L
Sbjct: 1116 WVERLWKEIHVVKAESVWYEGNH--RMVNSIRPIQVEESSQTVPLKKGGVYLLTGGVGGL 1173
Query: 249 GMLFSDYLINKYSTNLILSGRSKLNSIIYK--KLKKFNNKAIYIQVDVSDKLKMISEINS 306
GM+FS +L+ KY LIL RS + K +LK + +Y DV + ++ + +
Sbjct: 1174 GMIFSRWLVEKYQAKLILINRSSEEAKKDKLQELKNLGAEVVYYSADVCNADELKQAVKA 1233
Query: 307 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN 366
+ G +DGV+H AGI G S ILE + + + L K+ GT+AL AL Q
Sbjct: 1234 GKEHFGRLDGVIHAAGIEGKGS-ILEKSVEEYLRCLGPKVQGTLALEEAL-------QGE 1285
Query: 367 KLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426
LDF+CYFSSSSAI+GDFG+ DYA+GNRF Y Y + Y K + INWPLW +
Sbjct: 1286 TLDFICYFSSSSAIIGDFGNGDYAVGNRFLMSYGAYREQEG----YPGKTVIINWPLWKS 1341
Query: 427 SKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELE--------- 477
+ E + Y KSS QK L +G +FE+LL Q + Q+LV+ G E
Sbjct: 1342 EGMGFEDEEGSKMYLKSSGQKFLESEEGTAIFEKLLSQTRNQHLVMVGSRERVYRFLRIK 1401
Query: 478 -----KLNQIINN---IAPKVSENKKINNFNIEKFIENDIKNHICNILNTKKSEIYKNKN 529
K+ +I N ++P ++ ++ IE+ + D+K++ IL K ++ +N
Sbjct: 1402 EKVDAKMEKIETNKVIVSPGKGRRPEMKDWTIEQCLLWDLKDNTSQILQIPKEKLGIEEN 1461
Query: 530 LADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRN-- 587
LAD+GFDS+SL EF+ +LS Y +DI P IFF Y T+ERL Y ++ + M +FY
Sbjct: 1462 LADFGFDSVSLGEFAELLSNRYQIDITPDIFFGYPTMERLSEYLLERYRVEMAEFYHEGE 1521
Query: 588 KYPLKTESK------NISILYDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGR 641
++P++ E + ++ + +++ ++++ NF K+ D++ E+ IAIIGMSGR
Sbjct: 1522 EHPIEVEQEVSYALAGVAATKEKYVDKKERKITRR-NFSNQKSRDVSKEDSIAIIGMSGR 1580
Query: 642 FPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFD 701
FP AR+++EFW IL K+VI E+P + +W +++ K +G +PG+ EFD
Sbjct: 1581 FPEARSVDEFWSILKEGKEVIREVPHERTEWP--------EADRKGRK-FGILPGLAEFD 1631
Query: 702 PLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRL 761
PLFFEISP EA +DPRQR LLQE+W ALEDAGYG N+KIGMFVG+E+G
Sbjct: 1632 PLFFEISPREASYIDPRQRLLLQETWKALEDAGYGSKAFDNEKIGMFVGIEDGDYKTIAG 1691
Query: 762 DQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAG 821
++ +T+ HNAIL+ARL+YF++L GP MAINTACSSSLVA H ACQSLR ECDTAI AG
Sbjct: 1692 NEAGITTNHNAILAARLSYFLNLDGPNMAINTACSSSLVAVHQACQSLRSGECDTAIVAG 1751
Query: 822 VNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIH 881
NLMI+PE Y +M AGMLS +G CY FD+RANG+VP EAV A+VLKR S+A +D +PI+
Sbjct: 1752 ANLMITPELYNSMNHAGMLSEEGTCYAFDKRANGMVPGEAVAAIVLKRQSKAEADRNPIY 1811
Query: 882 AIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941
A I GSGINYDGKTNGITAP+G SQ++LIK VY ++NP+D+ YI+THGTGTKLGDPVE
Sbjct: 1812 ASIVGSGINYDGKTNGITAPSGSSQSKLIKEVYDHYHINPQDMEYIVTHGTGTKLGDPVE 1871
Query: 942 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE 1001
INAL + FK+ + + +CA+TS K NIGHT AASGLVSLI+LV S+K+++IPAS++CE+
Sbjct: 1872 INALSEAFKDYSEARNYCALTSVKPNIGHTLAASGLVSLISLVMSLKHEMIPASINCEQP 1931
Query: 1002 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNN 1061
NNYI +NSPFY+N++N++W + K R+ AVS+FGMSGTNAH+VLQ Y+ +NI +
Sbjct: 1932 NNYIQWENSPFYVNRANREWKDRDGKRRLSAVSSFGMSGTNAHVVLQSYVPEESENILPS 1991
Query: 1062 TFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNN---TVCIENFVYTLMQGRHHFQYR 1118
+ + PY+++ LSAKT SL+++++ + + L + + + N YTLM+GR HFQYR
Sbjct: 1992 S-LKEKPYYLLALSAKTPESLQQRIRDLKVMLEREQDFRPLELANISYTLMEGRQHFQYR 2050
Query: 1119 CAIIISSIEEVVKIINDTLNS 1139
A+++S+ + + ++ + N
Sbjct: 2051 FAVVVSNTNDALHVLQHSANG 2071
|
Source: Ornithinibacillus scapharcae TW25 Species: Ornithinibacillus scapharcae Genus: Ornithinibacillus Family: Bacillaceae Order: Bacillales Class: Bacilli Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|387898997|ref|YP_006329293.1| Putative polyketide synthase, partial [Bacillus amyloliquefaciens Y2] gi|387173107|gb|AFJ62568.1| Putative polyketide synthase [Bacillus amyloliquefaciens Y2] | Back alignment and taxonomy information |
|---|
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/1150 (42%), Positives = 683/1150 (59%), Gaps = 81/1150 (7%)
Query: 11 KVWVKSPLISLPISKVKKNNLLCFSSNKDFQNKIVESISSY---TDIIFIEQSDNIKISP 67
++W + PL+ ++K ++CF + + + S+ S + FI Q + +
Sbjct: 1482 EMWTQQPLMKSIHEELK--TVICFLTEEAARMHAYRSLQSLYPGAGVFFISQGEETQKLS 1539
Query: 68 NDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKK 127
N HY+I + Y I K D+V Y WPLED+ + + + + ++A
Sbjct: 1540 N--THYEIKITDGQAYQETFRHIETAAGKADAVLYGWPLEDEKAVKDYSILYHVIRAAAS 1597
Query: 128 SKLYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIV-FAEKITNFN 186
+ R++++S + D Y SW+ ERSL +I+PET + V F +K
Sbjct: 1598 LRSKPRRILLSA-----QCGTDTDISYAESWIGLERSLKLILPETDTAAVYFGQK---GP 1649
Query: 187 IKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTG 246
++ I+ + +EL S+MY G IR+ + +K + + IK G TYLITGG G
Sbjct: 1650 LEKLIHNVCEELHSESFRSVMYSGE--IRHVMEMKQTDIAPVEKRVIKSGKTYLITGGCG 1707
Query: 247 RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN---KAIYIQVDVSDKLKMISE 303
LG+LF+ Y K LIL+GRS + K+K+ K Y+Q D +D+ +M
Sbjct: 1708 GLGLLFAGYFAEKGPVTLILTGRSAAGGPVLNKIKRLEESGAKVFYVQADAADQAQMEKG 1767
Query: 304 INSIIN-NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILK 362
+ GPI GV+H AG+ G T +ILE + + F VLS K GT L+ L
Sbjct: 1768 LQEAKEKGCGPIHGVIHAAGLQG-TESILEKDLQTFQQVLSPKADGTAVLDQVL------ 1820
Query: 363 LQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWP 422
+ LDF C FSSSSAILGDFGSCDYAMGNRFQ + ++ + + K + INWP
Sbjct: 1821 -SREPLDFFCCFSSSSAILGDFGSCDYAMGNRFQMTFVRHRDKLVSLGLRSGKSLAINWP 1879
Query: 423 LWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSG---ELEKL 479
LW +G E TD Y KSS Q+ L+ +GL+ FE LL+Q QYLVL+G ++
Sbjct: 1880 LWKEGGMHVGTTESTDMYLKSSGQRYLYTEEGLEAFETLLVQPSSQYLVLAGFPSRAKRF 1939
Query: 480 NQI----------INNIAPKVSENKKINNFNIEKFIENDIKNHICNILNTKKSEIYKNKN 529
QI +N P ++ F +E+ + D+K +L K+ + N
Sbjct: 1940 LQIDQGERPISGSVNRNVPFSGRRSEMKGFTLEECVSWDVKELAAGLLKIDKNRLTDADN 1999
Query: 530 LADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKY 589
LAD+GFDSISLAEF+ LS Y +++ P++FF +STLE+++ YF+ H + M Y K
Sbjct: 2000 LADFGFDSISLAEFASSLSAHYGIEVTPALFFGHSTLEKVVRYFLTEHKSVMEHVYEEKK 2059
Query: 590 PLKTESKNISILYDNKINENYENVSKKSNFILNKNTD-INSEELIAIIGMSGRFPAARNI 648
P ES + S+ + + + LN T+ + + IAIIGMSGRFP AR
Sbjct: 2060 P---ESADQSVFEKAGTEKRKKQRGRNK---LNAGTEGSQAADSIAIIGMSGRFPQARTA 2113
Query: 649 NEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKW-YGSIPGIDEFDPLFFEI 707
+E W IL KDV++ + +K F +SKW G++PG DEFDPLFFEI
Sbjct: 2114 DELWDILFQEKDVVAPVAKKGF---------------TSSKWKLGAVPGADEFDPLFFEI 2158
Query: 708 SPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLT 767
SP EAE MDP+QR LLQE+W ALEDAGYG + I Q IGMFVG EEG + D+ N+T
Sbjct: 2159 SPREAETMDPKQRLLLQEAWRALEDAGYGASHIRQQTIGMFVGAEEGDYHLLTRDKGNVT 2218
Query: 768 STHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS 827
S HN IL+ARLAY ++L GPVMAINTACSS LV+ H A SL+ EC TA++AGVN+M +
Sbjct: 2219 SHHNGILAARLAYHLNLSGPVMAINTACSSGLVSVHQAVLSLQNKECTTAVAAGVNIMNT 2278
Query: 828 PEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGS 887
P+ + + AGMLS +GKC+ FD+RA+G+VP EA AVVLK L A DGDPI+ +IR S
Sbjct: 2279 PDFFETIDKAGMLSENGKCFAFDKRADGMVPGEAAAAVVLKPLREAEKDGDPIYGVIRAS 2338
Query: 888 GINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHD 947
GINYDGKTNGITAP+G++QT L+ SVY + +NPEDI YI+THGTGTKLGDPVEINAL+D
Sbjct: 2339 GINYDGKTNGITAPSGVAQTRLLISVYDRGRINPEDIEYIVTHGTGTKLGDPVEINALYD 2398
Query: 948 VFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIIL 1007
F T + FCA+TS K+NIGHTFAASG+VSLI+L+Q+ ++IPASLHC EN YI
Sbjct: 2399 AFSAYTNEEAFCALTSIKTNIGHTFAASGIVSLISLLQAFSREMIPASLHCSGENRYINW 2458
Query: 1008 KNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSN 1067
+ SPFY+NK+ K W ++ K R+GAVSAFGMSGTNAH+V++ Y +N +
Sbjct: 2459 EKSPFYVNKTGKPWPSLPGKNRMGAVSAFGMSGTNAHVVMESY-------KRNASPHRDA 2511
Query: 1068 PYHMVVLSAKTKISLKEKMKQILLF-----LRKNNTVCIENFVYTLMQGRHHFQYRCAII 1122
P +++ LSAKT+ +L+EK++ ++ + L++N+ + YTL++GRHHF +R AI+
Sbjct: 2512 PAYLLTLSAKTEEALQEKIEDMITWAENGGLKEND---LAQLSYTLLKGRHHFNHRAAIV 2568
Query: 1123 ISSIEEVVKI 1132
+ ++ V +
Sbjct: 2569 VQDADDAVYV 2578
|
Source: Bacillus amyloliquefaciens Y2 Species: Bacillus amyloliquefaciens Genus: Bacillus Family: Bacillaceae Order: Bacillales Class: Bacilli Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|394993052|ref|ZP_10385815.1| DfnG, partial [Bacillus sp. 916] gi|393806094|gb|EJD67450.1| DfnG, partial [Bacillus sp. 916] | Back alignment and taxonomy information |
|---|
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/1149 (42%), Positives = 682/1149 (59%), Gaps = 79/1149 (6%)
Query: 11 KVWVKSPLISLPISKVKKNNLLCFSSNKDFQNKIVESISSY---TDIIFIEQSDNIKISP 67
++W + PL ++K ++CF + + + +S+ + + FI Q + +
Sbjct: 1482 EMWTQQPLKKSIHEELK--TVICFLTGEAARKHAYQSLQTLYPGAGVFFISQGEETQKLS 1539
Query: 68 NDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKK 127
N HY+I + Y I K D+V Y WPLED+ + + + + ++A
Sbjct: 1540 N--THYQIKITDGQAYQETFRHIETAAGKADAVLYGWPLEDEKAVKDYSILYHVIRAAAS 1597
Query: 128 SKLYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIVFAEKITNFNI 187
+ R++++S + D Y SW+ ERSL +I+PET + V+ E+ +
Sbjct: 1598 LRSKPRRILLSA-----QCGTDTDISYAESWIGLERSLKLILPETDTAAVYFEQ--KGPL 1650
Query: 188 KNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGR 247
+ I+ + +EL S+MY G IR+ + +K + + IK G TYLITGG G
Sbjct: 1651 EKLIHNVCEELHSESFRSVMYSGE--IRHVMEMKQTDIAPVEKRVIKSGKTYLITGGCGG 1708
Query: 248 LGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN---KAIYIQVDVSDKLKMISEI 304
LG+LF+ Y K LIL+GRS + K+K+ K Y+Q D +D+ +M +
Sbjct: 1709 LGLLFAGYFAEKGPVTLILTGRSAAAGPVLNKIKRLEESGAKVFYVQADAADQAQMEKGL 1768
Query: 305 NSIIN-NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKL 363
+ GPI GV+H AG+ G T +ILE + + F VLS K GT L+ L
Sbjct: 1769 QEVKEKGCGPIHGVIHAAGLQG-TESILEKDLQTFQQVLSPKADGTAVLDQVL------- 1820
Query: 364 QKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPL 423
+ LDF C FSSSSAILGDFGSCDYAMGNRFQ + + + + K + INWPL
Sbjct: 1821 SREPLDFFCCFSSSSAILGDFGSCDYAMGNRFQMAFVHHRDKLVSLGLRSGKSLAINWPL 1880
Query: 424 WNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSG---ELEKLN 480
W +G E TD Y KSS Q+ L+ +GL+ FE LL+Q QYLVL+G ++
Sbjct: 1881 WKEGGMHVGTAESTDMYLKSSGQRYLYTEEGLEAFETLLVQPSSQYLVLAGFPSRAKRFL 1940
Query: 481 QI----------INNIAPKVSENKKINNFNIEKFIENDIKNHICNILNTKKSEIYKNKNL 530
QI +N P ++ F +E+ + D+K +L K+ + NL
Sbjct: 1941 QIDQGERPISGSVNRNVPFSGRRSEMKGFTLEECVSWDVKELAAGLLKIDKNRLTDADNL 2000
Query: 531 ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYP 590
AD+GFDSISLAEF+ LS Y +++ P++FF +STLE+++ YF+ H + M Y K P
Sbjct: 2001 ADFGFDSISLAEFASSLSAHYGIEVTPALFFGHSTLEKVVRYFLTEHQSVMEHVYEEKKP 2060
Query: 591 LKTESKNISILYDNKINENYENVSKKSNFILNKNTD-INSEELIAIIGMSGRFPAARNIN 649
ES + S+ + + + LN T+ + + IAIIGMSGRFP AR +
Sbjct: 2061 ---ESADQSVFEKAGTEKRKKQRGRNK---LNAGTEGSQAADSIAIIGMSGRFPQARTAD 2114
Query: 650 EFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKW-YGSIPGIDEFDPLFFEIS 708
E W IL KDV++ + +K F +SKW G++PG DEFDPLFFEIS
Sbjct: 2115 ELWDILFQEKDVVAPVAKKGF---------------TSSKWKLGAVPGADEFDPLFFEIS 2159
Query: 709 PLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTS 768
P EAE MDP+QR LLQE+W ALEDAGYG + I Q IGMFVG EEG + D+ N+TS
Sbjct: 2160 PREAETMDPKQRLLLQEAWRALEDAGYGASHIKQQTIGMFVGAEEGDYHLLTRDKGNVTS 2219
Query: 769 THNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISP 828
HN IL+ARLAY ++L GPVMAINTACSS LV+ H A SL+ EC TA++AGVN+M +P
Sbjct: 2220 HHNGILAARLAYHLNLSGPVMAINTACSSGLVSVHQAVLSLQNKECTTAVAAGVNIMNTP 2279
Query: 829 EAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSG 888
+ + + AGMLS +GKC+ FD+RA+G+VP EA AVVLK L A DGDPI+ +IR SG
Sbjct: 2280 DFFETIDKAGMLSENGKCFAFDKRADGMVPGEAAAAVVLKPLREAEKDGDPIYGVIRASG 2339
Query: 889 INYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV 948
INYDGKTNGITAP+G++QT L+ SVY + +NPEDI YI+THGTGTKLGDPVEINAL+D
Sbjct: 2340 INYDGKTNGITAPSGVAQTRLLTSVYDRGRINPEDIEYIVTHGTGTKLGDPVEINALYDA 2399
Query: 949 FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008
F T + FCA+TS K+NIGHTFAASG+VSLI+L+Q+ ++IP SLHC EN YI +
Sbjct: 2400 FSAYTNEEAFCALTSIKTNIGHTFAASGIVSLISLLQAFSREMIPVSLHCSGENRYINWE 2459
Query: 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNP 1068
SPFY+NK K W ++ K R+GAVSAFGMSGTNAH+V++ Y ++ + P
Sbjct: 2460 KSPFYVNKRGKPWPSLPGKNRMGAVSAFGMSGTNAHVVMESY-------KRSASPHRDAP 2512
Query: 1069 YHMVVLSAKTKISLKEKMKQILLF-----LRKNNTVCIENFVYTLMQGRHHFQYRCAIII 1123
+++ LSAKT+ +L+EK+++++ + L++N+ + YTL++GRHHF +R AI++
Sbjct: 2513 AYLLTLSAKTEEALQEKIEEMITWAENGGLKEND---LAQLSYTLLKGRHHFNHRAAIVV 2569
Query: 1124 SSIEEVVKI 1132
++ V +
Sbjct: 2570 QDADDAVYV 2578
|
Source: Bacillus sp. 916 Species: Bacillus sp. 916 Genus: Bacillus Family: Bacillaceae Order: Bacillales Class: Bacilli Phylum: Firmicutes Superkingdom: Bacteria |
| >gi|121624850|gb|ABM63537.1| BryA [Candidatus Endobugula sertula] | Back alignment and taxonomy information |
|---|
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/1163 (42%), Positives = 709/1163 (60%), Gaps = 83/1163 (7%)
Query: 11 KVWVKSPLISLPISKVKKNNLLCFSSNKDFQNKIVESISSYT---DIIFIEQSDNIKISP 67
+ W +S SK K N +CF S+ + Q +V++ + +IIF+ + D+ +
Sbjct: 1992 ECWEARSQLSTISSKTK--NCVCFLSDVESQKSLVKTFMDFNPNINIIFVSRGDSY--AK 2047
Query: 68 NDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKK 127
+Y ++ + NDY +I + ++ + YLWP+ED N I + PI+ LQA +
Sbjct: 2048 KSAQNYIVSSHHKNDYVSAFEEIKKSIGNVEVILYLWPIEDSNYIPDYTPIVNLLQASQF 2107
Query: 128 SKLYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSLHIIMPETQISIVFAEKITNFN- 186
++ ++ +++ + L CY SW+ FERSL +++ + + VF E + +
Sbjct: 2108 AQCRFKRCLLAA-----QLSHALDCCYVESWIGFERSLKLVINDAALITVFRESSEHEDT 2162
Query: 187 IKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTG 246
IKNW L++E+ S+ Y + I+ I L + +K GTYLITGG G
Sbjct: 2163 IKNWSKRLWQEMHAVDFKSVFYQKEK--SFVCRIRQISLTA-ERVLLKNKGTYLITGGAG 2219
Query: 247 RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN---KAIYIQVDVSD--KLKMI 301
+LG+LF+ L N NL+L GRS +N+ I +K N+ KA+Y+Q +V D LK
Sbjct: 2220 KLGLLFARKLANMQEINLVLVGRSPINNDIQDCCEKINSLGSKALYLQANVCDIDDLKRC 2279
Query: 302 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTIL 361
E + G I GV+H AGI +I E ++ +F VL KI GT+ +N T
Sbjct: 2280 RE--KVNQCFGKIRGVIHAAGIQH-NQSIFEKDFFDFEKVLEPKIKGTLVINKVFNIT-- 2334
Query: 362 KLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINW 421
++DF+CYFSSSSAILGDFGSCDYA+ NRFQ Y Y + K I INW
Sbjct: 2335 -----EMDFICYFSSSSAILGDFGSCDYAIANRFQMAYTDYQHQSGCL----GKAIVINW 2385
Query: 422 PLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQ 481
P W + G T KSS Q++L +G +F L Q K Q+L+L+G+ +++
Sbjct: 2386 PQWKDGAMGFGEGGNTKMALKSSGQRLLESTEGFDMFMNFLGQKKYQHLLLAGKPDRVYD 2445
Query: 482 IINNIAPKVSEN-----KKINNFNIEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFD 536
+ +P V+ + I NI++ IE D++N+I +L K+++ +NLAD+GFD
Sbjct: 2446 FLGITSPLVNSSNNTIQTSIKEVNIKQLIEEDLQNYINQLLKIPKNQLDIKRNLADFGFD 2505
Query: 537 SISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESK 596
SI L EF+ L++ +++++ P +FF Y TLE++ TYF + + + YR E
Sbjct: 2506 SIRLKEFAHFLTQHFTIEVTPLLFFEYPTLEKISTYFTEQYAEIVENIYRQ------EGS 2559
Query: 597 NISILYDNKINENYENVSKKSNFILNK---NTDINSEELIAIIGMSGRFPAARNINEFWK 653
++L KKS+ +L +T + E IAIIGMSGRFP ARNI+E W
Sbjct: 2560 EDTML------------DKKSSRVLAAPITHTVTTAHEPIAIIGMSGRFPEARNIHEMWN 2607
Query: 654 ILINNKDVISEIP-EKIFDWKLYYENPIKSSNKINSK--WYGSIPGIDEFDPLFFEISPL 710
IL + V+ EI E+ +++ Y ++N W G IPG EFDPLFFEISPL
Sbjct: 2608 ILSEQRHVVQEISIERFPEYQEYL-------TQVNGGHWWSGCIPGAYEFDPLFFEISPL 2660
Query: 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTH 770
EAE MDPRQR LLQESW ALEDAGYG ++N+ IGMFVG E G +YQ N+TS H
Sbjct: 2661 EAEMMDPRQRLLLQESWNALEDAGYGQEDMSNKSIGMFVGAETG-DYQGLASGSNITSKH 2719
Query: 771 NAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEA 830
NA+L+ARLAYF++L GPVM+I+T CSS+LVA H AC +LRQHECDTAI AGVNL + E
Sbjct: 2720 NAMLAARLAYFLNLSGPVMSIDTTCSSALVALHQACVNLRQHECDTAIVAGVNLCFALET 2779
Query: 831 YIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN 890
Y ++ AGMLSPDGKC+ FD+RANG+VP EAVVAVVLK LS+A++DGDP++A IRGSG+N
Sbjct: 2780 YQTLSHAGMLSPDGKCFTFDKRANGMVPGEAVVAVVLKPLSQAIADGDPVYASIRGSGLN 2839
Query: 891 YDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFK 950
YDGKTNGITAP+G +QT L+K VY+++ ++ + I+YI+ HGTGT+LGDP+E+NAL+D FK
Sbjct: 2840 YDGKTNGITAPSGTAQTALLKQVYEQAQVDVKHIDYIVAHGTGTQLGDPIEVNALYDAFK 2899
Query: 951 NKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 1010
+ T Q +CA+TS K+N GHTFAASGLVSL++LVQ+++++ IPASLHCE+EN+YI +S
Sbjct: 2900 DNTDKQNYCALTSTKTNFGHTFAASGLVSLVSLVQALEHEQIPASLHCEEENDYIHWSSS 2959
Query: 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYH 1070
PFY+NK + W K R+GA+SAFG+SGTN H+++++ I + PY+
Sbjct: 2960 PFYVNKQTRPWPKQGNKARMGALSAFGISGTNTHVIVEDSIR------EAEGGADPLPYY 3013
Query: 1071 MVVLSAKTKISLKEKMKQILLFLRKNN--TVCIENFVYTLMQGRHHFQYRCAIIISSIEE 1128
++VLSAKT+ +L+ ++ ++ L+++ V + YTL GRHHFQYR A+++ E+
Sbjct: 3014 LIVLSAKTESALQARIHRLQDALQEDRLAKVDMSALAYTLQTGRHHFQYRSALVVQDRED 3073
Query: 1129 VVKIINDTLNSKEKILHTNYLKG 1151
+ + ++K+ N L G
Sbjct: 3074 AIYSLGQL---RDKVQRLNGLTG 3093
|
Source: Candidatus Endobugula sertula Species: Candidatus Endobugula sertula Genus: Candidatus Endobugula Family: Order: Alteromonadales Class: Gammaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1152 | ||||||
| UNIPROTKB|Q4KCD4 | 4163 | rzxE "Polyketide synthase RzxE | 0.914 | 0.253 | 0.386 | 2.2e-202 | |
| UNIPROTKB|Q4KCD6 | 4039 | rzxD "Polyketide synthase RzxD | 0.728 | 0.207 | 0.329 | 9.8e-120 | |
| UNIPROTKB|Q4KCD7 | 4937 | rzxC "Polyketide synthase RzxC | 0.735 | 0.171 | 0.307 | 4.3e-102 | |
| UNIPROTKB|Q4KCD8 | 6675 | rzxB "Polyketide synthase/nonr | 0.507 | 0.087 | 0.330 | 6.3e-87 | |
| UNIPROTKB|Q4KCD3 | 2541 | rzxF "Polyketide synthase RzxF | 0.519 | 0.235 | 0.315 | 1.7e-101 | |
| UNIPROTKB|Q10977 | 1876 | ppsA "Phthiocerol synthesis po | 0.363 | 0.223 | 0.400 | 1.1e-81 | |
| UNIPROTKB|Q7TXM0 | 1876 | ppsA "Phthiocerol/phenolphthio | 0.363 | 0.223 | 0.398 | 2e-80 | |
| UNIPROTKB|Q10978 | 1538 | ppsB "Phthiocerol synthesis po | 0.359 | 0.269 | 0.386 | 3.2e-80 | |
| UNIPROTKB|Q7TXL9 | 1538 | ppsB "Phthiocerol/phenolphthio | 0.359 | 0.269 | 0.386 | 3.2e-80 | |
| UNIPROTKB|O53490 | 4151 | pks12 "Probable polyketide syn | 0.418 | 0.116 | 0.340 | 2.6e-79 |
| UNIPROTKB|Q4KCD4 rzxE "Polyketide synthase RzxE" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 1974 (699.9 bits), Expect = 2.2e-202, P = 2.2e-202
Identities = 436/1127 (38%), Positives = 659/1127 (58%)
Query: 31 LLCFSSNKDFQNKI---VESISSYTDIIFIEQSDNIKISPNDTV-HYKINKDNINDYTFI 86
L+C + + ++ V+++S T+++F+ ++ D HY++ + +
Sbjct: 1055 LICLLAEPGLRRQLADEVQALSPDTELLFVAPGP---LNERDQEGHYRVAVHHPHLLQQG 1111
Query: 87 LNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKKSKLYLRKLIISGISINKKN 146
L ++ V YLW ++D+ I + PI+ L+A+ + + +L+++G + N
Sbjct: 1112 LQQVLGS-AVATRVLYLWGMDDRRWISDSSPIVALLKAMAVTAAPVARLLLAGRASN--- 1167
Query: 147 EEDLYYCYFNSWVAFERSLHIIMPETQISIVFAEKI----TNFNIKNWINILFKELQEPK 202
L C+ SW+ ERSL +M + + E I + + W+ L+++L
Sbjct: 1168 --GLERCHLESWIGIERSLGSLMA-CAVEVAIDEAIDVHGAGADERRWLQRLWRQLSGQP 1224
Query: 203 LFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKY-- 260
S +Y R L I + + + + Q T LITGG G LG+L + L N+
Sbjct: 1225 TGSRLYRDTRSQRPVL-IAAPVEAAAEPLALDQLNTLLITGGLGELGLLLAGELSNRARL 1283
Query: 261 ----STNLILSGRSKLNSIIYKKLKKFNN---KAIYIQVDVSDKLKMXXXXXXXXXXXGP 313
L+L+GRS L++ ++ ++ + ++Q D +D+ + GP
Sbjct: 1284 RTDGQLQLLLNGRSPLSATTRARIDALSHEHCRVFHVQADCADRPALTAALAPVLAQSGP 1343
Query: 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCY 373
IDG++H AG+ + ++L ++ + F +VL++KI T L+ L L L +C+
Sbjct: 1344 IDGLIHAAGLQA-SGSVLASSPEAFAAVLNAKIGATQVLDQVLAEQPLAL-------ICH 1395
Query: 374 FSSSSAILGDFGSCDYAMGNRFQTVXXXXXXXXXXXXXXXXXLITINWPLWNNSKFKIGN 433
FSSSSA+LGD G+C YAM NRFQ ++ INWPLW +G
Sbjct: 1396 FSSSSALLGDMGACSYAMANRFQQAYARYVQRGRARR-----VVAINWPLWREGGMALGE 1450
Query: 434 NEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGELEKLNQIINNI-APKVSX 492
E T+FY KSS Q++L +GL L Q++ D Q LVL+G+ +L Q++ I P
Sbjct: 1451 RESTEFYLKSSGQRMLESAEGLALLRQIVGSDIPQVLVLAGQPARLQQLLEGINQPTAKA 1510
Query: 493 XXXXXXX----------------XXXXXXXXDIKNHICNILNTKKSEIYKNKNLADYGFD 536
D++ L ++ + + NLAD+GFD
Sbjct: 1511 TAGQPATVLPRAPAHSRPELKGLSLEQSLAWDLRELASRPLQAERQSLEEECNLADFGFD 1570
Query: 537 SISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESK 596
SISLAE++ +L++ + L + P +FFS+STL +L + + H + Y +P+ T
Sbjct: 1571 SISLAEYAGLLNRHFGLTLTPEVFFSHSTLAKLAAHLLAQHRQAVEACYL--HPV-TRDP 1627
Query: 597 NISILYDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILI 656
+ + ++ + + + + E +AIIG+SGRFP AR +E W++L
Sbjct: 1628 QAEPEAQPETQPEAQPEAQPAPLTSSASASAPATEAMAIIGISGRFPGARTTDELWQVLA 1687
Query: 657 NNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMD 716
+D++SEIP + +DW+ +Y +P ++ K W GS+PGIDEFDPLFFEISP EA +D
Sbjct: 1688 EGRDMVSEIPPERYDWREHYGDPRENPTKTRCIWMGSVPGIDEFDPLFFEISPREATHLD 1747
Query: 717 PRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSA 776
PRQR LLQESW LEDAG GP Q+A Q++GMFVGVEEG ++Q + +LTS+HN IL++
Sbjct: 1748 PRQRLLLQESWNVLEDAGIGPRQLATQRVGMFVGVEEG-DFQRLAGEESLTSSHNGILAS 1806
Query: 777 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTS 836
RLAYF++L GP MAINTACSS+LVA H A SLR EC+ AI+AGVNL+ S +A+I MT
Sbjct: 1807 RLAYFLNLTGPTMAINTACSSALVALHQAASSLRNQECEMAIAAGVNLIFSADAFIGMTQ 1866
Query: 837 AGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTN 896
AGMLSPDGKC+ FD RANG+VP EAV V+LK L+RA +DGD I+ +R SG+NYDGKTN
Sbjct: 1867 AGMLSPDGKCFAFDHRANGMVPGEAVCCVLLKPLARAEADGDRIYGTLRASGLNYDGKTN 1926
Query: 897 GITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQ 956
GITAP+G+SQ L++ VY+++ ++ + ++YI+THGTGT+LGDPVEINAL+D F +
Sbjct: 1927 GITAPSGVSQQRLLEEVYRRAGIDTQAVDYIVTHGTGTQLGDPVEINALNDAFGGNSPGH 1986
Query: 957 KFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINK 1016
CA+TS K+N+GHTFAASGLVS+I+L+Q+++++ IPASLHCE+EN+YI + SPFY+NK
Sbjct: 1987 --CALTSTKTNLGHTFAASGLVSVISLLQALRHETIPASLHCEQENHYIQWQQSPFYVNK 2044
Query: 1017 SNKKWNTVN-EKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLS 1075
+NK W ++ R+GAVSAFGMSGTNAH+V+Q Y + + P +++VLS
Sbjct: 2045 ANKPWPQAGRDRERLGAVSAFGMSGTNAHVVVQSYSQ------RADDAALRRPCYVLVLS 2098
Query: 1076 AKTKISLKEKMKQILLFLRKNN--TVCIENFVYTLMQGRHHFQYRCA 1120
AKT +L+EK Q+ + L + + +TL++GRHHF+YR A
Sbjct: 2099 AKTAEALEEKAAQLNVALEQGGYRDAQMPAISHTLLEGRHHFRYRLA 2145
|
|
| UNIPROTKB|Q4KCD6 rzxD "Polyketide synthase RzxD" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 1196 (426.1 bits), Expect = 9.8e-120, P = 9.8e-120
Identities = 293/890 (32%), Positives = 448/890 (50%)
Query: 234 KQGGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQV 292
K G YLITGG G LG LF+ + + S LIL+GRS L + + N+ Y +
Sbjct: 1131 KDRGVYLITGGLGGLGRLFAQAIAARVSDATLILTGRSALAANGLAGIDAGRNRVYYQSL 1190
Query: 293 DVSDKLKMXXXXXXXXXXXGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
DVSD + +DGVLH AG+ S ++ VL++K++G+ L
Sbjct: 1191 DVSDAQAVQRLIDGIVAEHNGLDGVLHCAGVIR-DSLLINKQDDELRQVLAAKVAGSRNL 1249
Query: 353 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVXXXXXXXXXXXXXX 412
+ A L DF FSS + ++G+ G DYA N F
Sbjct: 1250 DLATAGLAL-------DFWICFSSGTGVVGNVGQADYAAANAFVDHYAAYRQQLTAQGLR 1302
Query: 413 XXXLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVL 472
+ INWPLW ++ + +S+ + N G+ Q + Q LV+
Sbjct: 1303 QGQSLAINWPLWKEGGMQV-DAATAQHMAQSTGMVAMPSNAGIHALRQCVALALPQVLVM 1361
Query: 473 SGELEKLNQIINNIA------PKVSXXXXXXXXXXXXXXXXDIKNHICNILNTKKSEIYK 526
G E + ++N P+ + + + +I
Sbjct: 1362 HGRREPMTALVNAATAAALPEPQPQALSAQPAAPLTEALQRALIEQVSAQMKIPAGDIRL 1421
Query: 527 NKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMI-KF- 584
+ + YGFDSISL + L + + L++ P+IFF ++T+ R Y + H + +F
Sbjct: 1422 DVEFSQYGFDSISLTTLANTLKQQWRLNLAPTIFFEHATVGRFSAYLEREHQAALAPRFA 1481
Query: 585 -YRNKYPLKTESKNISILYDNKINENYENVSK-KSNFILNKNTDINSEELIAIIGMSGRF 642
+ P L + VS + N+ I+ E IA+IG+SGRF
Sbjct: 1482 PQASAAPAAAAQPRQQALPTAAPGPR-DGVSGVRQTPAANR---IDDE--IAVIGISGRF 1535
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P A ++ +F+ L + +D ISEIP +DW+ YY +P + +K N KW G I G+D FDP
Sbjct: 1536 PMAEDVEQFFHNLKDGRDCISEIPANRWDWREYYGDPHREVDKTNVKWGGFIHGVDHFDP 1595
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLD 762
LFF ISP EA+ MDP+QR L+ WLA+EDAGY +A G+FVG + Y +
Sbjct: 1596 LFFAISPREAQLMDPQQRLLMTYVWLAIEDAGYASADLAGSDTGIFVGTGV-TGYSSLIA 1654
Query: 763 QVNL-------TSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECD 815
+ + T+ ++ R+++ +D GP + TACSSSLVA H A Q++ +C
Sbjct: 1655 KAGIPVEGYSATAMVPSVGPNRMSFLLDFHGPSEPVETACSSSLVAIHRAVQAIHSGDCA 1714
Query: 816 TAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 875
A+ GVN +I+PEA I+ + AGML+ DG+ F +ANG E V +VLK+ ++A +
Sbjct: 1715 MAVVGGVNTLIAPEAQISFSKAGMLALDGRSKTFSAQANGYARGEGVGMIVLKKRAQAEA 1774
Query: 876 DGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTK 935
DGD I+A+IR + N+ GK N +TAPN +Q EL+KS Y+K+ ++P + YI HGTGT+
Sbjct: 1775 DGDNIYALIRSTAENHGGKANSLTAPNPRAQAELLKSAYRKAGVDPRSVGYIEAHGTGTE 1834
Query: 936 LGDPVEINALHDVFK-------NKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIK 988
LGDP+EIN L F+ N+ Q +C + S KSN+GH A+G+ +I ++ +K
Sbjct: 1835 LGDPIEINGLKMAFRELNQELGNEALAQGYCGVGSVKSNMGHLELAAGIAGVIKVLLQLK 1894
Query: 989 YKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTV-----NEKLRIGAVSAFGMSGTNA 1043
+K + SLHCE+ N YI L NSPFY+ + N+ W + N+ R VS+FG G NA
Sbjct: 1895 HKTLFKSLHCEQLNPYIELDNSPFYVVQHNRPWAAIQDRQGNQLPRRAGVSSFGFGGANA 1954
Query: 1044 HIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFL 1093
H++L+EY + + + VLSA+T L+E ++++ F+
Sbjct: 1955 HVLLEEYRAPQVDRP-----LPATGARAFVLSARTPERLREAARRLVAFI 1999
|
|
| UNIPROTKB|Q4KCD7 rzxC "Polyketide synthase RzxC" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 1031 (368.0 bits), Expect = 4.3e-102, Sum P(2) = 4.3e-102
Identities = 280/911 (30%), Positives = 447/911 (49%)
Query: 234 KQGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNN---KAIY 289
K G YLITGG G LG++F+ + + LIL GRS L+S +L+ + +Y
Sbjct: 2849 KDRGVYLITGGAGGLGLIFARTIAEQCRDVTLILLGRSHLDSRQQAQLQAIRDLGAAVVY 2908
Query: 290 IQVDVSDKLKMXXXXXXXXXXXGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGT 349
+D++D + G ++GVLH AG++ + + ++ V ++K+ GT
Sbjct: 2909 QPLDLTDAQGLERLIAQICTAHGGLNGVLHGAGVNR-DRLLAQKTPQDVVEVFAAKVLGT 2967
Query: 350 IALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVXXXXXXXXXXX 409
L+ A L DF FSS SA+LG G DYA N F
Sbjct: 2968 DLLDRACRRLYL-------DFFVLFSSCSAVLGSVGQADYAAANAFIDQFAELRNLRVEQ 3020
Query: 410 XXXXXXLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 469
+++N+PLW + +I +Q + + + G++ + L +
Sbjct: 3021 GLRFGHTLSLNFPLWRDGGMQISAADQAHIR-QQTGMAPMQSVHGIQALQLGLSAGLARL 3079
Query: 470 LVLSGELEKLNQIINNIAPKVSXXX------XXXXXXXXXXXXXDIKNHICNILNTKKSE 523
LV+ G+L ++ P + +K C + +
Sbjct: 3080 LVIEGDLAQIRGQFGAAEPVDAQPAPGLPRVTVDPAQLSAAVLERLKAVFCAVTKLPPAR 3139
Query: 524 IYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLI--TYFIKNHNNTM 581
+ + L YG DSI + +R L + +S M + ERL+ T F + H+
Sbjct: 3140 VECDAPLEHYGIDSIMIIRLNRALEERFSA--MTQL----RPAERLLSKTLFFEYHSLNA 3193
Query: 582 IKFYRNKYPLKTESKNISILYDNKINEN---YENVSKKSNFILNKNTDINSEELIAIIGM 638
+ Y L E + +++ E V + S + + + + E IAIIG+
Sbjct: 3194 LSAY-----LVAEHQRACLIWSGLAEEAPIAAPAVGQASP--VPASMAMAAAEPIAIIGI 3246
Query: 639 SGRFPAARNINEFWKILINNKDVISEI-PEKIFDWKL--YYENPIKSSNK---INSKWYG 692
SGR+P A N++E+W+ L +D I+EI P++ W L +Y + + + K SKW G
Sbjct: 3247 SGRYPQAANLDEYWRNLKAGRDSITEIAPQR---WPLEGFYVDSVAEALKQARSYSKWGG 3303
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ---KIGMFV 749
I G +FDPLFF ISP EA MDP++R LQ W +LEDAG +A + +G+F
Sbjct: 3304 FIDGFADFDPLFFNISPREAVNMDPQERLFLQSCWQSLEDAGITKADLATKYQGNVGVFA 3363
Query: 750 GVEE-GSN-YQDRL-DQVNLTSTHNAILSA--RLAYFMDLKGPVMAINTACSSSLVATHI 804
G+ + G Y L +Q L + S R++Y +DL GP ++T CSSSL A H
Sbjct: 3364 GITKTGYGLYGPALREQGQLVFPRTSFGSTANRVSYVLDLNGPSEPVDTMCSSSLTALHR 3423
Query: 805 ACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVA 864
AC+SLR+ EC A + GVNL + P Y+ +++ MLS DG+C F E NG VP E V +
Sbjct: 3424 ACESLRRGECRMAFAGGVNLYLHPSNYVELSAGQMLSKDGRCRSFGEGGNGFVPGEGVGS 3483
Query: 865 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 924
++LK LS+AL+D D IH +IR +N+ GKTNG T PN +Q ++I+ ++ L+ I
Sbjct: 3484 LLLKPLSQALADRDNIHGVIRAVAVNHGGKTNGYTVPNPQAQAKVIRLAIDQAGLDASQI 3543
Query: 925 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLV 984
+YI HGTGT+LGDP+E++ L F CA+ S K+NIGH AA+G+ + ++
Sbjct: 3544 SYIEAHGTGTELGDPIEVSGLTQAFALDQVALGHCALGSVKANIGHLEAAAGIAGVSKVI 3603
Query: 985 QSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAH 1044
+K++ + SLH N + L +PFY+ ++ W N RI VS+FG G NAH
Sbjct: 3604 LQLKHRQLVPSLHAATLNPNLRLDATPFYLQQTLDDWQPANAGPRIAGVSSFGAGGANAH 3663
Query: 1045 IVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVC---I 1101
++LQE+ ++ + + ++ +++LSA+ L++ + +L ++ + +
Sbjct: 3664 VLLQEH--DEYRPMPH-----ASDAEVILLSARDADRLRDYAQALLAYIEARPGLSGADL 3716
Query: 1102 ENFVYTLMQGR 1112
N YTL GR
Sbjct: 3717 ANLAYTLQHGR 3727
|
|
| UNIPROTKB|Q4KCD8 rzxB "Polyketide synthase/nonribosomal peptide synthetase hybrid RzxB" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 881 (315.2 bits), Expect = 6.3e-87, Sum P(3) = 6.3e-87
Identities = 211/638 (33%), Positives = 342/638 (53%)
Query: 509 IKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLER 568
+K H + ++ I + YG S+ + E ++ L++ + ++ ++FF + ++
Sbjct: 1693 LKQHFSKVSAIPEASIDSLETFDRYGLTSLMITELNQRLAQGFG-ELSSTLFFEHQSIHA 1751
Query: 569 LITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDIN 628
L +F H + R++ L ++ S + ++ ++
Sbjct: 1752 LAIWFAAEHPS------RSRQLLGLQAPVASAAAPRQTASG-PDIERRQA---------- 1794
Query: 629 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINS 688
+E IAIIG++GRFP A +I FW L N D ISEIP + + YY KINS
Sbjct: 1795 CDEPIAIIGLAGRFPGAPDIERFWDNLKNGVDSISEIPAERWAHLQYYSRDRSLKGKINS 1854
Query: 689 KWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ---KI 745
KW G I +D FDPLFF ISP +AERMDP++R L+ +W LEDAGY + K+
Sbjct: 1855 KWGGFIDDVDRFDPLFFNISPRDAERMDPQERIFLETAWHTLEDAGYDRAALQRHYQGKM 1914
Query: 746 GMFVGVEEGSNYQDRLDQVNLTSTHNAI------LSARLAYFMDLKGPVMAINTACSSSL 799
G+FVGV G Y T +A+ ++ R++Y D GP MAI+T CSSSL
Sbjct: 1915 GVFVGVMHGE-YLLYTRSAAADCTDDAVDASFGSIANRVSYVFDCTGPSMAIDTICSSSL 1973
Query: 800 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPS 859
A H+A QSL++ EC A++ GVNL + P Y + M S DG+C F E +G VP
Sbjct: 1974 TALHLAVQSLKRGECRVALAGGVNLSLHPNKYFIQSQLTMSSSDGRCRSFGEGGDGFVPG 2033
Query: 860 EAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNL 919
E AV+LK LS+A +DGD I+ +IR + +N++GKT+G T P+ +Q +I +K+ +
Sbjct: 2034 EGAGAVLLKPLSQAQADGDNIYGVIRATSVNHNGKTHGYTVPSPNAQGAMIAESLEKAGM 2093
Query: 920 NPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN-------QKFCAITSNKSNIGHTF 972
NP +++YI HGTGT LGDP+EI+ L F ++ + CA+ S KSNIGH
Sbjct: 2094 NPRELSYIEAHGTGTALGDPIEISGLQQGFARRSAALGSEPAPAQQCALGSAKSNIGHLE 2153
Query: 973 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNT--VN----- 1025
+A+G+ + ++ +K++ + SLH + N I SPF+I + ++W +N
Sbjct: 2154 SAAGIAGVAKVLLQLKHRQLAPSLHSSRLNPGIAFDQSPFHIPQQLQEWRRPRLNLDGRE 2213
Query: 1026 -EKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKE 1084
E +VS+FG G+N H+++ +Y++ + + ++ P ++VLSA+T L++
Sbjct: 2214 REYPLAASVSSFGSGGSNGHVIIAQYLAP-----ERDEPVAGQPA-IIVLSARTPSQLQQ 2267
Query: 1085 KMKQILLFLRKNNTVC----IENFVYTLMQGRHHFQYR 1118
+++++ FL++ + + +TL QGR +YR
Sbjct: 2268 QVERLQQFLQRREQQGQLPRLADLAFTLQQGREALEYR 2305
|
|
| UNIPROTKB|Q4KCD3 rzxF "Polyketide synthase RzxF" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 821 (294.1 bits), Expect = 1.7e-101, Sum P(2) = 1.7e-101
Identities = 198/628 (31%), Positives = 340/628 (54%)
Query: 510 KNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERL 569
K + L +I + + YG DSI L E +R L + + + ++ + Y T+ L
Sbjct: 1385 KQLLSTTLKRPLEKIDSDASFERYGADSIMLTELTRQLERLFG-SLPNTLLYEYQTVREL 1443
Query: 570 ITYFIKNHNNTMIKFYRNK-YPLKTESKNISILYDNKINENYENVSKKSNFILNKNTDIN 628
YFI H + ++ R + + S++ + + N + + N
Sbjct: 1444 SAYFIGQHAQRLDQWLRPEGAKASAPGEETSLIAQAPVRQRARNRQQCETPAVAGN---- 1499
Query: 629 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINS 688
S +L AIIG+SGR+P A ++ FW L +D+ISE+P +D + Y++ +K
Sbjct: 1500 SRDL-AIIGISGRYPGAADLETFWHKLAGGEDLISEVPSARWDHQAYFDPARDRFDKTYC 1558
Query: 689 KWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIAN---QKI 745
KW G + G+++FDPLFF +SP EA ++P R L+ W LE AG QI Q++
Sbjct: 1559 KWGGFLEGVEDFDPLFFNLSPREAHIINPNDRLFLETCWNLLESAGLTRQQIQQRYQQQV 1618
Query: 746 GMFVGV--EEGSNYQDRLDQVNLTS-THNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
G+FVGV ++ ++ L + +L S T + ++ R++YF D +GP +AI+T CSSS+ A
Sbjct: 1619 GVFVGVMYQQYQAFESDLVRESLVSVTSYSAIANRVSYFFDFQGPSLAIDTMCSSSISAI 1678
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 862
H A ++LR +C AI+ GVNL + P+ YI ++ +L F + +G +P+E V
Sbjct: 1679 HAAGEALRNGDCRLAIAGGVNLTLHPKKYIGLSVGQVLGSHAGSRSFAD-GDGYLPAEGV 1737
Query: 863 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPE 922
AV+LK L+ A DGDPI A+I+ + +N+ G T+G + P+ Q LI S +K++ ++P
Sbjct: 1738 GAVLLKTLADAERDGDPILAVIKSTAVNHGGHTHGFSVPSAKLQAALIDSNFKRAGIDPC 1797
Query: 923 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLIN 982
++Y+ + G+++GD +E++AL VF + CAI S KSNIGH AASG+ +L
Sbjct: 1798 TLSYVESAANGSEMGDAIELSALSRVFSAAGVAPQSCAIGSVKSNIGHAEAASGMSALSK 1857
Query: 983 LVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW-------NTVNEKL-RIGAVS 1034
LV ++++ + SL + N + +SPF + ++ +W + V + + R +S
Sbjct: 1858 LVLQLQHRQLAPSLLLGELNPKLDFAHSPFVLQRTLTEWPQPVLEIDGVEQPVPRRACLS 1917
Query: 1035 AFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNP--YHMVVLSAKTKISLKEKMKQILLF 1092
AFG G+NAH++++EY S ++ +S P +V LSA + +L++ ++++
Sbjct: 1918 AFGAGGSNAHLIIEEYSSAPIPDLA-----ASEPGLLQIVPLSAHSSAALQQGLERLARH 1972
Query: 1093 LRKNNTVCIENFVYTLMQGRHHFQYRCA 1120
L ++ V +++ +TL GR R A
Sbjct: 1973 LDRHPQVRLQDLAHTLQNGREAMPLRLA 2000
|
|
| UNIPROTKB|Q10977 ppsA "Phthiocerol synthesis polyketide synthase type I PpsA" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 812 (290.9 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
Identities = 173/432 (40%), Positives = 253/432 (58%)
Query: 628 NS-EELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENP--IKSS 683
NS +E IA++GM RFP + E W L + IS++P + W+ + P + ++
Sbjct: 98 NSLDEPIAVVGMGCRFPGGISCPEALWDFLCERRSSISQVPPQ--RWQPFEGGPPEVAAA 155
Query: 684 NKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ 743
++W +P ID FD FFEISP EA++MDP+QR LL+ +W ALE AG P +
Sbjct: 156 LARTTRWGSFLPDIDAFDAEFFEISPSEADKMDPQQRLLLEVAWEALEHAGIPPGTLRRS 215
Query: 744 KIGMFVGV---EEGSNYQDRLDQVNLTSTHN---AILSARLAYFMDLKGPVMAINTACSS 797
G+F G E G+ L QV+ S +I++ RL+YF+DL+GP +A++TACSS
Sbjct: 216 ATGVFAGACLSEYGAMASADLSQVDGWSNSGGAMSIIANRLSYFLDLRGPSVAVDTACSS 275
Query: 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLV 857
SLVA H+ACQSLR +C AI+AGVNL++SP + G LSP G+C FD A+G V
Sbjct: 276 SLVAIHLACQSLRTQDCHLAIAAGVNLLLSPAVFRGFDQVGALSPTGQCRAFDATADGFV 335
Query: 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKS 917
E VVLKRL+ A DGD + A+I GS +N DG++NG+ APN +Q ++++ Y +
Sbjct: 336 RGEGAGVVVLKRLTDAQRDGDRVLAVICGSAVNQDGRSNGLMAPNPAAQMAVLRAAYTNA 395
Query: 918 NLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGL 977
+ P +++Y+ HGTGT LGDP+E AL V I S K+N+GHT AA+G+
Sbjct: 396 GMQPSEVDYVEAHGTGTLLGDPIEARALGTVLGRGRPEDSPLLIGSVKTNLGHTEAAAGI 455
Query: 978 VSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFG 1037
I V ++++ IP + H E N +I + + + +W R G VS+FG
Sbjct: 456 AGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQTEWPATGHPRRAG-VSSFG 514
Query: 1038 MSGTNAHIVLQE 1049
GTNAH+V+++
Sbjct: 515 FGGTNAHVVIEQ 526
|
|
| UNIPROTKB|Q7TXM0 ppsA "Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA" [Mycobacterium bovis AF2122/97 (taxid:233413)] | Back alignment and assigned GO terms |
|---|
Score = 806 (288.8 bits), Expect = 2.0e-80, Sum P(2) = 2.0e-80
Identities = 172/432 (39%), Positives = 252/432 (58%)
Query: 628 NS-EELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENP--IKSS 683
NS +E IA++GM RFP + E W L + IS++P + W+ + P + ++
Sbjct: 98 NSLDEPIAVVGMGCRFPGGISCPEALWDFLCERRSSISQVPPQ--RWQPFEGGPPEVAAA 155
Query: 684 NKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ 743
++W +P ID FD FFEISP EA++MDP+QR LL+ +W ALE AG P +
Sbjct: 156 LARTTRWGSFLPDIDAFDAEFFEISPSEADKMDPQQRLLLEVAWEALEHAGIPPGTLRRS 215
Query: 744 KIGMFVGV---EEGSNYQDRLDQVNLTSTHN---AILSARLAYFMDLKGPVMAINTACSS 797
G+F G E G+ L QV+ S +I++ RL+YF+DL+GP +A++TACSS
Sbjct: 216 ATGVFAGACLSEYGAMASADLSQVDGWSNSGGAMSIIANRLSYFLDLRGPSVAVDTACSS 275
Query: 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLV 857
SLVA H+ACQSLR +C AI+AGVNL++SP + G LSP G+C FD A+G V
Sbjct: 276 SLVAIHLACQSLRTQDCHLAIAAGVNLLLSPAVFRGFDQVGALSPTGQCRAFDATADGFV 335
Query: 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKS 917
E VVLKRL+ A DGD + A+I GS + DG++NG+ APN +Q ++++ Y +
Sbjct: 336 RGEGAGVVVLKRLTDAQRDGDRVLAVICGSAVTQDGRSNGLMAPNPAAQMAVLRAAYTNA 395
Query: 918 NLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGL 977
+ P +++Y+ HGTGT LGDP+E AL V I S K+N+GHT AA+G+
Sbjct: 396 GMQPSEVDYVEAHGTGTLLGDPIEARALGTVLGRGRPEDSPLLIGSVKTNLGHTEAAAGI 455
Query: 978 VSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFG 1037
I V ++++ IP + H E N +I + + + +W R G VS+FG
Sbjct: 456 AGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQTEWPATGHPRRAG-VSSFG 514
Query: 1038 MSGTNAHIVLQE 1049
GTNAH+V+++
Sbjct: 515 FGGTNAHVVIEQ 526
|
|
| UNIPROTKB|Q10978 ppsB "Phthiocerol synthesis polyketide synthase type I PpsB" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 816 (292.3 bits), Expect = 3.2e-80, P = 3.2e-80
Identities = 165/427 (38%), Positives = 257/427 (60%)
Query: 631 ELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSK 689
E +A++G+ RFP + E FW L+ ++ IS +P +D + +Y + ++ +K
Sbjct: 34 EPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYHPDPLTPGRMTTK 93
Query: 690 WYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV 749
W G +P + FD FF I+P EA MDP+QR LL+ +W ALE AG P+ + + + +
Sbjct: 94 WGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPPDSLGGTRTAVMM 153
Query: 750 GVEEGSNYQDRL-------DQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
GV + YQ L D + T ++I R++Y + L+GP +A++TACSSSLVA
Sbjct: 154 GVYF-NEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAVDTACSSSLVAV 212
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 862
H+ACQSLR E D A++ GV++ + PE IA+++ G+LSP G+C FD A+G V E
Sbjct: 213 HLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDAAADGFVRGEGA 272
Query: 863 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPE 922
VVLKRL+ A+ DGD + A++RGS +N DG++NG+TAPN +Q ++I + ++ P+
Sbjct: 273 GVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIADALRSGDVAPD 332
Query: 923 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLIN 982
+NY+ HGTGT LGDP+E AL + + CA+ + K+NIGH AA+G+ I
Sbjct: 333 SVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHLEAAAGIAGFIK 389
Query: 983 LVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTN 1042
+++ IP +LH + N I ++ F++ N W T E R AVS+FG+ GTN
Sbjct: 390 ATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTA-EGPRRAAVSSFGLGGTN 448
Query: 1043 AHIVLQE 1049
AH+++++
Sbjct: 449 AHVIIEQ 455
|
|
| UNIPROTKB|Q7TXL9 ppsB "Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB" [Mycobacterium bovis AF2122/97 (taxid:233413)] | Back alignment and assigned GO terms |
|---|
Score = 816 (292.3 bits), Expect = 3.2e-80, P = 3.2e-80
Identities = 165/427 (38%), Positives = 257/427 (60%)
Query: 631 ELIAIIGMSGRFPAARNINE-FWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSK 689
E +A++G+ RFP + E FW L+ ++ IS +P +D + +Y + ++ +K
Sbjct: 34 EPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYHPDPLTPGRMTTK 93
Query: 690 WYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV 749
W G +P + FD FF I+P EA MDP+QR LL+ +W ALE AG P+ + + + +
Sbjct: 94 WGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPPDSLGGTRTAVMM 153
Query: 750 GVEEGSNYQDRL-------DQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
GV + YQ L D + T ++I R++Y + L+GP +A++TACSSSLVA
Sbjct: 154 GVYF-NEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAVDTACSSSLVAV 212
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 862
H+ACQSLR E D A++ GV++ + PE IA+++ G+LSP G+C FD A+G V E
Sbjct: 213 HLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDAAADGFVRGEGA 272
Query: 863 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPE 922
VVLKRL+ A+ DGD + A++RGS +N DG++NG+TAPN +Q ++I + ++ P+
Sbjct: 273 GVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIADALRSGDVAPD 332
Query: 923 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLIN 982
+NY+ HGTGT LGDP+E AL + + CA+ + K+NIGH AA+G+ I
Sbjct: 333 SVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHLEAAAGIAGFIK 389
Query: 983 LVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTN 1042
+++ IP +LH + N I ++ F++ N W T E R AVS+FG+ GTN
Sbjct: 390 ATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTA-EGPRRAAVSSFGLGGTN 448
Query: 1043 AHIVLQE 1049
AH+++++
Sbjct: 449 AHVIIEQ 455
|
|
| UNIPROTKB|O53490 pks12 "Probable polyketide synthase pks12" [Mycobacterium tuberculosis H37Rv (taxid:83332)] | Back alignment and assigned GO terms |
|---|
Score = 741 (265.9 bits), Expect = 2.6e-79, Sum P(4) = 2.6e-79
Identities = 169/497 (34%), Positives = 291/497 (58%)
Query: 629 SEELIAIIGMSGRFPAARNI-NEFWKILINNKDVISEIP-EKIFDWK-LYYENPIKSSNK 685
SE+ IAI+GM+ R+P N ++ W +LI +DV+SE P ++ +D LY +P ++
Sbjct: 2055 SEDPIAIVGMACRYPGGVNSPDDMWDMLIQGRDVLSEFPADRGWDLAGLYNPDP-DAAGA 2113
Query: 686 INSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKI 745
++ G + G+ +FDP FF + P EA MDP+ R LL+ SW ALE AG P +
Sbjct: 2114 CYTRTGGFVDGVGDFDPAFFGVGPSEALAMDPQHRMLLELSWEALERAGIDPTGLRGSAT 2173
Query: 746 GMFVGVEE---GSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
G+F GV G + ++ LT +++ S R+AY + L+GP ++++TACSSSLVA
Sbjct: 2174 GVFAGVMTQGYGMFAAEPVEGFRLTGQLSSVASGRVAYVLGLEGPAVSVDTACSSSLVAL 2233
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 862
H+A SLR ECD A++ GV + +P+ ++ + LSPDG+C F A+G SE
Sbjct: 2234 HMAVGSLRSGECDLALAGGVTVNATPDIFVEFSRWRGLSPDGRCKAFAAAADGTGFSEGG 2293
Query: 863 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPE 922
+VL+RLS A G P+ A++ GS +N DG +NG+TAPNG SQ ++++ + L+
Sbjct: 2294 GMLVLQRLSDARRLGHPVLAVVVGSAVNQDGASNGLTAPNGPSQQRVVRAALANAGLSAA 2353
Query: 923 DINYIITHGTGTKLGDPVEINALHDVF-KNKTYNQKFCAITSNKSNIGHTFAASGLVSLI 981
+++ + HGTGT LGDP+E AL + +++ + + S KSN+GHT AA+G+ +I
Sbjct: 2354 EVDVVEGHGTGTTLGDPIEAQALLATYGQDRGEPGEPLWLGSVKSNMGHTQAAAGVAGVI 2413
Query: 982 NLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGT 1041
+V +++++++PA+LH + + ++ + + + W + R VS+FG+SGT
Sbjct: 2414 KMVLAMRHELLPATLHVDVPSPHVDWSAGAVELLTAPRVW-PAGARTRRAGVSSFGISGT 2472
Query: 1042 NAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCI 1101
NAH+++ E + + + P V+SAK++ +L+ + ++ ++R ++ + +
Sbjct: 2473 NAHVII-EAVPV----VPRREAGWAGPVVPWVVSAKSESALRGQAARLAAYVRGDDGLDV 2527
Query: 1102 ENFVYTLMQGRHHFQYR 1118
+ ++L GR F++R
Sbjct: 2528 ADVGWSLA-GRSVFEHR 2543
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1152 | |||
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 0.0 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 0.0 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 1e-147 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 2e-83 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 1e-62 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 9e-59 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 3e-57 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 2e-53 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 6e-48 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 3e-46 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 4e-43 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 2e-38 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 5e-36 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 1e-34 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 5e-34 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 4e-33 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 1e-32 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 8e-31 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 8e-30 | |
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 1e-29 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 6e-26 | |
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 4e-25 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 2e-24 | |
| cd08955 | 376 | cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase ( | 4e-21 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 1e-20 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 1e-20 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 2e-20 | |
| cd05274 | 375 | cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt | 1e-19 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 3e-19 | |
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 5e-19 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 2e-17 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 2e-15 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 3e-14 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 5e-14 | |
| cd08954 | 452 | cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase ( | 2e-12 | |
| pfam00550 | 66 | pfam00550, PP-binding, Phosphopantetheine attachme | 6e-09 | |
| cd08956 | 448 | cd08956, KR_3_FAS_SDR_x, beta-ketoacyl reductase ( | 3e-08 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 2e-07 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 1e-06 | |
| smart00823 | 86 | smart00823, PKS_PP, Phosphopantetheine attachment | 3e-06 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 2e-05 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 2e-05 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 5e-05 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 1e-04 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 1e-04 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 2e-04 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 2e-04 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 4e-04 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 0.001 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 0.001 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 0.002 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.003 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 0.003 | |
| COG0236 | 80 | COG0236, AcpP, Acyl carrier protein [Lipid metabol | 0.004 | |
| PRK07851 | 406 | PRK07851, PRK07851, acetyl-CoA acetyltransferase; | 0.004 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 587 bits (1517), Expect = 0.0
Identities = 202/422 (47%), Positives = 271/422 (64%), Gaps = 10/422 (2%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
IAI+GM+ RFP A + +EFW+ L+ +D ISEIPE +D YY +P K K ++ G
Sbjct: 3 IAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKP-GKTYTRRGG 61
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
+ +D FD FF ISP EAE MDP+QR LL+ +W ALEDAGY P +A + G+FVG
Sbjct: 62 FLDDVDAFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGAS 121
Query: 753 EGSNYQDRLDQVN-------LTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIA 805
S+Y + L + T T A L+ R++YF DL+GP + ++TACSSSLVA H+A
Sbjct: 122 -SSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTACSSSLVALHLA 180
Query: 806 CQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAV 865
CQSLR ECD A+ GVNL++SP+ ++ + AGMLSPDG+C FD A+G V E V V
Sbjct: 181 CQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV 240
Query: 866 VLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDIN 925
VLKRLS AL DGD I+A+IRGS +N DG+T GITAP+G +Q LI+ Y ++ ++P DI+
Sbjct: 241 VLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDID 300
Query: 926 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQ 985
Y+ HGTGT LGDP+E+ AL VF + I S KSNIGH AA+GL LI +V
Sbjct: 301 YVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVL 360
Query: 986 SIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHI 1045
++++ +IP +LH E N I + SP + + W R G VS+FG GTNAH+
Sbjct: 361 ALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAPAGPRRAG-VSSFGFGGTNAHV 419
Query: 1046 VL 1047
+L
Sbjct: 420 IL 421
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 581 bits (1500), Expect = 0.0
Identities = 211/526 (40%), Positives = 296/526 (56%), Gaps = 18/526 (3%)
Query: 628 NSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKIN 687
E IAIIGM+ RFP A + EFW +L +D I+E+P +D YY+ K
Sbjct: 1 QLIEPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSY 60
Query: 688 SKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGM 747
S+W G + +D+FD LFF ISP EAE MDP+QR LL+ +W ALEDAG P+ + G+
Sbjct: 61 SRWGGFLDDVDDFDALFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGV 120
Query: 748 FVGVEEGSNYQDRL-------DQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLV 800
F G Y L + +T +++ + R++Y + L GP + ++TACSSSLV
Sbjct: 121 FAGASVAD-YLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGPSVTVDTACSSSLV 179
Query: 801 ATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSE 860
A H+ACQSLR ECD A++ GVNL++SPE+ ++ GMLSPDG+C FD A+G V E
Sbjct: 180 AVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGE 239
Query: 861 AVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLN 920
VVLKRLS A DGD I+A+IRGS +N DG++NG+TAPN +Q ++I+ + ++
Sbjct: 240 GAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGID 299
Query: 921 PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSL 980
P + Y+ HGTGT LGDP+E NAL V+ Q CAI S KSNIGH AA+G+ L
Sbjct: 300 PATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQ-PCAIGSVKSNIGHLEAAAGIAGL 358
Query: 981 INLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSG 1040
I ++K+ IP +LH + N I +SPF + W T R VS+FG G
Sbjct: 359 IKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTGGGPRR-AGVSSFGFGG 417
Query: 1041 TNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN-NTV 1099
TNAH++L+E + ++VLSAKT L ++ L +
Sbjct: 418 TNAHVILEEA-------PPRAESTIPSSPRLLVLSAKTAERLAATAPRLADRLELQGGLL 470
Query: 1100 CIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKILH 1145
+ + YTL GR HF++R A++ + EE+ + K K L
Sbjct: 471 SLADVAYTLQAGRPHFEHRLAVVANDREELEAGLRAFAAGKAKALS 516
|
Length = 1061 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 444 bits (1144), Expect = e-147
Identities = 157/417 (37%), Positives = 207/417 (49%), Gaps = 119/417 (28%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
IAI+GMS RFP A + EFW +L+
Sbjct: 1 IAIVGMSCRFPGADDPEEFWDLLLA----------------------------------- 25
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
+ +D FD FF ISP EAE MDP+QR LL+ +W ALEDAG P + + G+FVGV
Sbjct: 26 GLDDVDLFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGV- 84
Query: 753 EGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQH 812
+ D Y + ++TACSSSLVA H+ACQSLR
Sbjct: 85 ---SSSD--------------------Y-------SVTVDTACSSSLVALHLACQSLRSG 114
Query: 813 ECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 872
ECD A++ GVNL++SP+ ++ ++ AGMLSPDG+C FD A+G V E V VVLKRLS
Sbjct: 115 ECDMALAGGVNLILSPDTFVGLSRAGMLSPDGRCKTFDASADGYVRGEGVGVVVLKRLSD 174
Query: 873 ALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932
AL DGDPI A+IRGS +N DG++NGITAP+G +Q
Sbjct: 175 ALRDGDPILAVIRGSAVNQDGRSNGITAPSGPAQ-------------------------- 208
Query: 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKII 992
I S KSNIGH AA+G+ LI +V ++K+ +I
Sbjct: 209 --------------------------LLIGSVKSNIGHLEAAAGVAGLIKVVLALKHGVI 242
Query: 993 PASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049
P +LH E N +I L+ SP + W + R VS+FG GTNAH++L+E
Sbjct: 243 PPTLHFETPNPHIDLEESPLRVPTELTPWPP-PGRPRRAGVSSFGFGGTNAHVILEE 298
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 271 bits (694), Expect = 2e-83
Identities = 99/257 (38%), Positives = 137/257 (53%), Gaps = 33/257 (12%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
+AI GM RFP EFW++L+ +D I E P D Y + G
Sbjct: 4 VAITGMGCRFPGGVGPEEFWELLLAGRDAIREFPA---DLSGLYPPSRVA---------G 51
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI-ANQKIGMFVGV 751
I G +FD FF ISP EAE MDP+QR L+ +W ALEDAG P + + + G+FVG
Sbjct: 52 EIYG-FDFDAAFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPASLRGSDRTGVFVG- 109
Query: 752 EEGSNYQDRLDQVNLTSTHN--------------AILSARLAYFMDLKGPVMAINTACSS 797
S D + L S ++ + R++Y + L+GP + ++TACSS
Sbjct: 110 ---SGSGDYAELQALDSAGGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSS 166
Query: 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAG-MLSPDGKCYVFDERANGL 856
SLVA H A +S+R+ ECD A++ GV ++P + ++AG +LSPDG C FD A+G
Sbjct: 167 SLVALHAAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDGPCKAFDPFADGF 226
Query: 857 VPSEAVVAVVLKRLSRA 873
V E V AV+LK LS A
Sbjct: 227 VRGEGVGAVLLKELSEA 243
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 216 bits (551), Expect = 1e-62
Identities = 83/337 (24%), Positives = 149/337 (44%), Gaps = 24/337 (7%)
Query: 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVG-----VEEGSNYQDRLDQVN---LTSTH 770
+ + A+ DAG N +G+ VG D + V +T
Sbjct: 12 SILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAM 71
Query: 771 NAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEA 830
S ++A + + GP ++ AC+ SL A +A +++ + D ++ G + +P
Sbjct: 72 FPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMD 131
Query: 831 YIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN 890
+ +P+ FD A+G V + A+V++ L AL+ G I+A I G+
Sbjct: 132 CEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAAT 191
Query: 891 YDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFK 950
DG G AP+ K + L DI+Y++ HGTGT +GD E+ L F
Sbjct: 192 IDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFG 251
Query: 951 NKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 1010
+K+ A+++ K+ G+ +A+ ++++ V +++ IP S+H E+ + +
Sbjct: 252 DKSP-----AVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGL---- 302
Query: 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 1047
N T +LR ++ FG+ GTNA +VL
Sbjct: 303 -------NIVTETTPRELRTALLNGFGLGGTNATLVL 332
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 207 bits (530), Expect = 9e-59
Identities = 107/425 (25%), Positives = 177/425 (41%), Gaps = 51/425 (12%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P + EFW+ L+ + I I FD + S+ G +P D D
Sbjct: 13 PLGNGVEEFWEALLAGRSGIRPITR--FDASGFP-----------SRIAGEVPDFDPEDY 59
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGS------- 755
+ E RMD + L + AL DAG P ++ ++IG+ +G G
Sbjct: 60 ----LDRKELRRMDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEA 115
Query: 756 --NYQDRLDQVNLTSTHNAIL----SARLAYFMDLKGPVMAINTACSSSLVATHIACQSL 809
++ + L + ++A + L+GP ++TAC+S A A + +
Sbjct: 116 YRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLI 175
Query: 810 RQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLVPSEAVVA 864
R D I+ G +I+P + LS P+ FD+ +G V E
Sbjct: 176 RLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGV 235
Query: 865 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKKSNLNPE 922
+VL+ L A + G I+A I G G + D ITAP +G +++ + L+PE
Sbjct: 236 LVLESLEHAKARGAKIYAEILGYGASSDA--YHITAPDPDGEGAARAMRAALADAGLSPE 293
Query: 923 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLIN 982
DI+YI HGT T L D E A+ VF ++S KS GH A+G V I
Sbjct: 294 DIDYINAHGTSTPLNDAAESKAIKRVFGEHAKK---VPVSSTKSMTGHLLGAAGAVEAIA 350
Query: 983 LVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTN 1042
+ +++ ++P +++ E+ + L Y+ ++ +R ++FG G N
Sbjct: 351 TLLALRDGVLPPTINLEEPDPECDLD----YVPNEAREA-----PIRYALSNSFGFGGHN 401
Query: 1043 AHIVL 1047
A +V
Sbjct: 402 ASLVF 406
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 217 bits (555), Expect = 3e-57
Identities = 135/456 (29%), Positives = 213/456 (46%), Gaps = 40/456 (8%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
IAI+GM+ F +R +N+FW ++ D I+++P + YY++ ++K K G
Sbjct: 9 IAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGG 68
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
+P +D F+P+ F + P E D Q L + L DAG P+ KIG+ +GV
Sbjct: 69 FLPEVD-FNPMEFGLPPNILELTDISQLLSLVVAKEVLNDAGL-PDGYDRDKIGITLGVG 126
Query: 753 EG----SNYQDRLDQVNLTSTHNA---------------------------------ILS 775
G S+ RL L A ++S
Sbjct: 127 GGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWEENSFPGSLGNVIS 186
Query: 776 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMT 835
R+A DL G ++ AC+ SL A +A L + + I+ GV SP Y++ +
Sbjct: 187 GRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFS 246
Query: 836 SAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKT 895
+ + FD + G++ E + + LKRL A DGD I+A+I+G G + DGK
Sbjct: 247 KTPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKF 306
Query: 896 NGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN 955
I AP Q + +K Y + P I HGTGT GD E L VF
Sbjct: 307 KSIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQ 366
Query: 956 QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 1015
++ A+ S KS IGHT + +G +I V ++ +K++P +++ ++ N + ++NSPFY+N
Sbjct: 367 KQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLN 426
Query: 1016 KSNKKW-NTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050
+ W + R +S+FG GTN H+VL+EY
Sbjct: 427 TETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 192 bits (491), Expect = 2e-53
Identities = 112/439 (25%), Positives = 173/439 (39%), Gaps = 53/439 (12%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
+ I G+ + E W L+ K I I FD + K G
Sbjct: 5 VVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITR--FDAS-----------GLGVKIAG 51
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
I +D+ I+ E MD + + + ALEDAG + ++G+ +G
Sbjct: 52 EIKDLDDQ------IAKKERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSG 105
Query: 753 EGS--NYQDRLDQVNLTSTHNAI------------LSARLAYFMDLKGPVMAINTACSSS 798
G + + LD + L I + +A LKGP TAC++
Sbjct: 106 IGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATG 165
Query: 799 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERA 853
A A + +R + D I+ G I+P + LS P+ FD+
Sbjct: 166 AHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNR 225
Query: 854 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIK 911
+G V E A+VL+ L AL+ G I+A I G G D ITAP +G ++
Sbjct: 226 DGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDA--YHITAPAPDGEGAIRAMR 283
Query: 912 SVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHT 971
+ + L PEDI+YI HGT T D E A+ VF + ++S KS GHT
Sbjct: 284 AALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSL---PVSSTKSLTGHT 340
Query: 972 FAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIG 1031
A+G V I + +++ IIP ++ N ++ + +R
Sbjct: 341 LGAAGAVEAIISLLALRDGIIPPTI------NLDNPDPEAADLDVVPNE--ARTGAVRAA 392
Query: 1032 AVSAFGMSGTNAHIVLQEY 1050
++FG GTNA +V + Y
Sbjct: 393 LSNSFGFGGTNASLVFKRY 411
|
Length = 412 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 6e-48
Identities = 73/248 (29%), Positives = 105/248 (42%), Gaps = 20/248 (8%)
Query: 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSII------YKKLKKFNNK 286
+K GG YL+TGG G +G + L +Y L+L GRS L L+ +
Sbjct: 202 LKPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR 261
Query: 287 AIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKI 346
+YI DV+D + + + G IDGV+H AG+ + +F +VL+ K+
Sbjct: 262 VLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAE-DFEAVLAPKV 320
Query: 347 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNK 406
G + L AL + LDF FSS SA G G DYA N F +A YL
Sbjct: 321 DGLLNLAQALAD-------EPLDFFVLFSSVSAFFGGAGQADYAAANAFLDAFAAYLRQ- 372
Query: 407 NIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466
+ ++++INWP W + + +GL+ EQ L D
Sbjct: 373 ---RGPQGRVLSINWPAWREGGMAADL--GARELLARAGLLPIEPEEGLQALEQALSSDL 427
Query: 467 IQYLVLSG 474
Q LV G
Sbjct: 428 PQVLVSPG 435
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 3e-46
Identities = 53/120 (44%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Query: 881 HAIIRGSGINYDG-KTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 939
+A+IRGS +N DG NG+TAPNG +Q I++ + L+PED++Y+ HGTGT LGDP
Sbjct: 1 YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60
Query: 940 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 999
+E AL VF +Q + S KSNIGH AA+G+ LI V ++++ +IP +L+ +
Sbjct: 61 IEAEALKAVFGPGRDSQ-PLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNLD 119
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 4e-43
Identities = 84/337 (24%), Positives = 143/337 (42%), Gaps = 30/337 (8%)
Query: 729 ALEDAGYGPNQ-IANQKIGMFVG------VEEGSNYQDRLDQVNLTSTHNAILSARLA-- 779
AL DAG + ++G+ VG + VN + +LS
Sbjct: 83 ALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAG 142
Query: 780 ----YFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPE---AYI 832
+ GP+ AC+++L A +A +++R + D + GV E +
Sbjct: 143 WVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVED-PLEEGLSGFA 201
Query: 833 AM--TSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN 890
M S P+ FDE +G V +E +VL+R AL+ G PI+ + G+
Sbjct: 202 NMGALSTAEEEPEEMSRPFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTAST 261
Query: 891 YDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFK 950
DG + A G I++ K+ L+ +D++ I HGT T D E A+ +V
Sbjct: 262 TDGAGRSVPAG-GKGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320
Query: 951 NKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 1010
+T+ K+ GH+ A+G + LI +QS+++ +IP + + + +
Sbjct: 321 ALGAPL---PVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVD---PDVEH 374
Query: 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 1047
+ S +N K+R V+AFG G+NA +VL
Sbjct: 375 LSVVGLSRD----LNLKVRAALVNAFGFGGSNAALVL 407
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 144 bits (364), Expect = 2e-38
Identities = 71/332 (21%), Positives = 117/332 (35%), Gaps = 85/332 (25%)
Query: 718 RQRHLLQESWL-ALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSA 776
L E+ A+ DAG I +G G E S +
Sbjct: 6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSG-----------------AAG 48
Query: 777 RLAYFMDLK-GPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMT 835
+LAY + + GP ++N AC++ L A +A Q ++ + D ++ G
Sbjct: 49 QLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE----------- 97
Query: 836 SAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKT 895
V + A V++ AL G A I + +DG +
Sbjct: 98 --------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGAS 137
Query: 896 NGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN 955
+ A +G + + + L P DI+Y+ HGTGT +GD VE+ D
Sbjct: 138 -MVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPD-----G 191
Query: 956 QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 1015
+ A+++ GH A+GL L L+ ++++ IP
Sbjct: 192 VRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIP---------------------- 229
Query: 1016 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 1047
+ R + FG+ GTNA +VL
Sbjct: 230 -------PTPREPRTVLLLGFGLGGTNAAVVL 254
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 5e-36
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS----IIYKKLKKFNNKAIYIQV 292
GTYLITGG G LG + +L + + L+L RS ++ + +L+ + +
Sbjct: 1 GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVAC 60
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
DV+D+ + + + +I GP+ GV+H AG+ + + F +VL+ K +G L
Sbjct: 61 DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGV-LASLTPERFAAVLAPKAAGAWNL 119
Query: 353 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKY 412
+ + LDF FSS + +LG G +YA N F A+Y +
Sbjct: 120 HELTADL-------PLDFFVLFSSIAGVLGSPGQANYAAANAFLDALAEYRRARG----- 167
Query: 413 TNKL--ITINWPLW 424
L ++I W W
Sbjct: 168 ---LPALSIAWGAW 178
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 1e-34
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 20/193 (10%)
Query: 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS-----IIYKKLKKFNNKAIYIQ 291
GTYL+TGG G LG+ + +L + + +L+L RS ++ +L+ + +
Sbjct: 1 GTYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL-AELEARGAEVTVVA 59
Query: 292 VDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA 351
DVSD+ + + + I + P+ GV+H AG+ + ++F VL+ K++G
Sbjct: 60 CDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDAL-LANMTAEDFARVLAPKVTGAWN 118
Query: 352 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKK 411
L+ A + LDF FSS + +LG G +YA N F A Y + +
Sbjct: 119 LHEATRDR-------PLDFFVLFSSIAGVLGSPGQANYAAANAFLDALAHYRRAQGL--- 168
Query: 412 YTNKLITINWPLW 424
+INW W
Sbjct: 169 ---PATSINWGPW 178
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 5e-34
Identities = 92/340 (27%), Positives = 141/340 (41%), Gaps = 46/340 (13%)
Query: 729 ALEDAGYGP-------------------NQIANQKIGMFVGVEEGSNYQDRLDQVNLTST 769
AL+DAG P ++A Q +E + ++ LD T
Sbjct: 67 ALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLD----TLP 122
Query: 770 H-NAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISP 828
H AI +AR +GPV+A AC++ L A + ++ +C I+ V I+P
Sbjct: 123 HQAAIAAARQI---GTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITP 179
Query: 829 EAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSG 888
G L+ G Y FD + GLV E +VL+ A G I+ I G G
Sbjct: 180 LTLAGFQQMGALAKTG-AYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYGQILGFG 238
Query: 889 INYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV 948
+ D P+G S I+ +S L PEDI+YI HGT T+L D E N + +
Sbjct: 239 LTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQAL 298
Query: 949 FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008
F ++ A++S K GHT ASG + + + +++++ +P C + L+
Sbjct: 299 FPHRV------AVSSTKGATGHTLGASGALGVAFSLLALRHQQLPP---C------VGLQ 343
Query: 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048
F +N L+ +FG G NA I L
Sbjct: 344 EPEFDLNFVR---QAQQSPLQNVLCLSFGFGGQNAAIALG 380
|
Length = 381 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 132 bits (336), Expect = 4e-33
Identities = 113/434 (26%), Positives = 187/434 (43%), Gaps = 69/434 (15%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P + EFW+ L+ K I I FD ++ + K G + FDP
Sbjct: 13 PLGNGVEEFWENLLAGKSGIGPI--TRFD-----------ASDLPVKIAGEVKD---FDP 56
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV-----GVEEGSNY 757
+ I EA RMD ++ L + A+ED+G + +++G+ + G+E
Sbjct: 57 EDY-IDKKEARRMDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQ 115
Query: 758 QDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
L + +N+ + +I KGP A+ TAC++ A
Sbjct: 116 HIVLLEKGPRRVSPFFIPMSIINMAAGQISI-------RYGAKGPNHAVVTACATGTHAI 168
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 857
A + +++ + D I+ G I+P + LS P+ FD+ +G V
Sbjct: 169 GDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFV 228
Query: 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYK 915
E +VL+ L A + G I+A I G G++ D ITAP G +++ K
Sbjct: 229 MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDA--YHITAPAPEGEGAARAMRAALK 286
Query: 916 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 975
+ +NPED++YI HGT T LGD E A+ VF + Y A++S KS GH A+
Sbjct: 287 DAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYK---LAVSSTKSMTGHLLGAA 343
Query: 976 GLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIG-AVS 1034
G + I V +++ I+P +++ + + L P N++ + +I A+S
Sbjct: 344 GAIEAIFTVLALRDGIVPPTINLDNPDPECDLDYVP---NEA--------REAKIDYALS 392
Query: 1035 -AFGMSGTNAHIVL 1047
+FG G NA +V
Sbjct: 393 NSFGFGGHNASLVF 406
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 1e-32
Identities = 103/442 (23%), Positives = 175/442 (39%), Gaps = 58/442 (13%)
Query: 643 PAARNINEFWKILINNKDVISEIPE-------KIFDWKLYYENPIKSSNKINSKWYGSIP 695
P W+ LI K I ++ E I + K +I ++ S
Sbjct: 4 PLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQS-- 61
Query: 696 GIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVGVEEG 754
EFDP F + E + + AL DA +Q +IG+ +G G
Sbjct: 62 ---EFDPSDFAPTKRE----SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIG 114
Query: 755 S----------NYQDRLDQVN-------LTSTHNAILSARLAYFMDLKGPVMAINTACSS 797
S Y+ +V+ L + +++ + LKGP + TAC++
Sbjct: 115 SLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH----KLKGPSGSAVTACAT 170
Query: 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDE 851
A + ++ E D I G I+P ++ + L P FD+
Sbjct: 171 GAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDK 230
Query: 852 RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTEL 909
G V E +VL+ L AL G I+A IRG G + D + ITAP +G
Sbjct: 231 DRAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDA--HHITAPHPDGRGARRC 288
Query: 910 IKSVYKKS-NLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNI 968
+++ K N+N D++Y+ H T T +GD +E+ A+ VF + + ++S K +
Sbjct: 289 MENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPK--LYVSSTKGGL 346
Query: 969 GHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKL 1028
GH A+G V I + S+ +IIP +++ E ++ +N K + +
Sbjct: 347 GHLLGAAGAVESIVTILSLYEQIIPPTINLEN-------PDAECDLNLVQGKTAHPLQSI 399
Query: 1029 RIGAVSAFGMSGTNAHIVLQEY 1050
++FG G N ++ +Y
Sbjct: 400 DAVLSTSFGFGGVNTALLFTKY 421
|
Length = 421 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 8e-31
Identities = 104/463 (22%), Positives = 184/463 (39%), Gaps = 89/463 (19%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
I + GM P + FW+ L+ + I + + + +K G
Sbjct: 6 IVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVG-------------DLATKIGG 52
Query: 693 SIPGIDE-----FDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQK--- 744
+P + E FDP + + P + +MD + + AL AG+ P+ + +++
Sbjct: 53 QVPDLAEDAEAGFDPDRY-LDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTA 111
Query: 745 ------IGMFVGVEEGSNYQDRLDQ---------------VNLTSTHNAILSARLAYFMD 783
+G F + E LD N+ + H +I R +
Sbjct: 112 TIIGSGVGGFPAIAEA---VRTLDSRGPRRLSPFTIPSFLTNMAAGHVSI---RYGF--- 162
Query: 784 LKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-- 841
KGP+ A TAC++ + A A + +R E D A+ G I + +A LS
Sbjct: 163 -KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTR 221
Query: 842 ----PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNG 897
P+ FD +G V E +V++ L AL+ G P A + G G + D
Sbjct: 222 FNDAPEQASRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYH-- 279
Query: 898 ITAP--NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN 955
+TA +G + +++ + PE++ ++ H T T +GD E+ A+ VF +
Sbjct: 280 MTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG----H 335
Query: 956 QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE------KENNYIILKN 1009
A++S KS GH A+G V I + +++ +I P +L+ E + + + K
Sbjct: 336 VSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKA 395
Query: 1010 SPFYINKSNKKWNTVNEKLRIGAVS-AFGMSGTNAHIVLQEYI 1051
P ++ A+S FG G NA I+ + +
Sbjct: 396 RPMDMDY---------------ALSNGFGFGGVNASILFRRWE 423
|
Length = 424 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 8e-30
Identities = 114/438 (26%), Positives = 183/438 (41%), Gaps = 71/438 (16%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P ++ WK L+ K I I L K G + F+P
Sbjct: 14 PLGNDVESTWKNLLAGKSGIGPI-THFDTSDL------------AVKIAGEVKD---FNP 57
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVG--------VEEG 754
+ +S EA RMD ++ + + A+EDAG + +IG+ +G +EE
Sbjct: 58 DDY-MSRKEARRMDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQ 116
Query: 755 SNYQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSL 799
L + +N+ + H +I KGP +I TAC++
Sbjct: 117 ---HITLLEKGPRRVSPFFVPMAIINMAAGHVSIR-------YGAKGPNHSIVTACATGA 166
Query: 800 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERAN 854
A A + + + D ++ G I+P +A LS P+ FD+ +
Sbjct: 167 HAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRD 226
Query: 855 GLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKS 912
G V E +VL+ L A + G I+A + G G+ D +TAP +G +K
Sbjct: 227 GFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYH--MTAPAPDGEGAARAMKL 284
Query: 913 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 972
K + +NPEDI+YI HGT T GD E A+ VF Y A++S KS GH
Sbjct: 285 ALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYK---VAVSSTKSMTGHLL 341
Query: 973 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGA 1032
A+G V I V +I+ ++IP +++ + + L P N++ ++ K+
Sbjct: 342 GAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVP---NEARER------KIDYAL 392
Query: 1033 VSAFGMSGTNAHIVLQEY 1050
++FG GTNA +V + Y
Sbjct: 393 SNSFGFGGTNASLVFKRY 410
|
Length = 411 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-29
Identities = 84/288 (29%), Positives = 127/288 (44%), Gaps = 43/288 (14%)
Query: 723 LQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTST---HNAILSARLA 779
+E+W DA GP +IG+ VG GSN Q R +Q + T A L
Sbjct: 88 AREAW---RDAALGPVDPD--RIGLVVG---GSNLQQR-EQALVHETYRDRPAFLRPSYG 138
Query: 780 -YFMD------------LKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLM- 825
FMD ++G + A +S +A A + ++ D I+ G LM
Sbjct: 139 LSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVG-ALMD 197
Query: 826 ISPEAYIAMTSAG-MLS------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGD 878
+S A+ S G M S P+ C FD+ +G + EA AVVL+ A G
Sbjct: 198 LSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIYGEACGAVVLESAESARRRGA 257
Query: 879 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 938
+A + G + D P+ + +I++ +++ L PEDI+Y+ HGTG+ LGD
Sbjct: 258 RPYAKLLGWSMRLDANRG--PDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLGD 315
Query: 939 PVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLI-NLVQ 985
E+ AL + I + KS GH +A+G+V LI L+Q
Sbjct: 316 ETELAALFASGLAHAW------INATKSLTGHGLSAAGIVELIATLLQ 357
|
Length = 410 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 6e-26
Identities = 101/373 (27%), Positives = 162/373 (43%), Gaps = 64/373 (17%)
Query: 692 GSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV 751
G PG PLF P+E E W A +A VG
Sbjct: 95 GDFPG-----PLFLAAPPVELE-------------WPARF-------ALAAA-----VGD 124
Query: 752 EEGSNYQDRLDQVNLTSTHNAI--------LSARLAYFMDLKGPVMAINTACSSSLVATH 803
+ +Y DRL + +A+ ++ RLA +G ++++TAC+S A
Sbjct: 125 NDAPSY-DRLLRAARGGRFDALHERFQFGSIADRLADRFGTRGLPISLSTACASGATAIQ 183
Query: 804 IACQSLRQHECDTAISAGVNLMISPEAYI--AMTSAGMLS-----PDGKCYVFDERANGL 856
+ +++R+ E D A+ + +S EA I ++ SA LS P+ F + +G
Sbjct: 184 LGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSA--LSTQNDPPEKASKPFSKDRDGF 241
Query: 857 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKK 916
V +E A+VL+ L A++ G I I+ G G D ++P+G I++
Sbjct: 242 VMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALAD 301
Query: 917 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASG 976
+ L PE I+YI HGT T D +E L VF + + ++SNKS IGHT A+G
Sbjct: 302 AGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLAS---IPVSSNKSMIGHTLTAAG 358
Query: 977 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV--S 1034
V + + +I+ +P +++ + + I L P N R+ AV +
Sbjct: 359 AVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVP------NVA-----RDARVTAVLSN 407
Query: 1035 AFGMSGTNAHIVL 1047
+FG G NA +VL
Sbjct: 408 SFGFGGQNASLVL 420
|
Length = 425 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 4e-25
Identities = 106/458 (23%), Positives = 180/458 (39%), Gaps = 75/458 (16%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEI-----PEKIFDWKLYYENPIKSSNKIN 687
+ + G+ P + W+ LI + + + K D E + + +++
Sbjct: 8 VVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSED----EETQLYTLDQLP 63
Query: 688 SKWYGSIP---GIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGP-NQIANQ 743
S+ +P G +FD E L + + L + AL DA + P A +
Sbjct: 64 SRVAALVPRGTGPGDFD----EELWLNSRSSSRFIGYALCAADEALSDARWLPSEDEAKE 119
Query: 744 KIGMFVGVEEGS-------------NYQDRLDQ-------VNLTSTHNAILSARLAYFMD 783
+ G+ +G GS RL +N+ + H +S R
Sbjct: 120 RTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGH---VSIRYG---- 172
Query: 784 LKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-- 841
+GP A TAC++ + A + ++ + D ++ G I + + + LS
Sbjct: 173 FQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTK 232
Query: 842 ----PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNG 897
P FD +G V E +VL+ L A G I+A +RG G++ D +
Sbjct: 233 FNSCPTEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDA--HH 290
Query: 898 ITAP--NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN 955
IT P +G + ++S L+P ++Y+ H T T LGD VE A+ VF +
Sbjct: 291 ITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATS 350
Query: 956 QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEK-----ENNYIILKNS 1010
A +S K GH A+G V I V +I + I P +L+ E+ ++ ++ L S
Sbjct: 351 GGL-AFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTAS 409
Query: 1011 PFYINKSNKKWNTVNEKLRIGAVS-AFGMSGTNAHIVL 1047
L A+S +FG GTNA ++
Sbjct: 410 K--------------AMLIRAALSNSFGFGGTNASLLF 433
|
Length = 437 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 2e-24
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 25/294 (8%)
Query: 764 VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVN 823
VNL + H +I KGP+ A TAC++ + A A + +R +E D A+ G
Sbjct: 67 VNLAAGHVSIKH-------HFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAE 119
Query: 824 LMISPEAYIAMTSAGMLS------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 877
+I + +A LS P+ FD +G V E ++++ L AL+ G
Sbjct: 120 AVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDGFVMGEGAGLLIIEELEHALARG 179
Query: 878 DPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937
A I G G + D A +G +K +++ + PE + ++ H T T +G
Sbjct: 180 AKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVG 239
Query: 938 DPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLH 997
D EINA+ +F AITS KS GH A+G + I V +++ +I+PA+L+
Sbjct: 240 DLGEINAIKHLFGESNA----LAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLN 295
Query: 998 CEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051
E + P + N + + FG +G NA I+L+ ++
Sbjct: 296 LENPD--------PAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKRWV 341
|
Length = 342 |
| >gnl|CDD|187658 cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 2, complex (x) | Back alignment and domain information |
|---|
Score = 96.6 bits (241), Expect = 4e-21
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYI---QVD 293
TYLITGG G LG+L +++L+ + + +L+L+GR ++ + + + D
Sbjct: 150 ATYLITGGLGGLGLLVAEWLVERGARHLVLTGRRAPSAAARQAIAALEEAGAEVVVLAAD 209
Query: 294 VSDKLKMISEINSIINNIGPIDGVLHIAGI--SGLTSNILEANYKNFYSVLSSKISGTIA 351
VSD+ + + + I ++ P+ GV+H AG+ G+ +N F VL+ K+ G
Sbjct: 210 VSDRDALAAALAQIRASLPPLRGVIHAAGVLDDGVLANQDWE---RFRKVLAPKVQGAWN 266
Query: 352 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395
L+ ++ LDF FSS +++LG G +YA N F
Sbjct: 267 LHQLTQD-------LPLDFFVLFSSVASLLGSPGQANYAAANAF 303
|
Ketoreductase, a module of the multidomain polyketide synthase, has 2 subdomains, each corresponding to a short-chain dehydrogenases/reductase (SDR) family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerizes but is composed of 2 subdomains, each resembling an SDR monomer. In some instances, as in porcine FAS, an enoyl reductase (a Rossman fold NAD binding domain of the MDR family) module is inserted between the sub-domains. The active site resembles that of typical SDRs, except that the usual positions of the catalytic asparagine and tyrosine are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular polyketide synthases are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) fatty acid synthase. In some instances, such as porcine FAS , an enoyl reductase module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER). Polyketide syntheses also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes the KR domain of the Lyngbya majuscule Jam J, -K, and #L which are encoded on the jam gene cluster and are involved in the synthesis of the Jamaicamides (neurotoxins); Lyngbya majuscule Jam P belongs to a different KR_FAS_SDR_x subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 376 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 1e-20
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS----KLNSIIYKKLKKFNNKAIYIQV 292
GT LITGGTG LG+ + +L + + +L+L R ++ +L+ +
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELV-AELEALGAEVTVAAC 59
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
DV+D+ + + + ++ +GP+DGV+H AG+ + E + F VL+ K++G L
Sbjct: 60 DVADRDALAALLAALPAALGPLDGVVHNAGVLDDG-PLEELTPERFERVLAPKVTGAWNL 118
Query: 353 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395
+ + L FSS + +LG G +YA N
Sbjct: 119 HEL-------TRDLDLGAFVLFSSVAGVLGSPGQANYAAANAA 154
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 1e-20
Identities = 78/273 (28%), Positives = 114/273 (41%), Gaps = 38/273 (13%)
Query: 728 LALEDAG-YGPNQIANQKIGMFVGVEEGSN-----YQDRL---DQVNLTST-------HN 771
LALEDAG G + + ++G+ G GS + L +T+T H
Sbjct: 83 LALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHT 142
Query: 772 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAY 831
+ + F LKG V+ ++AC+S A ++++ ++ G + EA
Sbjct: 143 T--AVNVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAA 200
Query: 832 I--------AMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAI 883
+ A L+P FD +GLV E +VL+ L A + G I+A
Sbjct: 201 VFDTLFATSTRNDAPELTPRP----FDANRDGLVIGEGAGTLVLEELEHAKARGATIYAE 256
Query: 884 IRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 943
I G G N DG +T P + ++ K + L PEDI Y+ HGT T GD E
Sbjct: 257 IVGFGTNSDGAH--VTQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQ 314
Query: 944 ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASG 976
A VF + I+S KS GHT A G
Sbjct: 315 ATAAVFGARM------PISSLKSYFGHTLGACG 341
|
Length = 405 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 94.8 bits (236), Expect = 2e-20
Identities = 76/281 (27%), Positives = 112/281 (39%), Gaps = 38/281 (13%)
Query: 785 KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS--PEAYIAMTSAGMLS- 841
K V+ +AC+S A A + + E D AI GV I P A A M +
Sbjct: 161 KAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTN 220
Query: 842 ---PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGI 898
P G C FD+ +G V E +V++ A + G I A I G+ I DG
Sbjct: 221 NDDPAGACRPFDKDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVA 280
Query: 899 TAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 958
PNG + + + L P DI+++ H TGT +GD E A+ N
Sbjct: 281 PDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAI-----NNALGGHR 335
Query: 959 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI---ILKNSP---- 1011
A+ + KS +GH+ A G V I V +++ +IP +L+ E + I ++ P
Sbjct: 336 PAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGN 395
Query: 1012 --FYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050
+ IN S FG G N + Y
Sbjct: 396 YRYAINNS------------------FGFGGHNVALAFGRY 418
|
Length = 418 |
| >gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs | Back alignment and domain information |
|---|
Score = 92.1 bits (229), Expect = 1e-19
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYI---Q 291
GTYLITGG G LG+L + +L + + +L+L R + + +
Sbjct: 149 LDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVR 208
Query: 292 VDVSDK--LK-MISEINSIINNIGPIDGVLHIAGI--SGLTSNILEANYKNFYSVLSSKI 346
DV+D L +++E+ GP+ GV+H AG+ L + + A F +VL++K+
Sbjct: 209 CDVTDPAALAALLAELA----AGGPLAGVIHAAGVLRDALLAELTPAA---FAAVLAAKV 261
Query: 347 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYA 400
+G + L E T LDF FSS +A+LG G YA N F A
Sbjct: 262 AGALNL---HELT----PDLPLDFFVLFSSVAALLGGAGQAAYAAANAFLDALA 308
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 3e-19
Identities = 93/442 (21%), Positives = 179/442 (40%), Gaps = 51/442 (11%)
Query: 629 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINS 688
S+ + + GM P + WK L+ + I I FD + ++
Sbjct: 2 SKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEH--FD-----------TTNFST 48
Query: 689 KWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMF 748
++ G + F+ + +S +A +MD ++ + AL+D+G + +IG+
Sbjct: 49 RFAGLVKD---FNCEEY-MSKKDARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVA 104
Query: 749 VG----------------VEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAIN 792
+G VE+G ++ + ST +++ L+ L+GP +AI+
Sbjct: 105 IGSGIGGLGLIEAGHQALVEKGPR---KVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAIS 161
Query: 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCY 847
TAC++ L A + + + D ++ G +P +A LS P
Sbjct: 162 TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASR 221
Query: 848 VFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQT 907
+D+ +G V + +VL+ A + G I+A + G G++ D + +G
Sbjct: 222 PWDKDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGA 281
Query: 908 ELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSN 967
+++ + + + E I Y+ HGT T GD EI + Q ++S KS
Sbjct: 282 LAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVL--VSSTKSM 339
Query: 968 IGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEK 1027
GH A+G V I V S+ +I+P +++ + + + P K E
Sbjct: 340 TGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKV--------ES 391
Query: 1028 LRIGAVSAFGMSGTNAHIVLQE 1049
+ ++FG GTN ++ ++
Sbjct: 392 MEYAICNSFGFGGTNGSLIFKK 413
|
Length = 414 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 92.0 bits (228), Expect = 5e-19
Identities = 113/459 (24%), Positives = 178/459 (38%), Gaps = 68/459 (14%)
Query: 622 NKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIK 681
K ++ + GM P + + F+ L+ ISEI FD + P +
Sbjct: 121 KKKPLTKQRRVV-VTGMGVVSPLGHDPDVFYNNLLEGVSGISEIER--FDCSQF---PTR 174
Query: 682 SSNKINS----KWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGP 737
+ +I S W ++P ++RMD +LL AL D G
Sbjct: 175 IAGEIKSFSTDGW----------------VAPKLSKRMDKFMLYLLTAGKKALADGGITE 218
Query: 738 ---NQIANQKIGMFVGVEEGSN--YQDRLDQVNLT-----------STHNAILSARLAYF 781
++ K G+ +G G + D ++ + ++ +T N + SA LA
Sbjct: 219 DVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTN-MGSAMLA-- 275
Query: 782 MDL--KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGM 839
MDL GP +I+TAC++S A + + E D + G + I P +
Sbjct: 276 MDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRA 335
Query: 840 LS-----PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGK 894
LS P +D +G V E ++L+ L A G I+A G D
Sbjct: 336 LSQRNDDPTKASRPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAY 395
Query: 895 TNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTY 954
P G I+ +S ++ ED+NYI H T TK GD E AL F
Sbjct: 396 HMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ--- 452
Query: 955 NQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYI 1014
N + + S KS IGH A+G V I VQ+I+ + +++ E + + K +
Sbjct: 453 NPEL-RVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTK----VL 507
Query: 1015 NKSNKKWNTVNEKLRIGAV--SAFGMSGTNAHIVLQEYI 1051
K E+L I ++FG G N+ I+ Y
Sbjct: 508 VGPKK------ERLDIKVALSNSFGFGGHNSSILFAPYK 540
|
Length = 540 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 85.9 bits (213), Expect = 2e-17
Identities = 86/346 (24%), Positives = 150/346 (43%), Gaps = 47/346 (13%)
Query: 729 ALEDAGYGPNQIANQKIGMFVGVEEGSNYQ--------------DRLDQVNLTSTHNAIL 774
A+ DAG Q++N + G+ G GS R+ +T + +
Sbjct: 82 AIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTV 141
Query: 775 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGV-----NLMISPE 829
SA LA +KG +I++AC++S A + ++ + D + G + +
Sbjct: 142 SACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFD 201
Query: 830 AYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGI 889
A A+++ +P+ +D +G V + VV++ L AL+ G I+A I G G
Sbjct: 202 AMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGA 261
Query: 890 NYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVF 949
DG + AP+G ++ + I+YI THGT T +GD E+ A+ +VF
Sbjct: 262 TSDGYD--MVAPSGEGAVRCMQMALATVD---TPIDYINTHGTSTPVGDVKELGAIREVF 316
Query: 950 KNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEK-----ENNY 1004
+K+ AI++ KS GH+ A+G+ I + +++ I S + E+
Sbjct: 317 GDKS-----PAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMP 371
Query: 1005 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050
I+ + N + TV ++FG GTNA +V + Y
Sbjct: 372 IVTE------TTDNAELTTV-------MSNSFGFGGTNATLVFRRY 404
|
Length = 406 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 2e-15
Identities = 94/373 (25%), Positives = 163/373 (43%), Gaps = 37/373 (9%)
Query: 697 IDEFDPLFFEISPLEAERMDPRQRHL-LQESWLALEDAGYGPNQIANQK--------IGM 747
I +FDP + P E ++ D R L L+ + A++DAG+ P ++ ++ IG
Sbjct: 52 ITDFDPTEV-MDPKEVKKAD-RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGG 109
Query: 748 FVGVEEGSNY-----QDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
+E+ S ++ + S +L ++ LKGP ++ TAC++ A
Sbjct: 110 LPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAI 169
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 857
A +++ D + G I P + LS P FD+ +G V
Sbjct: 170 IEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFV 229
Query: 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKS 917
E A+VL+ A G I+A I G G G N IT+P +K+ + +
Sbjct: 230 MGEGAGALVLEEYESAKKRGAKIYAEIIGFG--ESGDANHITSPAPEGPLRAMKAALEMA 287
Query: 918 NLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGL 977
NP+ I+YI HGT T D E AL ++F +K +K ++S K IGH A+G
Sbjct: 288 G-NPK-IDYINAHGTSTPYNDKNETAALKELFGSK---EKVPPVSSTKGQIGHCLGAAGA 342
Query: 978 VSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFG 1037
+ + + +++ I+P +++ E + L P N + K +L + ++FG
Sbjct: 343 IEAVISIMAMRDGILPPTINQETPDPECDLDYIP---NVARKA------ELNVVMSNSFG 393
Query: 1038 MSGTNAHIVLQEY 1050
GTN ++ ++
Sbjct: 394 FGGTNGVVIFKKV 406
|
Length = 406 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 3e-14
Identities = 85/370 (22%), Positives = 147/370 (39%), Gaps = 53/370 (14%)
Query: 650 EFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709
E+WK +++ + + I FD Y P + + G +P D + L + P
Sbjct: 20 EYWKAVLDGRSGLGPITR--FDPSGY---PARLA--------GEVPDFDAAEHLPGRLLP 66
Query: 710 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV-----GVEEGSNYQDRLDQV 764
+ D R L + AL DAG P + +G+ G E G Q L
Sbjct: 67 ----QTDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFG---QRELQ-- 117
Query: 765 NLTSTHNAILSA--RLAYFM-----------DLKGPVMAINTACSSSLVATHIACQSLRQ 811
L S +SA A+F ++GP + + L A A + +R+
Sbjct: 118 KLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRR 177
Query: 812 HECDTAISAGVNLMISPEAYIAMTSAGMLSPDG---KCYV-FDERANGLVPSEAVVAVVL 867
+S GV+ + P ++A S+G LS + Y+ FD A G VP E +VL
Sbjct: 178 GTP-LVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGGAILVL 236
Query: 868 KRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYI 927
+ + A G ++ I G +D G P G+++ I+ + L PED++ +
Sbjct: 237 EDAAAARERGARVYGEIAGYAATFDPPP-GSGRPPGLAR--AIRLALADAGLTPEDVDVV 293
Query: 928 ITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSI 987
G D E AL VF + +T+ K+ G +A + + + ++
Sbjct: 294 FADAAGVPELDRAEAAALAAVFGPRG-----VPVTAPKTMTGRLYAGGAPLDVATALLAL 348
Query: 988 KYKIIPASLH 997
+ +IP +++
Sbjct: 349 RDGVIPPTVN 358
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 74.9 bits (185), Expect = 5e-14
Identities = 66/226 (29%), Positives = 95/226 (42%), Gaps = 30/226 (13%)
Query: 779 AYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMT--- 835
AY L GP I+TACSSS A + L CD AI GV+ + +T
Sbjct: 145 AYL-GLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLC------RLTLNG 197
Query: 836 --SAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDG 893
S LSP C F +G+ EA A L L R D + + G G + D
Sbjct: 198 FNSLESLSP-QPCRPFSANRDGINIGEAA-AFFL--LERE--DDAAV--ALLGVGESSDA 249
Query: 894 KTNGITAPN--GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKN 951
+ ++AP+ G+ ++ + L P DI YI HGT T L D +E A+ VF +
Sbjct: 250 --HHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD 307
Query: 952 KTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLH 997
+S K GHT A+G V ++++ + P +
Sbjct: 308 GV------PCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWN 347
|
Length = 392 |
| >gnl|CDD|187657 cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 2e-12
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 230 NSYIKQGGTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLN---SIIYKKLKKFNN 285
N I G +YLITGG+G LG+ +L+ + + N+I+ RS + ++ ++ K N
Sbjct: 212 NYPINLGKSYLITGGSGGLGLEILKWLVKRGAVENIIILSRSGMKWELELLIREWKSQNI 271
Query: 286 KAIYIQVDVSDKLKMISEINSIIN--NIGPIDGVLHIAGISGLTSNILEANYKN-FYSVL 342
K ++ VDVSD + IN I+N IGPI G+ H+A + L +LE + ++ F SV
Sbjct: 272 KFHFVSVDVSDVSSLEKAINLILNAPKIGPIGGIFHLAFV--LIDKVLEIDTESLFISVN 329
Query: 343 SSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKY 402
+K+ G I L+ +I + K LD+ FSS S+I G G C+Y N ++Y
Sbjct: 330 KAKVMGAINLH---NQSIKRCWK--LDYFVLFSSVSSIRGSAGQCNYVCANSVLDSLSRY 384
Query: 403 L 403
Sbjct: 385 R 385
|
NADP-dependent KR domain of the multidomain type I FAS, a complex SDR family. This subfamily also includes proteins identified as polyketide synthase (PKS), a protein with related modular protein architecture and similar function. It includes the KR domains of mammalian and chicken FAS, and Dictyostelium discoideum putative polyketide synthases (PKSs). These KR domains contain two subdomains, each of which is related to SDR Rossmann fold domains. However, while the C-terminal subdomain has an active site similar to the other SDRs and a NADP-binding capability, the N-terminal SDR-like subdomain is truncated and lacks these functions, serving a supportive structural role. In some instances, such as porcine FAS, an enoyl reductase (a Rossman fold NAD-binding domain of the medium-chain dehydrogenase/reductase, MDR family) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER); this KR and ER are members of the SDR family. This KR subfamily has an active site tetrad with a similar 3D orientation compared to archetypical SDRs, but the active site Lys and Asn residue positions are swapped. The characteristic NADP-binding is typical of the multidomain complex SDRs, with a GGXGXXG NADP binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 452 |
| >gnl|CDD|215989 pfam00550, PP-binding, Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Score = 52.9 bits (128), Expect = 6e-09
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 509 IKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLER 568
++ + +L EI + +L D G DS+ E L + + ++I PS F + TL
Sbjct: 3 LREIVAEVLGIP-DEIDPDDDLFDLGLDSLLAVELLARLEEEFGVEIPPSDLFEHPTLGE 61
Query: 569 LITYF 573
L Y
Sbjct: 62 LAAYL 66
|
A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Vibrio anguillarum angR has the attachment serine replaced by an alanine. Length = 66 |
| >gnl|CDD|187659 cd08956, KR_3_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 3, complex (x) | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 3e-08
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 66/190 (34%)
Query: 237 GTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRS---------------KLNSIIYKKL 280
GT LITGGTG LG L + +L+ ++ +L+L R L
Sbjct: 194 GTVLITGGTGTLGALLARHLVTEHGVRHLLLVSRRGPDAPGAAELVAELAALG------- 246
Query: 281 KKFNNKAIYIQV-----DVSDKLKMISEINSIINNI---GPIDGVLHIAG------ISGL 326
A +V DV+D+ + + +++ + P+ V+H AG ++ L
Sbjct: 247 ------A---EVTVAACDVADR----AALAALLAAVPADHPLTAVVHAAGVLDDGVLTSL 293
Query: 327 TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLD-FVCYFSSSSAILGDFG 385
T L+A VL K+ L+ E T + L FV FSS++ +LG G
Sbjct: 294 TPERLDA-------VLRPKVDAAWHLH---ELT----RDLDLAAFV-LFSSAAGVLGSPG 338
Query: 386 SCDYAMGNRF 395
+YA N F
Sbjct: 339 QANYAAANAF 348
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta- ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes KR domains found in many multidomain PKSs, including six of seven Sorangium cellulosum PKSs (encoded by spiDEFGHIJ) which participate in the synthesis of the polyketide scaffold of the cytotoxic spiroketal polyketide spirangien. These seven PKSs have either a single PKS module (SpiF), two PKR modules (SpiD,-E,-I,-J), or three PKS modules (SpiG,-H). This subfamily includes the second KR domains of SpiE,-G, I, and -J, both KR domains of SpiD, and the third KR domain of SpiH. The single KR domain of SpiF, the first and second KR domains of SpiH, the first KR domains of SpiE,-G,- I, and -J, and the third KR domain of SpiG, belong to a different KR_FAS_SDR subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 448 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 2e-07
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 18/186 (9%)
Query: 287 AIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKI 346
A Y DV++ + + + + +N I G++H AG+ +I + + F +V +K+
Sbjct: 2096 AEYASADVTNSVSVAATV-QPLNKTLQITGIIHGAGVLA-DKHIQDKTLEEFNAVYGTKV 2153
Query: 347 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNK 406
G L + + L + + FSS++ G+ G DYAM N A L
Sbjct: 2154 DG-------LLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKAL 2206
Query: 407 NIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLF-EQLLIQD 465
N + K+++ NW W+ N F V+ + G +LF QLL
Sbjct: 2207 NP----SAKVMSFNWGPWDGGMV----NPALKKMFNDRGVYVIPLDAGAELFVSQLLSDT 2258
Query: 466 KIQYLV 471
Q LV
Sbjct: 2259 GAQLLV 2264
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 1e-06
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 10/161 (6%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---KLNSIIYKKLKKFNNKAIYIQ 291
G L+TG + +G + L + + ++ + RS ++ + +A +
Sbjct: 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVA 63
Query: 292 VDVSDKLKMISE-INSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTI 350
DVSD + + + + G ID +++ AGI+G + + E +++ V+ + G
Sbjct: 64 ADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAF 123
Query: 351 ALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391
L A L K + SS + + G G YA
Sbjct: 124 LLTRAA------LPLMKKQRIVNISSVAGLGGPPGQAAYAA 158
|
Length = 251 |
| >gnl|CDD|214834 smart00823, PKS_PP, Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 3e-06
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 530 LADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITY 572
D G DS+ E L L + ++ F + T L +
Sbjct: 39 FRDLGLDSLMAVELRNRLEAATGLRLPATLVFDHPTPAALAEH 81
|
Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. Length = 86 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 2e-05
Identities = 23/121 (19%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 240 LITGGTGRLGM----LFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVS 295
L+TG + +G + + ++L+ R++ ++ A+ +Q DVS
Sbjct: 2 LVTGASSGIGRAIARRLA-----REGAKVVLADRNEEALAELAAIEALGGNAVAVQADVS 56
Query: 296 DKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYA 355
D+ + + + + G +D +++ AGI+ + E +++ VL ++G L A
Sbjct: 57 DEEDVEALVEEALEEFGRLDILVNNAGIARP-GPLEELTDEDWDRVLDVNLTGVFLLTRA 115
Query: 356 L 356
Sbjct: 116 A 116
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 2e-05
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 14/123 (11%)
Query: 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQ 291
+G T LITG + +G + L + NLIL R KL ++ + K + I
Sbjct: 4 MKGKTALITGASSGIGAELAKQLARR-GYNLILVARREDKLEALAKELEDKTGVEVEVIP 62
Query: 292 VDVSDKLKMISEI-NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTI 350
D+SD + + + + + GPID +++ AG G LE + + I
Sbjct: 63 ADLSD-PEALERLEDELKERGGPIDVLVNNAGF-GTFGPFLELSLD--------EEEEMI 112
Query: 351 ALN 353
LN
Sbjct: 113 QLN 115
|
Length = 265 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 5e-05
Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 12/184 (6%)
Query: 240 LITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDK 297
LITG + +G + N+ L+ R L+ + +L N +DV+D+
Sbjct: 2 LITGASSGIGRALAREFAKA-GYNVALAARRTDRLDELK-AELLNPNPSVEVEILDVTDE 59
Query: 298 LKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA-LNYAL 356
+ I + +G +D V+ AG+ G +++ + ++K F + + + G A L AL
Sbjct: 60 ERNQLVIAELEAELGGLDLVIINAGV-GKGTSLGDLSFKAFRETIDTNLLGAAAILEAAL 118
Query: 357 ENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKL 416
+ + + SS +A+ G G+ Y+ + A+ L KK ++
Sbjct: 119 P----QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYD--VKKRGIRV 172
Query: 417 ITIN 420
IN
Sbjct: 173 TVIN 176
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-04
Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 18/98 (18%)
Query: 729 ALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-P 787
AL+DAG P I + VG G +Q A +A ++ L G P
Sbjct: 27 ALDDAGLEPADI----DAVVVGNAAGGRFQS-------------FPGALIAEYLGLLGKP 69
Query: 788 VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLM 825
+ A +S A A ++ D + G M
Sbjct: 70 ATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKM 107
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 22/166 (13%)
Query: 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNN---KAIYI 290
G LITGG+ +G + L+ + N+I+ RS KL + + + N K YI
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKE-GANVIIVARSESKLEEAVEEIEAEANASGQKVSYI 59
Query: 291 QVDVSDKLKMISEINSIINNIGPIDGVLHIAGIS------GLTSNILEANYKNFYSVLSS 344
D+SD ++ + GP D V++ AGIS LT+ E Y
Sbjct: 60 SADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNY----- 114
Query: 345 KISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390
G++ + +++ + + + SS +A++G +G Y
Sbjct: 115 --FGSL---NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYC 155
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-04
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
+G L+TG + +G + L + +I S + + ++K +A DV
Sbjct: 4 KGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDV 63
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354
SD+ + + + +I + G ID +++ AGI E + V+ ++G ++
Sbjct: 64 SDEEAIKAAVEAIEEDFGKIDILVNNAGI-IRRHPAEEFPEAEWRDVIDVNLNGVFFVSQ 122
Query: 355 A 355
A
Sbjct: 123 A 123
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
+ LITG G +G F L++ LIL+ + L + + + N+ I +++
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLS-AGARLILADINAPALEQLKEELTNLYKNRVIALEL 59
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGIS--GLTSNILEANYKNFYSVLSSKISGTI 350
D++ K + I S + G ID +++ A S S E Y+ + VL+ + G
Sbjct: 60 DITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 4e-04
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 787 PVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKC 846
P + IN C S L A +A Q++R + D ++ GV M A + ++ + + G
Sbjct: 78 PAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESM--SNAPYVLPASRVGARMGDA 135
Query: 847 YVFDERA 853
+ D
Sbjct: 136 KLVDTML 142
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 0.001
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 772 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGV----NLMIS 827
A L+A L + P + +N AC+S L A +A Q++ E D ++ GV + +
Sbjct: 73 AALAAGLPGSV----PAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMG 128
Query: 828 PEAYIAMTSAG 838
E + SA
Sbjct: 129 REGVRVLDSAV 139
|
Length = 392 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
G T LITGGT +G+ + + +T +I++GR + + KK I +DV
Sbjct: 4 TGNTVLITGGTSGIGLALARKFLEAGNT-VIITGRREER---LAEAKKELPNIHTIVLDV 59
Query: 295 SDK----------LKMISEINSIINNIG 312
D L ++ +INN G
Sbjct: 60 GDAESVEALAEALLSEYPNLDILINNAG 87
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDV 294
G ++TGG+ +G+ + L + I+ + ++L KK+ K + DV
Sbjct: 8 GKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDV 67
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGT 349
S + + I + G ID ++ AGI+ L+ Y+ + V+ ++G
Sbjct: 68 SSQESVEKTFKQIQKDFGKIDILIANAGITVHKP-ALDYTYEQWNKVIDVNLNGV 121
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 40.5 bits (96), Expect = 0.003
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
QG T L+TG + +G + L +++ + ++ +L+ +A +
Sbjct: 4 QGKTALVTGASRGIGRAIALRLA-ADGAKVVIYDSNEEAAEALA-AELRAAGGEARVLVF 61
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISG 325
DVSD+ + + I + + G +D +++ AGI+
Sbjct: 62 DVSDEAAVRALIEAAVEAFGALDILVNNAGITR 94
|
Length = 246 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.003
Identities = 30/148 (20%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 240 LITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLK 299
L+TGGTG +G L+ + ++L R + S+ +++ + D++D
Sbjct: 2 LVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRF-------HEGDLTDP-- 52
Query: 300 MISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTI-ALNYALEN 358
+ ++ + P D V+H+A SG+ ++ + + + + GT+ L A
Sbjct: 53 --DALERLLAEVQP-DAVIHLAAQSGVGASFEDPAD-----FIRANVLGTLRLLEAARRA 104
Query: 359 TILKLQKNKLDFVCYFSSSSAILGDFGS 386
+ + F+SSS + GD
Sbjct: 105 GVKRF---------VFASSSEVYGDVAD 123
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|223314 COG0236, AcpP, Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 0.004
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 505 IENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSY 563
IE +K+ I L + EI + D G DS+ L E L + + ++I +
Sbjct: 6 IEERVKDIIAEQLGVDEEEITTEASFVEDLGLDSLDLVELVMALEEEFGIEIPDEELENI 65
Query: 564 STLERLITYFIKNHN 578
T+ L+ Y +
Sbjct: 66 KTVGDLVDYIEELLA 80
|
Length = 80 |
| >gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.004
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 24/91 (26%)
Query: 787 PVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKC 846
P +N CSSSL T +A +++ E D ISAGV +S + S + PD K
Sbjct: 82 PGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVE-TVS--RFAKGNSDSL--PDTKN 136
Query: 847 YVFDE-------------------RANGLVP 858
+F E R +GL+P
Sbjct: 137 PLFAEAQARTAARAEGGAEAWHDPREDGLLP 167
|
Length = 406 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1152 | |||
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| KOG1202|consensus | 2376 | 100.0 | ||
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| KOG1394|consensus | 440 | 100.0 | ||
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 100.0 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.96 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.96 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.96 | |
| KOG1202|consensus | 2376 | 99.96 | ||
| KOG1201|consensus | 300 | 99.94 | ||
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 99.94 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.94 | |
| KOG1200|consensus | 256 | 99.94 | ||
| KOG1205|consensus | 282 | 99.94 | ||
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.94 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.91 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.91 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.9 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.89 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.89 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.89 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.89 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.89 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.89 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.89 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.88 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.88 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.88 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.88 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.88 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.88 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.88 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.88 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.88 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.87 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.87 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.87 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.87 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.87 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.87 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.87 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.87 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.87 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.87 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.87 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.86 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.86 | |
| KOG4169|consensus | 261 | 99.86 | ||
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.86 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.86 | |
| KOG0725|consensus | 270 | 99.86 | ||
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.86 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.86 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.86 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.86 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.86 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.86 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.86 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.86 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.86 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.86 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.86 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.86 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.86 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.85 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.85 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.85 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.85 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.85 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.85 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.85 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.85 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.85 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.85 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.85 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.84 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.84 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.84 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.84 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.84 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.84 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.84 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.84 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.84 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.84 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.84 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.83 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.83 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.83 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.83 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.83 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.83 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.83 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.83 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.83 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.83 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.83 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.83 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.83 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.82 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.82 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.82 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.82 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.82 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.82 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.81 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.81 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| KOG1210|consensus | 331 | 99.8 | ||
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.8 | |
| KOG1610|consensus | 322 | 99.8 | ||
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.8 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.8 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.8 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.79 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.79 | |
| KOG1199|consensus | 260 | 99.79 | ||
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.79 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.79 | |
| KOG1611|consensus | 249 | 99.78 | ||
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.78 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.78 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.78 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.78 | |
| KOG1207|consensus | 245 | 99.78 | ||
| KOG1208|consensus | 314 | 99.78 | ||
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.78 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.77 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.77 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.77 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.77 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.77 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.77 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.76 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.76 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.76 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.76 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.75 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.75 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.75 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.75 | |
| KOG1209|consensus | 289 | 99.75 | ||
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.74 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.74 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.73 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.73 | |
| KOG1014|consensus | 312 | 99.73 | ||
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.72 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.72 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.71 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.71 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.7 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.7 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.7 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.7 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.69 | |
| PRK06158 | 384 | thiolase; Provisional | 99.69 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.69 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.69 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.69 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.69 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.68 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.68 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.68 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.67 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.67 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.66 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.66 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.66 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.66 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.66 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.66 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.64 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.61 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.61 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.61 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.6 | |
| KOG1204|consensus | 253 | 99.59 | ||
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.57 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.55 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.55 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.54 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.53 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.53 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.51 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.5 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.47 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.46 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.44 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.41 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.39 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.38 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.37 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.37 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.36 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.35 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.35 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.35 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.33 | |
| KOG1478|consensus | 341 | 99.33 | ||
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.33 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.32 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.27 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.25 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.24 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.23 | |
| PF00550 | 67 | PP-binding: Phosphopantetheine attachment site; In | 99.22 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.22 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.21 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.18 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.18 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.17 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.17 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.15 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.14 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.14 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.14 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.14 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.13 | |
| KOG1502|consensus | 327 | 99.12 | ||
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.1 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.09 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.08 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.05 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.02 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.02 | |
| KOG1406|consensus | 408 | 99.0 | ||
| PLN02686 | 367 | cinnamoyl-CoA reductase | 98.99 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 98.98 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 98.95 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 98.95 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 98.93 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 98.92 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 98.91 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 98.9 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 98.87 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 98.86 | |
| PRK00982 | 78 | acpP acyl carrier protein; Provisional | 98.86 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 98.85 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 98.83 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 98.81 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 98.81 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 98.77 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 98.75 | |
| KOG1390|consensus | 396 | 98.74 | ||
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 98.73 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 98.73 | |
| CHL00124 | 82 | acpP acyl carrier protein; Validated | 98.71 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 98.7 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 98.69 | |
| PRK05883 | 91 | acyl carrier protein; Validated | 98.69 | |
| KOG1371|consensus | 343 | 98.67 | ||
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 98.66 | |
| PRK12449 | 80 | acyl carrier protein; Provisional | 98.64 | |
| PRK05350 | 82 | acyl carrier protein; Provisional | 98.62 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.62 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 98.61 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 98.58 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 98.58 | |
| PRK09184 | 89 | acyl carrier protein; Provisional | 98.58 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 98.58 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 98.58 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 98.56 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 98.55 | |
| PRK06060 | 705 | acyl-CoA synthetase; Validated | 98.54 | |
| TIGR00517 | 77 | acyl_carrier acyl carrier protein. S (Ser) at posi | 98.53 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 98.53 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 98.53 | |
| KOG1389|consensus | 435 | 98.52 | ||
| PLN03173 | 391 | chalcone synthase; Provisional | 98.52 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 98.5 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 98.48 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 98.47 | |
| smart00823 | 86 | PKS_PP Phosphopantetheine attachment site. Phospho | 98.46 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 98.46 | |
| PRK07081 | 83 | acyl carrier protein; Provisional | 98.45 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 98.45 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 98.44 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 98.43 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 98.43 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 98.41 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 98.4 | |
| PRK07117 | 79 | acyl carrier protein; Validated | 98.39 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 98.37 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.36 | |
| PRK05828 | 84 | acyl carrier protein; Validated | 98.33 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.3 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 98.3 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 98.28 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 98.28 | |
| PRK08172 | 82 | putative acyl carrier protein IacP; Validated | 98.28 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 98.23 | |
| COG0236 | 80 | AcpP Acyl carrier protein [Lipid metabolism / Seco | 98.23 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.22 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.21 | |
| KOG1430|consensus | 361 | 98.2 | ||
| PRK07639 | 86 | acyl carrier protein; Provisional | 98.18 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 98.18 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 98.15 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 98.13 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 98.11 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.09 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 98.06 | |
| PTZ00171 | 148 | acyl carrier protein; Provisional | 98.01 | |
| KOG1391|consensus | 396 | 97.99 | ||
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 97.95 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 97.94 | |
| PRK05087 | 78 | D-alanine--poly(phosphoribitol) ligase subunit 2; | 97.93 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 97.92 | |
| COG3433 | 74 | Aryl carrier domain [Secondary metabolites biosynt | 97.87 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 97.87 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 97.87 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 97.78 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 97.76 | |
| KOG1392|consensus | 465 | 97.76 | ||
| PRK05691 | 4334 | peptide synthase; Validated | 97.76 | |
| PRK06508 | 93 | acyl carrier protein; Provisional | 97.74 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 97.72 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 97.71 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 97.7 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.69 | |
| PRK05691 | 4334 | peptide synthase; Validated | 97.66 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 97.66 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 97.64 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 97.63 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 97.57 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 97.57 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.55 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 97.54 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 97.53 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 97.46 | |
| TIGR01688 | 73 | dltC D-alanine--poly(phosphoribitol) ligase, subun | 97.36 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 97.36 | |
| KOG4022|consensus | 236 | 97.32 | ||
| KOG1221|consensus | 467 | 97.3 | ||
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 97.3 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 97.27 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.23 | |
| KOG1748|consensus | 131 | 97.22 | ||
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 97.22 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.22 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 97.17 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 96.38 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 96.25 | |
| KOG0747|consensus | 331 | 96.21 | ||
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 96.13 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 96.12 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 96.11 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 96.03 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 95.93 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 95.79 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 95.75 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 95.74 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 95.73 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 95.7 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 95.48 | |
| KOG2865|consensus | 391 | 95.42 | ||
| KOG1431|consensus | 315 | 95.37 | ||
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 95.36 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 95.33 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 94.88 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.88 | |
| KOG1372|consensus | 376 | 94.86 | ||
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 94.84 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.76 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 94.68 | |
| PLN00106 | 323 | malate dehydrogenase | 94.58 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 94.58 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.52 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 94.48 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 94.4 | |
| KOG2774|consensus | 366 | 94.23 | ||
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 94.22 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 94.22 | |
| KOG1203|consensus | 411 | 94.2 | ||
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 94.19 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 94.18 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 94.12 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 94.08 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 94.07 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.06 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 94.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.0 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 93.98 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 93.98 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 93.97 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 93.96 |
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-118 Score=1143.45 Aligned_cols=504 Identities=41% Similarity=0.667 Sum_probs=477.8
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++||||||+|||||++|+++||++|.+|+++|+++|++|||++.+|++++...++.+++||||+++++.||+.||||||+
T Consensus 4 ~~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPr 83 (1061)
T COG3321 4 EPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPR 83 (1061)
T ss_pred CcEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHH
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhcc------ccccccccchhhHHHHHHHHHcCC
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDR------LDQVNLTSTHNAILSARLAYFMDL 784 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~------~~~~~~~~~~~~~~a~ris~~~~l 784 (1152)
||..||||||++||++|+|||||||++..+.+++||||+|.+..+|.... .+.+..+++..+++++||||+|||
T Consensus 84 EA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l 163 (1061)
T COG3321 84 EAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL 163 (1061)
T ss_pred HHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999988876554 245677888889999999999999
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEE
Q psy616 785 KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVA 864 (1152)
Q Consensus 785 ~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~ 864 (1152)
+||+++|||+|||||+|+|+||++|++||||+||+||||+.++|..++.|++.|+||++|+|++||+++|||++|||+|+
T Consensus 164 ~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~ 243 (1061)
T COG3321 164 SGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGV 243 (1061)
T ss_pred CCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHH
Q psy616 865 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINA 944 (1152)
Q Consensus 865 vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~a 944 (1152)
|+|||+++|++|||+|||||||+++|+||+++|+|+||+.+|++++++||++|||+|++|+|||+|||||++|||||+++
T Consensus 244 vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGDpiE~~a 323 (1061)
T COG3321 244 VVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEANA 323 (1061)
T ss_pred EEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecccccccccc
Q psy616 945 LHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTV 1024 (1152)
Q Consensus 945 l~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~ 1024 (1152)
|.++|+..+ +..+|.|||+|+||||+++|||++|+||++|+|+|++|||++||++|||+++|+.+||+++++.++|+..
T Consensus 324 L~~v~~~~~-~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~~~W~~~ 402 (1061)
T COG3321 324 LGAVYGEGA-PAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTG 402 (1061)
T ss_pred HHHHhccCC-CCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCCcCCCCC
Confidence 999999877 7789999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCccEEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEEEEeecCCHHHHHHHHHHHHHHHHhCCCC-CHHH
Q psy616 1025 NEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTV-CIEN 1103 (1152)
Q Consensus 1025 ~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~-~l~d 1103 (1152)
. .+|+|+||||||||||+|+||||+++... .. ....+++|+|||||+++|+.++.+|++|++.+... +|.|
T Consensus 403 ~-~prrAgvssfG~gGtNaHvIlEe~~~~~~------~~-~~~~p~~l~lSAk~~~~L~~~a~~l~~~l~~~~~~~~l~d 474 (1061)
T COG3321 403 G-GPRRAGVSSFGFGGTNAHVILEEAPPRAE------ST-IPSSPRLLVLSAKTAERLAATAPRLADRLELQGGLLSLAD 474 (1061)
T ss_pred C-CCceeeeeccCCCCCceEEEEeecCCccc------CC-CCCCCceeeeecCCHHHHHHHHHHHHHHHHhCcccchHHH
Confidence 4 68999999999999999999999976110 01 11223899999999999999999999999988776 9999
Q ss_pred HHHHHHhcCCCCCcEEEEEeCCHHHHHHHHHHhhcccccc
Q psy616 1104 FVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKEKI 1143 (1152)
Q Consensus 1104 ~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~~~~~ 1143 (1152)
+||||+.+|++|++|.++|++|.+|+.+.|+.+..++...
T Consensus 475 ia~Tl~~gR~~~~~R~~~va~~~eel~~~L~~~~~~~~~~ 514 (1061)
T COG3321 475 VAYTLQAGRPHFEHRLAVVANDREELEAGLRAFAAGKAKA 514 (1061)
T ss_pred HHHHHHhhhhhccceeEEEeCCHHHHHHHHHHHhcCCCCc
Confidence 9999999999999999999999999999999998766543
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-100 Score=1023.71 Aligned_cols=503 Identities=27% Similarity=0.463 Sum_probs=454.6
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
+++||||||||+||++.|+++||++|.+|+++|+++|.+||+.+.||+++....++.++++|||+++++ ||+.||+|+|
T Consensus 6 ~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~-FD~~~F~i~p 84 (2582)
T TIGR02813 6 DMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVD-FNPMEFGLPP 84 (2582)
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccC-CCHhhcCCCH
Confidence 578999999999999999999999999999999999999999999999988888899999999999986 9999999999
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhc------------------------------
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD------------------------------ 759 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~------------------------------ 759 (1152)
+|++.||||||++|+++|||||||||..+ +++.|||||+|++.+++...
T Consensus 85 ~ea~~mDpqqrl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (2582)
T TIGR02813 85 NILELTDISQLLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIK 163 (2582)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhh
Confidence 99999999999999999999999999754 78899999999875532100
Q ss_pred -------cccccccccchhhHHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHH
Q psy616 760 -------RLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYI 832 (1152)
Q Consensus 760 -------~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~ 832 (1152)
.+....++++..|++++||||+|||+||+++|||||||||+|||+||++|++|+||+|||||+|+.++|..+.
T Consensus 164 ~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~ 243 (2582)
T TIGR02813 164 KFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYM 243 (2582)
T ss_pred hhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHH
Confidence 0112245677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHH
Q psy616 833 AMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKS 912 (1152)
Q Consensus 833 ~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~ 912 (1152)
.|++.++||++|+|||||.++|||++|||+|+|||||+++|++|||+|||+|+|+++|+||++.++|+|++.+|.++|++
T Consensus 244 ~fs~~~~lS~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~ 323 (2582)
T TIGR02813 244 SFSKTPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKR 323 (2582)
T ss_pred HHHhccCcCCCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCc
Q psy616 913 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKII 992 (1152)
Q Consensus 913 al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~i 992 (1152)
||++||++|+||+|||+|||||++||++|++||.++|+......++|+|||+|+||||+++|||++++||++|+|+||+|
T Consensus 324 Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~i 403 (2582)
T TIGR02813 324 AYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVL 403 (2582)
T ss_pred HHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999998765555679999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCCCCeeecccccccccc-CCCccEEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEE
Q psy616 993 PASLHCEKENNYIILKNSPFYINKSNKKWNTV-NEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHM 1071 (1152)
Q Consensus 993 pp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~-~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l 1071 (1152)
||++||++|||.++++++||+++++.++|+.. .+.+|+++||||||||+|+|+|||+|++.... ..........++
T Consensus 404 Pp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~~~~~~---~~~~~~~~~~~~ 480 (2582)
T TIGR02813 404 PPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYSPKHQR---DDQYRQRAVAQT 480 (2582)
T ss_pred CCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeecCccccc---cccccccCCcce
Confidence 99999999999999999999999999999743 34679999999999999999999998643211 011111224578
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHhCC---CCCHHHHH--HHHHhcCCCCCcEEEEEeCCHHHHHHHHHHhhc
Q psy616 1072 VVLSAKTKISLKEKMKQILLFLRKNN---TVCIENFV--YTLMQGRHHFQYRCAIIISSIEEVVKIINDTLN 1138 (1152)
Q Consensus 1072 ~~lSa~~~~~l~~~~~~l~~~l~~~~---~~~l~d~a--~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~ 1138 (1152)
|+|||+|+++|...++++.++|.... ...+.+++ ||+..+ .++.||++|+++|.+||.++|+.+..
T Consensus 481 ~~lSA~~~~aL~~~l~~~~~~l~~~~~~~~~~~~~la~~~t~~~~-~~~~~R~a~va~~~~el~~~L~~a~~ 551 (2582)
T TIGR02813 481 LLFTAANEKALVSSLKDWKNKLSAKADDQPYAFNALAVENTLRTI-AVALARLGFVAKNADELITMLEQAIT 551 (2582)
T ss_pred eeecCCCHHHHHHHHHHHHHHHhcccccccccHHHHHHHhhhccc-ccCCceEEEEECCHHHHHHHHHHHHH
Confidence 99999999999999999999997543 24578887 555544 45679999999999999999987654
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-83 Score=750.05 Aligned_cols=434 Identities=36% Similarity=0.608 Sum_probs=389.6
Q ss_pred CCCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCC
Q psy616 629 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 708 (1152)
Q Consensus 629 ~~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 708 (1152)
..++|+|.||++++|-++|+++||++|++|.|.+++-| .||.. ++|+-+ +..|-+.++..||+.||+..
T Consensus 9 ~~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~-rrW~~-G~ygLP---------~r~gKlKdL~kFDa~ff~vh 77 (2376)
T KOG1202|consen 9 KQEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDP-RRWEA-GLYGLP---------KRSGKLKDLNKFDAGFFGVH 77 (2376)
T ss_pred cCCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCc-ccccc-cccCCc---------hhhcchhhhhhhcccccCcC
Confidence 36899999999999999999999999999999999866 46754 344322 22366778999999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh------ccccccccccchhhHHHHHHHHHc
Q psy616 709 PLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ------DRLDQVNLTSTHNAILSARLAYFM 782 (1152)
Q Consensus 709 ~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~------~~~~~~~~~~~~~~~~a~ris~~~ 782 (1152)
++++..||||.|++||++|||+-|||+.|.++++++||||+|.+..+... ....-+.+++..++|.+|||||.|
T Consensus 78 ~KQa~~MDPq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytF 157 (2376)
T KOG1202|consen 78 PKQANTMDPQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTF 157 (2376)
T ss_pred cccccccCHHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEE
Confidence 99999999999999999999999999999999999999999987654221 223456678899999999999999
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCccccccc
Q psy616 783 DLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 862 (1152)
Q Consensus 783 ~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~ 862 (1152)
||+|||+.+||+||||+.|+..|++.++.|+||.|||+|+|+++.|.....|-++|||||+|.||.||+.+|||+|+|||
T Consensus 158 DfqGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~ 237 (2376)
T KOG1202|consen 158 DFQGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGV 237 (2376)
T ss_pred eccCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcccchhhcCCCceEEEEEEEEEecCC-CCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy616 863 VAVVLKRLSRALSDGDPIHAIIRGSGINYDG-KTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941 (1152)
Q Consensus 863 ~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG-~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E 941 (1152)
++++|.|.+.|. |+||.|....+|.|| +..|+|-|+++.|+++|++.|+.+|++|+++-|||+|||||++|||-|
T Consensus 238 ~avllqrk~~Ar----RvYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGDpQE 313 (2376)
T KOG1202|consen 238 VAVLLQRKSLAR----RVYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGDPQE 313 (2376)
T ss_pred EEEEEehhHHHH----HHHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCChHH
Confidence 999999999995 699999999999999 567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCccc-ccCCCCeeecccccc
Q psy616 942 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI-ILKNSPFYINKSNKK 1020 (1152)
Q Consensus 942 ~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i-~~~~~~~~v~~~~~~ 1020 (1152)
+++|.++|+..+ ..++.|||+|||+||.|.|||+++|.|.+++|++|.|||++|+++|||.| .+-+..+.|.+++.|
T Consensus 314 aN~it~~fC~~R--t~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp 391 (2376)
T KOG1202|consen 314 ANGITRFFCATR--TTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLP 391 (2376)
T ss_pred hhhHHHHHhhcC--CCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCCC
Confidence 999999999854 56799999999999999999999999999999999999999999999999 578899999999999
Q ss_pred ccccCCCccEEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEEEEeecCCHHHHHHHHHHH
Q psy616 1021 WNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQI 1089 (1152)
Q Consensus 1021 w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l 1089 (1152)
|+. -+.++|||||||+|+|+||+..+...+ ..........++..|+||+++..+.++..
T Consensus 392 ~~G-----GivGiNSFGFGGsN~HviLks~~~~~P-----~~tP~~~~~~l~~~sgRT~eAVeqll~~~ 450 (2376)
T KOG1202|consen 392 WRG-----GIVGINSFGFGGSNAHVILKSNTKPKP-----APTPHAGLLRLVRASGRTPEAVEQLLEQA 450 (2376)
T ss_pred ccC-----ceeeeeccccCCCceeEEeccCCCCCC-----CCCCCCCcceeeecCCCCHHHHHHHHHHH
Confidence 974 367899999999999999997543221 11112224468888999999988877664
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-74 Score=677.51 Aligned_cols=392 Identities=22% Similarity=0.375 Sum_probs=348.5
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|||||||+++|.+.++++||++|++|+++|++++ +|+... ...+++|+++ .||+.+| ++++
T Consensus 4 ~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~--~~~~~~-----------~~~~~~g~i~---~~~~~~~-~~~~ 66 (414)
T PRK08722 4 RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIE--HFDTTN-----------FSTRFAGLVK---DFNCEEY-MSKK 66 (414)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecC--cccccc-----------CCCceeEEcC---CCChhHc-CCHH
Confidence 689999999999999999999999999999999875 454322 3456778876 4999888 9999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 777 (1152)
+++.|||++|+++.++++||+||||++......++|||+|++.+.+.. ..+++..+++...+.+++|
T Consensus 67 ~~~~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ 146 (414)
T PRK08722 67 DARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGN 146 (414)
T ss_pred HHhhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHH
Confidence 999999999999999999999999988777889999999998664311 1223455667788999999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-----CCCCcccCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDER 852 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls-----~~g~~~~Fd~~ 852 (1152)
||++|||+||+++|+++|+||+.||++|+++|++|+||+|||||++..++|..+..|..+++|| |++.|||||.+
T Consensus 147 is~~~gl~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~ 226 (414)
T PRK08722 147 LSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKD 226 (414)
T ss_pred HHHHhCCCCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999997 56799999999
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
+|||++|||++++|||++++|+++|++||++|+|+++++|+.+..-..|++.++.++|++||++|||+|+||+|||+|||
T Consensus 227 ~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgt 306 (414)
T PRK08722 227 RDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGT 306 (414)
T ss_pred CCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCc
Confidence 99999999999999999999999999999999999999998764333445666799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCe
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 1012 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 1012 (1152)
||+.+|++|.+||+++|+... .+.++|+|+|+++||+++|||+++++|++++|++++|||++|+++|+|.++++
T Consensus 307 gt~~~D~~E~~al~~~fg~~~--~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~---- 380 (414)
T PRK08722 307 STPAGDVAEIKGIKRALGEAG--SKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDID---- 380 (414)
T ss_pred cCCCCCHHHHHHHHHHhcccC--CCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc----
Confidence 999999999999999998642 23489999999999999999999999999999999999999999999988664
Q ss_pred eeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1013 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1013 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+++.+.++|. ..|++++|||||||+|+|+||++
T Consensus 381 ~v~~~~~~~~----~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 381 LVPHTARKVE----SMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred cCCCccccCC----CCCEEEEecccCCCceEEEEEec
Confidence 3445555543 35889999999999999999975
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-73 Score=679.59 Aligned_cols=392 Identities=26% Similarity=0.372 Sum_probs=344.7
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
.++|||||||+++|.+.++++||++|++|+++|++++ ||+...+ ..+++|.++ .||+..| +++
T Consensus 128 ~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~--~f~~~~~-----------~~~~ag~i~---~f~~~~~-l~~ 190 (540)
T PLN02787 128 QRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIE--RFDCSQF-----------PTRIAGEIK---SFSTDGW-VAP 190 (540)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccC--ccchhhC-----------Ccccccccc---ccChhhc-CCH
Confidence 3799999999999999999999999999999999886 5554322 234566654 4777665 899
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCCCCC---CCCCCceEEEEEeccCCchh------------ccccccccccchhhHH
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGYGPN---QIANQKIGMFVGVEEGSNYQ------------DRLDQVNLTSTHNAIL 774 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~~~~---~l~~~~~gv~~g~~~~~~~~------------~~~~~~~~~~~~~~~~ 774 (1152)
++++.|||+++++|.++++||+|||++++ .+++.++|||+|+..+.... ..+++..++....++.
T Consensus 191 k~~r~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~ 270 (540)
T PLN02787 191 KLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMG 270 (540)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHH
Confidence 99999999999999999999999999764 56788999999987654210 1123333444556778
Q ss_pred HHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-----CCCCcccC
Q psy616 775 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVF 849 (1152)
Q Consensus 775 a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls-----~~g~~~~F 849 (1152)
+++|++.|||+||+++|++||+||+.||++|+++|++|+||+|||||++..++|..+..|..+++|| |++.||||
T Consensus 271 a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPF 350 (540)
T PLN02787 271 SAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPW 350 (540)
T ss_pred HHHHHHHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCc
Confidence 8999999999999999999999999999999999999999999999999999999999999999998 56789999
Q ss_pred CCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy616 850 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 929 (1152)
Q Consensus 850 d~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~ 929 (1152)
|.++|||++|||++++|||++++|+++|++|||+|+|+++++||++...+.|++.++.++|++||++||++|+||+|||+
T Consensus 351 D~~rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyIna 430 (540)
T PLN02787 351 DMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINA 430 (540)
T ss_pred ccCCCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEc
Confidence 99999999999999999999999999999999999999999999877667778889999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCC
Q psy616 930 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 1009 (1152)
Q Consensus 930 hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~ 1009 (1152)
|||||++||.+|.+||.++|+.. ..++|+|+|+++||+++|||+++++|++++|++|+|||++|+++|+|.++++
T Consensus 431 HGTGT~~gD~~E~~Ai~~~Fg~~----~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~- 505 (540)
T PLN02787 431 HATSTKAGDLKEYQALMRCFGQN----PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTK- 505 (540)
T ss_pred cCccCCCCCHHHHHHHHHHhCCC----CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcc-
Confidence 99999999999999999999853 2479999999999999999999999999999999999999999999988653
Q ss_pred CCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1010 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1010 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+.+..+.++| +.|++++|||||||.|+|+||++|
T Consensus 506 --~~v~~~~~~~-----~ir~aL~nSfGFGG~Naslvl~~~ 539 (540)
T PLN02787 506 --VLVGPKKERL-----DIKVALSNSFGFGGHNSSILFAPY 539 (540)
T ss_pred --cccccccccC-----CcCEEEEeeecCCceeEEEEEEeC
Confidence 2233333333 368899999999999999999976
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-73 Score=666.24 Aligned_cols=389 Identities=24% Similarity=0.336 Sum_probs=343.8
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
.++|||||||+++|++.++++||++|.+|+++|+++|..+++. .....+++|++. +.||+. +++
T Consensus 11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~-----------~~~~~~~~g~i~--~~~d~~---~~~ 74 (418)
T PRK07910 11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEE-----------FDLPVRIGGHLL--EEFDHQ---LTR 74 (418)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhc-----------cCCCcceEEEec--cCcccc---CCH
Confidence 4789999999999999999999999999999999988644321 113356788883 468864 789
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCch------hc-------cccccccccchhhHHHH
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY------QD-------RLDQVNLTSTHNAILSA 776 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~------~~-------~~~~~~~~~~~~~~~a~ 776 (1152)
++++.|||++|+++.++|+||||||++ .+++.++|||+|++.+... .. .+++..+.....+.++.
T Consensus 75 ~~~~~~d~~~~~~l~aa~~AledAg~~--~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~ 152 (418)
T PRK07910 75 VELRRMSYLQRMSTVLGRRVWENAGSP--EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAA 152 (418)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHcCCC--CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHH
Confidence 999999999999999999999999985 3677899999998765421 10 11223344456677899
Q ss_pred HHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCC-CC-----CCCCcccCC
Q psy616 777 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGM-LS-----PDGKCYVFD 850 (1152)
Q Consensus 777 ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~-ls-----~~g~~~~Fd 850 (1152)
+++++|+++||+++++++||||++||++|+++|++|+||+|||||+|..++|..+..|.++|+ +| |++.|||||
T Consensus 153 ~is~~~~~~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd 232 (418)
T PRK07910 153 AVGLERHAKAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFD 232 (418)
T ss_pred HHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999 87 789999999
Q ss_pred CCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy616 851 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 930 (1152)
Q Consensus 851 ~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~h 930 (1152)
.++|||++|||++++|||++++|+++|++||++|+|+++++||++.+.+.|++.+|.++|++||+++|++|+||+|||+|
T Consensus 233 ~~~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~h 312 (418)
T PRK07910 233 KDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAH 312 (418)
T ss_pred CCCCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcC
Confidence 99999999999999999999999999999999999999999999888888999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCC
Q psy616 931 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 1010 (1152)
Q Consensus 931 gtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~ 1010 (1152)
||||++||++|.+||+++|+... ++|+|+|+++||+++|||+++++|++++|++++|||++|+++|||.++++.
T Consensus 313 gtgt~~~D~~E~~Al~~~fg~~~-----~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~- 386 (418)
T PRK07910 313 ATGTSVGDVAEGKAINNALGGHR-----PAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDV- 386 (418)
T ss_pred CcCCCCCCHHHHHHHHHHhCCCC-----CceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc-
Confidence 99999999999999999998532 468999999999999999999999999999999999999999999987653
Q ss_pred CeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1011 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+.. .+|+ .+.|++++|||||||+|+|+||+.+
T Consensus 387 ---~~~--~~~~---~~~~~al~nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 387 ---VAG--EPRP---GNYRYAINNSFGFGGHNVALAFGRY 418 (418)
T ss_pred ---CCC--CCcC---CCccEEEEeeecCCCeeEEEEEecC
Confidence 222 2343 3578999999999999999999864
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-72 Score=669.32 Aligned_cols=395 Identities=23% Similarity=0.380 Sum_probs=352.3
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCC-----CCCCCcCC
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGI-----DEFDPLFF 705 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~FD~~~f 705 (1152)
++||||||||++|.+.++++||++|.+|++.++++|..||. ....+++|++++. +.||+.+|
T Consensus 4 ~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~-------------~~~~~~~g~i~~~~~~~~~~fd~~~~ 70 (424)
T PRK06333 4 KRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVG-------------DLATKIGGQVPDLAEDAEAGFDPDRY 70 (424)
T ss_pred CCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCccccc-------------CCCCceEEEeccccccccccCChhHc
Confidence 68999999999999999999999999999999999976653 1234577888763 34999998
Q ss_pred CCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCC-CCCceEEEEEeccCCchh-------------ccccccccccchh
Q psy616 706 EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI-ANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHN 771 (1152)
Q Consensus 706 ~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l-~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~ 771 (1152)
+++++++.|||+++++++++++||+||||.++.+ ...++|||+|++.+.+.. ..+.+..++....
T Consensus 71 -i~~~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (424)
T PRK06333 71 -LDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLT 149 (424)
T ss_pred -CCHHHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhh
Confidence 9999999999999999999999999999998887 678999999987654311 0122344556667
Q ss_pred hHHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC------CCC
Q psy616 772 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP------DGK 845 (1152)
Q Consensus 772 ~~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~------~g~ 845 (1152)
+.+++|||+.|||+||+++|+++|+||+.||++|+++|++|+||+|||||++..++|..+..|..++.++. ++.
T Consensus 150 ~~~a~~is~~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~ 229 (424)
T PRK06333 150 NMAAGHVSIRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQA 229 (424)
T ss_pred hHHHHHHHHHhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcC
Confidence 88999999999999999999999999999999999999999999999999999999998888999998873 578
Q ss_pred cccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy616 846 CYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDIN 925 (1152)
Q Consensus 846 ~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~ 925 (1152)
|||||.++|||++|||++++|||++++|+++|++||++|+|++.++|+.+.....|++.+++++|++||++||++|+||+
T Consensus 230 ~~Pfd~~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId 309 (424)
T PRK06333 230 SRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQ 309 (424)
T ss_pred CCCCCCCCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999999999999999999999999987555567888999999999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCccc
Q psy616 926 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI 1005 (1152)
Q Consensus 926 yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i 1005 (1152)
|||+|||||+++|++|+.+|.++|+. ..+++|+|+|+++||+++|||++++++++++|++|+|||++|+++|+|.+
T Consensus 310 ~i~~hgtgt~~~D~~E~~al~~~fg~----~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~ 385 (424)
T PRK06333 310 HLNAHATSTPVGDLGEVAAIKKVFGH----VSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAA 385 (424)
T ss_pred EEeccCCCCccchHHHHHHHHHHhCC----CCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCc
Confidence 99999999999999999999999983 23589999999999999999999999999999999999999999999987
Q ss_pred ccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1006 ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1006 ~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
+.. . ++.++.++|+ .|++++|||||||+|+|+||++|.
T Consensus 386 ~~~--~-~~~~~~~~~~-----~~~al~~s~gfGG~n~~~il~~~~ 423 (424)
T PRK06333 386 EGL--D-VVANKARPMD-----MDYALSNGFGFGGVNASILFRRWE 423 (424)
T ss_pred ccc--c-cccCCCcccC-----cCEEEEeeecCCCeeEEEEEeccC
Confidence 621 1 4567778885 478999999999999999999863
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-71 Score=651.64 Aligned_cols=382 Identities=21% Similarity=0.312 Sum_probs=337.7
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|||||||+++|++.++++||++|.+|+++|++++ ||+...+ .++++|.++ .||+.+ .++++
T Consensus 1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~--~~~~~~~-----------~~~~~g~i~---~~~~~~-~~~~~ 63 (399)
T cd00832 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPIT--RFDPSGY-----------PARLAGEVP---DFDAAE-HLPGR 63 (399)
T ss_pred CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCC--ccccccC-----------CCceeEEeC---CcChhh-cCCHH
Confidence 479999999999999999999999999999999874 5654332 234566665 488776 59999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 777 (1152)
+.+.|||++|+++.++++||+||||.++.+++.|+|||+|++.+.+.. ..+.+...+....+.++++
T Consensus 64 ~~~~~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (399)
T cd00832 64 LLPQTDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQ 143 (399)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHH
Confidence 999999999999999999999999998888899999999987765321 1122233445556788999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC----CCCcccCCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP----DGKCYVFDERA 853 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~----~g~~~~Fd~~a 853 (1152)
||++||++||+++|+++|+||+.||++|+++|++|+ |++||||++..++|..+..|..+++||. ++.|||||.++
T Consensus 144 is~~~gl~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~ 222 (399)
T cd00832 144 ISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA 222 (399)
T ss_pred HHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC
Confidence 999999999999999999999999999999999999 9999999999999999999999999984 35899999999
Q ss_pred CCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy616 854 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTG 933 (1152)
Q Consensus 854 ~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtg 933 (1152)
|||++|||++++|||++++|+++|++|||+|+|+++++||.+.. +++.+|.++|++||+++|++|+||+||++||||
T Consensus 223 ~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtg 299 (399)
T cd00832 223 AGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVFADAAG 299 (399)
T ss_pred CCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCc
Confidence 99999999999999999999999999999999999999998643 468999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCee
Q psy616 934 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 1013 (1152)
Q Consensus 934 T~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~ 1013 (1152)
|+.+|++|.++|+++|+.. .++|+|+|+++||+++|||+++++|++++|++++|||++|+++|+|.++++ +
T Consensus 300 t~~~D~~E~~al~~~fg~~-----~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~----~ 370 (399)
T cd00832 300 VPELDRAEAAALAAVFGPR-----GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLD----L 370 (399)
T ss_pred CCCCCHHHHHHHHHHhCCC-----CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcc----c
Confidence 9999999999999999853 368999999999999999999999999999999999999999999987654 2
Q ss_pred eccccccccccCCCccEEEEcCcCCCcceEEEEE
Q psy616 1014 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 1047 (1152)
Q Consensus 1014 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il 1047 (1152)
+..+.+++ +.|++++|||||||+|+|+||
T Consensus 371 v~~~~~~~-----~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 371 VTGRPRPA-----ALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CCCcccCC-----CCCEEEEeccCCCCcceEEEC
Confidence 33333222 468999999999999999986
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-71 Score=658.00 Aligned_cols=409 Identities=23% Similarity=0.315 Sum_probs=353.3
Q ss_pred CCCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccC-CcCCCCCccceeeeecC---CCCCCCCcC
Q psy616 629 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYEN-PIKSSNKINSKWYGSIP---GIDEFDPLF 704 (1152)
Q Consensus 629 ~~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~-~~~~~~~~~~~~~g~~~---~~~~FD~~~ 704 (1152)
..++||||||||++|++.++|+||++|++|+++|+++|..||++..++.. .+......+++++|+++ +++.||+.+
T Consensus 4 ~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~ 83 (437)
T PLN02836 4 PTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEEL 83 (437)
T ss_pred CCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChHH
Confidence 35689999999999999999999999999999999999999987765532 22223456778888874 456799999
Q ss_pred CCCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCC-CCCCceEEEEEeccCCchh-------------ccccccccccch
Q psy616 705 FEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQ-IANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTH 770 (1152)
Q Consensus 705 f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~-l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~ 770 (1152)
|..+ +.||+..+++++++++||+||||.+.. ....++|||+|++.+.... ..+.++.++...
T Consensus 84 ~~~~----~~~~~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 159 (437)
T PLN02836 84 WLNS----RSSSRFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRIL 159 (437)
T ss_pred hccc----cccCHHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhc
Confidence 8663 479999999999999999999997654 4678999999987554211 123344556677
Q ss_pred hhHHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC------CCC
Q psy616 771 NAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDG 844 (1152)
Q Consensus 771 ~~~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls------~~g 844 (1152)
.+++++|||++||++||+++|+++|+||+.||+.|+++|++|+||++||||++..++|..+..|..+++++ |++
T Consensus 160 ~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~ 239 (437)
T PLN02836 160 INMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTE 239 (437)
T ss_pred ccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCccc
Confidence 88999999999999999999999999999999999999999999999999999989999999999888876 567
Q ss_pred CcccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy616 845 KCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 924 (1152)
Q Consensus 845 ~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI 924 (1152)
.|||||.++|||++|||++++|||++++|+++|++||++|+|+++++||.+.....|++.++.++|++||++|||+|+||
T Consensus 240 ~~~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dI 319 (437)
T PLN02836 240 ASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQV 319 (437)
T ss_pred ccCCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHc
Confidence 89999999999999999999999999999999999999999999999987543333456677899999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcc
Q psy616 925 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 1004 (1152)
Q Consensus 925 ~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~ 1004 (1152)
+|||+|||||++||++|.+|+.++|+.... .+.++|+|+|+++||+++|||+++++|++|+|++++|||++|+++|+|.
T Consensus 320 d~ve~hgtgt~~~D~~E~~ai~~~~~~~~~-~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~ 398 (437)
T PLN02836 320 DYVNAHATSTPLGDAVEARAIKTVFSEHAT-SGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPI 398 (437)
T ss_pred CEEEccCCcCcCcCHHHHHHHHHHhccccc-CCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCC
Confidence 999999999999999999999999986542 3458999999999999999999999999999999999999999999998
Q ss_pred cccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1005 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1005 i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
++++..+.. +++ ..+.|++++|||||||+|+|+||++.
T Consensus 399 ~~~~~~~~~------~~~--~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 399 FDDGFVPLT------ASK--AMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred CCcccCccc------CCC--CCCccEEEEecccCCCeeEEEEEecC
Confidence 876544321 111 12568999999999999999999864
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-70 Score=645.48 Aligned_cols=391 Identities=28% Similarity=0.420 Sum_probs=345.7
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|+||||+|++|++.++++||++|.+|+++++++|. |+.. .....++|.++ .||+.+| ++++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~--~~~~-----------~~~~~~~g~i~---~f~~~~~-~~~~ 64 (411)
T PRK07314 2 RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITH--FDTS-----------DLAVKIAGEVK---DFNPDDY-MSRK 64 (411)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCc--cccc-----------CCCccEEEEeC---CcChhhc-CCHH
Confidence 5799999999999999999999999999999999873 4322 12346778776 4999888 9999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 777 (1152)
+++.|||+++++++++++||+||||+++++++.++|||+|++.+.... ....+..+++...+.++++
T Consensus 65 ~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 144 (411)
T PRK07314 65 EARRMDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGH 144 (411)
T ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHH
Confidence 999999999999999999999999999999999999999987654211 1122344556677889999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-----CCCCcccCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDER 852 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls-----~~g~~~~Fd~~ 852 (1152)
||+.||++||+++|+++|+||+.||+.|+++|++|+||++||||++..++|..+..|..+++++ |++.|+|||.+
T Consensus 145 is~~~gl~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~ 224 (411)
T PRK07314 145 VSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKD 224 (411)
T ss_pred HHHHhCCCCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999989999998887 46889999999
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
+||+++|||++++||+++++|.++|++||++|+|++.++|+.+.....|.+.++.++|++||++||++|+||+|||+|||
T Consensus 225 ~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgt 304 (411)
T PRK07314 225 RDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGT 304 (411)
T ss_pred CCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEcccc
Confidence 99999999999999999999999999999999999999999875555566788999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCe
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 1012 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 1012 (1152)
||+.+|++|.++|.++|+... ..++|+|+|+++||+++|||++++||++++|+|++|||++|+++|+|.++++..
T Consensus 305 gt~~~d~~E~~al~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~-- 379 (411)
T PRK07314 305 STPAGDKAETQAIKRVFGEHA---YKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYV-- 379 (411)
T ss_pred CCccccHHHHHHHHHHhcccC---CCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccc--
Confidence 999999999999999998532 348999999999999999999999999999999999999999999998765422
Q ss_pred eeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1013 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1013 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+.+. ...+.|+++||||||||+|+|+||++|
T Consensus 380 --~~~~-----~~~~~~~al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 380 --PNEA-----RERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred --CCcc-----cCCCCCEEEEecccCCCceEEEEEecC
Confidence 1221 223578999999999999999999976
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-69 Score=631.27 Aligned_cols=383 Identities=26% Similarity=0.359 Sum_probs=332.6
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|+|+|||+.+|.+.++++||++|++|+++|++++. |+. ....++++|.++ ||+..+ ++++
T Consensus 2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~--~~~-----------~~~~~~~~g~~~----~~~~~~-~~~~ 63 (406)
T PRK07967 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPE--FAE-----------MGMRSQVWGNVK----LDPTGL-IDRK 63 (406)
T ss_pred CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCc--ccc-----------cCCCCceEEEcC----CChhhc-CCHH
Confidence 5799999999999999999999999999999998763 221 123445667652 777655 7788
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh--------------ccccccccccchhhHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ--------------DRLDQVNLTSTHNAILSA 776 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~a~ 776 (1152)
..+.||+..++.+.++.+||+||||.++++.+.++|||+|+..+.... ....++.++....+++++
T Consensus 64 ~~~~~~r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~ 143 (406)
T PRK07967 64 VMRFMGDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSA 143 (406)
T ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHH
Confidence 899999999999999999999999998888889999999987554211 112344556677788999
Q ss_pred HHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC------CCCCcccCC
Q psy616 777 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFD 850 (1152)
Q Consensus 777 ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls------~~g~~~~Fd 850 (1152)
+||+.||++||+++|+++|+||+.||+.|+++|++|+||+|||||++. +++.....|..+++|| |++.|||||
T Consensus 144 ~is~~~~l~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd 222 (406)
T PRK07967 144 CLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYD 222 (406)
T ss_pred HHHHHHCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCCcCCc
Confidence 999999999999999999999999999999999999999999999997 5566667799999887 567999999
Q ss_pred CCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy616 851 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 930 (1152)
Q Consensus 851 ~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~h 930 (1152)
.++|||++|||++++|||++++|+++|++|||+|+|+++++||++ +++|++.+|.++|++||+.++ + ||+|||+|
T Consensus 223 ~~r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~--~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~aH 297 (406)
T PRK07967 223 ANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYD--MVAPSGEGAVRCMQMALATVD--T-PIDYINTH 297 (406)
T ss_pred CCCCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCC--CCCCCHHHHHHHHHHHHhCCC--C-CccEEEcC
Confidence 999999999999999999999999999999999999999999985 689999999999999998654 5 99999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCC
Q psy616 931 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 1010 (1152)
Q Consensus 931 gtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~ 1010 (1152)
||||+++|++|.+||+++|+.. .++|+|+|+++||+++|||++++++++++|++++|||++|+++++|.+. +
T Consensus 298 gtGT~~~D~~E~~Ai~~~fg~~-----~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~--~- 369 (406)
T PRK07967 298 GTSTPVGDVKELGAIREVFGDK-----SPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAA--G- 369 (406)
T ss_pred CCCCCCCCHHHHHHHHHHhCCC-----CCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCcccc--C-
Confidence 9999999999999999999752 2689999999999999999999999999999999999999999998752 1
Q ss_pred CeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1011 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+.+..+..+| .++|++++|||||||+|+|+||+++
T Consensus 370 -~~~~~~~~~~----~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 370 -MPIVTETTDN----AELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred -CCccCCCCcC----CCCCEEEEecccCCCeeEEEEEEec
Confidence 2223333333 2468899999999999999999986
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-69 Score=631.98 Aligned_cols=387 Identities=25% Similarity=0.354 Sum_probs=344.3
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|+|+|||+++|.+.++++||++|.+|+++|++++ ||+... ..+.++|.++ .||+.+| ++++
T Consensus 2 ~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~--~~~~~~-----------~~~~~~g~i~---~f~~~~~-~~~~ 64 (406)
T PRK08439 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKIT--LFDASD-----------FPVQIAGEIT---DFDPTEV-MDPK 64 (406)
T ss_pred CCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCC--CccccC-----------CCCceeEEcC---CcChhhc-CCHH
Confidence 579999999999999999999999999999999875 343221 2345667654 4999888 8999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCch-------------hccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~r 777 (1152)
+++.|||+++++++++++||+|||+.+++++..++||++|...+... ...+++..++....++++++
T Consensus 65 ~~~~~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 144 (406)
T PRK08439 65 EVKKADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGF 144 (406)
T ss_pred HHhhcCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHH
Confidence 99999999999999999999999999989999999999998654321 11234445666778899999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-----CCCCcccCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDER 852 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls-----~~g~~~~Fd~~ 852 (1152)
|++.||++||+++++++|+|++.||++|+++|++|+||++||||++..++|..+..|..++.|| |++.|||||.+
T Consensus 145 is~~~gl~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~ 224 (406)
T PRK08439 145 ISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKD 224 (406)
T ss_pred HHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998 56789999999
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
+|||++|||++++|||++++|+++|++||++|+|++.++|+++ +++|++.++.++|++||+++|+ +||+|||+|||
T Consensus 225 ~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~--~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~hgt 300 (406)
T PRK08439 225 RDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANH--ITSPAPEGPLRAMKAALEMAGN--PKIDYINAHGT 300 (406)
T ss_pred CCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCC--CCCCCHHHHHHHHHHHHHHcCC--CccCEEEccCC
Confidence 9999999999999999999999999999999999999998864 7889999999999999999999 89999999999
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCe
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 1012 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 1012 (1152)
||+.+|++|.+||.++|+... ..++|+|+|+++||+.+|||++++++++++|++++|||++|+++++|.++++.
T Consensus 301 gt~~~D~~E~~al~~~f~~~~---~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~--- 374 (406)
T PRK08439 301 STPYNDKNETAALKELFGSKE---KVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDY--- 374 (406)
T ss_pred cCCCCCHHHHHHHHHHhcccC---CCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCccc---
Confidence 999999999999999998642 33689999999999999999999999999999999999999999999886552
Q ss_pred eeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1013 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1013 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
++.+.+++ +.|.+++|||||||+|+|+||++|
T Consensus 375 -~~~~~~~~-----~~~~~l~nsfgfGG~n~~lvl~~~ 406 (406)
T PRK08439 375 -IPNVARKA-----ELNVVMSNSFGFGGTNGVVIFKKV 406 (406)
T ss_pred -CCCccccC-----CCCEEEEeeecCCCceEEEEEecC
Confidence 33344433 468899999999999999999864
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-69 Score=640.76 Aligned_cols=415 Identities=48% Similarity=0.805 Sum_probs=381.5
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++||||||||++|++.++++||++|.+|+++++++|..||+...++ +..........+++|++++++.||+.+|+|+++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~ 79 (421)
T cd00833 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYY-PDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPR 79 (421)
T ss_pred CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccc-cccccCCCcceecceecCCcccCCHhHcCCCHH
Confidence 4799999999999999999999999999999999999999877666 333334556778899999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhc------cccccccccchhhHHHHHHHHHcCC
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD------RLDQVNLTSTHNAILSARLAYFMDL 784 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~------~~~~~~~~~~~~~~~a~ris~~~~l 784 (1152)
+++.|||+++++++++++||+|||+.+++++..++|||+|+..++|... .+++....+...+..++++++.||+
T Consensus 80 ~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl 159 (421)
T cd00833 80 EAEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL 159 (421)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC
Confidence 9999999999999999999999999999889999999999877654321 1344455666678899999999999
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEE
Q psy616 785 KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVA 864 (1152)
Q Consensus 785 ~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~ 864 (1152)
+||+++|+++|+|++.||+.|+++|++|+||++||||++...++..+..|..++++++++.|+|||.+++|+++|||+++
T Consensus 160 ~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaa 239 (421)
T cd00833 160 RGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGV 239 (421)
T ss_pred CCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEE
Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred EEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHH
Q psy616 865 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINA 944 (1152)
Q Consensus 865 vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~a 944 (1152)
+||+++++|.++|++||++|+|++.++|+++...+.|+..++.++|++||++||++|+||+|||+|||||+.+|..|.++
T Consensus 240 lvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~a 319 (421)
T cd00833 240 VVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEA 319 (421)
T ss_pred EEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999887788999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecccccccccc
Q psy616 945 LHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTV 1024 (1152)
Q Consensus 945 l~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~ 1024 (1152)
|.++|+.......+++|+|+|+++||+.+|||++++++++++|+++.+||++|+++++|.++++..+++++++.++|+..
T Consensus 320 l~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (421)
T cd00833 320 LAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAP 399 (421)
T ss_pred HHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccCCeEeeCCCccCCCC
Confidence 99999865323455899999999999999999999999999999999999999999999999999999999999999743
Q ss_pred CCCccEEEEcCcCCCcceEEEEE
Q psy616 1025 NEKLRIGAVSAFGMSGTNAHIVL 1047 (1152)
Q Consensus 1025 ~~~~r~a~v~sfG~gG~nah~il 1047 (1152)
. .+|++++|||||||.|+|+||
T Consensus 400 ~-~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 400 A-GPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred C-CCeEEEEeCcCCCCceeEEeC
Confidence 2 578999999999999999986
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-68 Score=638.76 Aligned_cols=417 Identities=45% Similarity=0.788 Sum_probs=382.9
Q ss_pred EEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccc-cCCcCCCCCccceeeeecCCCCCCCCcCCCCCHHH
Q psy616 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYY-ENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLE 711 (1152)
Q Consensus 633 IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~e 711 (1152)
|+||||++++|++.++++||++|.+|+++++++|.+||+...++ ++.....++..++++|++++++.||+.+|++++++
T Consensus 1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~ 80 (424)
T smart00825 1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE 80 (424)
T ss_pred CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence 79999999999999999999999999999999999999866543 33444445567788999998888999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhc------cccccccccchhhHHHHHHHHHcCCC
Q psy616 712 AERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD------RLDQVNLTSTHNAILSARLAYFMDLK 785 (1152)
Q Consensus 712 a~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~------~~~~~~~~~~~~~~~a~ris~~~~l~ 785 (1152)
.+.|||+++++++++.+||+|||++++++++.++|||+|+..++|... .+.+..+.+...+..+++|++.||++
T Consensus 81 ~~~~~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~ 160 (424)
T smart00825 81 AEAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR 160 (424)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999876654321 12334445566778999999999999
Q ss_pred CCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEE
Q psy616 786 GPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAV 865 (1152)
Q Consensus 786 GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~v 865 (1152)
||+++|+++|+|++.||++|+++|++|+||.+||||++..+++.....|...+++++++.|+|||.+++||++|||++++
T Consensus 161 g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (424)
T smart00825 161 GPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVV 240 (424)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEE
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred EEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHH
Q psy616 866 VLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINAL 945 (1152)
Q Consensus 866 vLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al 945 (1152)
||++.++|.++|++||++|+|++.++|+++.+++.|+...+.++|++||++||++|+||+||++|||||+.+|..|.++|
T Consensus 241 VLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al 320 (424)
T smart00825 241 VLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEAL 320 (424)
T ss_pred EEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999998888899999999999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccC
Q psy616 946 HDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVN 1025 (1152)
Q Consensus 946 ~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~ 1025 (1152)
.++|+.......+++|+|+|+++||+.+|||++++++++++|++++|||++|+++|+|.+++...+|+++++.++|+. .
T Consensus 321 ~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 399 (424)
T smart00825 321 AAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVPTEATPWPA-T 399 (424)
T ss_pred HHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEccCCCcCCCC-C
Confidence 999986554445689999999999999999999999999999999999999999999999999999999999999973 3
Q ss_pred CCccEEEEcCcCCCcceEEEEEccc
Q psy616 1026 EKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1026 ~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
..+|++++|||||||.|+|+||++|
T Consensus 400 ~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 400 GRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred CCccEEEEeccCCCCceEEEEEecC
Confidence 4578999999999999999999975
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-69 Score=629.28 Aligned_cols=384 Identities=23% Similarity=0.336 Sum_probs=334.0
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|||+|||+++|.+.++++||++|.+|++.|+++|. |++. ....++++|++++ ||...+ ++++
T Consensus 2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~--~~~~----------~~~~~~~~~~v~~---~~~~~~-~~~~ 65 (405)
T PRK09116 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPE--WDRY----------DGLNTRLAAPIDD---FELPAH-YTRK 65 (405)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCc--hhhc----------cCCCCceEEEecC---cChhHh-cCHH
Confidence 5799999999999999999999999999999999984 4321 1234577888764 665543 6889
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCC-CCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGP-NQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSA 776 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~-~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~ 776 (1152)
+.+.|||++|+.+.++++||+||||.. ..+++.++||++|++.+.... ..+++..+.....+.+++
T Consensus 66 ~~r~~~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~ 145 (405)
T PRK09116 66 KIRSMGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAV 145 (405)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHH
Confidence 999999999999999999999999954 345678999999987654211 012222333455678999
Q ss_pred HHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-----CCCCcccCCC
Q psy616 777 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDE 851 (1152)
Q Consensus 777 ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls-----~~g~~~~Fd~ 851 (1152)
+||+.||++||+++|+++|+||+.||+.|+++|++|+||+|||||++. ++|.....|..+++++ |+..|||||+
T Consensus 146 ~is~~~~~~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~ 224 (405)
T PRK09116 146 NVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRNDAPELTPRPFDA 224 (405)
T ss_pred HHHHHhCCCCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccCCCCCCCCCCCCcC
Confidence 999999999999999999999999999999999999999999999998 6777777788877765 5678999999
Q ss_pred CCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy616 852 RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHG 931 (1152)
Q Consensus 852 ~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hg 931 (1152)
++|||++|||++++|||++++|+++|++|||+|+|+++++||.+ ++.|+..++.++|+++|+++|++|+||+|||+||
T Consensus 225 ~~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~--~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hg 302 (405)
T PRK09116 225 NRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAH--VTQPQAETMQIAMELALKDAGLAPEDIGYVNAHG 302 (405)
T ss_pred CCCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCc--CCCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcC
Confidence 99999999999999999999999999999999999999999964 7899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCccc-ccCCC
Q psy616 932 TGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI-ILKNS 1010 (1152)
Q Consensus 932 tgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i-~~~~~ 1010 (1152)
|||+.||++|.+||+++|+. .++|+|+|+++||+.+|||++++++++++|++++|||++|+++++|.+ +++
T Consensus 303 tgt~~~D~~E~~Ai~~~fg~------~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~-- 374 (405)
T PRK09116 303 TATDRGDIAESQATAAVFGA------RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALD-- 374 (405)
T ss_pred ccCCCCCHHHHHHHHHHhCC------CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccC--
Confidence 99999999999999999974 268999999999999999999999999999999999999999999987 343
Q ss_pred CeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1011 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
++..+.++|+ .+++++|||||||+|+|+||+
T Consensus 375 --~v~~~~~~~~-----~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 375 --YIMGEAREID-----TEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred --ccCCCCccCC-----CCEEEEeeecCCcccEEEEEC
Confidence 4555555553 578999999999999999984
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-68 Score=630.37 Aligned_cols=389 Identities=27% Similarity=0.432 Sum_probs=344.7
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|+||||||++|++.++++||++|.+|+++++++| +|+... ...+++|++++ ||+.+| |+++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~--~~~~~~-----------~~~~~~g~i~~---f~~~~~-~~~~ 63 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPIT--RFDASD-----------LPVKIAGEVKD---FDPEDY-IDKK 63 (407)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECC--cccccC-----------CCCcEEEEeCC---cChhhc-CCHH
Confidence 479999999999999999999999999999999886 454322 23456787764 999999 9999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 777 (1152)
+++.|||+++++++++++||+|||++++++++.++|||+|+..+.+.. ..+.+..+++...+.++++
T Consensus 64 ~~~~~~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (407)
T TIGR03150 64 EARRMDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQ 143 (407)
T ss_pred HHhhcCHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHH
Confidence 999999999999999999999999999999999999999987654211 1123344556677889999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC-----CCCcccCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDER 852 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~-----~g~~~~Fd~~ 852 (1152)
|++.|||+||+++|+++|+||+.||++|+++|++|+||++||||++..++|.....|...+.++. .+.|+|||.+
T Consensus 144 is~~~gl~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~ 223 (407)
T TIGR03150 144 ISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD 223 (407)
T ss_pred HHHHhCCCCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999889999998874 5679999999
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
+|||++|||++++||+++++|.++|++||++|+|++.++|+.+.....|++.+|.++|++||++||++|+||+|||+|||
T Consensus 224 ~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~t 303 (407)
T TIGR03150 224 RDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGT 303 (407)
T ss_pred CCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCC
Confidence 99999999999999999999999999999999999999999765444566788999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCe
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 1012 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 1012 (1152)
||+++|++|+.++.++|+... ..++|+|+|+++||+++|||+++++|++++|++++|||++|+++|+|.++++
T Consensus 304 gt~~~D~~E~~a~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~---- 376 (407)
T TIGR03150 304 STPLGDKAETKAIKRVFGDHA---YKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLD---- 376 (407)
T ss_pred CCCCCCHHHHHHHHHHhccCC---CCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc----
Confidence 999999999999999998642 3489999999999999999999999999999999999999999999987654
Q ss_pred eeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1013 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1013 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+++.+..+| ++|++++|||||||+|+|+||+
T Consensus 377 ~v~~~~~~~-----~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 377 YVPNEARER-----KIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred ccCCCCccC-----CcCEEEEecccCCCceEEEEeC
Confidence 233344444 3589999999999999999984
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-67 Score=622.09 Aligned_cols=396 Identities=23% Similarity=0.335 Sum_probs=344.7
Q ss_pred ccCCCCCHHHHHHHHHcCCccccccCcccccccccccC---CcCCCCCccceeeeecCCCCCCCCcCCCCCHHHhhcCCH
Q psy616 641 RFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYEN---PIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDP 717 (1152)
Q Consensus 641 ~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ea~~mdp 717 (1152)
+.|.+.++|+||++|++|+++|+++|+.+|+...++.. ........+++++|+++.. .||+.+|+..++ +||
T Consensus 2 vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~-~f~~~~~~~~~~----~~~ 76 (421)
T PTZ00050 2 VTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQS-EFDPSDFAPTKR----ESR 76 (421)
T ss_pred CCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcc-cCChhHcCCccc----CCH
Confidence 57999999999999999999999999888665433321 1111345667899998753 699999876653 599
Q ss_pred HHHHHHHHHHHHHHhcCCC-CCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHHHHHHHcC
Q psy616 718 RQRHLLQESWLALEDAGYG-PNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSARLAYFMD 783 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~-~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~ris~~~~ 783 (1152)
+++++++++++||+||||. ++.+...++||++|.+.+.... ..+++..+++...++++++||+.||
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 9999999999999999998 7888889999999987654321 1123445667778899999999999
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC------CCCCcccCCCCCCCcc
Q psy616 784 LKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDERANGLV 857 (1152)
Q Consensus 784 l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls------~~g~~~~Fd~~a~G~v 857 (1152)
|+||+++|+++|+||+.||++|+++|++|+||++||||++..++|..+..|.+++.++ |++.|||||.+++|++
T Consensus 157 l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G~~ 236 (421)
T PTZ00050 157 LKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGFV 236 (421)
T ss_pred CCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCCEe
Confidence 9999999999999999999999999999999999999999988999999999999886 5678999999999999
Q ss_pred cccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCCC
Q psy616 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKK-SNLNPEDINYIITHGTGTKL 936 (1152)
Q Consensus 858 ~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~-Agi~p~dI~yve~hgtgT~~ 936 (1152)
+|||++++|||++++|+++|++|||+|+|+++++||.+.....|++.+++++|++||++ ||++|+||+|||+|||||++
T Consensus 237 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~ 316 (421)
T PTZ00050 237 MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTPI 316 (421)
T ss_pred eccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCCC
Confidence 99999999999999999999999999999999999987666677889999999999999 99999999999999999999
Q ss_pred CCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecc
Q psy616 937 GDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINK 1016 (1152)
Q Consensus 937 gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~ 1016 (1152)
+|++|.+++.++|+... .++++|+|+|+++||+++|||+++++|++++|++++|||++|+++|+|.+++ .+..
T Consensus 317 ~D~~E~~al~~~~~~~~--~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l-----~~~~ 389 (421)
T PTZ00050 317 GDKIELKAIKKVFGDSG--APKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDL-----NLVQ 389 (421)
T ss_pred CCHHHHHHHHHHhcccc--CCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCc-----cccC
Confidence 99999999999998643 1458999999999999999999999999999999999999999999997753 3444
Q ss_pred ccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1017 SNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1017 ~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
...+|+. .+.|++++|||||||+|+|+||+++
T Consensus 390 ~~~~~~~--~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 390 GKTAHPL--QSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred CcccCcC--CCCCEEEEeeecCCCeeEEEEEeCC
Confidence 4444532 2468999999999999999999863
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-67 Score=619.16 Aligned_cols=382 Identities=25% Similarity=0.371 Sum_probs=342.2
Q ss_pred cEEEEeeeeccCCCCC---HHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCC
Q psy616 632 LIAIIGMSGRFPAARN---INEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 708 (1152)
Q Consensus 632 ~IaIvGm~~~~P~~~~---~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 708 (1152)
+|+|+||++++|.+.+ +++||++|.+|+++++++|..+ ......++|.+++ || ++
T Consensus 2 ~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~--------------~~~~~~~~g~i~~---~~-----~~ 59 (407)
T cd00828 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK--------------SRFDRGVAGQIPT---GD-----IP 59 (407)
T ss_pred CEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc--------------ccCCccEEEEccC---CC-----cC
Confidence 6999999999999999 9999999999999999988654 1223456777754 44 78
Q ss_pred HHHhhcC---CHHHHHHHHHHHHHHHhcCCCCCC-CCCCceEEEEEeccCCchhc---------cccccccccchh--hH
Q psy616 709 PLEAERM---DPRQRHLLQESWLALEDAGYGPNQ-IANQKIGMFVGVEEGSNYQD---------RLDQVNLTSTHN--AI 773 (1152)
Q Consensus 709 ~~ea~~m---dpq~rl~L~~a~~AledAG~~~~~-l~~~~~gv~~g~~~~~~~~~---------~~~~~~~~~~~~--~~ 773 (1152)
+++++.| ||+++++++++++||+||||++++ ++..++|||+|+..+++... ...+...+.... ++
T Consensus 60 ~~~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (407)
T cd00828 60 GWDAKRTGIVDRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNT 139 (407)
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccch
Confidence 8888888 999999999999999999999888 88899999999876653211 123344455555 88
Q ss_pred HHHHHHHHcCC-CCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCC-----CCcc
Q psy616 774 LSARLAYFMDL-KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD-----GKCY 847 (1152)
Q Consensus 774 ~a~ris~~~~l-~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~-----g~~~ 847 (1152)
++++|++.||+ +||+++|+++|+|++.||++|+++|++|+||++||||++... |..+..|..++++|.+ +.|+
T Consensus 140 ~a~~is~~~gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~~~~~~~~ 218 (407)
T cd00828 140 VAGWVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEEEPEEMSR 218 (407)
T ss_pred HHHHHHHHhCcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCCCCCcccC
Confidence 99999999999 999999999999999999999999999999999999999977 8899999999999965 7999
Q ss_pred cCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy616 848 VFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYI 927 (1152)
Q Consensus 848 ~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yv 927 (1152)
|||.+++||++|||++++|||++++|.++|++|||+|+|++.++||.+.+.+. ++.++.++|++||++||++|+||+||
T Consensus 219 pfd~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~i 297 (407)
T cd00828 219 PFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDVI 297 (407)
T ss_pred CCcCCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999998766555 88999999999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCccccc
Q psy616 928 ITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIIL 1007 (1152)
Q Consensus 928 e~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~ 1007 (1152)
|+|||||+.+|++|.+++.++|+... .+++|+|+|+++||+++|||+++++|++++|++++|||++|++++||.++
T Consensus 298 ~~hgtgt~~~D~~E~~ai~~~~~~~~---~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~- 373 (407)
T cd00828 298 SAHGTSTPANDVAESRAIAEVAGALG---APLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVE- 373 (407)
T ss_pred ecccccCccccHHHHHHHHHHHhccC---CCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCcccc-
Confidence 99999999999999999999998653 34799999999999999999999999999999999999999999999873
Q ss_pred CCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEE
Q psy616 1008 KNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 1047 (1152)
Q Consensus 1008 ~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il 1047 (1152)
.+++.++.++|+.. +|++++|||||||+|+|+||
T Consensus 374 ---~~~~~~~~~~~~~~---~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 374 ---HLSVVGLSRDLNLK---VRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred ---cccccCcCccCCCC---ccEEEEecccCCCcceEEEC
Confidence 35677888888632 58999999999999999986
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-67 Score=620.32 Aligned_cols=388 Identities=27% Similarity=0.434 Sum_probs=347.1
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|+||||+|++|++.++++||++|.+|+++++++|..|+ ...+..++|++++ ||+. |.|+++
T Consensus 1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~-------------~~~~~~~~~~i~~---~~~~-~~~~~~ 63 (406)
T cd00834 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDA-------------SGFPSRIAGEVPD---FDPE-DYLDRK 63 (406)
T ss_pred CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccc-------------cCCCccEEEEcCC---CChh-hcCCHH
Confidence 3799999999999999999999999999999999986432 1234567788765 7766 779999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhc-------------cccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD-------------RLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~-------------~~~~~~~~~~~~~~~a~r 777 (1152)
+++.|||+++++++++++||+|||+++++++..++|||+|++.+++... .+++..+++...+.++++
T Consensus 64 ~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (406)
T cd00834 64 ELRRMDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQ 143 (406)
T ss_pred HhccCCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHH
Confidence 9999999999999999999999999999999999999999887653110 123334455566788999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCC-----CCcccCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD-----GKCYVFDER 852 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~-----g~~~~Fd~~ 852 (1152)
|++.||++||+++|+++|+|++.||+.|+++|++|+||.+||||++...+|..+..|..+++++.+ +.|+|||.+
T Consensus 144 ia~~lgl~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~ 223 (406)
T cd00834 144 VAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKD 223 (406)
T ss_pred HHHHhCCCCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCC
Confidence 999999999999999999999999999999999999999999999998889999999999999976 589999999
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
++|+++|||++++|||++++|.++|++||++|+|++.++|+.+.....|+..+|.++|+++|+++|++++||+|||+|||
T Consensus 224 ~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~t 303 (406)
T cd00834 224 RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGT 303 (406)
T ss_pred CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccc
Confidence 99999999999999999999999999999999999999999875555566899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCe
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 1012 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 1012 (1152)
||+.+|++|.++|.++|+.. ..+++|+|+|+++||+++|||+++++|++++|++++|||++|+++|||..+++
T Consensus 304 gt~~~d~~E~~al~~~~~~~---~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~---- 376 (406)
T cd00834 304 STPLNDAAESKAIKRVFGEH---AKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLD---- 376 (406)
T ss_pred cCccccHHHHHHHHHHhccc---CCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc----
Confidence 99999999999999999864 23589999999999999999999999999999999999999999999855443
Q ss_pred eeccccccccccCCCccEEEEcCcCCCcceEEEEE
Q psy616 1013 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 1047 (1152)
Q Consensus 1013 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il 1047 (1152)
.++.+.++|+ .|+++||||||||+|+|+||
T Consensus 377 ~~~~~~~~~~-----~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 377 YVPNEAREAP-----IRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred ccCCCCcccc-----ccEEEEeeecCCceeeEEEC
Confidence 3445778886 38899999999999999996
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >KOG1394|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-68 Score=565.56 Aligned_cols=396 Identities=26% Similarity=0.407 Sum_probs=354.3
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
.++|+|+|||+..|.+.+++++|++|++|+++|+.+.. .+++ ...+...|.|+. |+..-| +++
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~--~d~k-----------~~p~~v~g~Ip~---f~~e~~-~s~ 85 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEG--PDYK-----------SIPFTVAGKIPR---FSVEDY-VSK 85 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccc--cccc-----------cCcchheeeccc---cccccc-cch
Confidence 68899999999999999999999999999999998764 2221 223445566654 776655 899
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCCCCCC---CCCCceEEEEEeccCCch-------------hccccccccccchhhH
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGYGPNQ---IANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAI 773 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~---l~~~~~gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~ 773 (1152)
.+.+.|++-..+.|.++.|||+|||+.+.. .+..++||.+|+..++.. ..+++++.++-...||
T Consensus 86 ~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM 165 (440)
T KOG1394|consen 86 GDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNM 165 (440)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhccc
Confidence 999999999999999999999999998763 345789999999877621 2346778888888999
Q ss_pred HHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC---CC--Cccc
Q psy616 774 LSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP---DG--KCYV 848 (1152)
Q Consensus 774 ~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~---~g--~~~~ 848 (1152)
.++.||..|||+||+.++.|||++|..+|.-|.+.|+.|+.|++|+||++..++|....+|++.+.||. +. .|||
T Consensus 166 ~ag~vsm~~gl~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRP 245 (440)
T KOG1394|consen 166 AAGYVSMKYGLRGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRP 245 (440)
T ss_pred ccchhhhhhcCcCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999985 33 7999
Q ss_pred CCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy616 849 FDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYII 928 (1152)
Q Consensus 849 Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve 928 (1152)
||.++||||+|||+|++|||+|++|.++|++|||+|.|++++.|.++..-+.|++.+-..+|++||++||+.|+||+||+
T Consensus 246 fD~~RdGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvN 325 (440)
T KOG1394|consen 246 FDKKRDGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVN 325 (440)
T ss_pred CccCCCceeeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeee
Confidence 99999999999999999999999999999999999999999999999887888899999999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccC
Q psy616 929 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008 (1152)
Q Consensus 929 ~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~ 1008 (1152)
+|+|.|++||.+|.+|++++|+..... .+|.|+|+.|||+.+|||.+.-|-++++++++++||++|++.|.+.++++
T Consensus 326 AHATST~~GD~aE~~Ai~~vf~~~~~~---~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~ 402 (440)
T KOG1394|consen 326 AHATSTPLGDAAEAEAIKRVFGEHNIA---SKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLD 402 (440)
T ss_pred cccccCcCchHHHHHHHHHHhccCCcc---cccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCcccccc
Confidence 999999999999999999999986543 37999999999999999999999999999999999999999999977765
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
|++....+|... .++|+++.|||||||+|+.+++..|
T Consensus 403 ----~~~~~~~~~~~~-~~~~valsNSFGFGGtNaSl~fa~~ 439 (440)
T KOG1394|consen 403 ----YVPLKASEKKGG-NKVRVALSNSFGFGGTNASLCFAKF 439 (440)
T ss_pred ----cccccccccccc-ccceEEEecccccCCcchhheeeec
Confidence 455566667542 4679999999999999999998765
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-65 Score=602.83 Aligned_cols=389 Identities=21% Similarity=0.281 Sum_probs=329.1
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|||||||+++|.+.++++||++|.+|+++|+++|..++. .+.....+...+.++|++++ ||+..+ ++++
T Consensus 2 ~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~ 72 (410)
T PRK07103 2 DEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQ-----VPDDAGAGLASAFIGAELDS---LALPER-LDAK 72 (410)
T ss_pred CCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCccccc-----ccccccccCCCceEEEEeCC---CChhhc-CCHH
Confidence 57999999999999999999999999999999999864321 00111112334567888875 444333 7888
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCch------------hccccccccccchhhHHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY------------QDRLDQVNLTSTHNAILSARL 778 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~------------~~~~~~~~~~~~~~~~~a~ri 778 (1152)
..+.||++++++++++++||+|||+. ..+..++|||+|.+..... ...+.+.......++.++++|
T Consensus 73 ~~r~~~~~~~lal~Aa~eAl~dAgl~--~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i 150 (410)
T PRK07103 73 LLRRASLSAQAALAAAREAWRDAALG--PVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLC 150 (410)
T ss_pred HhhcCCHHHHHHHHHHHHHHHhcCcC--CCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHH
Confidence 89999999999999999999999994 4567899999997643211 001122223344567789999
Q ss_pred HHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-------CCCCcccCCC
Q psy616 779 AYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-------PDGKCYVFDE 851 (1152)
Q Consensus 779 s~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls-------~~g~~~~Fd~ 851 (1152)
|+.||++||+++|+++|+|++.||++|+++|++|+||+|||||++..++|.....|..++.++ |++.|||||.
T Consensus 151 a~~lgl~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~ 230 (410)
T PRK07103 151 SEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQ 230 (410)
T ss_pred HHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCC
Confidence 999999999999999999999999999999999999999999999889999999999998875 5679999999
Q ss_pred CCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy616 852 RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHG 931 (1152)
Q Consensus 852 ~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hg 931 (1152)
++||+++|||++++|||++++|.++|++||++|+|+++++||++ ++.|+..++.++|++||++||++|+||+|||+||
T Consensus 231 ~~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~--~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hg 308 (410)
T PRK07103 231 DRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANR--GPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHG 308 (410)
T ss_pred CCCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCC--CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccC
Confidence 99999999999999999999999999999999999999999986 6799999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCC-CcccccCCC
Q psy616 932 TGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE-NNYIILKNS 1010 (1152)
Q Consensus 932 tgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~-np~i~~~~~ 1010 (1152)
|||+.+|++|.++| |+.. ...++|+|+|+++||+.+|||++++++++++|++++|||++|+++| +|.+++-
T Consensus 309 tgt~~~D~~E~~al---~~~~---~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v-- 380 (410)
T PRK07103 309 TGSPLGDETELAAL---FASG---LAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWV-- 380 (410)
T ss_pred CCCCCCCHHHHHHH---hcCC---CCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCcc--
Confidence 99999999999999 3322 2348999999999999999999999999999999999999999987 6554322
Q ss_pred CeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1011 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
.... + ..+.|++++|||||||+|+|+||++
T Consensus 381 ----~~~~--~---~~~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 381 ----GSTA--E---SARIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred ----CCCC--c---CCCCCEEEEecccCCCceEEEEEeC
Confidence 2211 1 1346899999999999999999974
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-63 Score=575.89 Aligned_cols=364 Identities=25% Similarity=0.362 Sum_probs=309.6
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|+|+|||+..|.+. +++||++|++|++.|++++.. +. .+ .|...+++..+
T Consensus 2 ~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~--~~------~~------------------~~~~~~~~~~~- 53 (381)
T PRK05952 2 MKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPF--PE------LP------------------PLPLGLIGNQP- 53 (381)
T ss_pred CeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCcc--cc------cc------------------cccceeecccc-
Confidence 4799999999999999 999999999999999987642 10 00 01111111111
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCch------hc----------cccccccccchhhHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY------QD----------RLDQVNLTSTHNAIL 774 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~------~~----------~~~~~~~~~~~~~~~ 774 (1152)
..|+ |+...++.+||+|||+.+. ..++||++|++.+... .. .+.+..+.....|.+
T Consensus 54 --~~~~---~~~~~a~~~Al~dagl~~~---~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 125 (381)
T PRK05952 54 --SSLE---DLTKTVVTAALKDAGLTPP---LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQA 125 (381)
T ss_pred --cccc---HHHHHHHHHHHHhcCCCCC---CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHH
Confidence 1233 3556889999999999753 3789999998765411 00 111223344567889
Q ss_pred HHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCC
Q psy616 775 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN 854 (1152)
Q Consensus 775 a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~ 854 (1152)
+++||+.|+++||+++++++|+||+.||.+|++.|++|+||++||||++..++|..+..|..++++++++ |||||.++|
T Consensus 126 a~~ia~~~~~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~-~rPfd~~r~ 204 (381)
T PRK05952 126 AIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTG-AYPFDRQRE 204 (381)
T ss_pred HHHHHHHhCCCCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCC-CCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999989999999999999999875 999999999
Q ss_pred CcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy616 855 GLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGT 934 (1152)
Q Consensus 855 G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT 934 (1152)
||++|||++++|||++++|+++|++|||+|+|+++++||.+...+.|+..++.++|++||+++|++|+||+|||+|||||
T Consensus 205 G~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt 284 (381)
T PRK05952 205 GLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTAT 284 (381)
T ss_pred CccccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCC
Confidence 99999999999999999999999999999999999999988777888999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeee
Q psy616 935 KLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYI 1014 (1152)
Q Consensus 935 ~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v 1014 (1152)
+.+|++|.+||.++|+. .++|+|+|+++||+++|||++++++++++|++++|||++|+++|++.+++..
T Consensus 285 ~~~D~~E~~al~~~fg~------~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~----- 353 (381)
T PRK05952 285 RLNDQREANLIQALFPH------RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVR----- 353 (381)
T ss_pred CCCcHHHHHHHHHHcCC------CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCC-----
Confidence 99999999999999973 2789999999999999999999999999999999999999999876554321
Q ss_pred ccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1015 NKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1015 ~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+++ ..+.|++++|||||||+|+|+||++
T Consensus 354 --~~~-----~~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 354 --QAQ-----QSPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred --Ccc-----cCCCCEEEEeeecCCCeeEEEEEeC
Confidence 111 2346899999999999999999963
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-61 Score=555.92 Aligned_cols=390 Identities=27% Similarity=0.380 Sum_probs=338.0
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
.++|+|+||+...|.+.+.+++|++|..|++.|..++. |+...+ .++..|.+.+ | +.+ +++
T Consensus 2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~--~~~~~~-----------~~~~~~~i~~---~-~~~--~~~ 62 (412)
T COG0304 2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITR--FDASGL-----------GVKIAGEIKD---L-DDQ--IAK 62 (412)
T ss_pred CceEEEecceeeecccCCHHHHHHHHhcCCCCCCcccc--ccccCC-----------CCcccccccc---c-ccc--cch
Confidence 46799999999999999999999999999998887663 332221 2334444443 4 222 577
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCC-ceEEEEEeccCCchh--------------ccccccccccchhhHH
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVGVEEGSNYQ--------------DRLDQVNLTSTHNAIL 774 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~-~~gv~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~ 774 (1152)
++.++||+.+++.+.++.+|++|||+. ...... |+||++|+..++... ..+.+..++....++.
T Consensus 63 ~~~~~~d~~~~~a~~Aa~eAl~dAgl~-~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 141 (412)
T COG0304 63 KERRFMDRFSQLAVVAAVEALEDAGLD-NELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLA 141 (412)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHcCCC-cccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchH
Confidence 888899999999999999999999998 332333 999999987665321 1134566677788999
Q ss_pred HHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCC-----CCcccC
Q psy616 775 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD-----GKCYVF 849 (1152)
Q Consensus 775 a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~-----g~~~~F 849 (1152)
++.+|..|+++||++++.|||+||..||..|++.|+.|++|++||||++..+++.....|..++.||++ ..||||
T Consensus 142 a~~vs~~~g~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPf 221 (412)
T COG0304 142 AGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPF 221 (412)
T ss_pred HHHHHHHhCCCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999964 689999
Q ss_pred CCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy616 850 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 929 (1152)
Q Consensus 850 d~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~ 929 (1152)
|+++||||+|||+|++||+++++|+++|++|||+|.|++.+.|+++.+...|.+++..++|+.||++||++|+||+||.+
T Consensus 222 d~~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYina 301 (412)
T COG0304 222 DKNRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINA 301 (412)
T ss_pred CCCCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeC
Confidence 99999999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCC
Q psy616 930 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 1009 (1152)
Q Consensus 930 hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~ 1009 (1152)
|||||+.+|..|..||+++|+....+ ++|.|.|+.+||+.+|+|..++|-++|+|+++++||++|++++.|.. .
T Consensus 302 HgTsT~~nD~~E~~ai~~vfg~~~~~---~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~---~ 375 (412)
T COG0304 302 HGTSTPANDKAESLAIKRVFGEHAKS---LPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEA---A 375 (412)
T ss_pred CCccCCCccHHHHHHHHHHhcccccC---ceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCccc---c
Confidence 99999999999999999999975432 78999999999999999999999999999999999999999998842 1
Q ss_pred CCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1010 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1010 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
..-+++.+.+.+ ..+.++.|||||||+|+.+++..+
T Consensus 376 ~l~~v~~~~~~~-----~~~~~lsnsfGFGG~Na~lv~~~~ 411 (412)
T COG0304 376 DLDVVPNEARTG-----AVRAALSNSFGFGGTNASLVFKRY 411 (412)
T ss_pred cccccCCccccc-----ceeEEEecccccCCcceEEEEecC
Confidence 122344433332 368999999999999999999865
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-61 Score=569.79 Aligned_cols=387 Identities=24% Similarity=0.340 Sum_probs=326.2
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
..+|+|+|||++.|.+.++++||++|.+|++.|++++ +|+.. ...++++|.++ .|+..+
T Consensus 10 ~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~--~~~~~-----------~~~~~~~g~~~---~~~~~~----- 68 (425)
T PRK06501 10 RPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTIT--RFPTE-----------GLRTRIAGTVD---FLPESP----- 68 (425)
T ss_pred CcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCC--ccccc-----------CCCCceEEEEe---eccccc-----
Confidence 4579999999999999999999999999999999875 44321 22456777763 222222
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCC--------------CCceEEEEEeccCCch--hccc-------ccccc
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGYGPNQIA--------------NQKIGMFVGVEEGSNY--QDRL-------DQVNL 766 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~--------------~~~~gv~~g~~~~~~~--~~~~-------~~~~~ 766 (1152)
...++..+++.+.++++||+|||+...++. ..++|++.+....... ...+ .+..+
T Consensus 69 --~~~~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (425)
T PRK06501 69 --FGASALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALH 146 (425)
T ss_pred --ccccCHHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhh
Confidence 224778899999999999999999643322 4577887776543211 1100 01112
Q ss_pred ccchhhHHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-----
Q psy616 767 TSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----- 841 (1152)
Q Consensus 767 ~~~~~~~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls----- 841 (1152)
.....+.++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||++..++|..+..|..++.+|
T Consensus 147 ~~~~~~~~a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~ 226 (425)
T PRK06501 147 ERFQFGSIADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDP 226 (425)
T ss_pred hhhcccHHHHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCC
Confidence 233445789999999999999999999999999999999999999999999999999989999999999999887
Q ss_pred CCCCcccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q psy616 842 PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNP 921 (1152)
Q Consensus 842 ~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p 921 (1152)
+++.|||||.+++||++|||++++|||++++|.++|++||++|.|++.++|+.+.....|+...+.++|++||+++|++|
T Consensus 227 ~~~~~rpfd~~r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p 306 (425)
T PRK06501 227 PEKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTP 306 (425)
T ss_pred CCcccCCCCCCCCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 56799999999999999999999999999999999999999999999999998777778899999999999999999999
Q ss_pred CCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCC
Q psy616 922 EDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE 1001 (1152)
Q Consensus 922 ~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~ 1001 (1152)
+||+||++|||||+.+|++|..+|.++|+.. ...++|+|+|+++||+.+|||++++++++++|++++|||++|+++|
T Consensus 307 ~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~---~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~ 383 (425)
T PRK06501 307 EQIDYINAHGTSTPENDKMEYLGLSAVFGER---LASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNP 383 (425)
T ss_pred HHcCEEEecCccCcchHHHHHHHHHHHhccc---CCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCC
Confidence 9999999999999999999999999999743 2348999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1002 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1002 np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
+|.++++- ++...++ .+.+.+++|||||||+|+|+||++++
T Consensus 384 ~~~~~~~~----~~~~~~~-----~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 384 DPAIPLDV----VPNVARD-----ARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCCCccc----CCCcccC-----CCCCEEEEeCccCCCeeEEEEEecCC
Confidence 99886643 2222222 24688999999999999999999865
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-61 Score=548.35 Aligned_cols=321 Identities=26% Similarity=0.354 Sum_probs=288.7
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHHHHHHH
Q psy616 715 MDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSARLAYF 781 (1152)
Q Consensus 715 mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~ris~~ 781 (1152)
||+.+++.+.++++|++|||+. .+..|+||++|++.+.... ..+++..++....++++++||+.
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~---~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~ 77 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT---EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIK 77 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC---CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHH
Confidence 6889999999999999999976 4567899999987665311 12344556777889999999999
Q ss_pred cCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC------CCCCcccCCCCCCC
Q psy616 782 MDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDERANG 855 (1152)
Q Consensus 782 ~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls------~~g~~~~Fd~~a~G 855 (1152)
|||+||+++|+++|+||+.||+.|+++|++|+||++||||++..++|..+..|..+++|+ |++.|||||.++||
T Consensus 78 ~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G 157 (342)
T PRK14691 78 HHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDG 157 (342)
T ss_pred hCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999987 66899999999999
Q ss_pred cccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy616 856 LVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTK 935 (1152)
Q Consensus 856 ~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~ 935 (1152)
|++|||++++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.++|++||+++|++|+||+|||+|||||+
T Consensus 158 ~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~ 237 (342)
T PRK14691 158 FVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTP 237 (342)
T ss_pred ccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCc
Confidence 99999999999999999999999999999999999999876667889999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeec
Q psy616 936 LGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 1015 (1152)
Q Consensus 936 ~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~ 1015 (1152)
++|++|.+||+++|+.. ..++|+|+|+++||+++|||++++++++|+|++++|||++|+++|+|.++ +.. ++.
T Consensus 238 ~~D~~E~~Ai~~~fg~~----~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~--~~~-~v~ 310 (342)
T PRK14691 238 VGDLGEINAIKHLFGES----NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAK--GLN-IIA 310 (342)
T ss_pred CCCHHHHHHHHHHhCCC----CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCcccc--ccC-ccc
Confidence 99999999999999853 34899999999999999999999999999999999999999999999763 112 233
Q ss_pred cccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1016 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1016 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
.+.++| +.|++++|||||||+|+|+||+++
T Consensus 311 ~~~~~~-----~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 311 GNAQPH-----DMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred CCCccC-----CCCEEEEeCccCCCeeEEEEEeec
Confidence 444443 368899999999999999999976
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-58 Score=532.96 Aligned_cols=362 Identities=16% Similarity=0.182 Sum_probs=302.4
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
.++|+|+|||+..|.+.++|+||++|.+|++. +.++..+|+. ..... +.+++ |+. + +++
T Consensus 5 ~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~-------------~~~~~---~~~~~-~~~--~-~~~ 63 (398)
T PRK06519 5 PNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAP-------------YPVHP---LPEID-WSQ--Q-IPK 63 (398)
T ss_pred CCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccC-------------cCccc---ccccC-hhh--c-CCc
Confidence 46899999999999999999999999999997 3333222211 01111 12221 332 2 445
Q ss_pred H-HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------------------ccccc
Q psy616 710 L-EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------------------DRLDQ 763 (1152)
Q Consensus 710 ~-ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------------------~~~~~ 763 (1152)
+ +.+.||+.+|+.+.++.+||+|||+........++||++|++.+.... ..+++
T Consensus 64 ~~~~r~~~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 143 (398)
T PRK06519 64 RGDQRQMETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRP 143 (398)
T ss_pred hhhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccCh
Confidence 5 778999999999999999999999976665667999999997654211 11334
Q ss_pred cccccchhhHHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCC
Q psy616 764 VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD 843 (1152)
Q Consensus 764 ~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~ 843 (1152)
..++...+|.++++||+.||++||++||+++|+||+.||++|+++|++|+||++||||++..++|.....|..++.++.+
T Consensus 144 ~~~~~~~~n~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~ 223 (398)
T PRK06519 144 TLFLAQLSNLLAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKG 223 (398)
T ss_pred hhhhhhhhhHHHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCC
Confidence 55667788899999999999999999999999999999999999999999999999999998999999999999999864
Q ss_pred CCccc-CCC---CCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q psy616 844 GKCYV-FDE---RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNL 919 (1152)
Q Consensus 844 g~~~~-Fd~---~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi 919 (1152)
.|+| ||. ++|||++|||++++|||++++|+++|++|||+|+|++.++++ ++..+++++|++||++||+
T Consensus 224 -~~~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~~-------~~~~~~~~am~~AL~~Agl 295 (398)
T PRK06519 224 -GWAPVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRAR-------RAPGDLEASLERLLKPAGG 295 (398)
T ss_pred -CCCchhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCCC-------CChHHHHHHHHHHHHHCCC
Confidence 6777 666 699999999999999999999999999999999999754332 1346889999999999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCC
Q psy616 920 NPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 999 (1152)
Q Consensus 920 ~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~ 999 (1152)
|+|||||++|||||+++|..|.+||+++|+ .+|+|+|+++||+.+|||++++++++|+|++++|||++|+
T Consensus 296 -~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~--------~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~- 365 (398)
T PRK06519 296 -LAAPTAVISGATGAHPATAEEKAALEAALA--------GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDA- 365 (398)
T ss_pred -cccCCEEEeCCCCCCCccHHHHHHHHHHcC--------CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCC-
Confidence 899999999999999999999999999995 3699999999999999999999999999999999999997
Q ss_pred CCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1000 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1000 ~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+|.. | .....|.+.|++||++|.-.-.++|.
T Consensus 366 --~~~~--------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 366 --SGEK--------------P---MSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred --Cccc--------------C---ccccccEEEEEeeccCCcceeEEEEe
Confidence 2221 1 12356889999999999888887764
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-57 Score=530.19 Aligned_cols=372 Identities=22% Similarity=0.312 Sum_probs=311.5
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCC-ccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNK-DVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~-~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
++|+|+|||+..|.+.++++||++|++|+ +.|++++. |+.. ...+.|.+++ ||. ..+++
T Consensus 2 ~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~--~~~~-------------~~~~~g~~~~---~~~--~~~~~ 61 (392)
T PRK09185 2 TPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDF--WLVD-------------LPTWVGEVVG---VEL--PALPA 61 (392)
T ss_pred CcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcc--cccc-------------CCeEEEEecC---ccc--ccCCH
Confidence 47999999999999999999999999999 99998763 2210 1123344443 553 22677
Q ss_pred HHhhcCCHHHHHHHHHHHH---HHHhcCCCCCCCCCCceEEEEEeccCCchh------c------c-ccccccccchhhH
Q psy616 710 LEAERMDPRQRHLLQESWL---ALEDAGYGPNQIANQKIGMFVGVEEGSNYQ------D------R-LDQVNLTSTHNAI 773 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~---AledAG~~~~~l~~~~~gv~~g~~~~~~~~------~------~-~~~~~~~~~~~~~ 773 (1152)
+..+.|++..|+.+.++.+ |++|++ .+.+..|+||++|++.+.... . . .....++....+.
T Consensus 62 ~~~~~~~~~~~~~~~a~~~~~~a~~~~~---~~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (392)
T PRK09185 62 ALAAFDCRNNRLALLALQQIEPAVEAAI---ARYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGS 138 (392)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHhhc---ccCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccH
Confidence 7888899988887776665 566665 344567999999987654211 0 0 0122334455678
Q ss_pred HHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCC
Q psy616 774 LSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERA 853 (1152)
Q Consensus 774 ~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a 853 (1152)
.+++|++.||++||+++++++|+|++.||++|+++|++|+||.+||||++. +++.....|..+++++. +.|+|||.++
T Consensus 139 ~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~~-~~~~Pfd~~~ 216 (392)
T PRK09185 139 LADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLSP-QPCRPFSANR 216 (392)
T ss_pred HHHHHHHHhCCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccCC-CccCCCcCCC
Confidence 999999999999999999999999999999999999999999999999997 56777788889998885 6899999999
Q ss_pred CCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy616 854 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTG 933 (1152)
Q Consensus 854 ~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtg 933 (1152)
+|+++|||++++||+++ ++++ +.|.|++.++|+++...+.|+..++.++|++||++||++|+||+|||+||||
T Consensus 217 ~G~~~gEGaa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtg 289 (392)
T PRK09185 217 DGINIGEAAAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTA 289 (392)
T ss_pred CccceeceEEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCC
Confidence 99999999999999987 3444 4799999999998877778889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCee
Q psy616 934 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 1013 (1152)
Q Consensus 934 T~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~ 1013 (1152)
|+.+|++|..||.++|+.. .+|+|+|+++||+++|||++++++++++|+++++||++|+++++|.+++. +
T Consensus 290 t~~~D~~E~~al~~~f~~~------~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~----~ 359 (392)
T PRK09185 290 TPLNDAMESRAVAAVFGDG------VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPL----Y 359 (392)
T ss_pred CcCCCHHHHHHHHHHhCCC------CceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc----c
Confidence 9999999999999999752 46999999999999999999999999999999999999999999988643 3
Q ss_pred eccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1014 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1014 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
++.+..+| ++|++++|||||||+|+|+||++
T Consensus 360 ~~~~~~~~-----~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 360 LVENAQAL-----AIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred cCCCCccC-----CCCEEEEeCccCCceeEEEEEEe
Confidence 44555555 36899999999999999999985
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=386.24 Aligned_cols=241 Identities=35% Similarity=0.570 Sum_probs=206.0
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++||||||+|++|++.++++||++|.+|+++++++|. ||+...++..+....++.+.+.+++++ .+.||+.+|+++++
T Consensus 2 ~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (254)
T PF00109_consen 2 RRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPE-RWDPSDYYDPPSRVAGEIDDKKGGFID-DFDFDAYFFGIPPR 79 (254)
T ss_dssp S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCS-SSCHTTSTTSSCSEEECBSSSEESSST-TTCGGGTSTCHHHH
T ss_pred CEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeecc-ccccccccccCCcccccccccccceee-ecccccccccccch
Confidence 6899999999999999999999999999999999999 999998886666666778888899999 88999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEEEeccCCchh--c---------cccccccccchhhHHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQK-IGMFVGVEEGSNYQ--D---------RLDQVNLTSTHNAILSARL 778 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~-~gv~~g~~~~~~~~--~---------~~~~~~~~~~~~~~~a~ri 778 (1152)
+++.|||++|++|.++++||+|||+.+..+++.+ +|||+|++.+++.. . ...+..+.....+.++++|
T Consensus 80 ~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~i 159 (254)
T PF00109_consen 80 EARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRI 159 (254)
T ss_dssp HHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHH
T ss_pred hhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccch
Confidence 9999999999999999999999999988877775 99999998874310 0 0111122234778899999
Q ss_pred HHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCccc
Q psy616 779 AYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVP 858 (1152)
Q Consensus 779 s~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~ 858 (1152)
|+.||++||+++|+++|+||+.||++|+++|++|+||+|||||++..++|..+..|.+++++++++.|+|||.+++||++
T Consensus 160 a~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~ 239 (254)
T PF00109_consen 160 AILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVL 239 (254)
T ss_dssp HHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-B
T ss_pred hhhcCCCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEcccchh
Q psy616 859 SEAVVAVVLKRLSRA 873 (1152)
Q Consensus 859 gEG~~~vvLk~l~~A 873 (1152)
|||+|++|||++++|
T Consensus 240 gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 240 GEGAGALVLERLEHA 254 (254)
T ss_dssp B-EEEEEEEEEHHHH
T ss_pred ECceEEEEEEEhhhC
Confidence 999999999999987
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=375.95 Aligned_cols=314 Identities=26% Similarity=0.377 Sum_probs=276.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh--------ccccccccccchhhHHHHHHHHHcCCCCCcc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ--------DRLDQVNLTSTHNAILSARLAYFMDLKGPVM 789 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~--------~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~ 789 (1152)
+++++++++++||+|||++++.......++++|++.+.+.. ..+.+..+.+...+.++++|+..++++||++
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~ 90 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAY 90 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCCCcc
Confidence 78999999999999999997776777789999987665421 1223444555566778999999999999999
Q ss_pred cccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcc
Q psy616 790 AINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKR 869 (1152)
Q Consensus 790 tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~ 869 (1152)
+|+++|+|++.||++|+++|++|+||.+||+|++....+.........+++++++.|+|||...+|+++|||++++||++
T Consensus 91 ~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL~~ 170 (332)
T cd00825 91 DVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEE 170 (332)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEECc
Confidence 99999999999999999999999999999999998877776666666778889999999999999999999999999999
Q ss_pred cchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh
Q psy616 870 LSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVF 949 (1152)
Q Consensus 870 l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f 949 (1152)
.++|.++|+++|++|.|++.++++.......|....+.++++++|+++|++++||+|+++|++|++..|.+|.+++...+
T Consensus 171 ~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~ 250 (332)
T cd00825 171 LEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEF 250 (332)
T ss_pred HHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHh
Confidence 99999999999999999999999987777788899999999999999999999999999999999999999999999888
Q ss_pred cccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCcc
Q psy616 950 KNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLR 1029 (1152)
Q Consensus 950 ~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r 1029 (1152)
+.. ++++.++|.++||+.+|+|+.+|++++++++++.+||++|+.++++.. ..+..+..+ .+.+
T Consensus 251 ~~~-----~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~------~~~~~~~~~-----~~~~ 314 (332)
T cd00825 251 GDK-----SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAG------LNIVTETTP-----RELR 314 (332)
T ss_pred CCC-----CceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCccc------CcccCCCCC-----CCCC
Confidence 642 478999999999999999999999999999999999999999999832 122333222 2357
Q ss_pred EEEEcCcCCCcceEEEEE
Q psy616 1030 IGAVSAFGMSGTNAHIVL 1047 (1152)
Q Consensus 1030 ~a~v~sfG~gG~nah~il 1047 (1152)
++++++||+||+|+|+||
T Consensus 315 ~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 315 TALLNGFGLGGTNATLVL 332 (332)
T ss_pred EEEEeeecCCCeeEEEeC
Confidence 899999999999999986
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-38 Score=422.79 Aligned_cols=430 Identities=17% Similarity=0.227 Sum_probs=321.3
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----cCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----PNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVF 101 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv 101 (1152)
.+.+++|+.|+.+++.+|+++|.++|. ++++..++...-. ...-..|++++.+.+++..+++++.+....++++|
T Consensus 1754 ~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 1833 (2582)
T TIGR02813 1754 SGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVVSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDGFI 1833 (2582)
T ss_pred cCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccccccccccccccccccccccchHHHHHHHHhhhccccccceEE
Confidence 467899999999999999999998876 6666555322111 11234799999999999999999999889999999
Q ss_pred EeCCCCCccc------------ccChHHHHHHHHHHHhC---CCCceEEEEEc--ccccccCCccc-------hhhhHHH
Q psy616 102 YLWPLEDKNC------------IYNIMPIIYFLQAVKKS---KLYLRKLIISG--ISINKKNEEDL-------YYCYFNS 157 (1152)
Q Consensus 102 ~lw~~~~~~~------------~~~~~~l~~l~qal~~~---~~~~~~~~v~~--~~~~~~~~~~~-------~~~~~~~ 157 (1152)
|||+...... ...+...|.++|.+... ..+..++.|++ +.+...+.+.. ..+.+++
T Consensus 1834 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~~a~ 1913 (2582)
T TIGR02813 1834 HLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKAELNQAA 1913 (2582)
T ss_pred EeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccccchhhhh
Confidence 9999754310 01123334455543221 11233444443 22333222221 2345788
Q ss_pred HHHHHHHHHHHcCCCcEEEEEecCccCcchHHHHHHHHHHhCCC-Cc-eEEEEEcCc---eEEEEeEeEecccc--cccC
Q psy616 158 WVAFERSLHIIMPETQISIVFAEKITNFNIKNWINILFKELQEP-KL-FSIMYYGND---LIRYQLNIKSIILK--DFKN 230 (1152)
Q Consensus 158 ~~g~~r~~~~e~p~~~~~~vd~~~~~~~~~~~~~~~l~~el~~~-~~-~~va~r~~~---~~r~~~~~~~~~~~--~~~~ 230 (1152)
++||+|+++.|+|++.|++||+++..+ .+..+..+++|+... .. .+|.||++. ..|++....+...+ ....
T Consensus 1914 l~Gl~Ktl~~E~P~~~~r~vDl~~~~~--~~~~a~~l~~El~~~~~~~~eVg~~~~~~~~g~R~~~~~~~~~~~~~~~~~ 1991 (2582)
T TIGR02813 1914 LAGLTKTLNHEWNAVFCRALDLAPKLD--ADKAATAVNDELLDIDGSIVEVGHDTDNLSNGSRLTLSAVVTDTAIAKGSN 1991 (2582)
T ss_pred HHHHHHhHHHHCCCCeEEEEeCCCCcC--hHHHHHHHHHHHhccCCCceEEEeccccccccceeEEeccCCCCccccccc
Confidence 999999999999999999999987543 467778899999653 33 699999731 15665433322211 1233
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch-------------------------------------
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN------------------------------------- 273 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~------------------------------------- 273 (1152)
..|.++++||||||++|||+++|++|+++|.++|++++|+...
T Consensus 1992 ~~l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1992 AALNSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 5688999999999999999999999999977789999988210
Q ss_pred -----------HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHH
Q psy616 274 -----------SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVL 342 (1152)
Q Consensus 274 -----------~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~ 342 (1152)
....+.+++.|.++.|+.|||+|.++++++++++.++ ++||+||||||+.. ++.+.+++.++|+++|
T Consensus 2072 ~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-~~~i~~~t~e~f~~v~ 2149 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-DKHIQDKTLEEFNAVY 2149 (2582)
T ss_pred cccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-CCCcccCCHHHHHHHH
Confidence 1123345567889999999999999999999999877 78999999999988 8899999999999999
Q ss_pred hhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCC
Q psy616 343 SSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWP 422 (1152)
Q Consensus 343 ~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg 422 (1152)
++|+.|+++|++++.+. ..++||+|||+++++|++||++|+++|++|+.|++.++.+.. ++++++|+||
T Consensus 2150 ~~nv~G~~~Ll~al~~~-------~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~----~irV~sI~wG 2218 (2582)
T TIGR02813 2150 GTKVDGLLSLLAALNAE-------NIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP----SAKVMSFNWG 2218 (2582)
T ss_pred HHHHHHHHHHHHHHHHh-------CCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC----CcEEEEEECC
Confidence 99999999999996543 346799999999999999999999999999999999987642 4699999999
Q ss_pred cccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeeeeechh
Q psy616 423 LWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLSGE 475 (1152)
Q Consensus 423 ~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~v~~~~ 475 (1152)
+|. +||... .....+...|+..++.+++...|...|..+....+++.++
T Consensus 2219 ~wd-tgm~~~---~l~~~~~~rg~~~ipl~ag~~~f~~eL~s~~g~~v~Vg~~ 2267 (2582)
T TIGR02813 2219 PWD-GGMVNP---ALKKMFNDRGVYVIPLDAGAELFVSQLLSDTGAQLLVGTD 2267 (2582)
T ss_pred eec-CCccch---hHHHHHHhcccccCCCchhHHHhHHHhcCCCCCEEEECCC
Confidence 996 577532 1223455678888999999999976676654334444444
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=337.09 Aligned_cols=316 Identities=18% Similarity=0.145 Sum_probs=242.6
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|+|+|++++.|-+.+.++-|..|..|.+.....+ +. +.... ..+..+. + +-++
T Consensus 3 ~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~--~~------~~~~~--~~i~~~~-~--------------~~~~ 57 (348)
T PRK06147 3 RALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETR--FI------DPPGG--EWLIGAP-V--------------PLPP 57 (348)
T ss_pred CceEEEecceeecCcCCHHHHHHHHHcccccccccc--cc------cCCCC--CceEeec-C--------------cCCc
Confidence 469999999999999999999999988876553221 11 10000 0000000 1 1111
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCc
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPV 788 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs 788 (1152)
.....++..+|+.++..+||+++|. ++..+++++++....... .. +. ......++.++..+|+ +||+
T Consensus 58 ~~~~~~r~~~La~~Al~~aL~~a~~----~~~~~i~lil~~~~~~~~-~~--~~----~~~~~~~~~~~~~lG~~~~~~~ 126 (348)
T PRK06147 58 PWRGPERLAEMAAPAIAEALEGLPA----LDASEAPLLLCVAEEERP-GR--PP----DLEERLLRELEARLGLRLEPGS 126 (348)
T ss_pred ccCchHHHHHHHHHHHHHHHHhccc----ccccCCcEEEEeCchhcC-CC--Cc----chHHHHHHHHHHHhCCCCCCCc
Confidence 1112346778999999999999983 123446788876442100 00 00 1112235667777777 6899
Q ss_pred ccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEc
Q psy616 789 MAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLK 868 (1152)
Q Consensus 789 ~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk 868 (1152)
++|.++|+|++.||+.|++.|++|+||.+||||++..+++.....|...+.+.. +.+++||++|||++++||+
T Consensus 127 ~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~-------~~~~~G~v~GEGA~a~vLe 199 (348)
T PRK06147 127 AVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT-------SQNSNGFIPGEAAAAVLLG 199 (348)
T ss_pred ccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC-------CCCCCceeeeceEEEEEEc
Confidence 999999999999999999999999999999999999888877777766554432 1378999999999999999
Q ss_pred ccchhhcCCCceEEEEEEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHH
Q psy616 869 RLSRALSDGDPIHAIIRGSGINYDGKTNGITA-PNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHD 947 (1152)
Q Consensus 869 ~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~-P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~ 947 (1152)
++++|+++|++||+ .|.+.+.++.+..... +++.++.++|++||+++|++|+||+||++|||||+.+|..|..++.+
T Consensus 200 ~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~ 277 (348)
T PRK06147 200 RPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMR 277 (348)
T ss_pred cHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHH
Confidence 99999999999999 6777777775332223 37899999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCC
Q psy616 948 VFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPA 994 (1152)
Q Consensus 948 ~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp 994 (1152)
+|+... ...++.++|+++||+.+|+|+++++.++++|++|++|+
T Consensus 278 ~f~~~~---~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g 321 (348)
T PRK06147 278 LFRVRK---EFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPG 321 (348)
T ss_pred Hhhhcc---CCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCC
Confidence 998643 22468999999999999999999999999999999985
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=290.39 Aligned_cols=176 Identities=35% Similarity=0.603 Sum_probs=149.7
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~----~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++||||||+||||+.++++|+++|+++|++++|+. ..++..+++++.|.+|.+++||++|+++++++++++.+++|
T Consensus 1 gtylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 1 GTYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 68999999999999999999999999999999993 23567888999999999999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+|+||||+||... +.++.+++.++++.++.+|+.|+++|+++ +...+++|||+|||+++++|++||++|+++
T Consensus 81 ~i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~-------~~~~~l~~~i~~SSis~~~G~~gq~~YaaA 152 (181)
T PF08659_consen 81 PIDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEA-------LENRPLDFFILFSSISSLLGGPGQSAYAAA 152 (181)
T ss_dssp -EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHH-------HTTTTTSEEEEEEEHHHHTT-TTBHHHHHH
T ss_pred Ccceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHH-------hhcCCCCeEEEECChhHhccCcchHhHHHH
Confidence 9999999999998 89999999999999999999999999999 455789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
|+|||+|++++++.|. ++++|+||+|++
T Consensus 153 N~~lda~a~~~~~~g~------~~~sI~wg~W~~ 180 (181)
T PF08659_consen 153 NAFLDALARQRRSRGL------PAVSINWGAWDG 180 (181)
T ss_dssp HHHHHHHHHHHHHTTS------EEEEEEE-EBSS
T ss_pred HHHHHHHHHHHHhCCC------CEEEEEccccCC
Confidence 9999999999999876 899999999986
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=291.98 Aligned_cols=435 Identities=12% Similarity=0.069 Sum_probs=289.2
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----cC--CCccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----PN--DTVHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----~~--~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
+++.+||.....+++.+++++|.+++. |+.+... ..... .. .-..+.++-.+++++.++++.+.+..+.+|.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRN-VERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 457899999999999999999988875 5444322 11111 01 1123788899999999999999999889999
Q ss_pred EEEeCCCCCc-------ccc--------cChHHHHHHHHHHHhC----CCCceEEEEEccccccc-CCccchhhhHHHHH
Q psy616 100 VFYLWPLEDK-------NCI--------YNIMPIIYFLQAVKKS----KLYLRKLIISGISINKK-NEEDLYYCYFNSWV 159 (1152)
Q Consensus 100 iv~lw~~~~~-------~~~--------~~~~~l~~l~qal~~~----~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~ 159 (1152)
+||.++.... ... -++.+.+.++|++... +...++++++....... .....+.....++.
T Consensus 83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~ 162 (520)
T PRK06484 83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVI 162 (520)
T ss_pred EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHH
Confidence 9999875210 011 1345667777775432 22225555554322221 12233455557788
Q ss_pred HHHHHHHHHcCCCcEEEEEecCccC---c-------------------------chHHHHHHHHHHhCCC----CceEEE
Q psy616 160 AFERSLHIIMPETQISIVFAEKITN---F-------------------------NIKNWINILFKELQEP----KLFSIM 207 (1152)
Q Consensus 160 g~~r~~~~e~p~~~~~~vd~~~~~~---~-------------------------~~~~~~~~l~~el~~~----~~~~va 207 (1152)
+|.|+++.|++...+++..+.+..- . ..++.+. .+..+... -...+.
T Consensus 163 ~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~-~v~~l~~~~~~~~~G~~~ 241 (520)
T PRK06484 163 SLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAE-AVFFLASDQASYITGSTL 241 (520)
T ss_pred HHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHH-HHHHHhCccccCccCceE
Confidence 9999999999766666655553310 0 0111111 11122111 011233
Q ss_pred EEcCceEEEEeEeEecccccccCccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCc
Q psy616 208 YYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNK 286 (1152)
Q Consensus 208 ~r~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~ 286 (1152)
..+++..++.....+....+. ......++++|||||++|||+++|++|+++|+ +|++++|+. ..+++. +..+.+
T Consensus 242 ~~~gg~~~~~~~~~~~~~~~~-~~~~~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~---~~~~~~ 316 (520)
T PRK06484 242 VVDGGWTVYGGSGPASTAQAP-SPLAESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLA---EALGDE 316 (520)
T ss_pred EecCCeeccccccCCCCccCC-CCcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH---HHhCCc
Confidence 333322222221111111221 23456889999999999999999999999998 566666653 222222 233667
Q ss_pred EEEEEecCCCHHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCC
Q psy616 287 AIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN 366 (1152)
Q Consensus 287 v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~ 366 (1152)
+.++.+|++|+++++++++++.+++|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|.
T Consensus 317 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----- 391 (520)
T PRK06484 317 HLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS----- 391 (520)
T ss_pred eeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc-----
Confidence 888999999999999999999999999999999999864245788899999999999999999999999999972
Q ss_pred CCCEEEEecCCccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc----cchhHHh
Q psy616 367 KLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----QTDFYFK 442 (1152)
Q Consensus 367 ~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~~~~~~~ 442 (1152)
..++||++||.++..+.++++.|+++|+++++|++.++.+.. ..++++.+|.+|.+.. .|...... ......+
T Consensus 392 ~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~vn~v~PG~v~t-~~~~~~~~~~~~~~~~~~~ 468 (520)
T PRK06484 392 QGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWA--PAGIRVNTVAPGYIET-PAVLALKASGRADFDSIRR 468 (520)
T ss_pred cCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhh--hhCeEEEEEEeCCccC-chhhhhccccHHHHHHHHh
Confidence 246899999999999999999999999999999999988754 3467899999887753 34321110 0111111
Q ss_pred hcCC-CCCCHHHHHHHHHHHHhcCc----eeeeeechhh
Q psy616 443 SSKQ-KVLHENDGLKLFEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 443 ~~g~-~~l~~~e~~~~l~~~l~~~~----~~~~v~~~~~ 476 (1152)
...+ +..++++..+.+..++.... .+.+.+++.+
T Consensus 469 ~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~ 507 (520)
T PRK06484 469 RIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGGW 507 (520)
T ss_pred cCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 1122 23589999999888775432 2444455443
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=257.80 Aligned_cols=224 Identities=16% Similarity=0.178 Sum_probs=191.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++|||+++|||.++|+.|++.|+ +|++.+|+ +.++++..++.+ .++.++..||+|.+++.++++.+.++||+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence 468999999999999999999999999 55555555 556777777654 67999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||+.. ..++.+.+.++|++++++|+.|.++..++++|.|.+. +.+.||++||++|....+|.+.|+++|
T Consensus 82 iDiLvNNAGl~~-g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r---~~G~IiN~~SiAG~~~y~~~~vY~ATK 157 (246)
T COG4221 82 IDILVNNAGLAL-GDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER---KSGHIINLGSIAGRYPYPGGAVYGATK 157 (246)
T ss_pred ccEEEecCCCCc-CChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc---CCceEEEeccccccccCCCCccchhhH
Confidence 999999999998 6899999999999999999999999999999998764 345799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhh--cCCCCCCHHHHHHHHHHHHhcCce
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS--SKQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~--~g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
+|+.+|++.+|++.. +.++++.+|.+|+..++-+..-........+.. .+..++.|++.++.+.+++.+|..
T Consensus 158 ~aV~~fs~~LR~e~~--g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 158 AAVRAFSLGLRQELA--GTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred HHHHHHHHHHHHHhc--CCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence 999999999999865 678899999999996653322222212222333 577889999999999999988754
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=268.48 Aligned_cols=247 Identities=28% Similarity=0.436 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC-CCCcccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL-KGPVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l-~GPs~tvdtaCs 796 (1152)
++.++.+++.+||+++|+++++++ ++++|+..+++. ....+.+|++.+|+ ++|+++|+++|+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~----~li~~~~~~~~~-------------~~~~a~~i~~~lg~~~~~~~~i~~~C~ 69 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV----GVIVGTTGGSGE-------------FSGAAGQLAYHLGISGGPAYSVNQACA 69 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce----EEEEEECCCCcc-------------ccHHHHHHHHHhCCCCCCcceeccHhH
Confidence 678899999999999999877655 899998765431 24568999999999 999999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||++|++.|++|++|.+||+|++. +++|||++++||++.+++.++
T Consensus 70 s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------------~~~gdGAaa~vL~~~~~a~~~ 118 (254)
T cd00327 70 TGLTALALAVQQVQNGKADIVLAGGSEE-------------------------------FVFGDGAAAAVVESEEHALRR 118 (254)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEecce-------------------------------eeecceEEEEEECcHHHHHHC
Confidence 9999999999999999999999999997 789999999999999999999
Q ss_pred CCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCC
Q psy616 877 GDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQ 956 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~ 956 (1152)
++++++.|.++...+++.... ..+......++++++|+++|++++||+|++.|+++++..|.+|.+.....++..
T Consensus 119 ~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~---- 193 (254)
T cd00327 119 GAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVR---- 193 (254)
T ss_pred CCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCC----
Confidence 999999999999888876533 467788999999999999999999999999999999999999988876655432
Q ss_pred CceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCc
Q psy616 957 KFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAF 1036 (1152)
Q Consensus 957 ~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sf 1036 (1152)
.+++.+.|.++||+.+|+|+..+.+++.+++++.+||. ..+.+..++++|
T Consensus 194 -~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~~ 243 (254)
T cd00327 194 -SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT-----------------------------PREPRTVLLLGF 243 (254)
T ss_pred -CCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC-----------------------------CCCcCEEEEeeE
Confidence 26789999999999999999999999999999999981 012356789999
Q ss_pred CCCcceEEEEE
Q psy616 1037 GMSGTNAHIVL 1047 (1152)
Q Consensus 1037 G~gG~nah~il 1047 (1152)
|+||+++++||
T Consensus 244 g~Gg~~~~~~l 254 (254)
T cd00327 244 GLGGTNAAVVL 254 (254)
T ss_pred cCCCcceEEEC
Confidence 99999999986
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=293.10 Aligned_cols=294 Identities=21% Similarity=0.322 Sum_probs=238.2
Q ss_pred CccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch----HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHH
Q psy616 230 NSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN----SIIYKKLKKFNNKAIYIQVDVSDKLKMISEIN 305 (1152)
Q Consensus 230 ~~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~----~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~ 305 (1152)
+....+.++|+|+||.||.|+++|.||..+|++.+||.+|+... ....+..+..|.+|.+-..||+.....+.+++
T Consensus 1762 rt~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~ 1841 (2376)
T KOG1202|consen 1762 RTYCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIE 1841 (2376)
T ss_pred hhhcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHH
Confidence 45567899999999999999999999999999999999999654 34566778889999999999999999999998
Q ss_pred HHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC
Q psy616 306 SIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 385 (1152)
Q Consensus 306 ~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g 385 (1152)
+. .+.|++.||||.|.+.+ ++.+++.+++.|+.+-++|+.|+.+|++....+. ..+++||.|||++.-.|+.|
T Consensus 1842 ~s-~kl~~vGGiFnLA~VLR-D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C-----~~LdyFv~FSSvscGRGN~G 1914 (2376)
T KOG1202|consen 1842 ES-NKLGPVGGIFNLAAVLR-DGLIENQTPKNFKDVAKPKYSGTINLDRVSREIC-----PELDYFVVFSSVSCGRGNAG 1914 (2376)
T ss_pred Hh-hhcccccchhhHHHHHH-hhhhcccChhHHHhhhccceeeeeehhhhhhhhC-----cccceEEEEEeecccCCCCc
Confidence 86 45799999999999999 9999999999999999999999999999965542 26899999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|++|+-||++|+.++++|+..|. |.++|.||+..++|.........+... .|-.|..-..-++.++..|.++
T Consensus 1915 QtNYG~aNS~MERiceqRr~~Gf------PG~AiQWGAIGDvGlilEnmgdNdTvv--gGTLPQRM~SCLetlDlFL~qp 1986 (2376)
T KOG1202|consen 1915 QTNYGLANSAMERICEQRRHEGF------PGTAIQWGAIGDVGLILENMGDNDTVV--GGTLPQRMPSCLETLDLFLQQP 1986 (2376)
T ss_pred ccccchhhHHHHHHHHHhhhcCC------CcceeeeecccceeeeeeecCCCCcee--ccccchhHHHHHHHHHHHhcCC
Confidence 99999999999999999999987 899999999999997654433222111 2333444445677777777776
Q ss_pred ceeeeeechhhhHHHHHHhhcCcCccccccccccchhHHHHHHHHHHHHHHhCC-CCcccccCCCccccCCchHHHHHHH
Q psy616 466 KIQYLVLSGELEKLNQIINNIAPKVSENKKINNFNIEKFIENDIKNHICNILNT-KKSEIYKNKNLADYGFDSISLAEFS 544 (1152)
Q Consensus 466 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~L~~-~~~~i~~~~~f~elGlDSL~aveL~ 544 (1152)
.+.+. ..-. .... +.. +.-...|.+.|+.+||+ +...++.+.+|+|||+||||.+|++
T Consensus 1987 Hpvvs--S~v~-------AEk~-------~~d-----~~~~~dLiatiA~IlGlrD~~~vn~~asLaDLGlDSLMsvEik 2045 (2376)
T KOG1202|consen 1987 HPVVS--SFVV-------AEKR-------KAD-----QDSGRDLIATIAHILGLRDLKAVNDDASLADLGLDSLMSVEIK 2045 (2376)
T ss_pred chHHH--HHHH-------HHhh-------ccc-----ccccccHHHHHHHHhcchhHhhccCCCchhhccchhhhhHHHH
Confidence 55221 0000 0000 000 11122477889999998 7778999999999999999999999
Q ss_pred HHHHHhcCcccCcee
Q psy616 545 RILSKFYSLDIMPSI 559 (1152)
Q Consensus 545 ~~l~~~fgv~L~~~~ 559 (1152)
..|+++|++-|+..+
T Consensus 2046 QtLER~~dlVLS~qE 2060 (2376)
T KOG1202|consen 2046 QTLEREFDLVLSAQE 2060 (2376)
T ss_pred HHHhhhhceeeeHHH
Confidence 999999998887655
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=241.55 Aligned_cols=226 Identities=16% Similarity=0.170 Sum_probs=191.4
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
-+++++|||||++|||+++|.++|++|+..++..-.....+++.+++++.| +++++.||++|.+++.++.+++++++|+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 368999999999999999999999999955555555667788888888876 9999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||+.. ...+.+.+.+++++.+++|+.|.++..++|+|.|.+. +.++||+++|++|.+|.+|..+||++|
T Consensus 115 V~ILVNNAGI~~-~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~---~~GHIV~IaS~aG~~g~~gl~~YcaSK 190 (300)
T KOG1201|consen 115 VDILVNNAGIVT-GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN---NNGHIVTIASVAGLFGPAGLADYCASK 190 (300)
T ss_pred ceEEEecccccc-CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc---CCceEEEehhhhcccCCccchhhhhhH
Confidence 999999999998 7889999999999999999999999999999998754 557899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccC-CCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeeee
Q psy616 394 RFQTVYAKYLNNKNIYKK-YTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLV 471 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~-~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~v 471 (1152)
+++.+|.+.+..+-...+ .+++++.+.+...+ +||-.. ..... .-...|+|++.++.+.+.+..+.....+
T Consensus 191 ~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~-Tgmf~~-~~~~~-----~l~P~L~p~~va~~Iv~ai~~n~~~~~~ 262 (300)
T KOG1201|consen 191 FAAVGFHESLSMELRALGKDGIKTTLVCPYFIN-TGMFDG-ATPFP-----TLAPLLEPEYVAKRIVEAILTNQAGLLI 262 (300)
T ss_pred HHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc-ccccCC-CCCCc-----cccCCCCHHHHHHHHHHHHHcCCccccc
Confidence 999999888776544333 34788888887776 888654 11111 1234689999999999888877665443
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-27 Score=232.80 Aligned_cols=118 Identities=43% Similarity=0.688 Sum_probs=101.3
Q ss_pred EEEEEEEEEecCC-CCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCce
Q psy616 881 HAIIRGSGINYDG-KTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFC 959 (1152)
Q Consensus 881 ~avI~g~a~~~dG-~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~ 959 (1152)
||+|+|+++++|| ++.+++.|++.+++++|++||+++|++|+||+|||+|||||+.+|++|+++|.++|+.... .++|
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~-~~~~ 79 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSAR-QQPV 79 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGG-TSTS
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhccccc-cccc
Confidence 7999999999999 8889999999999999999999999999999999999999999999999999999997653 4569
Q ss_pred eeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCC
Q psy616 960 AITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 999 (1152)
Q Consensus 960 ~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~ 999 (1152)
+|+|+|+++||+++|||+++|+|++++|++++|||++||+
T Consensus 80 ~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 80 PVGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EEE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred ceeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 9999999999999999999999999999999999999985
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-25 Score=241.12 Aligned_cols=229 Identities=19% Similarity=0.183 Sum_probs=195.5
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
..++++||||+++|||.++|+.|+++|. +|||++|+ +.++++.++|+.. +.++.++++|+++++++.++.+++.++.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 4678999999999999999999999988 56666665 6678888888754 6889999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
++||++|||||... .+++.+.+.++.++++++|+.++..|.++++|.|.+. ..+.||+++|.+|+.+.|..+.|+|
T Consensus 83 ~~IdvLVNNAG~g~-~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~---~~G~IiNI~S~ag~~p~p~~avY~A 158 (265)
T COG0300 83 GPIDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER---GAGHIINIGSAAGLIPTPYMAVYSA 158 (265)
T ss_pred CcccEEEECCCcCC-ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCceEEEEechhhcCCCcchHHHHH
Confidence 99999999999988 8899999999999999999999999999999998763 4567999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeeee
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLV 471 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~v 471 (1152)
+|+|+.+|++.++.+.. +.++++.++++|+....... . ..........+...|++++..+.....+..+...+++
T Consensus 159 TKa~v~~fSeaL~~EL~--~~gV~V~~v~PG~~~T~f~~-~--~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k~~ii~ 233 (265)
T COG0300 159 TKAFVLSFSEALREELK--GTGVKVTAVCPGPTRTEFFD-A--KGSDVYLLSPGELVLSPEDVAEAALKALEKGKREIIP 233 (265)
T ss_pred HHHHHHHHHHHHHHHhc--CCCeEEEEEecCcccccccc-c--cccccccccchhhccCHHHHHHHHHHHHhcCCceEec
Confidence 99999999999999864 67889999999988654332 1 1111122223556799999999999999888776665
Q ss_pred e
Q psy616 472 L 472 (1152)
Q Consensus 472 ~ 472 (1152)
.
T Consensus 234 ~ 234 (265)
T COG0300 234 G 234 (265)
T ss_pred C
Confidence 4
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-26 Score=224.98 Aligned_cols=229 Identities=15% Similarity=0.165 Sum_probs=183.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
..++.+||||++|||+++++.|+++|+++++...++...++....|...| .-..+.|||+++.+++.++++..+.+|++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 46889999999999999999999999988888888877677776665543 45678999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
+.||||||+.. |..+..++.++|+.++.+|+.|.+.+.|++...|... .+....||++||+.+..|+.||++|+|+|+
T Consensus 92 svlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~-~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~ 169 (256)
T KOG1200|consen 92 SVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMN-QQQGLSIINVSSIVGKIGNFGQTNYAASKG 169 (256)
T ss_pred cEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHh-cCCCceEEeehhhhcccccccchhhhhhcC
Confidence 99999999999 9999999999999999999999999999999886533 334458999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcCCCCC-CHHHHHHHHHHHHhcCceeee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQKVL-HENDGLKLFEQLLIQDKIQYL 470 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~~~l-~~~e~~~~l~~~l~~~~~~~~ 470 (1152)
++.+|++...++.. ..++++.++.+|.+. +.|.....+. .+.......+..+ .+||.+.+...+ .++...++
T Consensus 170 GvIgftktaArEla--~knIrvN~VlPGFI~-tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fL-AS~~ssYi 243 (256)
T KOG1200|consen 170 GVIGFTKTAARELA--RKNIRVNVVLPGFIA-TPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFL-ASDASSYI 243 (256)
T ss_pred ceeeeeHHHHHHHh--hcCceEeEecccccc-ChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHH-hccccccc
Confidence 99999999888876 456688888887775 4554433322 2222222233333 456666666554 45544443
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=244.25 Aligned_cols=187 Identities=18% Similarity=0.191 Sum_probs=166.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCC-C-cEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-N-KAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g-~-~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++||||+++|||.++|..|+++|+..+++.+|....+...+++++.+ . ++++++|||+|.+++.++++++.++||
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 58999999999999999999999999988888888888888777777653 3 499999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|.+|||||+.. .....+.+.++++.+|++|+.|+..++++++|+|++.+ .|+||++||++|..+.|..+.|+|+
T Consensus 91 ~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~---~GhIVvisSiaG~~~~P~~~~Y~AS 166 (282)
T KOG1205|consen 91 RVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN---DGHIVVISSIAGKMPLPFRSIYSAS 166 (282)
T ss_pred CCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC---CCeEEEEeccccccCCCcccccchH
Confidence 9999999999988 77888899999999999999999999999999997643 5789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
|++|.+|.+.+|.+....+..+.. +|.+|+.+.
T Consensus 167 K~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~T 199 (282)
T KOG1205|consen 167 KHALEGFFETLRQELIPLGTIIII-LVSPGPIET 199 (282)
T ss_pred HHHHHHHHHHHHHHhhccCceEEE-EEecCceee
Confidence 999999999999987633333444 788887753
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-24 Score=254.92 Aligned_cols=387 Identities=11% Similarity=0.079 Sum_probs=244.9
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCcEEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC-
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP- 105 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~- 105 (1152)
-.++||+.++ .+++.++++.|+..+.-++....... ..+|.. ...++.+++-+.
T Consensus 38 ~~~~~l~~~~-~g~~~~~~~~~~~~g~~v~~~~~~~~----------~~~~~~--------------~~~~~~~~~d~~~ 92 (450)
T PRK08261 38 LDGPVLVGGA-GRLAEALAALLAGLGYDVVANNDGGL----------TWAAGW--------------GDRFGALVFDATG 92 (450)
T ss_pred CCCceEEccC-chhHHHHHHHHhhCCCeeeecCcccc----------ccccCc--------------CCcccEEEEECCC
Confidence 3566777665 79999999999887654443332111 111111 123444444222
Q ss_pred CCCcccccChHHHHHHHHHHHhC-CCCceEEEEEcccccccCCccchhhhHHHHHHHHHHHHHHcC-CCcEEEEEecCcc
Q psy616 106 LEDKNCIYNIMPIIYFLQAVKKS-KLYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSLHIIMP-ETQISIVFAEKIT 183 (1152)
Q Consensus 106 ~~~~~~~~~~~~l~~l~qal~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~r~~~~e~p-~~~~~~vd~~~~~ 183 (1152)
+.. .+.+..++.++++.... ....++++++.. ... ...+.+.+...+++||.|++++|++ ++++..|+.++..
T Consensus 93 ~~~---~~~l~~~~~~~~~~l~~l~~~griv~i~s~-~~~-~~~~~~~~akaal~gl~rsla~E~~~gi~v~~i~~~~~~ 167 (450)
T PRK08261 93 ITD---PADLKALYEFFHPVLRSLAPCGRVVVLGRP-PEA-AADPAAAAAQRALEGFTRSLGKELRRGATAQLVYVAPGA 167 (450)
T ss_pred CCC---HHHHHHHHHHHHHHHHhccCCCEEEEEccc-ccc-CCchHHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCCCC
Confidence 111 22334445555553322 222344444332 111 1233455566789999999999997 4777778776533
Q ss_pred CcchHHHHHHHHHHhCCCCceEEEEEcCceEEEEeEeEecccccccCccccCCCEEEEECCchhHHHHHHHHHHHcCCcE
Q psy616 184 NFNIKNWINILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTN 263 (1152)
Q Consensus 184 ~~~~~~~~~~l~~el~~~~~~~va~r~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~ 263 (1152)
. ++. ...+..+.... -+|..|. ...........+... ....++++||||||+||||+++|++|+++|++
T Consensus 168 ~---~~~-~~~~~~l~s~~---~a~~~g~--~i~~~~~~~~~~~~~-~~~~~g~~vlItGasggIG~~la~~l~~~Ga~- 236 (450)
T PRK08261 168 E---AGL-ESTLRFFLSPR---SAYVSGQ--VVRVGAADAAPPADW-DRPLAGKVALVTGAARGIGAAIAEVLARDGAH- 236 (450)
T ss_pred H---HHH-HHHHHHhcCCc---cCCccCc--EEEecCCcccCCCCc-ccCCCCCEEEEecCCCHHHHHHHHHHHHCCCE-
Confidence 2 222 22333332221 1344441 111111111111111 12346899999999999999999999999985
Q ss_pred EEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHh
Q psy616 264 LILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLS 343 (1152)
Q Consensus 264 vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~ 343 (1152)
++++.|+...+...+..+..+ ..++.+|++|.++++++++.+.+++|++|+||||||+.. +..+.+++.++|+.+++
T Consensus 237 vi~~~~~~~~~~l~~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~-~~~~~~~~~~~~~~~~~ 313 (450)
T PRK08261 237 VVCLDVPAAGEALAAVANRVG--GTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITR-DKTLANMDEARWDSVLA 313 (450)
T ss_pred EEEEeCCccHHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHH
Confidence 555555433333332223333 357889999999999999999999999999999999987 78889999999999999
Q ss_pred hhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCc
Q psy616 344 SKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPL 423 (1152)
Q Consensus 344 ~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~ 423 (1152)
+|+.|++++++++.+.+.. .+.++||++||+++..|.+++.+|+++|+++++|++.++.+.. ..++++.+|.||.
T Consensus 314 ~n~~g~~~l~~~~~~~~~~---~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~la~el~--~~gi~v~~v~PG~ 388 (450)
T PRK08261 314 VNLLAPLRITEALLAAGAL---GDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLA--ERGITINAVAPGF 388 (450)
T ss_pred HHhHHHHHHHHHHHHhhhh---cCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHHHHHHh--hhCcEEEEEEeCc
Confidence 9999999999999886432 2357899999999999999999999999998888887766532 3456889999998
Q ss_pred ccCccccccccccchhHHhh-cCC-CCCCHHHHHHHHHHHHh
Q psy616 424 WNNSKFKIGNNEQTDFYFKS-SKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 424 w~~~Gm~~~~~~~~~~~~~~-~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
+. +.|............+. ..+ ..-.+++..+.+..++.
T Consensus 389 i~-t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s 429 (450)
T PRK08261 389 IE-TQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLAS 429 (450)
T ss_pred Cc-chhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhC
Confidence 75 45543211111111111 011 12467888888887764
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-23 Score=236.08 Aligned_cols=234 Identities=12% Similarity=0.082 Sum_probs=183.2
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC---------cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEI 304 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~---------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~ 304 (1152)
-+++++|||||++|||+++|+.|+++|++++++..+. +..++..++++..+.++.++.+|++|++++++++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3579999999999999999999999998665554333 3334556667777888999999999999999999
Q ss_pred HHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcC---CCCCEEEEecCCcccc
Q psy616 305 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK---NKLDFVCYFSSSSAIL 381 (1152)
Q Consensus 305 ~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~---~~~~~iV~~SS~a~~~ 381 (1152)
+++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++... ...++||++||+++..
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 999999999999999999987 678889999999999999999999999999999875321 1236899999999999
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhh--cC-CCCCCHHHHHHHH
Q psy616 382 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS--SK-QKVLHENDGLKLF 458 (1152)
Q Consensus 382 g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~--~g-~~~l~~~e~~~~l 458 (1152)
+.++++.|+++|+++++|++.++.+.. ..++++.+|.+| . .+.|..... ...... .+ +...+|++..+.+
T Consensus 163 ~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~v~Pg-~-~T~~~~~~~---~~~~~~~~~~~~~~~~pedva~~~ 235 (286)
T PRK07791 163 GSVGQGNYSAAKAGIAALTLVAAAELG--RYGVTVNAIAPA-A-RTRMTETVF---AEMMAKPEEGEFDAMAPENVSPLV 235 (286)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHH--HhCeEEEEECCC-C-CCCcchhhH---HHHHhcCcccccCCCCHHHHHHHH
Confidence 999999999999999999999887643 345688899887 3 455532110 111111 11 2346899999999
Q ss_pred HHHHhcC----ceeeeeechh
Q psy616 459 EQLLIQD----KIQYLVLSGE 475 (1152)
Q Consensus 459 ~~~l~~~----~~~~~v~~~~ 475 (1152)
..++... ..+.+.+++.
T Consensus 236 ~~L~s~~~~~itG~~i~vdgG 256 (286)
T PRK07791 236 VWLGSAESRDVTGKVFEVEGG 256 (286)
T ss_pred HHHhCchhcCCCCcEEEEcCC
Confidence 8877542 2244555544
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=232.92 Aligned_cols=229 Identities=13% Similarity=0.127 Sum_probs=184.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|++|+++|++ |+++.|+ +..++..+++++.|.++.++.+|++|.++++++++++.+.+|+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~-Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGAR-LVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999985 6666666 3445666777777889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||+.. ...+.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+.+..+.++++.|+++|
T Consensus 85 iD~lVnnAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~---~~g~iV~isS~~~~~~~p~~~~Y~asK 160 (330)
T PRK06139 85 IDVWVNNVGVGA-VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ---GHGIFINMISLGGFAAQPYAAAYSASK 160 (330)
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc---CCCEEEEEcChhhcCCCCCchhHHHHH
Confidence 999999999987 6788999999999999999999999999999998653 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeeee
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLV 471 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~v 471 (1152)
+++.+|++.++.+.. ...++++.+|.+|.....+.. .......... ......+++++..+.+..++..+...+.+
T Consensus 161 aal~~~~~sL~~El~-~~~gI~V~~v~Pg~v~T~~~~-~~~~~~~~~~-~~~~~~~~pe~vA~~il~~~~~~~~~~~~ 235 (330)
T PRK06139 161 FGLRGFSEALRGELA-DHPDIHVCDVYPAFMDTPGFR-HGANYTGRRL-TPPPPVYDPRRVAKAVVRLADRPRATTTV 235 (330)
T ss_pred HHHHHHHHHHHHHhC-CCCCeEEEEEecCCccCcccc-cccccccccc-cCCCCCCCHHHHHHHHHHHHhCCCCEEEc
Confidence 999999999988743 223678888987766543321 1111000000 11223578999999999998877654443
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9e-23 Score=226.37 Aligned_cols=222 Identities=15% Similarity=0.131 Sum_probs=178.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+.. ++..++++..+.++.++.+|++|+++++++++++.+.+|++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~-vv~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGAD-IVGVGVAEA-PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCchH-HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999999985 555566542 44555666677889999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+.+.++|++++++|+.|++.+.+++.|.|++. ...++||++||+++..+.++...|+++|+
T Consensus 85 D~lv~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--~~~g~ii~isS~~~~~~~~~~~~Y~asK~ 161 (251)
T PRK12481 85 DILINNAGIIR-RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ--GNGGKIINIASMLSFQGGIRVPSYTASKS 161 (251)
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc--CCCCEEEEeCChhhcCCCCCCcchHHHHH
Confidence 99999999877 6778889999999999999999999999999998642 23468999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++|++.++.+.. ..++++.+|.+|... +.|....... ......... -+..+|+|...++..++..
T Consensus 162 a~~~l~~~la~e~~--~~girvn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~ 232 (251)
T PRK12481 162 AVMGLTRALATELS--QYNINVNAIAPGYMA-TDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSS 232 (251)
T ss_pred HHHHHHHHHHHHHh--hcCeEEEEEecCCCc-cCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999988754 346788899888775 4443221110 111111111 1346899999999888754
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=217.47 Aligned_cols=163 Identities=23% Similarity=0.291 Sum_probs=152.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC---cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~---~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
|++|||||++|||++++++|+++|+.+|++++|+ +..+++.++++..+.++.+++||++++++++++++++.+++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6899999999999999999999999999999998 4445667778888899999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. .+.+.+++.++|++++++|+.+++++.+++.| .+.+.||++||+++..|.+++..|+++|
T Consensus 81 ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-------~~~g~iv~~sS~~~~~~~~~~~~Y~ask 152 (167)
T PF00106_consen 81 LDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP-------QGGGKIVNISSIAGVRGSPGMSAYSASK 152 (167)
T ss_dssp ESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-------HTTEEEEEEEEGGGTSSSTTBHHHHHHH
T ss_pred cccccccccccc-ccccccccchhhhhccccccceeeeeeehhee-------ccccceEEecchhhccCCCCChhHHHHH
Confidence 999999999998 88999999999999999999999999999988 2467899999999999999999999999
Q ss_pred HHHHHHHHHHHhcc
Q psy616 394 RFQTVYAKYLNNKN 407 (1152)
Q Consensus 394 a~l~~la~~~~~~g 407 (1152)
+++++|++.+++++
T Consensus 153 aal~~~~~~la~e~ 166 (167)
T PF00106_consen 153 AALRGLTQSLAAEL 166 (167)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998874
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=228.61 Aligned_cols=228 Identities=14% Similarity=0.129 Sum_probs=181.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|++|+++|++ |+++.|+ +..++..++++..+.++.+++||++|.+++.++++++.+++|+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999985 5555555 4445566677777788999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. .+.+.+.+.++|++++++|+.|++++.++++|.|.+. ...+.||++||+++..+.++++.|+++|
T Consensus 84 id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asK 160 (275)
T PRK05876 84 VDVVFSNAGIVV-GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQ--GTGGHVVFTASFAGLVPNAGLGAYGVAK 160 (275)
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCCCEEEEeCChhhccCCCCCchHHHHH
Confidence 999999999976 6788899999999999999999999999999998643 2246899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch--h-------HHh--hcCCCCCCHHHHHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD--F-------YFK--SSKQKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~--~-------~~~--~~g~~~l~~~e~~~~l~~~l 462 (1152)
+++.+|++.++.+.. ..++++.+|.+|.. +++|......... . ... ......+++++..+.+...+
T Consensus 161 ~a~~~~~~~l~~e~~--~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai 237 (275)
T PRK05876 161 YGVVGLAETLAREVT--ADGIGVSVLCPMVV-ETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAI 237 (275)
T ss_pred HHHHHHHHHHHHHhh--hcCcEEEEEEeCcc-ccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHH
Confidence 999999999987653 34568888876655 4555322110000 0 000 00113578999999999999
Q ss_pred hcCceee
Q psy616 463 IQDKIQY 469 (1152)
Q Consensus 463 ~~~~~~~ 469 (1152)
..+...+
T Consensus 238 ~~~~~~~ 244 (275)
T PRK05876 238 LANRLYV 244 (275)
T ss_pred HcCCeEE
Confidence 8776433
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=225.23 Aligned_cols=232 Identities=12% Similarity=0.038 Sum_probs=175.5
Q ss_pred CCCEEEEECCch--hHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~g--GIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||++ |||+++|+.|+++|++ |++.+|+....+..+++. +.|. ..+++||++|.++++++++++.+++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAE-LAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCE-EEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 579999999997 9999999999999985 555667643333334443 3343 3578999999999999999999999
Q ss_pred CCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 312 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 312 G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
|+||++|||||+... ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.||++||+++..+.+++..
T Consensus 84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-----~G~Iv~isS~~~~~~~~~~~~ 158 (271)
T PRK06505 84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-----GGSMLTLTYGGSTRVMPNYNV 158 (271)
T ss_pred CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-----CceEEEEcCCCccccCCccch
Confidence 999999999998641 146778999999999999999999999999999852 267999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc--chhHH-hhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--TDFYF-KSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~~~~~-~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|+++.+|++.++.+.. ..++++.+|.+|.... .|....... ..... +...+ +..+|+|...++..++..
T Consensus 159 Y~asKaAl~~l~r~la~el~--~~gIrVn~v~PG~i~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~ 235 (271)
T PRK06505 159 MGVAKAALEASVRYLAADYG--PQGIRVNAISAGPVRT-LAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSD 235 (271)
T ss_pred hhhhHHHHHHHHHHHHHHHh--hcCeEEEEEecCCccc-cccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCc
Confidence 99999999999999988754 4567888999887754 443211110 00011 11111 246899999999887754
Q ss_pred Cc----eeeeeechhh
Q psy616 465 DK----IQYLVLSGEL 476 (1152)
Q Consensus 465 ~~----~~~~v~~~~~ 476 (1152)
.. .+.+.+++.+
T Consensus 236 ~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 236 LSSGVTGEIHFVDSGY 251 (271)
T ss_pred cccccCceEEeecCCc
Confidence 32 2445555543
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-22 Score=227.41 Aligned_cols=225 Identities=15% Similarity=0.177 Sum_probs=176.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|++|+++|+ +|++++|+. ..+++.+++.. +.++.+++||++|.++++++++++.+.+|+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999998 566667764 23344444432 456788889999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.+.+.|.|.+ ..++||++||+++..+.+++..|+++|
T Consensus 86 id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~~Y~asK 160 (296)
T PRK05872 86 IDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIE----RRGYVLQVSSLAAFAAAPGMAAYCASK 160 (296)
T ss_pred CCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH----cCCEEEEEeCHhhcCCCCCchHHHHHH
Confidence 999999999987 778899999999999999999999999999999864 236899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhc---CCCCCCHHHHHHHHHHHHhcCce
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSS---KQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~---g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
+++++|++.++.+.. ..++++.+|.+| |-++.|....... ........ ....+++++..+.+..++.....
T Consensus 161 aal~~~~~~l~~e~~--~~gi~v~~v~Pg-~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~ 237 (296)
T PRK05872 161 AGVEAFANALRLEVA--HHGVTVGSAYLS-WIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRAR 237 (296)
T ss_pred HHHHHHHHHHHHHHH--HHCcEEEEEecC-cccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCC
Confidence 999999999887543 234566677555 4456664322111 01111111 12457899999999998876654
Q ss_pred ee
Q psy616 468 QY 469 (1152)
Q Consensus 468 ~~ 469 (1152)
.+
T Consensus 238 ~i 239 (296)
T PRK05872 238 RV 239 (296)
T ss_pred EE
Confidence 44
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.9e-22 Score=220.58 Aligned_cols=223 Identities=12% Similarity=-0.005 Sum_probs=171.8
Q ss_pred CCCEEEEECC--chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg--~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++||||| ++|||+++|+.|+++|++ |++.+|.+..++..+++.........++||++|+++++++++++.+++|
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAE-LAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5789999997 679999999999999985 5556665444455555654433456789999999999999999999999
Q ss_pred CeeEEEEcccccCcC----cccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 313 PIDGVLHIAGISGLT----SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~----~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
+||++|||||+.... ..+.+.+.++|++++++|+.+++++.+++.|+|++ . .+.||++||+++..+.++...
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~---~-~g~Iv~iss~~~~~~~~~~~~ 159 (261)
T PRK08690 84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG---R-NSAIVALSYLGAVRAIPNYNV 159 (261)
T ss_pred CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh---c-CcEEEEEcccccccCCCCccc
Confidence 999999999986511 12456788999999999999999999999998753 1 267999999999989999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc--c-chhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--Q-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|...... . .....+...+ +..+|+|..+.+..++..
T Consensus 160 Y~asKaal~~l~~~la~e~~--~~gIrVn~i~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~ 236 (261)
T PRK08690 160 MGMAKASLEAGIRFTAACLG--KEGIRCNGISAGPIK-TLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSD 236 (261)
T ss_pred chhHHHHHHHHHHHHHHHhh--hcCeEEEEEecCccc-chhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999887654 446789999988775 445322111 1 1111122222 346899999999988864
Q ss_pred C
Q psy616 465 D 465 (1152)
Q Consensus 465 ~ 465 (1152)
.
T Consensus 237 ~ 237 (261)
T PRK08690 237 L 237 (261)
T ss_pred c
Confidence 3
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.4e-22 Score=225.48 Aligned_cols=223 Identities=15% Similarity=0.132 Sum_probs=177.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|++|+++|+++++...++ ...++..++++..|.++.++.+|++|.+++.++++.+.+ +|+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCC
Confidence 579999999999999999999999998655443333 334566677877788999999999999999999999998 999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcC----CCCCEEEEecCCccccCCCCChhh
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK----NKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~----~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
||+||||||+.. ...+.+++.++|++++++|+.|++++.+++.++|++... ...++||++||.++..+.+++..|
T Consensus 90 iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 168 (306)
T PRK07792 90 LDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANY 168 (306)
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchH
Confidence 999999999987 677889999999999999999999999999999864321 123689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++|+++++|++.++.+.. ..++++.+|.++. .+.|.......... .......++++++...++..++..
T Consensus 169 ~asKaal~~l~~~la~e~~--~~gI~vn~i~Pg~--~t~~~~~~~~~~~~-~~~~~~~~~~pe~va~~v~~L~s~ 238 (306)
T PRK07792 169 GAAKAGITALTLSAARALG--RYGVRANAICPRA--RTAMTADVFGDAPD-VEAGGIDPLSPEHVVPLVQFLASP 238 (306)
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCeEEEEECCCC--CCchhhhhccccch-hhhhccCCCCHHHHHHHHHHHcCc
Confidence 9999999999999887643 3456888887763 45553221111010 111234568999999988877754
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-22 Score=219.36 Aligned_cols=234 Identities=14% Similarity=0.151 Sum_probs=180.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|+ +|++++|+ +..++..++++..+.++..+.+|++|+++++++++++.+.+|+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 479999999999999999999999998 46666666 3345566667777778889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-C-CChhhhH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F-GSCDYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-~-g~~~Yaa 391 (1152)
+|+||||||... ..++.+.+.++|++++++|+.|++++.+++.|.|.+. ...+.||++||+++..+. + +...|++
T Consensus 87 id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~~~Y~a 163 (253)
T PRK05867 87 IDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ--GQGGVIINTASMSGHIINVPQQVSHYCA 163 (253)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhc--CCCcEEEEECcHHhcCCCCCCCccchHH
Confidence 999999999876 6678889999999999999999999999999998643 224679999999887543 3 4578999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcC-CCCCCHHHHHHHHHHHHhcCc----
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQDK---- 466 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~~---- 466 (1152)
+|+++++|++.++.+.. ..++++.+|.+|... +.|............+... -+..+|+|..+++..++....
T Consensus 164 sKaal~~~~~~la~e~~--~~gI~vn~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~t 240 (253)
T PRK05867 164 SKAAVIHLTKAMAVELA--PHKIRVNSVSPGYIL-TELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMT 240 (253)
T ss_pred HHHHHHHHHHHHHHHHh--HhCeEEEEeecCCCC-CcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcC
Confidence 99999999999987644 345688899888774 4443221111111111111 135689999999998876432
Q ss_pred eeeeeechh
Q psy616 467 IQYLVLSGE 475 (1152)
Q Consensus 467 ~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 241 G~~i~vdgG 249 (253)
T PRK05867 241 GSDIVIDGG 249 (253)
T ss_pred CCeEEECCC
Confidence 244555554
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-22 Score=220.11 Aligned_cols=220 Identities=11% Similarity=0.043 Sum_probs=173.1
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.+|++|||||+ +|||+++|+.|+++|++ |++.+|+...++..+++. +.++.+++||++|+++++++++++.+++|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~-Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGAT-VIYTYQNDRMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEecCchHHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 57999999999 89999999999999985 566677643333333332 34688999999999999999999999999
Q ss_pred CeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 313 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
++|++|||||+... ..++.+.+.++|++++++|+.|++.+.+++.|+|++ .+.||++||+++..+.++++.|
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-----~g~Iv~iss~~~~~~~~~~~~Y 157 (252)
T PRK06079 83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-----GASIVTLTYFGSERAIPNYNVM 157 (252)
T ss_pred CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-----CceEEEEeccCccccCCcchhh
Confidence 99999999998641 256788999999999999999999999999998742 2679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++|+++.+|++.++.+.. ..++++.+|.+|.+.. .|..... +..+...+... -+..+|+|..+.+..++...
T Consensus 158 ~asKaal~~l~~~la~el~--~~gI~vn~i~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~ 234 (252)
T PRK06079 158 GIAKAALESSVRYLARDLG--KKGIRVNAISAGAVKT-LAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDL 234 (252)
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCcEEEEEecCcccc-cccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcc
Confidence 9999999999999988754 3467889999988854 4432111 11111111111 24578999999999887643
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-22 Score=221.64 Aligned_cols=184 Identities=14% Similarity=0.080 Sum_probs=157.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++.. +.++.++++|++|+++++++++++. ++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGAD-VILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhC
Confidence 5789999999999999999999999985 6666665 3334455555443 5678999999999999999999986 689
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|++|||||... ...+.+.+.++|++++++|+.+++.+.++++|+|++. ..+.||++||+++..+.++...|+++
T Consensus 85 ~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~---~~g~Ii~isS~~~~~~~~~~~~y~as 160 (263)
T PRK08339 85 EPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK---GFGRIIYSTSVAIKEPIPNIALSNVV 160 (263)
T ss_pred CCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCCEEEEEcCccccCCCCcchhhHHH
Confidence 9999999999876 6778899999999999999999999999999998653 34679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
|+++.+|++.++.+.. ..++++.+|.+|....
T Consensus 161 Kaal~~l~~~la~el~--~~gIrVn~v~PG~v~T 192 (263)
T PRK08339 161 RISMAGLVRTLAKELG--PKGITVNGIMPGIIRT 192 (263)
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEEeCcCcc
Confidence 9999999999988754 4567888999887743
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.9e-22 Score=218.68 Aligned_cols=223 Identities=11% Similarity=0.091 Sum_probs=176.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|++|+++|++ |++++|+ +..+++.++++..+.++.++.||++|+++++++++++.+++|+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAK-VVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999985 6666665 3445566677777788999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-cCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-~g~~g~~~Yaaa 392 (1152)
||+||||||+.....++.+.+.++|++++++|+.+++++.++++|.|++. ..+.||++||.++. .+.+++..|+++
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~---~~~~iv~~sS~~~~~~~~~~~~~Y~~s 160 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR---GGGSLIFTSTFVGHTAGFPGMAAYAAS 160 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCceEEEEechHhhccCCCCcchhHHH
Confidence 99999999986424577889999999999999999999999999998653 34579999999887 578899999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc--cchhHHhh-cC-CCCCCHHHHHHHHHHHHhc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFKS-SK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~~-~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
|++++.|++.++.+.. ..++++.+|.+|.+. +.|...... ......+. .. -...++++..+.+..++..
T Consensus 161 K~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 233 (254)
T PRK07478 161 KAGLIGLTQVLAAEYG--AQGIRVNALLPGGTD-TPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASD 233 (254)
T ss_pred HHHHHHHHHHHHHHHh--hcCEEEEEEeeCccc-CcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999999887643 345688888887764 455332111 11111111 11 1246899999988887754
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=218.78 Aligned_cols=222 Identities=12% Similarity=0.111 Sum_probs=175.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~--~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||++|||+++|++|+++|++ |+++.|+ +..++..++++. .+.++.+++||++|++++.++++++.+.+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAA-VALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999985 5555665 334555666665 46678899999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||+.. ...+.+.+.++|++++++|+.+++++.++++|.|++. ..+.||++||.++..+.++...|++
T Consensus 85 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~ 160 (260)
T PRK07063 85 GPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER---GRGSIVNIASTHAFKIIPGCFPYPV 160 (260)
T ss_pred CCCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh---CCeEEEEECChhhccCCCCchHHHH
Confidence 99999999999876 5667788999999999999999999999999998643 3468999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-----c-c-cchhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----N-E-QTDFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----~-~-~~~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
+|+++++|++.++.+.. ..++++.+|.+|... +.|.... . . ......+...+ +..+|+|....+..++.
T Consensus 161 sKaa~~~~~~~la~el~--~~gIrvn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s 237 (260)
T PRK07063 161 AKHGLLGLTRALGIEYA--ARNVRVNAIAPGYIE-TQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLAS 237 (260)
T ss_pred HHHHHHHHHHHHHHHhC--ccCeEEEEEeeCCcc-ChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 99999999999987754 346788889887654 4443210 0 0 00111111111 24578999998888775
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 238 ~ 238 (260)
T PRK07063 238 D 238 (260)
T ss_pred c
Confidence 4
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=219.28 Aligned_cols=222 Identities=16% Similarity=0.122 Sum_probs=177.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||++|||+++|+.|+++|+ +|++++|++..++..++++..+.++.++.||++|++++.++++++.+.+|+|
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 478999999999999999999999998 5555566655566677777777789999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+......+.+.+.++|++++++|+.|++.+.++++|+|++. .++||++||.++..+.++.+.|+++|+
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~~~~~~~Y~asKa 159 (272)
T PRK08589 84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ----GGSIINTSSFSGQAADLYRSGYNAAKG 159 (272)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCEEEEeCchhhcCCCCCCchHHHHHH
Confidence 9999999986423567788999999999999999999999999998642 268999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-c---hhHHh-----hcCC-CCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-T---DFYFK-----SSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~---~~~~~-----~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+.. ..++++.+|.+|... +.|....... . ...+. ...+ +..++++..+.+..++..
T Consensus 160 al~~l~~~la~e~~--~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 236 (272)
T PRK08589 160 AVINFTKSIAIEYG--RDGIRANAIAPGTIE-TPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASD 236 (272)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEecCccc-CchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999987653 346788999988765 4443211100 0 00011 0111 235789999988887754
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=226.61 Aligned_cols=230 Identities=11% Similarity=0.055 Sum_probs=183.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|++|+++|++ |+++.|+ +..++..++++..|.++.++++|++|.++++++++.+.+++|+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~-Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAK-VVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 4689999999999999999999999985 5555665 4445666777777889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|++|||||+.. ..++.+.+.++|++++++|+.|.+++.+.++|+|++. +.+.||++||+.+..+.++++.|+++|
T Consensus 86 iD~lInnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~---~~g~iV~isS~~~~~~~~~~~~Y~asK 161 (334)
T PRK07109 86 IDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR---DRGAIIQVGSALAYRSIPLQSAYCAAK 161 (334)
T ss_pred CCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEeCChhhccCCCcchHHHHHH
Confidence 999999999876 6778899999999999999999999999999998653 347899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeeee
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLV 471 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~v 471 (1152)
+++.+|++.++.+....+.++++++|.+|.... .|.......... .........+++++.+.+..++..+...+.+
T Consensus 162 ~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T-~~~~~~~~~~~~-~~~~~~~~~~pe~vA~~i~~~~~~~~~~~~v 237 (334)
T PRK07109 162 HAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNT-PQFDWARSRLPV-EPQPVPPIYQPEVVADAILYAAEHPRRELWV 237 (334)
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccC-chhhhhhhhccc-cccCCCCCCCHHHHHHHHHHHHhCCCcEEEe
Confidence 999999999887654334567888998876643 221110000000 0011123468999999999998876544433
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.2e-22 Score=220.95 Aligned_cols=232 Identities=13% Similarity=0.032 Sum_probs=176.0
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+|++|||||+ +|||+++|+.|+++|+ +|++.+|+....+..+++. +.+.. .+++||++|.++++++++++.+++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence 47999999997 8999999999999998 5566667643333344443 33444 678999999999999999999999
Q ss_pred CCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 312 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 312 G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
|+||++|||||+... ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.||++||+++..+.+++..
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-----~g~Iv~isS~~~~~~~~~~~~ 156 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-----GASVLTLSYLGGVKYVPHYNV 156 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-----CCcEEEEecCCCccCCCcchh
Confidence 999999999998641 256788999999999999999999999999999843 257999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc--hhH-HhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT--DFY-FKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~--~~~-~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|+++.+|++.++.+.. ..++++.+|.+|.... -|........ ... ..... -+..+|+|...++..++..
T Consensus 157 Y~asKaal~~l~~~la~el~--~~gIrVn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~ 233 (274)
T PRK08415 157 MGVAKAALESSVRYLAVDLG--KKGIRVNAISAGPIKT-LAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSD 233 (274)
T ss_pred hhhHHHHHHHHHHHHHHHhh--hcCeEEEEEecCcccc-HHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhh
Confidence 99999999999999988754 4467888998886653 3322111100 000 01111 1346899999999888764
Q ss_pred C----ceeeeeechhh
Q psy616 465 D----KIQYLVLSGEL 476 (1152)
Q Consensus 465 ~----~~~~~v~~~~~ 476 (1152)
. ..+.+.+++.+
T Consensus 234 ~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 234 LSSGVTGEIHYVDAGY 249 (274)
T ss_pred hhhcccccEEEEcCcc
Confidence 3 23455555554
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=216.05 Aligned_cols=222 Identities=14% Similarity=0.135 Sum_probs=174.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++|||+++|++|+++|+++++ +.|+. ..++..++++..+.++.++.+|++|+++++++++++.+++|
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~-~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVAL-FDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999985554 45543 23556667777777889999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC--Chhhh
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG--SCDYA 390 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g--~~~Ya 390 (1152)
+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. +.++||++||+++..+.++ ++.|+
T Consensus 86 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~~~Y~ 161 (254)
T PRK06114 86 ALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN---GGGSIVNIASMSGIIVNRGLLQAHYN 161 (254)
T ss_pred CCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc---CCcEEEEECchhhcCCCCCCCcchHH
Confidence 9999999999877 6778889999999999999999999999999997542 3468999999999887765 78999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc--chhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++|+++++|++.++.+.. ..++++.+|.+|.. ++.|....... .....+... -+..+++|....+..++..
T Consensus 162 ~sKaa~~~l~~~la~e~~--~~gi~v~~v~PG~i-~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~ 235 (254)
T PRK06114 162 ASKAGVIHLSKSLAMEWV--GRGIRVNSISPGYT-ATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSD 235 (254)
T ss_pred HHHHHHHHHHHHHHHHHh--hcCeEEEEEeecCc-cCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999999999987643 34568888877655 45553221110 011111111 1345789999988887754
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=218.33 Aligned_cols=222 Identities=11% Similarity=0.043 Sum_probs=172.3
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.+++++||||+ +|||+++|+.|+++|+++++...+.+ ..++..+++.+.+.++.++++|++|+++++++++++.++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 47899999986 89999999999999996544432222 234455666655556788999999999999999999999
Q ss_pred cCCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 311 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
+|++|++|||||+... ..++.+.+.++|++++++|+.|++.+.+++.|+|++ .+.||++||+++..+.++..
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-----~g~Iv~isS~~~~~~~~~~~ 159 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-----GGSIVTLTYLGGVRAIPNYN 159 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-----CCeEEEEeccccccCCcccc
Confidence 9999999999998641 256788899999999999999999999999999853 26799999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|+++.+|++.++.+.. ..++++.+|++|.+.. .|.... ............+ +..+++|...++..++.
T Consensus 160 ~Y~asKaal~~l~~~la~el~--~~gI~Vn~i~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s 236 (258)
T PRK07370 160 VMGVAKAALEASVRYLAAELG--PKNIRVNAISAGPIRT-LASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLS 236 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHhC--cCCeEEEEEecCcccC-chhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhC
Confidence 999999999999999988754 4567899999887754 332111 0111111111111 34578999998888775
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 237 ~ 237 (258)
T PRK07370 237 D 237 (258)
T ss_pred h
Confidence 4
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-21 Score=218.20 Aligned_cols=231 Identities=13% Similarity=0.037 Sum_probs=176.1
Q ss_pred CCCEEEEECCch--hHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~g--GIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||++ |||+++|+.|+++|++ |++..|++..++..+++... +.. .+++||++|+++++++++++.++|
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~-v~~~~r~~~~~~~~~~l~~~~g~~-~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAE-LWFTYQSEVLEKRVKPLAEEIGCN-FVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCE-EEEEeCchHHHHHHHHHHHhcCCc-eEEEccCCCHHHHHHHHHHHHHHc
Confidence 579999999997 9999999999999985 55666764444445555443 433 467999999999999999999999
Q ss_pred CCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 312 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 312 G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
|+||++|||||+... ..++.+.+.++|++++++|+.|++.+.+.+.|+|++ .+.||++||.++..+.+++..
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-----~G~Iv~isS~~~~~~~~~~~~ 159 (260)
T PRK06603 85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD-----GGSIVTLTYYGAEKVIPNYNV 159 (260)
T ss_pred CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----CceEEEEecCccccCCCcccc
Confidence 999999999997541 146778899999999999999999999999999742 267999999999988899999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|+++.+|++.++.+.. ..++++.+|.+|.... .|...... ..........+ +...|+|..+++..++..
T Consensus 160 Y~asKaal~~l~~~la~el~--~~gIrVn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~ 236 (260)
T PRK06603 160 MGVAKAALEASVKYLANDMG--ENNIRVNAISAGPIKT-LASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSE 236 (260)
T ss_pred hhhHHHHHHHHHHHHHHHhh--hcCeEEEEEecCcCcc-hhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999988754 4567889999887753 44221111 11111111122 346899999999988764
Q ss_pred Cc----eeeeeechh
Q psy616 465 DK----IQYLVLSGE 475 (1152)
Q Consensus 465 ~~----~~~~v~~~~ 475 (1152)
.. .+.+.+++.
T Consensus 237 ~~~~itG~~i~vdgG 251 (260)
T PRK06603 237 LSKGVTGEIHYVDCG 251 (260)
T ss_pred ccccCcceEEEeCCc
Confidence 32 244445544
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=215.21 Aligned_cols=224 Identities=16% Similarity=0.130 Sum_probs=176.5
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||++|||++++++|+++|+ +|+++.|+. ..++..++++..+.++.++++|++|+++++++++++.+.+|++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999999998 566666663 3344555566566789999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ..++.+.+.++|++++++|+.|++++.++++|.|.+. ...++||++||+.+..+.+++..|+++|+
T Consensus 80 d~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~g~ii~isS~~~~~~~~~~~~Y~~sKa 156 (252)
T PRK07677 80 DALINNAAGNF-ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEK--GIKGNIINMVATYAWDAGPGVIHSAAAKA 156 (252)
T ss_pred cEEEECCCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc--CCCEEEEEEcChhhccCCCCCcchHHHHH
Confidence 99999999765 5677889999999999999999999999999987542 23478999999999998899999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+.. ...++++.+|.+|.+..++|.... ........+...+ ...++++..+++..++..
T Consensus 157 a~~~~~~~la~e~~-~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 229 (252)
T PRK07677 157 GVLAMTRTLAVEWG-RKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSD 229 (252)
T ss_pred HHHHHHHHHHHHhC-cccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCc
Confidence 99999999887742 124678999999988765553211 1111111122222 245788888887776653
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=216.55 Aligned_cols=221 Identities=11% Similarity=0.016 Sum_probs=169.0
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+ +|||+++|+.|+++|++ |+++.|+....+..+++......+.+++||++|.++++++++++.++||
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAE-LAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 57999999998 59999999999999985 5666666433333344433223456899999999999999999999999
Q ss_pred CeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 313 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
+||++|||||+... ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.||++||.++..+.++++.|
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-----~g~Ii~iss~~~~~~~~~~~~Y 162 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-----GGSLLTMSYYGAEKVVENYNLM 162 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-----CCEEEEEeccccccCCccchhh
Confidence 99999999998641 246778999999999999999999999999999842 2679999999998888999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+++|+++.+|++.++.+.. ..++++.+|.+|... +.|..... .......+...+ +..+|++...++..++..
T Consensus 163 ~asKaal~~l~~~la~el~--~~gI~Vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~ 238 (258)
T PRK07533 163 GPVKAALESSVRYLAAELG--PKGIRVHAISPGPLK-TRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASD 238 (258)
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCcEEEEEecCCcC-ChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCh
Confidence 9999999999999988754 346788899887664 44432111 000111111111 346788988888877653
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-21 Score=215.68 Aligned_cols=221 Identities=13% Similarity=0.094 Sum_probs=169.9
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh-C-CCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-F-NNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~-~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.++++|||||+ +|||+++|+.|+++|++ |++..|+...++..+++.+ . +.++.+++||++|+++++++++++.++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAK-LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 47899999997 89999999999999985 5556665332222333322 1 567889999999999999999999999
Q ss_pred cCCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 311 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
+|+||++|||||+... ..++.+.+.++|.+++++|+.+++++.++++|+|.+ .+.||++||+++..+.++++
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~g~Iv~isS~~~~~~~~~~~ 159 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-----GGSIVTLTYLGGERVVQNYN 159 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-----CceEEEEcccCCccCCCCCc
Confidence 9999999999998641 246778899999999999999999999999998742 26799999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|+++.+|++.++.+.. ..++++.+|.+|.... .|.... ........+...+ +..+|++..+.+..++.
T Consensus 160 ~Y~asKaal~~l~~~la~el~--~~gIrvn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s 236 (257)
T PRK08594 160 VMGVAKASLEASVKYLANDLG--KDGIRVNAISAGPIRT-LSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFS 236 (257)
T ss_pred hhHHHHHHHHHHHHHHHHHhh--hcCCEEeeeecCcccC-HhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcC
Confidence 999999999999999988754 3467888998877643 332111 0100111111111 34688999998888775
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 237 ~ 237 (257)
T PRK08594 237 D 237 (257)
T ss_pred c
Confidence 4
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-21 Score=241.01 Aligned_cols=229 Identities=14% Similarity=0.067 Sum_probs=186.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|++|+++|++ |++++|+. ..+++.+.++..|.++.++.||++|.+++.++++++.+.+|+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAE-VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999986 66667764 345566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. .+.+.+.+.++|++++++|+.|++++.+++.|.|.+. ...++||++||+++..+.++.+.|+++|
T Consensus 393 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 469 (582)
T PRK05855 393 PDIVVNNAGIGM-AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVER--GTGGHIVNVASAAAYAPSRSLPAYATSK 469 (582)
T ss_pred CcEEEECCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCcEEEEECChhhccCCCCCcHHHHHH
Confidence 999999999987 6788899999999999999999999999999998653 2347899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----c-cc---h-hHHhhcCCCCCCHHHHHHHHHHHHh
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----E-QT---D-FYFKSSKQKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----~-~~---~-~~~~~~g~~~l~~~e~~~~l~~~l~ 463 (1152)
+++++|++.++.+.. ..++++.+|.+|.+.. .|..... . .. . ......+...++|+++++.+.+++.
T Consensus 470 aa~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~ 546 (582)
T PRK05855 470 AAVLMLSECLRAELA--AAGIGVTAICPGFVDT-NIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVK 546 (582)
T ss_pred HHHHHHHHHHHHHhc--ccCcEEEEEEeCCCcc-cchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHH
Confidence 999999999987754 4467999999998854 3322110 0 00 0 0011123345789999999999998
Q ss_pred cCceeee
Q psy616 464 QDKIQYL 470 (1152)
Q Consensus 464 ~~~~~~~ 470 (1152)
.+.+.+.
T Consensus 547 ~~~~~~~ 553 (582)
T PRK05855 547 RNKAVVP 553 (582)
T ss_pred cCCCEEE
Confidence 8876544
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-21 Score=212.46 Aligned_cols=223 Identities=14% Similarity=0.113 Sum_probs=176.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCC-cEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNN-KAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~-~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++||||++|||+++|++|+ +|+ +|++++|+ +..+++.+++++.+. ++.+++||++|.++++++++++.+.+|+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999 575 56666776 444566677776664 48899999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ...+.+.+.+++.+++.+|+.+.+.+.+.+.|.|.+. ...+.||++||.++..+.++...|+++|+
T Consensus 79 d~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 155 (246)
T PRK05599 79 SLAVVAFGILG-DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQ--TAPAAIVAFSSIAGWRARRANYVYGSTKA 155 (246)
T ss_pred CEEEEecCcCC-CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhc--CCCCEEEEEeccccccCCcCCcchhhHHH
Confidence 99999999876 4556677888899999999999999999999998642 22468999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCce-eeeeec
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI-QYLVLS 473 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~-~~~v~~ 473 (1152)
++.+|++.++.+.. ..++++.+|.+|.+. +.|...... .. ..++|++..+.+..++..+.. +.+..+
T Consensus 156 a~~~~~~~la~el~--~~~I~v~~v~PG~v~-T~~~~~~~~--------~~-~~~~pe~~a~~~~~~~~~~~~~~~~~~~ 223 (246)
T PRK05599 156 GLDAFCQGLADSLH--GSHVRLIIARPGFVI-GSMTTGMKP--------AP-MSVYPRDVAAAVVSAITSSKRSTTLWIP 223 (246)
T ss_pred HHHHHHHHHHHHhc--CCCceEEEecCCccc-chhhcCCCC--------CC-CCCCHHHHHHHHHHHHhcCCCCceEEeC
Confidence 99999999988743 456788999888775 334221110 01 136899999999999887642 334444
Q ss_pred hhh
Q psy616 474 GEL 476 (1152)
Q Consensus 474 ~~~ 476 (1152)
+.+
T Consensus 224 ~~~ 226 (246)
T PRK05599 224 GRL 226 (246)
T ss_pred ccH
Confidence 433
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-21 Score=216.01 Aligned_cols=234 Identities=12% Similarity=-0.000 Sum_probs=175.9
Q ss_pred cCCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 234 KQGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 234 ~~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
-.++++|||||+ +|||+++|+.|+++|+ +|++.+|++...+..+++.+.-..+..+++|++|+++++++++++.+++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 367999999997 8999999999999998 4566677643334444443321235678999999999999999999999
Q ss_pred CCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 312 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 312 G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
|+||++|||||+... ..++.+.+.++|++++++|+.|++.+.+++.|+|++ .+.||++||+++..+.+++..
T Consensus 87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-----~g~Iv~iss~~~~~~~p~~~~ 161 (272)
T PRK08159 87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-----GGSILTLTYYGAEKVMPHYNV 161 (272)
T ss_pred CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-----CceEEEEeccccccCCCcchh
Confidence 999999999998641 246778899999999999999999999999998732 267999999999888999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc--chhHHh-hcCC-CCCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--TDFYFK-SSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~~~~~~-~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|....... .....+ ...+ +..+|+|..+++..++..
T Consensus 162 Y~asKaal~~l~~~la~el~--~~gIrVn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~ 238 (272)
T PRK08159 162 MGVAKAALEASVKYLAVDLG--PKNIRVNAISAGPIK-TLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSD 238 (272)
T ss_pred hhhHHHHHHHHHHHHHHHhc--ccCeEEEEeecCCcC-CHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCc
Confidence 99999999999999988754 456788899888664 4443211110 000001 1111 346899999999888864
Q ss_pred Cc----eeeeeechhh
Q psy616 465 DK----IQYLVLSGEL 476 (1152)
Q Consensus 465 ~~----~~~~v~~~~~ 476 (1152)
.. .+.+.+++.+
T Consensus 239 ~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 239 LSRGVTGEVHHVDSGY 254 (272)
T ss_pred cccCccceEEEECCCc
Confidence 32 2444455543
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-21 Score=215.61 Aligned_cols=220 Identities=10% Similarity=0.007 Sum_probs=170.6
Q ss_pred CCCEEEEECCch--hHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~g--GIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++ |||+++|+.|+++|++ |++..|+...++..+++......+.+++||++|+++++++++++.++||
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~-vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCE-EEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 578999999985 9999999999999985 5666676444455566665545677899999999999999999999999
Q ss_pred CeeEEEEcccccCcCc-----ccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 313 PIDGVLHIAGISGLTS-----NILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~-----~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
+||++|||||+.. .. .+.+.+.++|++++++|+.|++.+.+++.|+|+ . .+.||++||+++..+.++..
T Consensus 84 ~iD~linnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~--~g~Iv~iss~~~~~~~~~~~ 157 (262)
T PRK07984 84 KFDGFVHSIGFAP-GDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN---P--GSALLTLSYLGAERAIPNYN 157 (262)
T ss_pred CCCEEEECCccCC-ccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc---C--CcEEEEEecCCCCCCCCCcc
Confidence 9999999999864 22 256788999999999999999999999988652 1 25799999999988889999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc---hhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT---DFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~---~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|+++.+|++.++.+.. ..++++.+|.+|.... .|........ ........+ +...|+|....+..++.
T Consensus 158 ~Y~asKaal~~l~~~la~el~--~~gIrVn~i~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s 234 (262)
T PRK07984 158 VMGLAKASLEANVRYMANAMG--PEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS 234 (262)
T ss_pred hhHHHHHHHHHHHHHHHHHhc--ccCcEEeeeecCcccc-hHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcC
Confidence 999999999999999998754 4467888998887653 3432111100 011111122 34688999999888775
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 235 ~ 235 (262)
T PRK07984 235 D 235 (262)
T ss_pred c
Confidence 4
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-21 Score=218.70 Aligned_cols=222 Identities=14% Similarity=0.088 Sum_probs=172.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc---chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK---LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~---~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||++|||+++|+.|+++|+. |++.+|+. ..+++.+.++..+.++.++.||++|.+++.++++++.+.+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999985 45555542 2234444455667788899999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|+||++|||||.......+.+.+.++|++++++|+.|++++.+++.|+|++ .++||++||+++..+.+++..|++
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-----~g~iv~iSS~~~~~~~~~~~~Y~a 201 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-----GASIITTSSIQAYQPSPHLLDYAA 201 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-----CCEEEEECCchhccCCCCcchhHH
Confidence 999999999997532456888999999999999999999999999998742 267999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--ccc-chhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+|++++.|++.++.+.. ..++++.+|.+|... +.|.... ... .....+...+ +...|+|....+..++...
T Consensus 202 sKaal~~l~~~la~el~--~~gIrvn~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~ 276 (294)
T PRK07985 202 TKAAILNYSRGLAKQVA--EKGIRVNIVAPGPIW-TALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE 276 (294)
T ss_pred HHHHHHHHHHHHHHHHh--HhCcEEEEEECCcCc-cccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChh
Confidence 99999999999987643 335688889887664 4442111 111 1111111111 2468999999988877543
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-21 Score=213.92 Aligned_cols=221 Identities=13% Similarity=0.016 Sum_probs=167.0
Q ss_pred CCCEEEEECC--chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg--~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++||||| ++|||+++|+.|+++|++ |++..|....++..+++.+ .+. ..+++||++|+++++++++++.++|
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHHHh
Confidence 4789999996 689999999999999985 4555544332333334433 343 3578999999999999999999999
Q ss_pred CCeeEEEEcccccCcC----cccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 312 GPIDGVLHIAGISGLT----SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~----~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
|+||++|||||+.... ..+.+.+.++|++++++|+.|++.+.++++|+|++ .+.||++||+++..+.++..
T Consensus 83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-----~g~Ii~iss~~~~~~~~~~~ 157 (260)
T PRK06997 83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-----DASLLTLSYLGAERVVPNYN 157 (260)
T ss_pred CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-----CceEEEEeccccccCCCCcc
Confidence 9999999999986411 12456889999999999999999999999999731 25799999999998989999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc--c-chhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--Q-TDFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|+++.+|++.++.+.. ..++++.+|.+|.+. +.|...... . .........+ +..+|+|..+++..++.
T Consensus 158 ~Y~asKaal~~l~~~la~el~--~~gIrVn~i~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s 234 (260)
T PRK06997 158 TMGLAKASLEASVRYLAVSLG--PKGIRANGISAGPIK-TLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLS 234 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEeeCccc-cchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhC
Confidence 999999999999999988754 446788899988664 344321110 0 0111111112 34689999999998876
Q ss_pred cC
Q psy616 464 QD 465 (1152)
Q Consensus 464 ~~ 465 (1152)
..
T Consensus 235 ~~ 236 (260)
T PRK06997 235 DL 236 (260)
T ss_pred cc
Confidence 43
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=213.52 Aligned_cols=221 Identities=12% Similarity=0.051 Sum_probs=174.6
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEe----cCC-------cchHHHHHHHHhCCCcEEEEEecCCCHHHHH
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILS----GRS-------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMI 301 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~----~R~-------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~ 301 (1152)
+++++|||||+ +|||+++|++|+++|++++++. .|. ....+..+++++.|.++.++++|++|.+++.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~ 84 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK 84 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 47899999998 4999999999999998655442 111 1112344556677889999999999999999
Q ss_pred HHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc
Q psy616 302 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL 381 (1152)
Q Consensus 302 ~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~ 381 (1152)
++++++.+.+|++|+||||||... ..++.+.+.++|++++++|+.|++.+.+.+.|.|++. ..++||++||+++..
T Consensus 85 ~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~ 160 (256)
T PRK12859 85 ELLNKVTEQLGYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK---SGGRIINMTSGQFQG 160 (256)
T ss_pred HHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---CCeEEEEEcccccCC
Confidence 999999999999999999999876 6788999999999999999999999999999997542 346899999999999
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCC-CCCHHHHHHHHHH
Q psy616 382 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQK-VLHENDGLKLFEQ 460 (1152)
Q Consensus 382 g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~-~l~~~e~~~~l~~ 460 (1152)
+.+++..|+++|++++.|++.++.+.. ..++++.+|.||.+.. +|... ...........+. ..+|++..+.+..
T Consensus 161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~i~v~~v~PG~i~t-~~~~~--~~~~~~~~~~~~~~~~~~~d~a~~~~~ 235 (256)
T PRK12859 161 PMVGELAYAATKGAIDALTSSLAAEVA--HLGITVNAINPGPTDT-GWMTE--EIKQGLLPMFPFGRIGEPKDAARLIKF 235 (256)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhh--hhCeEEEEEEEccccC-CCCCH--HHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 999999999999999999999887654 3467999999998864 43221 1111112222222 3478899888887
Q ss_pred HHhc
Q psy616 461 LLIQ 464 (1152)
Q Consensus 461 ~l~~ 464 (1152)
++..
T Consensus 236 l~s~ 239 (256)
T PRK12859 236 LASE 239 (256)
T ss_pred HhCc
Confidence 7654
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-21 Score=215.21 Aligned_cols=217 Identities=13% Similarity=0.125 Sum_probs=175.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++++.|+++|+. |++.+|++. .++..+.+ + ++.++.||++|++++.++++.+.+.+|+
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGAR-VAIGDLDEALAKETAAEL---G-LVVGGPLDVTDPASFAAFLDAVEADLGP 78 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHh---c-cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999885 666666532 22222333 2 5788999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|++|||||+.. ...+.+.+.++|++++++|+.|++++.+.++|.|.+. +.++||++||+++..+.++++.|+++|
T Consensus 79 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 154 (273)
T PRK07825 79 IDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR---GRGHVVNVASLAGKIPVPGMATYCASK 154 (273)
T ss_pred CCEEEECCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCEEEEEcCccccCCCCCCcchHHHH
Confidence 999999999987 6788899999999999999999999999999997643 446899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeee
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYL 470 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~ 470 (1152)
+++.+|++.++.+.. ..+++++.|.++.+. +.|..... ...+...+++++..+.+..++..+.....
T Consensus 155 aa~~~~~~~l~~el~--~~gi~v~~v~Pg~v~-t~~~~~~~-------~~~~~~~~~~~~va~~~~~~l~~~~~~~~ 221 (273)
T PRK07825 155 HAVVGFTDAARLELR--GTGVHVSVVLPSFVN-TELIAGTG-------GAKGFKNVEPEDVAAAIVGTVAKPRPEVR 221 (273)
T ss_pred HHHHHHHHHHHHHhh--ccCcEEEEEeCCcCc-chhhcccc-------cccCCCCCCHHHHHHHHHHHHhCCCCEEe
Confidence 999999988877643 345688888777654 44432211 11234568999999999999987665443
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=208.74 Aligned_cols=224 Identities=18% Similarity=0.141 Sum_probs=179.9
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++++|||||+||||++++++|+++|. +|++++|+. ..++..+.+... +.++.++++|++|++++.++++++.++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999986 566666664 334444445433 56899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-ChhhhH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-SCDYAM 391 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g-~~~Yaa 391 (1152)
++|+||||||+.. ...+.+.+.+.+++++++|+.|++.+.+.+.|.|++. ..++||++||..+..|.++ +..|++
T Consensus 81 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~Y~~ 156 (248)
T PRK08251 81 GLDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ---GSGHLVLISSVSAVRGLPGVKAAYAA 156 (248)
T ss_pred CCCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCeEEEEeccccccCCCCCcccHHH
Confidence 9999999999987 6677788899999999999999999999999987643 3568999999999998886 689999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeeee
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLV 471 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~v 471 (1152)
+|++++.+++.++.+.. ..++++.+|.+|.+. +.|..... .+...++++++++.+.+.+..+...+.+
T Consensus 157 sK~a~~~~~~~l~~~~~--~~~i~v~~v~pg~v~-t~~~~~~~---------~~~~~~~~~~~a~~i~~~~~~~~~~~~~ 224 (248)
T PRK08251 157 SKAGVASLGEGLRAELA--KTPIKVSTIEPGYIR-SEMNAKAK---------STPFMVDTETGVKALVKAIEKEPGRAAV 224 (248)
T ss_pred HHHHHHHHHHHHHHHhc--ccCcEEEEEecCcCc-chhhhccc---------cCCccCCHHHHHHHHHHHHhcCCCeEEc
Confidence 99999999998887643 345688899888775 44432111 1234689999999999999877655544
Q ss_pred echhh
Q psy616 472 LSGEL 476 (1152)
Q Consensus 472 ~~~~~ 476 (1152)
...+|
T Consensus 225 ~~~~~ 229 (248)
T PRK08251 225 PWWPW 229 (248)
T ss_pred CcchH
Confidence 33334
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=213.41 Aligned_cols=192 Identities=14% Similarity=0.134 Sum_probs=159.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|+.|+++|+. |++++|+ +..++..+++...+.++.++.+|++|.++++++++.+.+.+|+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMK-LVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999985 5555665 3345555666666778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCC---CCCEEEEecCCccccCCCCChhhh
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN---KLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~---~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
+|+||||||... ...+.+.+.++|+.++++|+.|++++.++++|.|.+.... ..++||++||+++..+.++++.|+
T Consensus 84 id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 162 (287)
T PRK06194 84 VHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYN 162 (287)
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchH
Confidence 999999999987 6778889999999999999999999999999998754321 126899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccc
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 429 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 429 (1152)
++|++++.|++.++.+.......+++.++.+|.. .+.|
T Consensus 163 ~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i-~t~~ 200 (287)
T PRK06194 163 VSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFV-PTGI 200 (287)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcc-cCcc
Confidence 9999999999988765322234567778877655 3444
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-21 Score=210.84 Aligned_cols=222 Identities=15% Similarity=0.156 Sum_probs=174.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||+||||++++++|+++|++ |++++|+ +..++...++...+.++.++++|++|+++++++++++.+++|+|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFK-VAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999985 5555555 34455666677667788999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++.+.+.+.+.|++.. ..+.||++||..+..+.+++..|+++|+
T Consensus 81 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 157 (256)
T PRK08643 81 NVVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLG--HGGKIINATSQAGVVGNPELAVYSSTKF 157 (256)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCCEEEEECccccccCCCCCchhHHHHH
Confidence 99999999876 67788889999999999999999999999999986432 2367999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc----------cc--chhHHhhcCC-CCCCHHHHHHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN----------EQ--TDFYFKSSKQ-KVLHENDGLKLFEQL 461 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~----------~~--~~~~~~~~g~-~~l~~~e~~~~l~~~ 461 (1152)
+++.|++.++.+.. ..++++.+|.+|.+. +.|..... .. .....+.... +..++++....+..+
T Consensus 158 a~~~~~~~la~e~~--~~gi~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L 234 (256)
T PRK08643 158 AVRGLTQTAARDLA--SEGITVNAYAPGIVK-TPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFL 234 (256)
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEeeCCCc-ChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence 99999999887643 346788888877654 33321100 00 0011111111 235788888888877
Q ss_pred Hhc
Q psy616 462 LIQ 464 (1152)
Q Consensus 462 l~~ 464 (1152)
+..
T Consensus 235 ~~~ 237 (256)
T PRK08643 235 AGP 237 (256)
T ss_pred hCc
Confidence 754
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.9e-21 Score=210.37 Aligned_cols=223 Identities=12% Similarity=0.120 Sum_probs=174.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|++|+++|+.++++.+++. ..++..++++..+.++.++.||++|.+++.++++++.+.+|+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999987666555542 334455666667888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ..++.+.+.++|++++++|+.|++.+.+++.|.|++. ..++||++||..+..+.+++..|+++|
T Consensus 82 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~y~~sK 157 (246)
T PRK12938 82 IDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER---GWGRIINISSVNGQKGQFGQTNYSTAK 157 (246)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCeEEEEEechhccCCCCCChhHHHHH
Confidence 999999999876 6678889999999999999999999999999987542 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-cccchhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++.+|.+|.+.+ .+.... ............ ....++++..+.+..++..
T Consensus 158 ~a~~~~~~~l~~~~~--~~gi~v~~i~pg~~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~ 227 (246)
T PRK12938 158 AGIHGFTMSLAQEVA--TKGVTVNTVSPGYIGT-DMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASE 227 (246)
T ss_pred HHHHHHHHHHHHHhh--hhCeEEEEEEecccCC-chhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCc
Confidence 999999988876643 3456888999887754 332211 111111111111 1235678888777776643
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.7e-21 Score=210.35 Aligned_cols=223 Identities=11% Similarity=0.066 Sum_probs=176.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||++|||.++|+.|+++|+++ +++.++. .++..++++..+.++.++++|++|.++++++++++.+++|++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~v-v~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDI-VGINIVE-PTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEE-EEecCcc-hHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999854 4555544 344556666667788999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.|.|.+. .+.+.||++||.++..+.++...|+++|+
T Consensus 87 D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 163 (253)
T PRK08993 87 DILVNNAGLIR-REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ--GNGGKIINIASMLSFQGGIRVPSYTASKS 163 (253)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC--CCCeEEEEECchhhccCCCCCcchHHHHH
Confidence 99999999876 6678899999999999999999999999999998642 22467999999999999899999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++|++.++.+.. ..++++.+|.+|... +.|....... .....+... -+...|+|....+..++...
T Consensus 164 a~~~~~~~la~e~~--~~gi~v~~v~pG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~ 235 (253)
T PRK08993 164 GVMGVTRLMANEWA--KHNINVNAIAPGYMA-TNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSA 235 (253)
T ss_pred HHHHHHHHHHHHhh--hhCeEEEEEeeCccc-CcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999999987743 345788888887775 4443221110 011111111 23568999999998887643
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=209.95 Aligned_cols=222 Identities=18% Similarity=0.191 Sum_probs=175.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|++|+++|+ +|++.+|+ +..++..++++..+.++.++.+|++|+++++++++.+.+++|+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999997 55566665 4445566677766778889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ..++.+.+.++|++++++|+.|++++.+.+.+.|.+. +.++||++||+++..+.++...|+++|
T Consensus 87 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~~sK 162 (254)
T PRK08085 87 IDVLINNAGIQR-RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR---QAGKIINICSMQSELGRDTITPYAASK 162 (254)
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEEccchhccCCCCCcchHHHH
Confidence 999999999876 6678889999999999999999999999999987542 347899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--cc-chhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++.+|.+|.... .|..... .. ......... ....+++|...++..++..
T Consensus 163 ~a~~~~~~~la~e~~--~~gi~v~~v~pG~~~t-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~ 234 (254)
T PRK08085 163 GAVKMLTRGMCVELA--RHNIQVNGIAPGYFKT-EMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSK 234 (254)
T ss_pred HHHHHHHHHHHHHHH--hhCeEEEEEEeCCCCC-cchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999887643 3456888888876654 3322111 11 111111111 1235788988888877764
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=212.78 Aligned_cols=217 Identities=12% Similarity=0.133 Sum_probs=174.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|+ +|++++|+ +..++..+++...+.++.++.+|++|.+++.++++.+.+.+|+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999987 55666665 3445556666666778899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccC--CHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-CCCChhhh
Q psy616 314 IDGVLHIAGISGLTSNILEA--NYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-DFGSCDYA 390 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~--~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g-~~g~~~Ya 390 (1152)
+|+||||||+.. ...+.+. +.++++..+++|+.|++++.++++|.|++. ..+.||++||.++..+ .++...|+
T Consensus 118 id~li~~AG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~p~~~~Y~ 193 (293)
T PRK05866 118 VDILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER---GDGHIINVATWGVLSEASPLFSVYN 193 (293)
T ss_pred CCEEEECCCCCC-CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCcEEEEECChhhcCCCCCCcchHH
Confidence 999999999876 4555443 468899999999999999999999998653 3467999999876653 57888999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
++|+++++|++.++.+.. ..++++.+|++|.+.. .|.... ....++..++++++++.+...+..+.
T Consensus 194 asKaal~~l~~~la~e~~--~~gI~v~~v~pg~v~T-~~~~~~-------~~~~~~~~~~pe~vA~~~~~~~~~~~ 259 (293)
T PRK05866 194 ASKAALSAVSRVIETEWG--DRGVHSTTLYYPLVAT-PMIAPT-------KAYDGLPALTADEAAEWMVTAARTRP 259 (293)
T ss_pred HHHHHHHHHHHHHHHHhc--ccCcEEEEEEcCcccC-cccccc-------ccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 999999999999987653 3467899999998764 343211 01123456899999999999988764
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.5e-21 Score=213.16 Aligned_cols=184 Identities=15% Similarity=0.141 Sum_probs=158.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+. ..++..+++... +.++.++++|++|.++++++++++.+.+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGAS-VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999985 56666664 344455555543 3578899999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+.+.++|.|++. ..++||++||+++..+.+++..|++
T Consensus 86 g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~y~a 161 (265)
T PRK07062 86 GGVDMLVNNAGQGR-VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS---AAASIVCVNSLLALQPEPHMVATSA 161 (265)
T ss_pred CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc---CCcEEEEeccccccCCCCCchHhHH
Confidence 99999999999876 6788899999999999999999999999999997643 3468999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
+|+++.+|++.++.+.. ..++++.+|.+|...
T Consensus 162 sKaal~~~~~~la~e~~--~~gi~v~~i~PG~v~ 193 (265)
T PRK07062 162 ARAGLLNLVKSLATELA--PKGVRVNSILLGLVE 193 (265)
T ss_pred HHHHHHHHHHHHHHHhh--hcCeEEEEEecCccc
Confidence 99999999999887754 346788899887664
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=208.61 Aligned_cols=223 Identities=11% Similarity=0.069 Sum_probs=176.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||++|||+++|++|+++|+.++++..|+. ..+...++++..+.++.++.+|++|.++++++++++.+.+|++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999986655555543 3345566777778899999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ...+.+.+.++|++++.+|+.|++++.+++.+.|.+. ...++||++||..+..+.++...|+++|+
T Consensus 82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~g~ii~isS~~~~~~~~~~~~Y~~sK~ 158 (256)
T PRK12743 82 DVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQ--GQGGRIINITSVHEHTPLPGASAYTAAKH 158 (256)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCeEEEEEeeccccCCCCCcchhHHHHH
Confidence 99999999876 5667788999999999999999999999999998542 23467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhh-cCCCCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKS-SKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~-~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+.. ..++++++|.+|.+... |........ ...... ...+..++++..+++..++..
T Consensus 159 a~~~l~~~la~~~~--~~~i~v~~v~Pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 227 (256)
T PRK12743 159 ALGGLTKAMALELV--EHGILVNAVAPGAIATP-MNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSE 227 (256)
T ss_pred HHHHHHHHHHHHhh--hhCeEEEEEEeCCccCc-cccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999998887643 34568899999887643 221111111 111111 112345789999988887753
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=207.98 Aligned_cols=223 Identities=18% Similarity=0.166 Sum_probs=176.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++||||+||||.++|++|+++|+.++++.+|++ ..++..+.++..+.++.++++|++|++++.++++++.+.+|+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999987665555543 334455667667778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ...+.+.+.++++.++++|+.+++++.+++.|.|.+. ..++||++||+++..+.++.+.|+++|
T Consensus 85 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK 160 (247)
T PRK12935 85 VDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA---EEGRIISISSIIGQAGGFGQTNYSAAK 160 (247)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEEcchhhcCCCCCCcchHHHH
Confidence 999999999877 6677888999999999999999999999999997542 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch-hHHhhc-CCCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-FYFKSS-KQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~~~~~~-g~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..+++++.|.+|.+. ++|......... ...... .-....+++..+.+..++..
T Consensus 161 ~a~~~~~~~l~~~~~--~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~ 230 (247)
T PRK12935 161 AGMLGFTKSLALELA--KTNVTVNAICPGFID-TEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD 230 (247)
T ss_pred HHHHHHHHHHHHHHH--HcCcEEEEEEeCCCc-ChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999998877643 345688888888775 444322211111 111111 11347899999998887753
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=208.24 Aligned_cols=222 Identities=16% Similarity=0.109 Sum_probs=174.7
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++|+||||+||||.+++++|+++|++ |+++.|+ ...++..++++..+.++.++.+|++|++++.++++.+.+++|++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFA-VAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 58999999999999999999999984 5555665 333455666777788899999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
+||||||... ..++.+.+.++|++++++|+.+++.+.+.+.+.|++.. ..++||++||..+..|.++++.|+++|++
T Consensus 80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 156 (254)
T TIGR02415 80 VMVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQG--HGGKIINAASIAGHEGNPILSAYSSTKFA 156 (254)
T ss_pred EEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC--CCeEEEEecchhhcCCCCCCcchHHHHHH
Confidence 9999999876 67888999999999999999999999999999986532 23689999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc------------chhHHhhc-CCCCCCHHHHHHHHHHHH
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ------------TDFYFKSS-KQKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~------------~~~~~~~~-g~~~l~~~e~~~~l~~~l 462 (1152)
++.|++.++.+.. ..++++.+|.+|.. +++|....... .....+.. .-...++++..+++..++
T Consensus 157 ~~~~~~~l~~~~~--~~~i~v~~v~Pg~i-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 233 (254)
T TIGR02415 157 VRGLTQTAAQELA--PKGITVNAYCPGIV-KTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLA 233 (254)
T ss_pred HHHHHHHHHHHhc--ccCeEEEEEecCcc-cChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhc
Confidence 9999998877643 33568888887754 45543211100 00011111 112467788888888777
Q ss_pred hcC
Q psy616 463 IQD 465 (1152)
Q Consensus 463 ~~~ 465 (1152)
...
T Consensus 234 ~~~ 236 (254)
T TIGR02415 234 SED 236 (254)
T ss_pred ccc
Confidence 654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-20 Score=207.01 Aligned_cols=218 Identities=15% Similarity=0.074 Sum_probs=170.5
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh-cCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN-IGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~-~G~i 314 (1152)
+++|||||+||||++++++|+++|+. |+++.|+.. .++..+.+. +.++.+++||++|.+++.++++.+.+. ++++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWR-VGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 68999999999999999999999984 555556532 233333332 567899999999999999999998776 7899
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ...+.+.+.++++.++++|+.|++++.+++.+.|++. +.++||++||..+..|.++...|+++|+
T Consensus 79 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~~sKa 154 (260)
T PRK08267 79 DVLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT---PGARVINTSSASAIYGQPGLAVYSATKF 154 (260)
T ss_pred CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCCEEEEeCchhhCcCCCCchhhHHHHH
Confidence 99999999987 6778889999999999999999999999999987642 4578999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-cchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++.|++.++.+.. ..++++++|. |.|-.+.|...... .........+ ..+++++....+..++..+
T Consensus 155 a~~~~~~~l~~~~~--~~~i~v~~i~-pg~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 155 AVRGLTEALDLEWR--RHGIRVADVM-PLFVDTAMLDGTSNEVDAGSTKRLG-VRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEe-cCCcCCcccccccchhhhhhHhhcc-CCCCHHHHHHHHHHHHhCC
Confidence 99999999876643 3456888884 55555555432111 1111122222 2578899999999888654
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=209.85 Aligned_cols=224 Identities=12% Similarity=0.046 Sum_probs=172.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++|||+++|+.|+++|++++++..|+ +..+...++++. .+.++.++++|++|+++++++++++.+.+|
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 578999999999999999999999998644443333 223444455543 366899999999999999999999999999
Q ss_pred CeeEEEEcccccC-----cCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 313 PIDGVLHIAGISG-----LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 313 ~idgvIh~AG~~~-----~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
++|.||||||+.. ...++.+.+.++|.+++++|+.+.+.+.+.+.|.|++. +.+.||++||..+..+.++..
T Consensus 87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~ 163 (260)
T PRK08416 87 RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV---GGGSIISLSSTGNLVYIENYA 163 (260)
T ss_pred CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc---CCEEEEEEeccccccCCCCcc
Confidence 9999999998753 12456788899999999999999999999999987542 346799999999998999999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc--c-chhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--Q-TDFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|+++++|++.++.+.. ..++++.+|.+|... +.|...... . .....+...+ +..+|++....+..++.
T Consensus 164 ~Y~asK~a~~~~~~~la~el~--~~gi~v~~v~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~ 240 (260)
T PRK08416 164 GHGTSKAAVETMVKYAATELG--EKNIRVNAVSGGPID-TDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCS 240 (260)
T ss_pred cchhhHHHHHHHHHHHHHHhh--hhCeEEEEEeeCccc-ChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 999999999999999988754 346788899887664 445322111 1 1111111122 35689999999888775
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 241 ~ 241 (260)
T PRK08416 241 E 241 (260)
T ss_pred h
Confidence 4
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-20 Score=207.82 Aligned_cols=222 Identities=13% Similarity=0.096 Sum_probs=178.7
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||+||||++++++|+++|.. |+++.|+ +..++..++++..+.++.+++||++|.+++.++++.+.++++++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWR-LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 36899999999999999999999985 5555555 444556667777788899999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
+||||||... ...+.+.+.++|++.+++|+.+++.+.+.++|.|++. ..++||++||.++..+.++.+.|+++|++
T Consensus 80 ~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa 155 (270)
T PRK05650 80 VIVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ---KSGRIVNIASMAGLMQGPAMSSYNVAKAG 155 (270)
T ss_pred EEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC---CCCEEEEECChhhcCCCCCchHHHHHHHH
Confidence 9999999887 6778899999999999999999999999999998653 35689999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch---hHH-hhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD---FYF-KSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~---~~~-~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++|++.++.+.. ..++++++|.+|..... |......... ... ......++++++.++.+...+..+.
T Consensus 156 ~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~~ 227 (270)
T PRK05650 156 VVALSETLLVELA--DDEIGVHVVCPSFFQTN-LLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKGE 227 (270)
T ss_pred HHHHHHHHHHHhc--ccCcEEEEEecCccccC-cccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCC
Confidence 9999999988753 34568888887777543 3221111111 001 1112235899999999999988665
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=208.93 Aligned_cols=215 Identities=15% Similarity=0.112 Sum_probs=170.6
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+++|||||+||||.+++++|+++|+ +|++++|+ +..++..+++...+ ++.++.||++|++++.++++++.+++|++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 47899999999999999999999998 55555665 33333444443333 78999999999999999999999999999
Q ss_pred eEEEEcccccCcCccc-ccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 315 DGVLHIAGISGLTSNI-LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~-~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
|+||||||... .... .+.+.++|+..+++|+.|++++.+.++|.|++. +.++||++||+++..+.++...|+++|
T Consensus 80 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~asK 155 (257)
T PRK07024 80 DVVIANAGISV-GTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA---RRGTLVGIASVAGVRGLPGAGAYSASK 155 (257)
T ss_pred CEEEECCCcCC-CccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc---CCCEEEEEechhhcCCCCCCcchHHHH
Confidence 99999999865 3333 337889999999999999999999999997543 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCce
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
++++.|++.++.+.. ..++++++|.+|.+... |...... .....+++++..+.+...+..+..
T Consensus 156 ~a~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~t~-~~~~~~~--------~~~~~~~~~~~a~~~~~~l~~~~~ 218 (257)
T PRK07024 156 AAAIKYLESLRVELR--PAGVRVVTIAPGYIRTP-MTAHNPY--------PMPFLMDADRFAARAARAIARGRR 218 (257)
T ss_pred HHHHHHHHHHHHHhh--ccCcEEEEEecCCCcCc-hhhcCCC--------CCCCccCHHHHHHHHHHHHhCCCc
Confidence 999999998876543 34579999999888643 3211100 001236899999999999987654
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-20 Score=206.25 Aligned_cols=222 Identities=17% Similarity=0.137 Sum_probs=176.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||++|||.++|++|+++|+ +|++++|+. .++..+.++..+.++.++.+|+++.+++.++++++.+.++++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSE-PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCch-HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999998 566667764 344556666667789999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ...+.+.+.++|++++++|+.+++++.+++.|.|++.. ..+.||++||.++..+.++...|+++|+
T Consensus 82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~g~iv~~sS~~~~~~~~~~~~Y~~sKa 158 (248)
T TIGR01832 82 DILVNNAGIIR-RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQG--RGGKIINIASMLSFQGGIRVPSYTASKH 158 (248)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CCeEEEEEecHHhccCCCCCchhHHHHH
Confidence 99999999876 56777889999999999999999999999999876422 2467999999999988889999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhc-CCCCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSS-KQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~-g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+.. ..++++.+|.+|.... .|....... .....+.. .-+..++++..+++..++..
T Consensus 159 a~~~~~~~la~e~~--~~gi~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 229 (248)
T TIGR01832 159 GVAGLTKLLANEWA--AKGINVNAIAPGYMAT-NNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASS 229 (248)
T ss_pred HHHHHHHHHHHHhC--ccCcEEEEEEECcCcC-cchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999988743 3457888999887754 332211110 01111111 12457899999998888754
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-20 Score=209.61 Aligned_cols=222 Identities=13% Similarity=0.056 Sum_probs=173.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||.+++++|+++|+. |+++.|+. ..+...+++...+.++.++.+|++|+++++++++++.+.+++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGAN-VAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999885 66666653 334445566666677889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||... ...+.+.+.++|++.+++|+.|++++.+++.|.|++. .++||++||+++..+.+++..|+++|
T Consensus 87 iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~----~g~iv~iss~~~~~~~~~~~~Y~asK 161 (264)
T PRK07576 87 IDVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP----GASIIQISAPQAFVPMPMQAHVCAAK 161 (264)
T ss_pred CCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCEEEEECChhhccCCCCccHHHHHH
Confidence 999999999766 5678889999999999999999999999999987532 36899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCc-ccccccc-ccchhHH-hhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS-KFKIGNN-EQTDFYF-KSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~-Gm~~~~~-~~~~~~~-~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++.+|.+|.+.++ +|..... ....... +... .+...+++..+.+..++..
T Consensus 162 ~a~~~l~~~la~e~~--~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 234 (264)
T PRK07576 162 AGVDMLTRTLALEWG--PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASD 234 (264)
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCh
Confidence 999999999887643 34578899999887643 2321100 0100011 1111 1235688888888887754
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=206.25 Aligned_cols=222 Identities=16% Similarity=0.122 Sum_probs=179.3
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
...++++||||+||||+.+++.|+++|. +|++++|++ ..+++.++++..+.++.++.+|++|.+++.++++.+.+++|
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999998 566667764 33445555666677899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||... ..++.+.+.++|+.++++|+.+++++.+.+.|.|++. ..++||++||..+..+.+++..|+++
T Consensus 83 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~~s 158 (241)
T PRK07454 83 CPDVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR---GGGLIINVSSIAARNAFPQWGAYCVS 158 (241)
T ss_pred CCCEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc---CCcEEEEEccHHhCcCCCCccHHHHH
Confidence 9999999999877 6678888999999999999999999999999997643 34689999999999899999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCce
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
|++++.|++.++.+.. ..++++++|.+|.+... |.... .. .... .....+++++..+.+.+++..+..
T Consensus 159 K~~~~~~~~~~a~e~~--~~gi~v~~i~pg~i~t~-~~~~~-~~-~~~~--~~~~~~~~~~va~~~~~l~~~~~~ 226 (241)
T PRK07454 159 KAALAAFTKCLAEEER--SHGIRVCTITLGAVNTP-LWDTE-TV-QADF--DRSAMLSPEQVAQTILHLAQLPPS 226 (241)
T ss_pred HHHHHHHHHHHHHHhh--hhCCEEEEEecCcccCC-ccccc-cc-cccc--ccccCCCHHHHHHHHHHHHcCCcc
Confidence 9999999998776533 34569999999988643 32111 10 0001 112357999999999999876643
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=208.63 Aligned_cols=222 Identities=15% Similarity=0.142 Sum_probs=175.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||++|||.++|++|+++|+.++ ++.|+...++..+.+...+.++.++.||+++.+++.++++++.+.+|++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADII-ITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999998544 4455554455666666667789999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||... ..++.+.+.++|++.+++|+.+++++.+++.|.|++. ..+.||++||..+..+.++...|+++|+
T Consensus 93 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK~ 168 (258)
T PRK06935 93 DILVNNAGTIR-RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ---GSGKIINIASMLSFQGGKFVPAYTASKH 168 (258)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc---CCeEEEEECCHHhccCCCCchhhHHHHH
Confidence 99999999876 5678888999999999999999999999999998653 3467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++|++.++.+.. ..++++.+|.+|... +.|..... .......+... -+...++|....+..++..
T Consensus 169 a~~~~~~~la~e~~--~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 239 (258)
T PRK06935 169 GVAGLTKAFANELA--AYNIQVNAIAPGYIK-TANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASR 239 (258)
T ss_pred HHHHHHHHHHHHhh--hhCeEEEEEEecccc-ccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCh
Confidence 99999999987643 345688888877654 33321110 11111111112 2356788888888777653
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=206.90 Aligned_cols=222 Identities=10% Similarity=0.075 Sum_probs=174.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||++|||+++++.|+++|+..+++..+.+..+...++++..+.++.++.+|++|.+++.++++.+.+.+|++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999999865554444344455566676667789999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ..++ +.+.++|++.+++|+.|++++.+++.|+|.+. +.++||++||+++..+.++...|+++|+
T Consensus 90 d~li~~ag~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 164 (255)
T PRK06113 90 DILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN---GGGVILTITSMAAENKNINMTSYASSKA 164 (255)
T ss_pred CEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc---CCcEEEEEecccccCCCCCcchhHHHHH
Confidence 99999999865 4444 68899999999999999999999999997542 3457999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--cccchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
++++|++.++.+.. ..++++.+|.+|.+... |.... ........+...+ ....|+++.+.+..++..
T Consensus 165 a~~~~~~~la~~~~--~~~i~v~~v~pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~ 234 (255)
T PRK06113 165 AASHLVRNMAFDLG--EKNIRVNGIAPGAILTD-ALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSP 234 (255)
T ss_pred HHHHHHHHHHHHhh--hhCeEEEEEeccccccc-ccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999877643 34568889998887643 32211 1111111111111 235889999988887753
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-21 Score=200.28 Aligned_cols=180 Identities=20% Similarity=0.239 Sum_probs=159.7
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+|.+++|||.||||+++++.|+++|..++++.-|.+.. +...+|++. ..++.+++|||++..+++++++++.++||.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 89999999999999999999999999998888887764 345566655 357899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++||+||+.. + .+|++.+.+|+.|..+-....+|+|.|...++.+.||++||++|+.+.+-+..|+|+|
T Consensus 84 iDIlINgAGi~~-d--------kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsK 154 (261)
T KOG4169|consen 84 IDILINGAGILD-D--------KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASK 154 (261)
T ss_pred eEEEEccccccc-c--------hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcc
Confidence 999999999976 3 4699999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
+++-+|++++...-.-.+.+++..++++|+-.
T Consensus 155 aGVvgFTRSla~~ayy~~sGV~~~avCPG~t~ 186 (261)
T KOG4169|consen 155 AGVVGFTRSLADLAYYQRSGVRFNAVCPGFTR 186 (261)
T ss_pred cceeeeehhhhhhhhHhhcCEEEEEECCCcch
Confidence 99999999865543333446699999998765
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=207.42 Aligned_cols=223 Identities=12% Similarity=0.099 Sum_probs=175.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||.+++++|+++|++ |+++.|+. ..++..++++..+.++.++++|++|.+++.++++++.+.+|+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAK-VVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999985 66666663 334556667777788999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||......++.+.+.++|++++++|+.+++++.++++|.|.+. ..++||++||..+..+.++...|+++|
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~ii~~sS~~~~~~~~~~~~Y~~sK 161 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ---GGGAIVNTASVAGLGAAPKMSIYAASK 161 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEECchhhccCCCCCchhHHHH
Confidence 99999999986523457888999999999999999999999999987543 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccc-hhHHhhc-CCCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQT-DFYFKSS-KQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~-~~~~~~~-g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|..... ... ....... ..+..+|++..+.+..++..
T Consensus 162 aa~~~~~~~la~e~~--~~~i~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~ 234 (253)
T PRK06172 162 HAVIGLTKSAAIEYA--KKGIRVNAVCPAVID-TDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSD 234 (253)
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEEeCCcc-ChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCc
Confidence 999999999987753 346788899888765 44422110 111 0111111 11345788888888777654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=209.05 Aligned_cols=222 Identities=16% Similarity=0.105 Sum_probs=176.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|++|+++|++++ ++.|+ +..++..+.++..+.++.+++||++|+++++++++++.+.+|+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIV-FNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999998654 44555 3445556667767778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++.+.+.++|+|++. ..+.||++||.++..+.++...|+++|
T Consensus 88 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (265)
T PRK07097 88 IDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK---GHGKIINICSMMSELGRETVSAYAAAK 163 (265)
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc---CCcEEEEEcCccccCCCCCCccHHHHH
Confidence 999999999987 6788899999999999999999999999999998653 357899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--------ccchh-HHhh-cCCCCCCHHHHHHHHHHHHh
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--------EQTDF-YFKS-SKQKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--------~~~~~-~~~~-~g~~~l~~~e~~~~l~~~l~ 463 (1152)
++++.|++.++.+.. ..++++.+|.+|..... |..... ..... .... ..-...+|++....+..++.
T Consensus 164 aal~~l~~~la~e~~--~~gi~v~~v~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 240 (265)
T PRK07097 164 GGLKMLTKNIASEYG--EANIQCNGIGPGYIATP-QTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLAS 240 (265)
T ss_pred HHHHHHHHHHHHHhh--hcCceEEEEEecccccc-chhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhC
Confidence 999999999988754 34578888888876543 211100 00000 0111 11234578888888888775
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 241 ~ 241 (265)
T PRK07097 241 D 241 (265)
T ss_pred c
Confidence 4
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=207.41 Aligned_cols=221 Identities=14% Similarity=0.064 Sum_probs=171.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh----
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN---- 309 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~---- 309 (1152)
.++++|||||++|||+++|+.|+++|+.++++..|+ +..++...++...+.++.++.+|+++.+++..+++++.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 478999999999999999999999998655544444 444555666776677888999999999999999988765
Q ss_pred hcC--CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 310 NIG--PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 310 ~~G--~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
.+| ++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ .+.||++||+++..+.+++.
T Consensus 83 ~~g~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~ 156 (252)
T PRK12747 83 RTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-----NSRIINISSAATRISLPDFI 156 (252)
T ss_pred hcCCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-----CCeEEEECCcccccCCCCch
Confidence 344 8999999999865 567888999999999999999999999999999743 26799999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--cccchhHHhhc-C-CCCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSS-K-QKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~-g-~~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|.... ........+.. . -+...|++..+.+..++.
T Consensus 157 ~Y~~sKaa~~~~~~~la~e~~--~~girvn~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 233 (252)
T PRK12747 157 AYSMTKGAINTMTFTLAKQLG--ARGITVNAILPGFIK-TDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLAS 233 (252)
T ss_pred hHHHHHHHHHHHHHHHHHHHh--HcCCEEEEEecCCcc-CchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcC
Confidence 999999999999999887643 345688889887664 4443211 01111111111 1 134678999888877765
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 234 ~ 234 (252)
T PRK12747 234 P 234 (252)
T ss_pred c
Confidence 3
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-20 Score=208.21 Aligned_cols=222 Identities=14% Similarity=0.093 Sum_probs=174.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||.+++++|+++|+ +|++++|+. ..++..+.++..+.++.++.+|+++++++.++++++.+.+|+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999998 666667763 334555666666778899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ...+.+.+.++|+..+.+|+.|++++.+++.|+|.+.. ..+.||++||+.+..+.+++..|+++|
T Consensus 88 id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~~sS~~~~~~~~~~~~Y~~sK 164 (263)
T PRK07814 88 LDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHS--GGGSVINISSTMGRLAGRGFAAYGTAK 164 (263)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhc--CCeEEEEEccccccCCCCCCchhHHHH
Confidence 999999999876 66788899999999999999999999999999986532 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc---ccccchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..+++.+|.+|..... |... .............+ ...++++..+.+..++..
T Consensus 165 ~a~~~~~~~~~~e~~---~~i~v~~i~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 235 (263)
T PRK07814 165 AALAHYTRLAALDLC---PRIRVNAIAPGSILTS-ALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASP 235 (263)
T ss_pred HHHHHHHHHHHHHHC---CCceEEEEEeCCCcCc-hhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999999988753 2467888887665432 2111 11111111111122 235788898888887753
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-20 Score=207.07 Aligned_cols=227 Identities=20% Similarity=0.207 Sum_probs=171.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCC---CcEEEEEecCCCHHHHHHHHHHHHhh-
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN---NKAIYIQVDVSDKLKMISEINSIINN- 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g---~~v~~~~~Dvsd~~~v~~~~~~~~~~- 310 (1152)
.++++|||||++|||+++|+.|++.|++++|..++.+..++..+++...+ .++..+.||++++++++++++...++
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999965555544455566666665544 46999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchH-HHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC-hh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISG-TIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS-CD 388 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g-~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~-~~ 388 (1152)
+|+||.+|||||......++.+.+.|+|++++++|+.| .+.+.+.+.+++++ ...+.|+++||+++..+.+++ ..
T Consensus 87 ~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~---~~gg~I~~~ss~~~~~~~~~~~~~ 163 (270)
T KOG0725|consen 87 FGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKK---SKGGSIVNISSVAGVGPGPGSGVA 163 (270)
T ss_pred CCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHh---cCCceEEEEeccccccCCCCCccc
Confidence 79999999999998744479999999999999999996 66666776666543 345679999999999887777 79
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc----ccchhH--Hhhc--CCCCCCHHHHHHHHHH
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN----EQTDFY--FKSS--KQKVLHENDGLKLFEQ 460 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~----~~~~~~--~~~~--g~~~l~~~e~~~~l~~ 460 (1152)
|+++|+++++|++.+..+.. ..++++.+|++|............ ...... .+.. --+...++|.+.....
T Consensus 164 Y~~sK~al~~ltr~lA~El~--~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~f 241 (270)
T KOG0725|consen 164 YGVSKAALLQLTRSLAKELA--KHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAF 241 (270)
T ss_pred chhHHHHHHHHHHHHHHHHh--hcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHh
Confidence 99999999999999887755 445688888887665432111100 111000 0001 1234678888888777
Q ss_pred HHhcCc
Q psy616 461 LLIQDK 466 (1152)
Q Consensus 461 ~l~~~~ 466 (1152)
+...+.
T Consensus 242 la~~~a 247 (270)
T KOG0725|consen 242 LASDDA 247 (270)
T ss_pred hcCccc
Confidence 665543
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=207.43 Aligned_cols=224 Identities=14% Similarity=0.119 Sum_probs=175.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++|||+++|++|+++|++++ +..|+. ......++++..+.++.++.+|++|.+++.++++.+.+.+|
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vv-i~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVV-INYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999998554 445542 23445666776788899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||... ..++.+.+.++|++.+++|+.+++++.+.+++.|++. ...+.||++||+.+..+.+++..|+++
T Consensus 85 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~Y~~s 161 (261)
T PRK08936 85 TLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEH--DIKGNIINMSSVHEQIPWPLFVHYAAS 161 (261)
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCcEEEEEccccccCCCCCCcccHHH
Confidence 9999999999876 6678889999999999999999999999999998653 224689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch---hHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD---FYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~---~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|++++.|++.++.+.. ..++++.+|.+|... +.|......... ....... -...++++..+.+..++...
T Consensus 162 Kaa~~~~~~~la~e~~--~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 235 (261)
T PRK08936 162 KGGVKLMTETLAMEYA--PKGIRVNNIGPGAIN-TPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE 235 (261)
T ss_pred HHHHHHHHHHHHHHHh--hcCeEEEEEEECcCC-CCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 9999999999877654 345788888887654 444321100001 0111111 13457889999888877643
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-20 Score=205.42 Aligned_cols=185 Identities=15% Similarity=0.093 Sum_probs=155.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC-
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG- 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G- 312 (1152)
.+++++||||++|||+++|+.|+++|++ |++.+|+ +..++..++++..+.++..+.||++|+++++++++++.+++|
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~-V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGAT-LILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999985 5566665 344556666777777888999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||++|||||......++.+.+.++|.+++..|+.+++.+.+.+.|+|++.. ..+.||++||..+. ++...|+++
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~--~~g~Iv~isS~~~~---~~~~~Y~as 157 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRN--KKGVIVNVISHDDH---QDLTGVESS 157 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCceEEEEecCCCC---CCcchhHHH
Confidence 9999999998654245788899999999999999999999999999986432 34689999997654 567889999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 427 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 427 (1152)
|+++.+|++.++.+.. ..++++.+|++|+....
T Consensus 158 Kaal~~~~~~la~el~--~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 158 NALVSGFTHSWAKELT--PFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHHHHHHHHHHh--hcCcEEEEEecCcCcCC
Confidence 9999999999988754 44678999999877543
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=207.98 Aligned_cols=219 Identities=13% Similarity=0.106 Sum_probs=165.4
Q ss_pred CCCEEEEECC--chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg--~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++||||| ++|||+++|+.|+++|+ +|++.+|+... +..+++. ..+.++.+++||++|+++++++++++.+++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRAL-RLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccch-hHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4789999999 89999999999999998 56666665321 1222222 234467789999999999999999999999
Q ss_pred CCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 312 GPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 312 G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
|+||++|||||+... ...+.+.+.++|++++++|+.|++++.++++|+|++ .+.||++||. +..+.++++.
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-----~g~Iv~is~~-~~~~~~~~~~ 157 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-----GGSIVGLDFD-ATVAWPAYDW 157 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-----CceEEEEeec-ccccCCccch
Confidence 999999999998641 135678899999999999999999999999999752 2568998875 4556778889
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcCC--CCCCHHHHHHHHHHHHh
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ--KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~--~~l~~~e~~~~l~~~l~ 463 (1152)
|+++|+++.+|++.++.+.. ..++++.+|.+|.+.. .|..... .......+...+ +..+|+|..+.+..++.
T Consensus 158 Y~asKaal~~l~~~la~el~--~~gIrvn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s 234 (256)
T PRK07889 158 MGVAKAALESTNRYLARDLG--PRGIRVNLVAAGPIRT-LAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLS 234 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhh--hcCeEEEeeccCcccC-hhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhC
Confidence 99999999999999988754 3467889999887754 4432111 101111111222 34689999999998876
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 235 ~ 235 (256)
T PRK07889 235 D 235 (256)
T ss_pred c
Confidence 4
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=213.05 Aligned_cols=224 Identities=13% Similarity=0.031 Sum_probs=170.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-----------chHHHHHHHHhCCCcEEEEEecCCCHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-----------LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISE 303 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-----------~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~ 303 (1152)
+++++|||||++|||+++|+.|+++|+ +|++++|+. ..++..++++..+.++.+++||++|+++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 579999999999999999999999998 455566652 23445566766777888999999999999999
Q ss_pred HHHHHhhcCCeeEEEEcc-cccC---cCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcc
Q psy616 304 INSIINNIGPIDGVLHIA-GISG---LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA 379 (1152)
Q Consensus 304 ~~~~~~~~G~idgvIh~A-G~~~---~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~ 379 (1152)
++++.++||+||++|||| |+.. ...++.+.+.++|.+++++|+.+++.+.++++|+|++. ..+.||++||.++
T Consensus 86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~---~~g~IV~isS~~~ 162 (305)
T PRK08303 86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR---PGGLVVEITDGTA 162 (305)
T ss_pred HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC---CCcEEEEECCccc
Confidence 999999999999999999 8531 12567788999999999999999999999999998642 2468999999876
Q ss_pred cc---CCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc----cccchhHHhhcC--CCCCC
Q psy616 380 IL---GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN----NEQTDFYFKSSK--QKVLH 450 (1152)
Q Consensus 380 ~~---g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~----~~~~~~~~~~~g--~~~l~ 450 (1152)
.. +.++...|+++|+++.+|++.++.+.. ..++++.+|.+|.. .+.|.... ............ ....+
T Consensus 163 ~~~~~~~~~~~~Y~asKaal~~lt~~La~el~--~~gIrVn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 239 (305)
T PRK08303 163 EYNATHYRLSVFYDLAKTSVNRLAFSLAHELA--PHGATAVALTPGWL-RSEMMLDAFGVTEENWRDALAKEPHFAISET 239 (305)
T ss_pred cccCcCCCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEecCCcc-ccHHHHHhhccCccchhhhhccccccccCCC
Confidence 54 234678899999999999999988754 44678899988755 45553210 000001111111 12346
Q ss_pred HHHHHHHHHHHHhcC
Q psy616 451 ENDGLKLFEQLLIQD 465 (1152)
Q Consensus 451 ~~e~~~~l~~~l~~~ 465 (1152)
|++...++..++...
T Consensus 240 peevA~~v~fL~s~~ 254 (305)
T PRK08303 240 PRYVGRAVAALAADP 254 (305)
T ss_pred HHHHHHHHHHHHcCc
Confidence 999999988877644
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-20 Score=207.45 Aligned_cols=224 Identities=13% Similarity=0.098 Sum_probs=178.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++||||++|||.+++++|+++|+ +|++++|+ +..++..++++..+.++.++.||++|++++.++++++...+|+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 589999999999999999999999998 56666766 3445566667777778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ..++.+.+.++|++.+.+|+.|++++.+.+++.|.+. ..++||++||..+..+.+++..|+++|
T Consensus 89 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~~ss~~~~~~~~~~~~Y~~sK 164 (256)
T PRK06124 89 LDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ---GYGRIIAITSIAGQVARAGDAVYPAAK 164 (256)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEEeechhccCCCCccHhHHHH
Confidence 999999999876 6778899999999999999999999999999997543 356899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-cccchhHHh-hcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFYFK-SSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~~~-~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.+++.++.+.. ..++++.+|.+|.+......... .......+. ... -....+++....+..++...
T Consensus 165 ~a~~~~~~~la~e~~--~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~ 237 (256)
T PRK06124 165 QGLTGLMRALAAEFG--PHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPA 237 (256)
T ss_pred HHHHHHHHHHHHHHH--HhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 999999999877632 33568889988887654321100 111111111 111 13467889888888877543
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=212.49 Aligned_cols=222 Identities=14% Similarity=0.092 Sum_probs=165.8
Q ss_pred CCCEEEEECC--chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh--------C--CC---cEEEEEecC--CC-
Q psy616 235 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK--------F--NN---KAIYIQVDV--SD- 296 (1152)
Q Consensus 235 ~~~~~LITGg--~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~--------~--g~---~v~~~~~Dv--sd- 296 (1152)
.+|++||||+ ++|||+++|+.|+++|+++++ ..+.+..++....+++ . +. ...++.+|+ ++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 86 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTP 86 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCcc
Confidence 5899999999 899999999999999985544 4444545554444432 1 11 146788999 43
Q ss_pred -----------------HHHHHHHHHHHHhhcCCeeEEEEcccccC-cCcccccCCHHHHHHHHhhhchHHHHHHHHHHH
Q psy616 297 -----------------KLKMISEINSIINNIGPIDGVLHIAGISG-LTSNILEANYKNFYSVLSSKISGTIALNYALEN 358 (1152)
Q Consensus 297 -----------------~~~v~~~~~~~~~~~G~idgvIh~AG~~~-~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p 358 (1152)
+++++++++++.++||+||+||||||+.. ...++.+.+.++|++++++|+.|++.+.++++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p 166 (303)
T PLN02730 87 EDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGP 166 (303)
T ss_pred ccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 44899999999999999999999998643 136788999999999999999999999999999
Q ss_pred HHHHhcCCCCCEEEEecCCccccCCCCC-hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc
Q psy616 359 TILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT 437 (1152)
Q Consensus 359 ~m~~~~~~~~~~iV~~SS~a~~~g~~g~-~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~ 437 (1152)
+|++ .+.||++||+++..+.++. +.|+++|+++.+|++.++.+... ..++++.+|.+|... +.|........
T Consensus 167 ~m~~-----~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~-~~gIrVn~V~PG~v~-T~~~~~~~~~~ 239 (303)
T PLN02730 167 IMNP-----GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGR-KYKIRVNTISAGPLG-SRAAKAIGFID 239 (303)
T ss_pred HHhc-----CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCc-CCCeEEEEEeeCCcc-CchhhcccccH
Confidence 9853 1789999999999888876 58999999999999999987531 146788899888664 44543211000
Q ss_pred h---hHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 438 D---FYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 438 ~---~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
. ....... -+...|++....+..++..
T Consensus 240 ~~~~~~~~~~pl~r~~~peevA~~~~fLaS~ 270 (303)
T PLN02730 240 DMIEYSYANAPLQKELTADEVGNAAAFLASP 270 (303)
T ss_pred HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 0 0011111 1335788988888887753
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=212.80 Aligned_cols=221 Identities=14% Similarity=0.086 Sum_probs=171.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc---chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK---LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~---~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||++|||+++|+.|+++|+.++ +..++. ..++..+.++..+.++.++.||++|.++++++++++.+.+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIA-LNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEE-EEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 468999999999999999999999998554 444432 2234556667778889999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||.......+.+.+.++|++++++|+.|++++.+++.|+|++ .++||++||+.+..+.+++..|++
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~Y~a 207 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP-----GASIINTGSIQSYQPSPTLLDYAS 207 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc-----CCEEEEECCccccCCCCCchhHHH
Confidence 999999999998542456888999999999999999999999999998642 357999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+|++++.|++.++.+.. ..++++.+|.+|.... -|..... ...........+ +...++|...++..++..
T Consensus 208 sK~a~~~~~~~la~el~--~~gI~v~~v~PG~i~t-~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~ 281 (300)
T PRK06128 208 TKAAIVAFTKALAKQVA--EKGIRVNAVAPGPVWT-PLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQ 281 (300)
T ss_pred HHHHHHHHHHHHHHHhh--hcCcEEEEEEECcCcC-CCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999999987643 3456888888776643 3322111 111111111111 345788888888776653
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-20 Score=208.03 Aligned_cols=217 Identities=12% Similarity=0.130 Sum_probs=167.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|++|+++|+ +|++++|+.. .++..+ ..+.++.+++||++|++++.++++++.+.+|+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAA---SLGERARFIATDITDDAAIERAVATVVARFGR 80 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---HhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999998 5666677642 233322 33567889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ... .+.+.++|++++++|+.+++++.+++.|.|+ .+.+.||++||.++..+.++...|+++|
T Consensus 81 id~lv~~ag~~~-~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~~~~~Y~asK 154 (261)
T PRK08265 81 VDILVNLACTYL-DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA----RGGGAIVNFTSISAKFAQTGRWLYPASK 154 (261)
T ss_pred CCEEEECCCCCC-CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh----cCCcEEEEECchhhccCCCCCchhHHHH
Confidence 999999999865 333 3678999999999999999999999999975 2346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-c---hhHHh-hcCC-CCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-T---DFYFK-SSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~---~~~~~-~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++.+|.+|... +.|....... . ..... ...+ +..+|++..+.+..++..
T Consensus 155 aa~~~~~~~la~e~~--~~gi~vn~v~PG~~~-t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~ 228 (261)
T PRK08265 155 AAIRQLTRSMAMDLA--PDGIRVNSVSPGWTW-SRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSD 228 (261)
T ss_pred HHHHHHHHHHHHHhc--ccCEEEEEEccCCcc-ChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCc
Confidence 999999999987643 346788888877543 3332111100 0 00110 0111 235789999999888754
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-20 Score=207.51 Aligned_cols=223 Identities=13% Similarity=0.113 Sum_probs=172.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||++++++|+++|++ |+++.|+... .+.+. ..+.++.++.+|++|.+++.++++.+.+.+|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~---~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHR-VVGTVRSEAA---RADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCE-EEEEeCCHHH---HHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4688999999999999999999999885 6666665422 12222 23456888999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ..++.+.+.++|++++++|+.|++++.++++|+|++. ..++||++||+++..+.++++.|+++|
T Consensus 79 ~d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~---~~~~iv~iSS~~~~~~~~~~~~Y~~sK 154 (277)
T PRK06180 79 IDVLVNNAGYGH-EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR---RRGHIVNITSMGGLITMPGIGYYCGSK 154 (277)
T ss_pred CCEEEECCCccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc---CCCEEEEEecccccCCCCCcchhHHHH
Confidence 999999999876 6788899999999999999999999999999997543 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccC----cccccccc--ccchh--------HHhhcCCCCCCHHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN----SKFKIGNN--EQTDF--------YFKSSKQKVLHENDGLKLFE 459 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~----~Gm~~~~~--~~~~~--------~~~~~g~~~l~~~e~~~~l~ 459 (1152)
+++++|++.++.+.. ..++++++|.||.+.. .+|..... ..... .....+....+++++++++.
T Consensus 155 ~a~~~~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 232 (277)
T PRK06180 155 FALEGISESLAKEVA--PFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAIL 232 (277)
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHH
Confidence 999999988876532 2356888999886532 22211000 00000 01123445678899999998
Q ss_pred HHHhcCce
Q psy616 460 QLLIQDKI 467 (1152)
Q Consensus 460 ~~l~~~~~ 467 (1152)
.++..+.+
T Consensus 233 ~~l~~~~~ 240 (277)
T PRK06180 233 AAVESDEP 240 (277)
T ss_pred HHHcCCCC
Confidence 88876644
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.8e-20 Score=205.25 Aligned_cols=224 Identities=12% Similarity=0.099 Sum_probs=177.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||.+++++|+++|+ +|++++|+ ...+.+.+++...+.++.++++|++|.++++++++++.+.+|+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999998 56666665 3445566667666778889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||......++.+.+.++|++.+++|+.|++++.++++|+|++ ...++||++||+.+..+.++++.|+++|
T Consensus 86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 162 (252)
T PRK07035 86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKE---QGGGSIVNVASVNGVSPGDFQGIYSITK 162 (252)
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---CCCcEEEEECchhhcCCCCCCcchHHHH
Confidence 9999999997542356778899999999999999999999999999754 2456899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.|++.++.+.. ..++++.+|.+|... +.|....... .........+ +..+|+|..+.+..++...
T Consensus 163 ~al~~~~~~l~~e~~--~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 235 (252)
T PRK07035 163 AAVISMTKAFAKECA--PFGIRVNALLPGLTD-TKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDA 235 (252)
T ss_pred HHHHHHHHHHHHHHh--hcCEEEEEEeecccc-CcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCcc
Confidence 999999999987643 346788999988774 4443221111 0111111112 3568999999998877543
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.2e-20 Score=203.54 Aligned_cols=226 Identities=13% Similarity=0.140 Sum_probs=171.0
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++||||||+||||.+++++|+++|+.++++..|++ ..+.....++..+.++.+++||++|.+++.++++++.+++|++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999986554443442 2334455566667788899999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC-hhhhHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGN 393 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~-~~Yaaan 393 (1152)
|+||||||.......+.+.+.++|++++++|+.|++++.+++.+.|.+......++||++||.++..+.++. ..|+++|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK 161 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence 999999998752346778899999999999999999999999999865333334689999999999988874 6899999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc--chhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++.+|.++.+... |....... .........+ ...++++..+.+..++..
T Consensus 162 aa~~~~~~~la~~~~--~~~i~v~~i~pg~v~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~ 232 (248)
T PRK06123 162 GAIDTMTIGLAKEVA--AEGIRVNAVRPGVIYTE-IHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSD 232 (248)
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEecCcccCc-hhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999998877643 34568999999877543 32111000 0001111111 123678888888776653
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-20 Score=205.17 Aligned_cols=220 Identities=15% Similarity=0.140 Sum_probs=171.8
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
+|||||++|||.++|++|+++|+.++++..+. +..+...++++..+.++.++++|++|.+++.++++++.+.+|++|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999999998654444443 33455666777778889999999999999999999999999999999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHH-HHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHH
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALE-NTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 396 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~-p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l 396 (1152)
|||||+.. ...+.+.+.++|+.++++|+.|++++.++++ |.+++ .+.++||++||.++..|.+++..|+++|+++
T Consensus 81 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 156 (239)
T TIGR01831 81 VLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRA---RQGGRIITLASVSGVMGNRGQVNYSAAKAGL 156 (239)
T ss_pred EECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh---cCCeEEEEEcchhhccCCCCCcchHHHHHHH
Confidence 99999877 6678888999999999999999999998875 44332 2346899999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 397 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 397 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+.|++.++.+.. +.++++.+|.+|.+. +.|............+...+ +..++++..+.+..++...
T Consensus 157 ~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 223 (239)
T TIGR01831 157 IGATKALAVELA--KRKITVNCIAPGLID-TEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDG 223 (239)
T ss_pred HHHHHHHHHHHh--HhCeEEEEEEEccCc-cccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCch
Confidence 999998877643 335688888777664 55543222211122222333 2457899999888877643
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.4e-20 Score=206.67 Aligned_cols=224 Identities=11% Similarity=0.084 Sum_probs=175.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCc-EEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNK-AIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~-v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++||||+||||+++|++|+++|+. |++++|+. ..++..++++..+.. +.++++|++|++++.++++++.+.++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAE-LFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 47999999999999999999999975 66667763 334455666655554 4568999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ...+.+.+.++|+.++++|+.|++++.++++|.|.+. ...++||++||..+..+.++...|+++|+
T Consensus 80 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~g~ii~isS~~~~~~~~~~~~Y~~sK~ 156 (272)
T PRK07832 80 DVVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAA--GRGGHLVNVSSAAGLVALPWHAAYSASKF 156 (272)
T ss_pred CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCcEEEEEccccccCCCCCCcchHHHHH
Confidence 99999999876 6678899999999999999999999999999998542 23468999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc-------ccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-------NNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-------~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
++++|++.++.+.. ..+++++.|.+|......+... ................+++++.++.+..++..+.
T Consensus 157 a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~ 233 (272)
T PRK07832 157 GLRGLSEVLRFDLA--RHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEKNR 233 (272)
T ss_pred HHHHHHHHHHHHhh--hcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhcCC
Confidence 99999998886533 3457888998887754333210 0000111111122246899999999999986554
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-20 Score=209.97 Aligned_cols=223 Identities=14% Similarity=0.149 Sum_probs=169.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|++|+++|++ |++++|+. ..++..+++. .+.++.++++|++|.++++++++.+.+++|+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~-v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAK-VCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999985 55555553 3334444443 2457889999999999999999999999999
Q ss_pred eeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+|+||||||.... ...+.+.+.++|++++++|+.|++++.+++.|.|.+. ..++||++||.++..+.++...|+++
T Consensus 95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~ii~isS~~~~~~~~~~~~Y~~s 171 (280)
T PLN02253 95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL---KKGSIVSLCSVASAIGGLGPHAYTGS 171 (280)
T ss_pred CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc---CCceEEEecChhhcccCCCCcccHHH
Confidence 9999999998641 2457788999999999999999999999999997542 34679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc--chhH-------Hh-hc--CCCCCCHHHHHHHHHH
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--TDFY-------FK-SS--KQKVLHENDGLKLFEQ 460 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~~~~-------~~-~~--g~~~l~~~e~~~~l~~ 460 (1152)
|++++.|++.++.+.. ..++++.+|+.|......+....... .... .. .. ......++|...++..
T Consensus 172 K~a~~~~~~~la~e~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~ 249 (280)
T PLN02253 172 KHAVLGLTRSVAAELG--KHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLF 249 (280)
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHh
Confidence 9999999999887643 33568888888766443211100000 0000 00 01 1124689999999988
Q ss_pred HHhc
Q psy616 461 LLIQ 464 (1152)
Q Consensus 461 ~l~~ 464 (1152)
++..
T Consensus 250 l~s~ 253 (280)
T PLN02253 250 LASD 253 (280)
T ss_pred hcCc
Confidence 7754
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.4e-20 Score=207.53 Aligned_cols=219 Identities=12% Similarity=0.071 Sum_probs=173.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc--------hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--------NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS 306 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~--------~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 306 (1152)
.++++|||||++|||.++|++|+++|+. |++++|+.. .++..++++..+.++.++++|+++.+++.+++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGAN-IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 4689999999999999999999999984 555566532 2334456666788899999999999999999999
Q ss_pred HHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC--C
Q psy616 307 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--F 384 (1152)
Q Consensus 307 ~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~--~ 384 (1152)
+.+.+|++|+||||||... ..++.+.+.++|++++++|+.|++++.+++.|+|++. ..+.||++||..+..+. +
T Consensus 84 ~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~~ 159 (273)
T PRK08278 84 AVERFGGIDICVNNASAIN-LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS---ENPHILTLSPPLNLDPKWFA 159 (273)
T ss_pred HHHHhCCCCEEEECCCCcC-CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc---CCCEEEEECCchhccccccC
Confidence 9999999999999999876 6678889999999999999999999999999998653 33579999999888776 8
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+...|+++|++++.|++.++.+.. ..++++.+|.++.+-++.+....... . ...-...++++..+.+..++..
T Consensus 160 ~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v~~i~Pg~~i~t~~~~~~~~~-~----~~~~~~~~p~~va~~~~~l~~~ 232 (273)
T PRK08278 160 PHTAYTMAKYGMSLCTLGLAEEFR--DDGIAVNALWPRTTIATAAVRNLLGG-D----EAMRRSRTPEIMADAAYEILSR 232 (273)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEEeCCCccccHHHHhcccc-c----ccccccCCHHHHHHHHHHHhcC
Confidence 889999999999999999987754 34678888877755444322111000 0 0011346899999999988865
Q ss_pred C
Q psy616 465 D 465 (1152)
Q Consensus 465 ~ 465 (1152)
.
T Consensus 233 ~ 233 (273)
T PRK08278 233 P 233 (273)
T ss_pred c
Confidence 4
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.2e-20 Score=204.52 Aligned_cols=223 Identities=12% Similarity=0.060 Sum_probs=177.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||++++++|+++|+.++++..|+. ..++..++++..+.++.++.+|++|++++.++++++.+.+|+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999987776666653 345566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ..++.+.+.++|+..+++|+.+++++.+++.|.|++. +.+.||++||+.+..+.++...|+++|
T Consensus 83 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~~sS~~~~~~~~~~~~y~~sK 158 (250)
T PRK08063 83 LDVFVNNAASGV-LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV---GGGKIISLSSLGSIRYLENYTTVGVSK 158 (250)
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCeEEEEEcchhhccCCCCccHHHHHH
Confidence 999999999876 6778889999999999999999999999999997643 346799999999888888899999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchh--HHh-h-cCCCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF--YFK-S-SKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~--~~~-~-~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++++|.+|.....+ .......... ... . ..-..+++++..+.+..++..
T Consensus 159 ~a~~~~~~~~~~~~~--~~~i~v~~i~pg~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 230 (250)
T PRK08063 159 AALEALTRYLAVELA--PKGIAVNAVSGGAVDTDA-LKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSP 230 (250)
T ss_pred HHHHHHHHHHHHHHh--HhCeEEEeEecCcccCch-hhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999998876543 345688899988775433 2111110000 011 1 111357889999998887754
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.1e-20 Score=205.01 Aligned_cols=222 Identities=18% Similarity=0.130 Sum_probs=174.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||++|||+++|++|+++|+. |++++|+....+..+++...+.++.+++||++++++++++++++.++++++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGAN-LILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999985 677777765455556666667788999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcc-ccCCCCChhhhHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA-ILGDFGSCDYAMGN 393 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~-~~g~~g~~~Yaaan 393 (1152)
|+||||||... ...+.+.+.++|++++++|+.|++.+.+.+.|+|++. ..+.||++||.++ ..+.+++..|+++|
T Consensus 84 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~~Y~~sK 159 (263)
T PRK08226 84 DILVNNAGVCR-LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR---KDGRIVMMSSVTGDMVADPGETAYALTK 159 (263)
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc---CCcEEEEECcHHhcccCCCCcchHHHHH
Confidence 99999999876 6778888999999999999999999999999987542 3457999999888 46778899999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----ccc----hhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----EQT----DFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----~~~----~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|..... ... ....+...+ +..++++..+.+..++.
T Consensus 160 ~a~~~~~~~la~~~~--~~~i~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~ 236 (263)
T PRK08226 160 AAIVGLTKSLAVEYA--QSGIRVNAICPGYVR-TPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLAS 236 (263)
T ss_pred HHHHHHHHHHHHHhc--ccCcEEEEEecCccc-CHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcC
Confidence 999999999887643 345789999998664 44422110 000 111111111 13478888888877764
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 237 ~ 237 (263)
T PRK08226 237 D 237 (263)
T ss_pred c
Confidence 3
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-20 Score=203.11 Aligned_cols=227 Identities=13% Similarity=0.106 Sum_probs=174.0
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||++|||..+|++|+++|+.++++.+|+. ..+.....++..+.++.+++||++|.++++++++++.+.++++|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 68999999999999999999999986655555553 33445556666677899999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-ChhhhHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-SCDYAMGNR 394 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g-~~~Yaaana 394 (1152)
+||||||.......+.+.+.++|+.++++|+.|++++.+.+.+.|.+....+.++||++||.++..|.++ ...|+++|+
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK~ 162 (248)
T PRK06947 83 ALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKG 162 (248)
T ss_pred EEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhHH
Confidence 9999999865235677889999999999999999999999998876433334578999999999988775 578999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHH-hhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-KSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++.|++.++.+.. ..++++++|.+|.+....+............ .... -...++++..+.+..++...
T Consensus 163 ~~~~~~~~la~~~~--~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~ 233 (248)
T PRK06947 163 AVDTLTLGLAKELG--PHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDA 233 (248)
T ss_pred HHHHHHHHHHHHhh--hhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 99999999887642 3456899999997764322111011000011 1111 23468899999988876543
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.4e-20 Score=204.83 Aligned_cols=226 Identities=12% Similarity=0.154 Sum_probs=174.9
Q ss_pred cccCCCEEEEECCch-hHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHh-CC-CcEEEEEecCCCHHHHHHHHHHH
Q psy616 232 YIKQGGTYLITGGTG-RLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKK-FN-NKAIYIQVDVSDKLKMISEINSI 307 (1152)
Q Consensus 232 ~~~~~~~~LITGg~g-GIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~-~g-~~v~~~~~Dvsd~~~v~~~~~~~ 307 (1152)
.+.+++++|||||+| |||+++++.|+++|+. |+++.|+. ..++..++++. .+ .++.++++|++++++++++++++
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGAR-VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 455789999999986 9999999999999986 55556653 33455555654 34 46889999999999999999999
Q ss_pred HhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 308 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 308 ~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
.+.+|++|+||||||... ...+.+.+.++|++++++|+.|++.+.+++.|.|++.. ..+.||++||+.+..+.++..
T Consensus 92 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~~ss~~~~~~~~~~~ 168 (262)
T PRK07831 92 VERLGRLDVLVNNAGLGG-QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARG--HGGVIVNNASVLGWRAQHGQA 168 (262)
T ss_pred HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCcEEEEeCchhhcCCCCCCc
Confidence 999999999999999876 67788899999999999999999999999999986432 246899999999999989999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-ccc-chhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
.|+++|+++++|++.++.+.. ..++++.+|.+|.... .|.... ... .....+... .+..+|++..+.+..++..
T Consensus 169 ~Y~~sKaal~~~~~~la~e~~--~~gI~v~~i~Pg~~~t-~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~ 245 (262)
T PRK07831 169 HYAAAKAGVMALTRCSALEAA--EYGVRINAVAPSIAMH-PFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASD 245 (262)
T ss_pred chHHHHHHHHHHHHHHHHHhC--ccCeEEEEEeeCCccC-cccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999999999999987643 3456888888876643 332111 111 111111111 2345788998888886653
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.2e-20 Score=204.09 Aligned_cols=217 Identities=15% Similarity=0.174 Sum_probs=167.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||.++|++|+++|+ +|+++.|+.. .++. .+..+.++.++++|++|.++++++++++.+++|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKV---AKALGENAWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHH---HHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 579999999999999999999999997 5555555532 2222 2233567889999999999999999999999999
Q ss_pred eeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+|+||||||.... ..++.+.+.++|++++++|+.|++++.+++.|+|.+. .++||++||.++..+.+++..|+++
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~ii~~sS~~~~~~~~~~~~Y~~s 160 (255)
T PRK05717 85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH----NGAIVNLASTRARQSEPDTEAYAAS 160 (255)
T ss_pred CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc----CcEEEEEcchhhcCCCCCCcchHHH
Confidence 9999999998642 2567788999999999999999999999999997542 3679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-ccchhHH--hhcCCCCCCHHHHHHHHHHHHh
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQTDFYF--KSSKQKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~~~~~~--~~~g~~~l~~~e~~~~l~~~l~ 463 (1152)
|++++.|++.+..+.. .++++.+|.+|.... .|..... ....... +...-+..++++....+..++.
T Consensus 161 Kaa~~~~~~~la~~~~---~~i~v~~i~Pg~i~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 230 (255)
T PRK05717 161 KGGLLALTHALAISLG---PEIRVNAVSPGWIDA-RDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLS 230 (255)
T ss_pred HHHHHHHHHHHHHHhc---CCCEEEEEecccCcC-CccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC
Confidence 9999999999877642 247888888776644 3322110 0000000 1111234678888888877764
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-20 Score=204.75 Aligned_cols=220 Identities=12% Similarity=0.107 Sum_probs=171.7
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcc------------hHHHHHHHHhCCCcEEEEEecCCCHHHH
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKL------------NSIIYKKLKKFNNKAIYIQVDVSDKLKM 300 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~------------~~~~~~~l~~~g~~v~~~~~Dvsd~~~v 300 (1152)
.++++|||||+ +|||.++|++|+++|+ +|++++|++. .....+.+...+.++.++.+|+++.+++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGI-DIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCC-cEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 46899999998 4999999999999998 5666666511 1123445556677899999999999999
Q ss_pred HHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc
Q psy616 301 ISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI 380 (1152)
Q Consensus 301 ~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~ 380 (1152)
.++++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|++++.+++.+.|.+ ...++||++||..+.
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~ss~~~~ 158 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYST-HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDG---KAGGRIINLTSGQSL 158 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhh---cCCeEEEEECCcccc
Confidence 9999999999999999999999876 677888999999999999999999999999998743 234689999999998
Q ss_pred cCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHh-hcCCCCCCHHHHHHHHH
Q psy616 381 LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFK-SSKQKVLHENDGLKLFE 459 (1152)
Q Consensus 381 ~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~-~~g~~~l~~~e~~~~l~ 459 (1152)
.+.++...|+++|++++.|++.++.+.. ..++++++|.||.+....+. . ........ .......++++..+.+.
T Consensus 159 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~i~Pg~~~t~~~~-~--~~~~~~~~~~~~~~~~~~~~~a~~~~ 233 (256)
T PRK12748 159 GPMPDELAYAATKGAIEAFTKSLAPELA--EKGITVNAVNPGPTDTGWIT-E--ELKHHLVPKFPQGRVGEPVDAARLIA 233 (256)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHH--HhCeEEEEEEeCcccCCCCC-h--hHHHhhhccCCCCCCcCHHHHHHHHH
Confidence 8888999999999999999998877632 34568999999988643222 1 10000111 11122457888888888
Q ss_pred HHHhc
Q psy616 460 QLLIQ 464 (1152)
Q Consensus 460 ~~l~~ 464 (1152)
.++..
T Consensus 234 ~l~~~ 238 (256)
T PRK12748 234 FLVSE 238 (256)
T ss_pred HHhCc
Confidence 76654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.9e-20 Score=205.10 Aligned_cols=222 Identities=11% Similarity=0.093 Sum_probs=173.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+|++|||||++|||.+++++|+++|+. |++++|+. ..++..+++... +.++.++.||+++++++.++++++.+.+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGAD-VLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5799999999999999999999999984 66666653 334455556554 6789999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||... ..++.+.+.++|++++.+|+.|++++.+++.|+|++. +.++||++||.++..+.++.+.|++
T Consensus 87 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~ii~~sS~~~~~~~~~~~~Y~~ 162 (257)
T PRK09242 87 DGLHILVNNAGGNI-RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH---ASSAIVNIGSVSGLTHVRSGAPYGM 162 (257)
T ss_pred CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc---CCceEEEECccccCCCCCCCcchHH
Confidence 99999999999866 6678889999999999999999999999999998653 3468999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+|++++.|++.++.+.. ..++++.+|.+|... +.|.... ............+ ...++++...++..++..
T Consensus 163 sK~a~~~~~~~la~e~~--~~~i~v~~i~Pg~i~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 236 (257)
T PRK09242 163 TKAALLQMTRNLAVEWA--EDGIRVNAVAPWYIR-TPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMP 236 (257)
T ss_pred HHHHHHHHHHHHHHHHH--HhCeEEEEEEECCCC-CcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999998876643 345688888877654 3332211 0111111111222 234788888888877753
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.2e-20 Score=201.56 Aligned_cols=216 Identities=17% Similarity=0.095 Sum_probs=165.9
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+++|||||++|||+++|++|+++|+ +|++++|++. ...+.++..+ +.++.+|++|.++++++++++.+.+|++|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id 76 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHY--PAIDGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGLR 76 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCch--hHHHHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence 47899999999999999999999998 5555566542 2234455444 56789999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
++|||||... .....+.+.++|++++++|+.+++.+.+.+.|.|++.. ...+.||++||..+..+.+++..|+++|++
T Consensus 77 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~-~~~g~iv~~ss~~~~~~~~~~~~Y~asKaa 154 (236)
T PRK06483 77 AIIHNASDWL-AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHG-HAASDIIHITDYVVEKGSDKHIAYAASKAA 154 (236)
T ss_pred EEEECCcccc-CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCC-CCCceEEEEcchhhccCCCCCccHHHHHHH
Confidence 9999999865 44456778999999999999999999999999986532 124679999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
+++|++.++.+.. .++++.+|.+|.... +... .............+ +...|++..+++..++.
T Consensus 155 l~~l~~~~a~e~~---~~irvn~v~Pg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 218 (236)
T PRK06483 155 LDNMTLSFAAKLA---PEVKVNSIAPALILF-NEGD-DAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT 218 (236)
T ss_pred HHHHHHHHHHHHC---CCcEEEEEccCceec-CCCC-CHHHHHHHhccCccccCCCHHHHHHHHHHHhc
Confidence 9999999987643 247888888886532 1111 11111111111111 23578999999998885
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-20 Score=187.40 Aligned_cols=183 Identities=18% Similarity=0.214 Sum_probs=156.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+.++|||||++|||+++|+.|.+.|. .||++||++ +.+++..+....++...|||.|.++.+++++.+.++|+.+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e---~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNE---ERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcH---HHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence 478999999999999999999999976 666677764 3444555556678899999999999999999999999999
Q ss_pred eEEEEcccccCcCccc--ccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 315 DGVLHIAGISGLTSNI--LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~--~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+.||||||+.. .-.+ .+-..++.+..+.+|+.++..|.++++|++.+ ++...||++||..++.+......||++
T Consensus 80 NvliNNAGIqr-~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~---q~~a~IInVSSGLafvPm~~~PvYcaT 155 (245)
T COG3967 80 NVLINNAGIQR-NEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLR---QPEATIINVSSGLAFVPMASTPVYCAT 155 (245)
T ss_pred heeeecccccc-hhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHh---CCCceEEEeccccccCcccccccchhh
Confidence 99999999977 3333 34467788999999999999999999999765 346679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 427 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 427 (1152)
|+++..|+..+|.+.. ..++.++-+.+|....+
T Consensus 156 KAaiHsyt~aLR~Qlk--~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 156 KAAIHSYTLALREQLK--DTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHHHHHHHhh--hcceEEEEecCCceecC
Confidence 9999999999998754 45678999999988764
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.4e-20 Score=204.53 Aligned_cols=222 Identities=17% Similarity=0.164 Sum_probs=174.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|++|+++|++ |++.+|++ ..++..+.++..|.++.++++|++|+++++++++++.+++++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAE-VILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999985 56666663 334555667666778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ..++.+.+.++|++++++|+.|++++.+++.+.|++. ..++||++||..+..+.+++..|+++|
T Consensus 88 ~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~~~~y~~sK 163 (255)
T PRK07523 88 IDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR---GAGKIINIASVQSALARPGIAPYTATK 163 (255)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh---CCeEEEEEccchhccCCCCCccHHHHH
Confidence 999999999876 6788889999999999999999999999999997642 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-c-ccc-hhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-N-EQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~-~~~-~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
++++++++.++.+.. ..++++.+|..|.... .|.... . ... ....+...+ +...++|....+..++..
T Consensus 164 ~a~~~~~~~~a~e~~--~~gi~v~~i~pg~~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 235 (255)
T PRK07523 164 GAVGNLTKGMATDWA--KHGLQCNAIAPGYFDT-PLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASD 235 (255)
T ss_pred HHHHHHHHHHHHHhh--HhCeEEEEEEECcccC-chhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999998876543 2346888888775543 332111 0 100 111111111 234588888888877754
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.3e-20 Score=203.92 Aligned_cols=228 Identities=16% Similarity=0.151 Sum_probs=178.2
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||+||||.+++++|+++|. +|++++|+. ..++..+++...+.++.++.+|++|.+++.++++.+.++++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999987 566666663 3345556676677789999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccC-CHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 315 DGVLHIAGISGLTSNILEA-NYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~-~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
|+||||||... ...+.+. +.++|++.+++|+.|++++.+.+.|.|.+ ..+.||++||.++..+.+++..|+++|
T Consensus 80 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~Y~~sK 154 (263)
T PRK06181 80 DILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKA----SRGQIVVVSSLAGLTGVPTRSGYAASK 154 (263)
T ss_pred CEEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh----cCCEEEEEecccccCCCCCccHHHHHH
Confidence 99999999877 6677777 89999999999999999999999998753 236799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcC---CCCCCHHHHHHHHHHHHhcCceeee
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK---QKVLHENDGLKLFEQLLIQDKIQYL 470 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g---~~~l~~~e~~~~l~~~l~~~~~~~~ 470 (1152)
++++.|++.++.+.. ..++++++|.+|.... .|...............+ ...+++++..+.+..++..+...++
T Consensus 155 ~~~~~~~~~l~~~~~--~~~i~~~~i~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~~~~~ 231 (263)
T PRK06181 155 HALHGFFDSLRIELA--DDGVAVTVVCPGFVAT-DIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARRKRLLV 231 (263)
T ss_pred HHHHHHHHHHHHHhh--hcCceEEEEecCcccc-CcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCCCCEEe
Confidence 999999998876532 3356888898876643 332211000000001011 1468999999999999987655444
Q ss_pred ee
Q psy616 471 VL 472 (1152)
Q Consensus 471 v~ 472 (1152)
..
T Consensus 232 ~~ 233 (263)
T PRK06181 232 MS 233 (263)
T ss_pred cC
Confidence 33
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.6e-20 Score=202.23 Aligned_cols=221 Identities=14% Similarity=0.104 Sum_probs=172.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++||||+||||+.+|++|+++|+.++++.++++ ..++..+++...+.++.++.+|++|.+++.++++++.+.+|+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999986555544443 234555667677888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++ .++||++||.++..+.+++..|+++|
T Consensus 84 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~~ss~~~~~~~~~~~~Y~~sK 157 (245)
T PRK12937 84 IDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ-----GGRIINLSTSVIALPLPGYGPYAASK 157 (245)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc-----CcEEEEEeeccccCCCCCCchhHHHH
Confidence 999999999876 677888899999999999999999999999988632 35799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--ccchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++..|.+|.. .+.|..... .......+...+ ...++++....+..++..
T Consensus 158 ~a~~~~~~~~a~~~~--~~~i~v~~i~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~ 228 (245)
T PRK12937 158 AAVEGLVHVLANELR--GRGITVNAVAPGPV-ATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGP 228 (245)
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEEeCCc-cCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 999999998876532 23457777776654 445532111 111111112222 235788999888877754
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.4e-20 Score=204.44 Aligned_cols=223 Identities=13% Similarity=0.163 Sum_probs=177.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||.+++++|+++|+. |++++|++ ..++...++ ..+.++.++.+|++|.+++.++++.+.+ +|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGAR-LLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence 4689999999999999999999999985 55556653 334444455 3466899999999999999999999876 899
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ..++.+.+.+++++++++|+.|++++.+.+.|+|.+. +.++||++||..+..|.++...|+++|
T Consensus 81 id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~~sK 156 (263)
T PRK09072 81 INVLINNAGVNH-FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ---PSAMVVNVGSTFGSIGYPGYASYCASK 156 (263)
T ss_pred CCEEEECCCCCC-ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc---CCCEEEEecChhhCcCCCCccHHHHHH
Confidence 999999999876 6678889999999999999999999999999997542 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeee
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYL 470 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~ 470 (1152)
+++..|++.++.+.. ..++++.+|.+|... +.|..... .......+....++++..+.+..++..+...+.
T Consensus 157 ~a~~~~~~~l~~~~~--~~~i~v~~v~Pg~~~-t~~~~~~~---~~~~~~~~~~~~~~~~va~~i~~~~~~~~~~~~ 227 (263)
T PRK09072 157 FALRGFSEALRRELA--DTGVRVLYLAPRATR-TAMNSEAV---QALNRALGNAMDDPEDVAAAVLQAIEKERAERW 227 (263)
T ss_pred HHHHHHHHHHHHHhc--ccCcEEEEEecCccc-ccchhhhc---ccccccccCCCCCHHHHHHHHHHHHhCCCCEEe
Confidence 999999999887643 346788888877553 44432111 111112233467899999999999987765443
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.9e-20 Score=204.37 Aligned_cols=187 Identities=12% Similarity=0.138 Sum_probs=158.3
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
-++++++||||++|||+++|++|+++|+ +|+++.|++ ..++..+++...+.++.++.+|++|+++++++++++.+++|
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999998 455666653 33455566666677899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||......++.+.+.++|++++++|+.|++.+.+++.+.|++. .++||++||..+..+.+++..|+++
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~ii~~sS~~~~~~~~~~~~Y~~s 157 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES----GGSIVMINSMVLRHSQPKYGAYKMA 157 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC----CCEEEEEechhhccCCCCcchhHHH
Confidence 999999999986524667788999999999999999999999999987642 2589999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 427 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 427 (1152)
|++++.+++.++.+.. ..++++.+|..|.....
T Consensus 158 K~a~~~l~~~~a~~~~--~~~i~v~~v~pg~v~~~ 190 (258)
T PRK07890 158 KGALLAASQSLATELG--PQGIRVNSVAPGYIWGD 190 (258)
T ss_pred HHHHHHHHHHHHHHHh--hcCcEEEEEeCCccCcH
Confidence 9999999999887632 33568888888876543
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-19 Score=202.18 Aligned_cols=218 Identities=13% Similarity=0.120 Sum_probs=171.9
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc--hHHHHHHHHhCCC-cEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--NSIIYKKLKKFNN-KAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~--~~~~~~~l~~~g~-~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
..++++|||||+||||+++|++|+++|..+|++++|++. .+++.++++..+. ++.++++|++|++++.++++++.+
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~- 84 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA- 84 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-
Confidence 467899999999999999999999997557777777643 4566677776654 789999999999999999999886
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
+|++|++|||+|+.. ...-...+.++..+++++|+.|++.+.+.+.|.|++. +.+.||++||..+..+.++...|+
T Consensus 85 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~---~~~~iv~isS~~g~~~~~~~~~Y~ 160 (253)
T PRK07904 85 GGDVDVAIVAFGLLG-DAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ---GFGQIIAMSSVAGERVRRSNFVYG 160 (253)
T ss_pred cCCCCEEEEeeecCC-chhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc---CCceEEEEechhhcCCCCCCcchH
Confidence 589999999999865 3221222455667899999999999999999998653 346799999999988888889999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCcee
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQ 468 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~ 468 (1152)
++|+++++|++.++.+.. ..++++++|.+|...+ .|..... . ....+++++.++.+...+..+...
T Consensus 161 ~sKaa~~~~~~~l~~el~--~~~i~v~~v~Pg~v~t-~~~~~~~--------~-~~~~~~~~~~A~~i~~~~~~~~~~ 226 (253)
T PRK07904 161 STKAGLDGFYLGLGEALR--EYGVRVLVVRPGQVRT-RMSAHAK--------E-APLTVDKEDVAKLAVTAVAKGKEL 226 (253)
T ss_pred HHHHHHHHHHHHHHHHHh--hcCCEEEEEeeCceec-chhccCC--------C-CCCCCCHHHHHHHHHHHHHcCCCE
Confidence 999999999998876643 3467889998887654 4432111 0 112579999999999999876554
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-20 Score=204.47 Aligned_cols=222 Identities=16% Similarity=0.200 Sum_probs=172.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||+||||+++|++|+++|+.+ ++++|++...+..++++..+.++.++.+|+++++++.++++++.+.+|++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v-~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIP-VIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcE-EEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 47899999999999999999999999865 44566544346667777778889999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ...+...+ ++|+.+++.|+.+++++.+.+.|.|++ ..++||++||..+..+.++...|+++|+
T Consensus 85 d~vi~~ag~~~-~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 158 (258)
T PRK08628 85 DGLVNNAGVND-GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKA----SRGAIVNISSKTALTGQGGTSGYAAAKG 158 (258)
T ss_pred CEEEECCcccC-CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhc----cCcEEEEECCHHhccCCCCCchhHHHHH
Confidence 99999999865 44454444 999999999999999999999998753 2368999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccc-----cccc-cchhHHhhcC--CCCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI-----GNNE-QTDFYFKSSK--QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~-----~~~~-~~~~~~~~~g--~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++.|++.++.+.. ..++++.+|.+|......... .... ......+... ....++++..+.+..++...
T Consensus 159 a~~~~~~~l~~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 235 (258)
T PRK08628 159 AQLALTREWAVALA--KDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSER 235 (258)
T ss_pred HHHHHHHHHHHHHh--hcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChh
Confidence 99999999877543 345688899888765432110 0000 0001111112 24578899999998888654
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.3e-20 Score=203.59 Aligned_cols=220 Identities=17% Similarity=0.127 Sum_probs=170.0
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
++|||||++|||+++|+.|+++|+ +|++++|++ ..++..++++..+ ++.++++|++|+++++++++++.+++|+||+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 589999999999999999999998 466667663 3345556665544 6889999999999999999999999999999
Q ss_pred EEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 317 VLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 317 vIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
||||||.... ...+.+.+.++|.+.+.+|+.+++.+.+.++|.|.+ ....+.||++||.++..+.++...|+++|++
T Consensus 80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~--~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa 157 (259)
T PRK08340 80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLE--KKMKGVLVYLSSVSVKEPMPPLVLADVTRAG 157 (259)
T ss_pred EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHh--cCCCCEEEEEeCcccCCCCCCchHHHHHHHH
Confidence 9999997531 245778899999999999999999999999998743 2235689999999999888999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------ccc-chhHHhhcCC-CCCCHHHHHHHHHHH
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQ-TDFYFKSSKQ-KVLHENDGLKLFEQL 461 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~-~~~~~~~~g~-~~l~~~e~~~~l~~~ 461 (1152)
+.+|++.++.+.. ..++++.+|.+|..... |.... .+. ......+..+ +..+|+|..+++..+
T Consensus 158 ~~~~~~~la~e~~--~~gI~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL 234 (259)
T PRK08340 158 LVQLAKGVSRTYG--GKGIRAYTVLLGSFDTP-GARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFL 234 (259)
T ss_pred HHHHHHHHHHHhC--CCCEEEEEeccCcccCc-cHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHH
Confidence 9999999988754 45678888988766543 32110 000 0011111122 245789999988887
Q ss_pred Hhc
Q psy616 462 LIQ 464 (1152)
Q Consensus 462 l~~ 464 (1152)
+..
T Consensus 235 ~s~ 237 (259)
T PRK08340 235 LSE 237 (259)
T ss_pred cCc
Confidence 764
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.6e-20 Score=203.34 Aligned_cols=188 Identities=12% Similarity=0.118 Sum_probs=157.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC-C-CcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF-N-NKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~-g-~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++++|||||+|+||.+++++|+++|+ +|++++|+. ..+...+++... + .++.++.||++|.+++.++++++.+.++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999987 566666663 334444455443 2 4789999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||... ...+.+.+.++|++.+++|+.|++++.+++.+.|++.. ..++||++||.++..|.++...|+++
T Consensus 81 ~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~iv~~ss~~~~~~~~~~~~Y~~s 157 (259)
T PRK12384 81 RVDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG--IQGRIIQINSKSGKVGSKHNSGYSAA 157 (259)
T ss_pred CCCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC--CCcEEEEecCcccccCCCCCchhHHH
Confidence 9999999999877 67788899999999999999999999999999976432 24689999999999998999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 429 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 429 (1152)
|++++.|++.++.+.. ..++++.+|.+|.+-+++|
T Consensus 158 Kaa~~~l~~~la~e~~--~~gi~v~~v~pg~~~~~~~ 192 (259)
T PRK12384 158 KFGGVGLTQSLALDLA--EYGITVHSLMLGNLLKSPM 192 (259)
T ss_pred HHHHHHHHHHHHHHHH--HcCcEEEEEecCCcccchh
Confidence 9999999988876532 3456899999987755554
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-19 Score=201.70 Aligned_cols=222 Identities=10% Similarity=0.101 Sum_probs=171.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||.+++++|+++|+ +|+++.|+. ..++..+++. .+.++.+++||++|+++++++++++.+++++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999987 566666664 2333444444 4677899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ...+.+.+.++|++++++|+.+++++.+.+++.|++. +.++||++||+.+..|.+++..|+++|
T Consensus 82 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~ii~~sS~~~~~~~~~~~~Y~~sK 157 (252)
T PRK06138 82 LDVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ---GGGSIVNTASQLALAGGRGRAAYVASK 157 (252)
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc---CCeEEEEECChhhccCCCCccHHHHHH
Confidence 999999999876 6777888999999999999999999999999997643 456899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------cccchhHHh-hcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------NEQTDFYFK-SSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------~~~~~~~~~-~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.|++.++.+.. ..++++++|.+|... +.|.... ......... .... ....+++....+..++..+
T Consensus 158 ~a~~~~~~~l~~~~~--~~~i~v~~v~pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 234 (252)
T PRK06138 158 GAIASLTRAMALDHA--TDGIRVNAVAPGTID-TPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDE 234 (252)
T ss_pred HHHHHHHHHHHHHHH--hcCeEEEEEEECCcc-CcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 999999999876643 235688888877653 3332111 000000111 1111 2456888888888776554
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-19 Score=204.98 Aligned_cols=223 Identities=17% Similarity=0.187 Sum_probs=173.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++||||+||||+++++.|+++|++ |++++|+ +..++..++++..+.++.+++||++|++++..+++++.+++|+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAK-VAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4799999999999999999999999985 5666665 3345556667666778999999999999999999999999999
Q ss_pred eeEEEEcccccCc--------------CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcc
Q psy616 314 IDGVLHIAGISGL--------------TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA 379 (1152)
Q Consensus 314 idgvIh~AG~~~~--------------~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~ 379 (1152)
+|+||||||.... ..++.+.+.++|++++++|+.+++.+.+++.|.|++. +.+.||++||.++
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~ii~isS~~~ 164 (278)
T PRK08277 88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR---KGGNIINISSMNA 164 (278)
T ss_pred CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc---CCcEEEEEccchh
Confidence 9999999996431 1346788899999999999999999999999998653 2467999999999
Q ss_pred ccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc----ccc----cchhHHhhcCC-CCCC
Q psy616 380 ILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG----NNE----QTDFYFKSSKQ-KVLH 450 (1152)
Q Consensus 380 ~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~----~~~----~~~~~~~~~g~-~~l~ 450 (1152)
..+.++...|+++|++++.|++.++.+.. ..++++.+|.+|.... .|... ... ..........+ +..+
T Consensus 165 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~girvn~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 241 (278)
T PRK08277 165 FTPLTKVPAYSAAKAAISNFTQWLAVHFA--KVGIRVNAIAPGFFLT-EQNRALLFNEDGSLTERANKILAHTPMGRFGK 241 (278)
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHhC--ccCeEEEEEEeccCcC-cchhhhhccccccchhHHHHHhccCCccCCCC
Confidence 99999999999999999999999987754 3466888888776643 23211 000 00011111111 2357
Q ss_pred HHHHHHHHHHHHhc
Q psy616 451 ENDGLKLFEQLLIQ 464 (1152)
Q Consensus 451 ~~e~~~~l~~~l~~ 464 (1152)
++|..+++..++..
T Consensus 242 ~~dva~~~~~l~s~ 255 (278)
T PRK08277 242 PEELLGTLLWLADE 255 (278)
T ss_pred HHHHHHHHHHHcCc
Confidence 89999998887664
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.3e-20 Score=204.50 Aligned_cols=184 Identities=13% Similarity=0.082 Sum_probs=155.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||+||||+++|+.|+++|+ +|++++|++..++..+++...+.++.++.+|++|.+++.++++++.+++|++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999998 5666677755555666777777889999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||......++.+.+.++|++.+++|+.+++++.+.++|.|++. ..+.||++||.++. ..+...|+++|+
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~~sS~~~~--~~~~~~Y~~sK~ 160 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ---GGGAIVNVSSIATR--GINRVPYSAAKG 160 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCeEEEEcCcccc--CCCCCccHHHHH
Confidence 9999999965324678889999999999999999999999999998653 34679999998764 345678999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
+++.|++.++.+.. ..++++.+|.+|....
T Consensus 161 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t 190 (260)
T PRK12823 161 GVNALTASLAFEYA--EHGIRVNAVAPGGTEA 190 (260)
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEecCccCC
Confidence 99999999887643 3467889999887653
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-20 Score=205.95 Aligned_cols=176 Identities=18% Similarity=0.219 Sum_probs=151.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||++|||+++|++|+++|+ +|++++|+... ..++.+++||++|+++++++++++.+++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 73 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPS----------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRI 73 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccc----------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999998 55566666421 1257889999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++. ..+.||++||+++..+.+++..|+++|+
T Consensus 74 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sKa 149 (258)
T PRK06398 74 DILVNNAGIES-YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ---DKGVIINIASVQSFAVTRNAAAYVTSKH 149 (258)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCeEEEEeCcchhccCCCCCchhhhhHH
Confidence 99999999876 6788899999999999999999999999999998643 3468999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 429 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 429 (1152)
+++.|++.++.+.. . .+++.+|.+|.. ++.|
T Consensus 150 al~~~~~~la~e~~--~-~i~vn~i~PG~v-~T~~ 180 (258)
T PRK06398 150 AVLGLTRSIAVDYA--P-TIRCVAVCPGSI-RTPL 180 (258)
T ss_pred HHHHHHHHHHHHhC--C-CCEEEEEecCCc-cchH
Confidence 99999999987643 2 378888887755 3443
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-20 Score=217.55 Aligned_cols=281 Identities=22% Similarity=0.251 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCcccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs~tvdtaCsS 797 (1152)
..|+.+++.+||+|||+++++++ +|++|....+.... ....+..++..+|++ +|+++|+++|+|
T Consensus 23 ~eLa~~a~~~Al~dagl~~~~Id----~vi~g~~~~~~~~~-----------~~~~a~~va~~lGl~~~~~~~v~~aCas 87 (389)
T PRK06064 23 RDLAVEAGLEALEDAGIDGKDID----AMYVGNMSAGLFVS-----------QEHIAALIADYAGLAPIPATRVEAACAS 87 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccccc-----------cccHHHHHHHHcCCCCCCeeEEeCCcHH
Confidence 67789999999999999988887 78888654332110 012467789999998 799999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH--HHHHHHh---------cCCC-------------------------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMIS-PE--AYIAMTS---------AGML------------------------- 840 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~--~~~~~~~---------~g~l------------------------- 840 (1152)
++.||.+|++.|++|++|.+||+|++.+.. |. ....+.. .|+.
T Consensus 88 g~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~ 167 (389)
T PRK06064 88 GGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLAL 167 (389)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 999999999999999999999999975321 10 0000000 0000
Q ss_pred -----------CCCCC----------------cccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCC
Q psy616 841 -----------SPDGK----------------CYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDG 893 (1152)
Q Consensus 841 -----------s~~g~----------------~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG 893 (1152)
.|... +.|+- ..|.-.++||++++||++.+.|.+.++++ +.|+|++..+++
T Consensus 168 ~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~s~~~A~~~~~~~-v~I~g~g~~~~~ 245 (389)
T PRK06064 168 VAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILASEEKAKEYTDTP-VWIKASGQASDT 245 (389)
T ss_pred HHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEecHHHHHHhcCCC-eEEEEEEEecCc
Confidence 00000 00111 22444679999999999999999988664 599999998877
Q ss_pred CCCCCC--CCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccc-----------CCCCCcee
Q psy616 894 KTNGIT--APNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNK-----------TYNQKFCA 960 (1152)
Q Consensus 894 ~~~~~~--~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~-----------~~~~~~~~ 960 (1152)
.+.... -++..+...+++++|++|||+|+||||+|.|+++|. .+.++++++. |+.. ......++
T Consensus 246 ~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~-~~~~~~e~lg--l~~~G~~~~~~~~g~~~~~g~~p 322 (389)
T PRK06064 246 IALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTI-AEILAYEDLG--FAKKGEGGKLAREGQTYIGGDIP 322 (389)
T ss_pred ccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcH-HHHHHHHHcC--CCCCCchHHHHHCCCccCCCCee
Confidence 543211 123456778999999999999999999999999997 3555666554 2211 11112245
Q ss_pred e---eccCCCCCccccchhhHHHHHHHHhhhcCC--cCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcC
Q psy616 961 I---TSNKSNIGHTFAASGLVSLINLVQSIKYKI--IPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSA 1035 (1152)
Q Consensus 961 i---gsvKsniGH~~~AaG~~~lik~~l~l~~~~--ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~s 1035 (1152)
| |+.++ .||+.+|+|+..++.++++|+.+- =..++ ...+++++.+
T Consensus 323 vN~~GG~l~-~Ghp~~a~G~~~~~e~~~qL~g~a~~g~rqv-----------------------------~~a~~~l~~~ 372 (389)
T PRK06064 323 VNPSGGLKA-KGHPVGATGVSQAVEIVWQLRGEAEKGRQQV-----------------------------IGAGYGLTHN 372 (389)
T ss_pred ecCCCCccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCccC-----------------------------CCccEEEEec
Confidence 5 44554 599999999999999999999842 11110 1347888998
Q ss_pred cC-CCcceEEEEEcc
Q psy616 1036 FG-MSGTNAHIVLQE 1049 (1152)
Q Consensus 1036 fG-~gG~nah~il~~ 1049 (1152)
+| .+++++.+||+.
T Consensus 373 ~g~~~~~~~~~vl~~ 387 (389)
T PRK06064 373 VGGTGHTAVVHILSR 387 (389)
T ss_pred CCCccceEEEEEEEe
Confidence 87 345666667653
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-19 Score=202.04 Aligned_cols=219 Identities=16% Similarity=0.195 Sum_probs=167.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+++++||||++|||+++|+.|+++|++++++..|++ +..++++.. .+.++.+|++|+++++++++++.+.+|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~---~~~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE---NEAKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEFGRV 80 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999986555544443 223444433 36789999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-CCCCChhhhHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDFGSCDYAMGN 393 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~-g~~g~~~Yaaan 393 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++. +.+.||++||.++.. +.++.+.|+++|
T Consensus 81 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~---~~g~iv~isS~~~~~~~~~~~~~Y~asK 156 (255)
T PRK06463 81 DVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS---KNGAIVNIASNAGIGTAAEGTTFYAITK 156 (255)
T ss_pred CEEEECCCcCC-CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc---CCcEEEEEcCHHhCCCCCCCccHhHHHH
Confidence 99999999876 6778889999999999999999999999999997642 346899999998874 456888999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--cc---ch-hHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQ---TD-FYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~---~~-~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++++|++.++.+.. ..++++.+|.+|.. ++.|..... .. .. .......+ +..+|++..+.+..++...
T Consensus 157 aa~~~~~~~la~e~~--~~~i~v~~i~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 232 (255)
T PRK06463 157 AGIIILTRRLAFELG--KYGIRVNAVAPGWV-ETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDD 232 (255)
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEeeCCC-CCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChh
Confidence 999999999987643 34568888877655 455532211 10 00 01111112 2357899999888877543
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=204.45 Aligned_cols=221 Identities=11% Similarity=0.061 Sum_probs=171.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-CC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-GP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-G~ 313 (1152)
.++++|||||+||||+++|+.|+++|+ +|++++|+... .+++... .+.++.+|++|.++++++++++.+.+ |+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~---~~~l~~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEED---VAALEAE--GLEAFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHH---HHHHHHC--CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 467999999999999999999999988 56666666422 2334433 36788999999999999999987766 68
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|.||||||+.. .+.+.+.+.++|+.++++|+.|++.+.+.++|.|++. ..+.||++||+.+..+.++.+.|+++|
T Consensus 77 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 152 (277)
T PRK05993 77 LDALFNNGAYGQ-PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ---GQGRIVQCSSILGLVPMKYRGAYNASK 152 (277)
T ss_pred ccEEEECCCcCC-CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc---CCCEEEEECChhhcCCCCccchHHHHH
Confidence 999999999877 6778889999999999999999999999999998643 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc------------cchhH------Hh---hcCCCCCCHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE------------QTDFY------FK---SSKQKVLHEN 452 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~------------~~~~~------~~---~~g~~~l~~~ 452 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|...... ....+ .. ......++|+
T Consensus 153 ~a~~~~~~~l~~el~--~~gi~v~~v~Pg~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (277)
T PRK05993 153 FAIEGLSLTLRMELQ--GSGIHVSLIEPGPIE-TRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPE 229 (277)
T ss_pred HHHHHHHHHHHHHhh--hhCCEEEEEecCCcc-CchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHH
Confidence 999999999886643 346688899888664 333221100 00000 00 0112247899
Q ss_pred HHHHHHHHHHhcCcee
Q psy616 453 DGLKLFEQLLIQDKIQ 468 (1152)
Q Consensus 453 e~~~~l~~~l~~~~~~ 468 (1152)
++++.+.+++..+.+.
T Consensus 230 ~va~~i~~a~~~~~~~ 245 (277)
T PRK05993 230 AVYAVLLHALTAPRPR 245 (277)
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999877653
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=200.26 Aligned_cols=215 Identities=14% Similarity=0.093 Sum_probs=168.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++++.|+++|+ +|+++.|+... ...+.++.++++|++|+++++++++.+.+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 76 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE-------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRL 76 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh-------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999988 56666666422 1235678899999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.|.|.+. ...+.||++||+++..+.++...|+++|+
T Consensus 77 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~g~ii~isS~~~~~~~~~~~~Y~~sK~ 153 (252)
T PRK07856 77 DVLVNNAGGSP-YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ--PGGGSIVNIGSVSGRRPSPGTAAYGAAKA 153 (252)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCcEEEEEcccccCCCCCCCchhHHHHH
Confidence 99999999876 6677889999999999999999999999999987542 23467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+.. .. +++.+|.+|... +.|.... ........+...+ +...|++..+.+..++..
T Consensus 154 a~~~l~~~la~e~~--~~-i~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~ 223 (252)
T PRK07856 154 GLLNLTRSLAVEWA--PK-VRVNAVVVGLVR-TEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASD 223 (252)
T ss_pred HHHHHHHHHHHHhc--CC-eEEEEEEecccc-ChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999987643 22 688888877664 3332211 0100011111111 235789998888877654
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-19 Score=198.03 Aligned_cols=229 Identities=18% Similarity=0.200 Sum_probs=180.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.+++++||||+||||..++++|+++|+ .|++++|+. ..++...+++..+.++.++.+|+++++++.++++++.+++++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999998 677777764 334455666666778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ...+.+.+.++|++.+++|+.|++++.+++.+.|.+. ..+.+|++||..+..+.++...|+++|
T Consensus 85 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~~ss~~~~~~~~~~~~Y~~sK 160 (239)
T PRK07666 85 IDILINNAGISK-FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER---QSGDIINISSTAGQKGAAVTSAYSASK 160 (239)
T ss_pred ccEEEEcCcccc-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCcEEEEEcchhhccCCCCCcchHHHH
Confidence 999999999876 5677788999999999999999999999999987543 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeeeeec
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLS 473 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~v~~ 473 (1152)
++++.|++.++.+.. ..+++++.|..|...+ +|....... .......+++++..+.+.+++..+...++-..
T Consensus 161 ~a~~~~~~~~a~e~~--~~gi~v~~v~pg~v~t-~~~~~~~~~-----~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~ 232 (239)
T PRK07666 161 FGVLGLTESLMQEVR--KHNIRVTALTPSTVAT-DMAVDLGLT-----DGNPDKVMQPEDLAEFIVAQLKLNKRTFIKSA 232 (239)
T ss_pred HHHHHHHHHHHHHhh--ccCcEEEEEecCcccC-cchhhcccc-----ccCCCCCCCHHHHHHHHHHHHhCCCceEEEEE
Confidence 999999988876543 3356888888776543 332211100 11122457899999999999987644333333
Q ss_pred hhh
Q psy616 474 GEL 476 (1152)
Q Consensus 474 ~~~ 476 (1152)
+.|
T Consensus 233 ~~~ 235 (239)
T PRK07666 233 GLW 235 (239)
T ss_pred EEe
Confidence 444
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=199.67 Aligned_cols=219 Identities=13% Similarity=0.159 Sum_probs=167.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||++++++|+++|+ +|++..|+. ..++.. ...+.++.++.+|++|.+++.++++++.+.+++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALA---AELGERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHH---HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999997 555555553 222222 233567889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ...+.+.+.++|++++++|+.|++++.+++.+.|.+. +.++||++||.++..+.++...|+++|
T Consensus 81 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sk 156 (245)
T PRK12936 81 VDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR---RYGRIINITSVVGVTGNPGQANYCASK 156 (245)
T ss_pred CCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh---CCCEEEEECCHHhCcCCCCCcchHHHH
Confidence 999999999877 6677888999999999999999999999998876532 356899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchh-HHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF-YFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~-~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++.+|.||.+.. .|.......... ....... +...+++..+.+..++..
T Consensus 157 ~a~~~~~~~la~~~~--~~~i~v~~i~pg~~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~ 226 (245)
T PRK12936 157 AGMIGFSKSLAQEIA--TRNVTVNCVAPGFIES-AMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASS 226 (245)
T ss_pred HHHHHHHHHHHHHhh--HhCeEEEEEEECcCcC-chhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999988876533 2356889999987754 332211111111 1111111 234678888888766643
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=202.67 Aligned_cols=219 Identities=13% Similarity=0.137 Sum_probs=166.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|++|+++|+. |++++|++. .+.+.+ ..+.++.++++|++|.++++++++++.+.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGAR-VAVLERSAEKLASLRQ---RFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHH---HhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999885 666667642 222222 23556889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHH----HHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 314 IDGVLHIAGISGLTSNILEANYKN----FYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~----~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
+|+||||||+.....++.+.+.++ |++++++|+.|++.+.+.++|.|++. .+.||++||+++..+.++...|
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~g~iv~~sS~~~~~~~~~~~~Y 156 (263)
T PRK06200 81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS----GGSMIFTLSNSSFYPGGGGPLY 156 (263)
T ss_pred CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc----CCEEEEECChhhcCCCCCCchh
Confidence 999999999864234566666665 99999999999999999999997642 3679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhhcC-CCCCCHHHHHH
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSK-QKVLHENDGLK 456 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g-~~~l~~~e~~~ 456 (1152)
+++|+++..|++.++.+.. . ++++.+|.+|... +.|.... ............ -+..+|+|...
T Consensus 157 ~~sK~a~~~~~~~la~el~--~-~Irvn~i~PG~i~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~ 232 (263)
T PRK06200 157 TASKHAVVGLVRQLAYELA--P-KIRVNGVAPGGTV-TDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTG 232 (263)
T ss_pred HHHHHHHHHHHHHHHHHHh--c-CcEEEEEeCCccc-cCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhh
Confidence 9999999999999988753 2 3788899888764 4442210 000011111111 13457888888
Q ss_pred HHHHHHhcC
Q psy616 457 LFEQLLIQD 465 (1152)
Q Consensus 457 ~l~~~l~~~ 465 (1152)
.+..++...
T Consensus 233 ~~~fl~s~~ 241 (263)
T PRK06200 233 PYVLLASRR 241 (263)
T ss_pred hhhheeccc
Confidence 888777543
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-19 Score=202.38 Aligned_cols=224 Identities=13% Similarity=0.067 Sum_probs=174.7
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.+.++++||||+||||++++++|+++|+. |+++.|+ +..++....+...+.++.++.+|++|++++.++++++.+.++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFP-VALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 35689999999999999999999999985 4444554 333444555666677889999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||... ...+.+.+.++|++.+++|+.|++++.+.++|.|.+. ..++||++||..+..+.++...|+++
T Consensus 87 ~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~s 162 (274)
T PRK07775 87 EIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER---RRGDLIFVGSDVALRQRPHMGAYGAA 162 (274)
T ss_pred CCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCceEEEECChHhcCCCCCcchHHHH
Confidence 9999999999876 5667788999999999999999999999999987543 34679999999999888999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-cccchhH---Hhh----cCCCCCCHHHHHHHHHHHHhc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFY---FKS----SKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~---~~~----~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
|++++.|++.++.+.. ..++++++|.+|++. +++.... ....... ... .....+.+++..+++..++..
T Consensus 163 K~a~~~l~~~~~~~~~--~~gi~v~~v~pG~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~ 239 (274)
T PRK07775 163 KAGLEAMVTNLQMELE--GTGVRASIVHPGPTL-TGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAET 239 (274)
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEeCCccc-CcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcC
Confidence 9999999998877633 235688999998774 3322111 1100000 011 112368899999999888876
Q ss_pred C
Q psy616 465 D 465 (1152)
Q Consensus 465 ~ 465 (1152)
+
T Consensus 240 ~ 240 (274)
T PRK07775 240 P 240 (274)
T ss_pred C
Confidence 5
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-19 Score=199.38 Aligned_cols=224 Identities=16% Similarity=0.183 Sum_probs=171.8
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.+++|||||+||||.+++++|+++|+. |+++.|+. ..+...+.++..+.++.++.+|++|++++.++++++.+.+++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFD-LAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999985 55555543 223445556666778999999999999999999999999999
Q ss_pred eeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCC---CCEEEEecCCccccCCCCChhh
Q psy616 314 IDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK---LDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 314 idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~---~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
+|+||||||.... ..++.+.+.++|+.++++|+.|++++.+++.+.|.+..... .++||++||+.+..+.++.+.|
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 160 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEY 160 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCccc
Confidence 9999999998541 34577889999999999999999999999999987543322 5679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCC----CCCHHHHHHHHHHHHhc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQK----VLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~----~l~~~e~~~~l~~~l~~ 464 (1152)
+++|++++.|++.++.+.. ..++++++|.+|.+... |...........+.. +.. ...+++..+++..++..
T Consensus 161 ~~sK~a~~~~~~~l~~~~~--~~gi~v~~i~pg~v~t~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~~i~~l~~~ 235 (256)
T PRK12745 161 CISKAGLSMAAQLFAARLA--EEGIGVYEVRPGLIKTD-MTAPVTAKYDALIAK-GLVPMPRWGEPEDVARAVAALASG 235 (256)
T ss_pred HHHHHHHHHHHHHHHHHHH--HhCCEEEEEecCCCcCc-cccccchhHHhhhhh-cCCCcCCCcCHHHHHHHHHHHhCC
Confidence 9999999999998876532 23568999999887643 322111111111111 111 23688888888777643
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=199.36 Aligned_cols=219 Identities=19% Similarity=0.203 Sum_probs=174.1
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCC-CcEEEEEecCC--CHHHHHHHHHHHH
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFN-NKAIYIQVDVS--DKLKMISEINSII 308 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g-~~v~~~~~Dvs--d~~~v~~~~~~~~ 308 (1152)
+.++++++||||+|+||..++++|+++|+ +|+++.|+. ..++..++++..+ .++.++.+|++ ++++++++++.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999988 555566653 3345556665544 45777778886 8899999999999
Q ss_pred hhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 309 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 309 ~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
+.++++|+||||||......++.+.+.+.|++.+++|+.|++++.+++.|+|.+. +.++||++||.++..+.+++..
T Consensus 88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~---~~~~iv~~ss~~~~~~~~~~~~ 164 (247)
T PRK08945 88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS---PAASLVFTSSSVGRQGRANWGA 164 (247)
T ss_pred HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC---CCCEEEEEccHhhcCCCCCCcc
Confidence 9999999999999986534567788999999999999999999999999997543 4578999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|++++.|++..+.+.. ..++++.+|+|+.|.. .|...... ........++++..+.+.+++..
T Consensus 165 Y~~sK~a~~~~~~~~~~~~~--~~~i~~~~v~pg~v~t-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 231 (247)
T PRK08945 165 YAVSKFATEGMMQVLADEYQ--GTNLRVNCINPGGTRT-AMRASAFP------GEDPQKLKTPEDIMPLYLYLMGD 231 (247)
T ss_pred cHHHHHHHHHHHHHHHHHhc--ccCEEEEEEecCCccC-cchhhhcC------cccccCCCCHHHHHHHHHHHhCc
Confidence 99999999999998877643 3567899999998864 44221100 01122457899999999987643
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=201.83 Aligned_cols=225 Identities=17% Similarity=0.205 Sum_probs=173.9
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++++|||||+||||.+++++|+++|+. |++++|+. ..++..+++... +.++.++.+|++|++++++ ++++.+.+|
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYL-VIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 578999999999999999999999875 55556654 333444444433 3578899999999999999 999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||... ...+.+.+.++|++.+++|+.|++++.+.+.|.|++. ..+.||++||.++..|.+++..|+++
T Consensus 81 ~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~~~~Y~~s 156 (280)
T PRK06914 81 RIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ---KSGKIINISSISGRVGFPGLSPYVSS 156 (280)
T ss_pred CeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCCEEEEECcccccCCCCCCchhHHh
Confidence 9999999999877 6777888999999999999999999999999997643 34679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-------c--ccchhHHh-------hcCCCCCCHHHHHH
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-------N--EQTDFYFK-------SSKQKVLHENDGLK 456 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-------~--~~~~~~~~-------~~g~~~l~~~e~~~ 456 (1152)
|++++.|++.++.+.. ..+++++.+..|.+....+.... . ......+. .......++++..+
T Consensus 157 K~~~~~~~~~l~~~~~--~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 234 (280)
T PRK06914 157 KYALEGFSESLRLELK--PFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVAN 234 (280)
T ss_pred HHHHHHHHHHHHHHhh--hhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHH
Confidence 9999999998876533 33568888888776544322100 0 00000000 01123578999999
Q ss_pred HHHHHHhcCcee
Q psy616 457 LFEQLLIQDKIQ 468 (1152)
Q Consensus 457 ~l~~~l~~~~~~ 468 (1152)
++..++..+.+.
T Consensus 235 ~~~~~~~~~~~~ 246 (280)
T PRK06914 235 LIVEIAESKRPK 246 (280)
T ss_pred HHHHHHcCCCCC
Confidence 999999877654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-19 Score=199.25 Aligned_cols=221 Identities=14% Similarity=0.130 Sum_probs=172.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||.++|++|+++|+ +|++++|+....+...++. +.++.++++|+++++++.++++++.+.++++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999998 5777788754443333332 3467789999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ..++.+.+.++|++.+++|+.|++++.+++.|.|++. ..++||++||+.+..|.++...|+++|+
T Consensus 91 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 166 (255)
T PRK06841 91 DILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA---GGGKIVNLASQAGVVALERHVAYCASKA 166 (255)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc---CCceEEEEcchhhccCCCCCchHHHHHH
Confidence 99999999876 6677888999999999999999999999999997643 3467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++.|++.++.+.. ..++++.+|.+|... +.|..... .......+.... ....+++..+.+..++...
T Consensus 167 a~~~~~~~la~e~~--~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 237 (255)
T PRK06841 167 GVVGMTKVLALEWG--PYGITVNAISPTVVL-TELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDA 237 (255)
T ss_pred HHHHHHHHHHHHHH--hhCeEEEEEEeCcCc-CcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 99999999887643 235678888877664 33322110 011111111111 3467899999988887543
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=201.76 Aligned_cols=183 Identities=15% Similarity=0.109 Sum_probs=154.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++|||+++|++|+++|+ +|++++|+. ..++..++++.. +.++.++.+|++|+++++++++. +|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AG 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hC
Confidence 479999999999999999999999998 666667763 334455556543 56788999999999999888753 58
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|++|||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..+.||++||..+..+.++...|+++
T Consensus 81 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~~~~y~as 156 (259)
T PRK06125 81 DIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR---GSGVIVNVIGAAGENPDADYICGSAG 156 (259)
T ss_pred CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCcEEEEecCccccCCCCCchHhHHH
Confidence 9999999999876 6788899999999999999999999999999998653 23579999999998888889999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSK 428 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~G 428 (1152)
|+++.+|++.++.+.. ..++++.+|.+|++....
T Consensus 157 k~al~~~~~~la~e~~--~~gi~v~~i~PG~v~t~~ 190 (259)
T PRK06125 157 NAALMAFTRALGGKSL--DDGVRVVGVNPGPVATDR 190 (259)
T ss_pred HHHHHHHHHHHHHHhC--ccCeEEEEEecCccccHH
Confidence 9999999999987643 456799999999886543
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-19 Score=197.80 Aligned_cols=220 Identities=15% Similarity=0.173 Sum_probs=168.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||+||||..++++|+++|+.++++.+++. ..++...++...+.++.++.+|++|++++.++++.+.+.++++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 58999999999999999999999986555544332 22334445555567899999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
+||||||... ...+.+.+.++|++.+++|+.+++.+.+.+.|.|++. +.++||++||..+..|.+++..|+++|++
T Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~sk~a 156 (242)
T TIGR01829 81 VLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER---GWGRIINISSVNGQKGQFGQTNYSAAKAG 156 (242)
T ss_pred EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEEcchhhcCCCCCcchhHHHHHH
Confidence 9999999876 6677888999999999999999999999999997643 34689999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcC-CCCCCHHHHHHHHHHHHh
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~ 463 (1152)
++.|++.++.+.. ..++++.++.+|.+.+. |....... ......... ....++++....+..++.
T Consensus 157 ~~~~~~~la~~~~--~~~i~v~~i~pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~ 223 (242)
T TIGR01829 157 MIGFTKALAQEGA--TKGVTVNTISPGYIATD-MVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLAS 223 (242)
T ss_pred HHHHHHHHHHHhh--hhCeEEEEEeeCCCcCc-cccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 9999998876543 34568888887776543 22111111 111111111 123567777777765554
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-19 Score=200.28 Aligned_cols=218 Identities=13% Similarity=0.114 Sum_probs=168.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+++++||||+||||+++++.|+++|++ |++++|+.... . ....+.++++|++|+++++++++.+.+.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~~------~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~ 74 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYR-VFGTSRNPARA------A-PIPGVELLELDVTDDASVQAAVDEVIARAGRI 74 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCChhhc------c-ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999999999999875 66666653211 1 12357889999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ...+.+.+.+++++++++|+.|++++.+.++|.|++. ..++||++||.++..+.++.+.|+++|+
T Consensus 75 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 150 (270)
T PRK06179 75 DVLVNNAGVGL-AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ---GSGRIINISSVLGFLPAPYMALYAASKH 150 (270)
T ss_pred CEEEECCCCCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCceEEEECCccccCCCCCccHHHHHHH
Confidence 99999999987 6778889999999999999999999999999997653 4567999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---ch----------hHHhhcCCCCCCHHHHHHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TD----------FYFKSSKQKVLHENDGLKLFEQL 461 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~----------~~~~~~g~~~l~~~e~~~~l~~~ 461 (1152)
+++.|++.++.+.. ..++++++|..|... +.|....... .. ......-....++++..+.+..+
T Consensus 151 a~~~~~~~l~~el~--~~gi~v~~v~pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ 227 (270)
T PRK06179 151 AVEGYSESLDHEVR--QFGIRVSLVEPAYTK-TNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKA 227 (270)
T ss_pred HHHHHHHHHHHHHh--hhCcEEEEEeCCCcc-cccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHH
Confidence 99999998876632 235688888776544 3332211100 00 00011112346788888888888
Q ss_pred HhcCce
Q psy616 462 LIQDKI 467 (1152)
Q Consensus 462 l~~~~~ 467 (1152)
+..+.+
T Consensus 228 ~~~~~~ 233 (270)
T PRK06179 228 ALGPWP 233 (270)
T ss_pred HcCCCC
Confidence 776543
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.9e-20 Score=215.45 Aligned_cols=265 Identities=21% Similarity=0.234 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCs 796 (1152)
.-|..+++.+||+|||+++++++ ++++|+...++. + ...+..+...+|++. |++.|+++|+
T Consensus 23 ~~La~~A~~~AL~dAgl~~~dID----~vi~~~~~~~~~----------~---~~~a~~v~~~lGl~~~~~~~~v~~~c~ 85 (386)
T cd00751 23 DDLGAAVIKALLERAGLDPEEVD----DVIMGNVLQAGE----------G---QNPARQAALLAGLPESVPATTVNRVCG 85 (386)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC----EEEEEeccCCCC----------C---ChHHHHHHHHcCCCCCCchhhhccccH
Confidence 67889999999999999998887 788876543321 0 123556889999975 9999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHHH--H---H---------HhcCCCC--------------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI--A---M---------TSAGMLS-------------------- 841 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~~--~---~---------~~~g~ls-------------------- 841 (1152)
|++.||+.|++.|++|++|.+||+|++.+.. |.... . + ...+...
T Consensus 86 s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~ 165 (386)
T cd00751 86 SGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGI 165 (386)
T ss_pred HHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCC
Confidence 9999999999999999999999999875421 10000 0 0 0001000
Q ss_pred -------------------C-------------------------CCCccc-------------CC-----CCCCCcccc
Q psy616 842 -------------------P-------------------------DGKCYV-------------FD-----ERANGLVPS 859 (1152)
Q Consensus 842 -------------------~-------------------------~g~~~~-------------Fd-----~~a~G~v~g 859 (1152)
+ +...|+ |+ ...|--.++
T Consensus 166 tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~ 245 (386)
T cd00751 166 SREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGIN 245 (386)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCC
Confidence 0 000000 11 112334468
Q ss_pred cccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCH
Q psy616 860 EAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 939 (1152)
Q Consensus 860 EG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~ 939 (1152)
||++++||++.+.|.+.+++++++|+|++.++++.. +...++..+++++|++|||+|+||||+|.|.+.|.
T Consensus 246 dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~---- 316 (386)
T cd00751 246 DGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA-----IMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAA---- 316 (386)
T ss_pred cceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEeechhHH----
Confidence 999999999999999999999999999999987643 23446679999999999999999999999977653
Q ss_pred HHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccc
Q psy616 940 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNK 1019 (1152)
Q Consensus 940 ~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~ 1019 (1152)
.|+- ..+.|+-.. .++.+..-|...||+.+|+|+.++++++++|+..
T Consensus 317 ~~~~-~~e~lg~~~---~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~----------------------------- 363 (386)
T cd00751 317 QALA-CLKELGLDP---EKVNVNGGAIALGHPLGASGARIVVTLLHELKRR----------------------------- 363 (386)
T ss_pred HHHH-HHHHhCCCh---hhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc-----------------------------
Confidence 2332 234444221 2344555566889999999999999999999973
Q ss_pred cccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1020 KWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1020 ~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..|+++++.-+.||..+.+|||.
T Consensus 364 -------~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 364 -------GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred -------CCCEEEEEEcccccceEEEEEEC
Confidence 12678899999999999999983
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.1e-20 Score=204.41 Aligned_cols=181 Identities=18% Similarity=0.270 Sum_probs=152.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||++++++|+++|+.+++ +.|+.... ...++.++++|++|+++++++++++.+.+|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~-~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVN-ADIHGGDG--------QHENYQFVPTDVSSAEEVNHTVAEIIEKFGRI 78 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeCCcccc--------ccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999985544 44543211 12367889999999999999999999999999
Q ss_pred eEEEEcccccCcCc---------ccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC
Q psy616 315 DGVLHIAGISGLTS---------NILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 385 (1152)
Q Consensus 315 dgvIh~AG~~~~~~---------~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g 385 (1152)
|+||||||... .. .+.+.+.++|++++++|+.|++++.+++.++|++. ..++||++||.++..+.++
T Consensus 79 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~ 154 (266)
T PRK06171 79 DGLVNNAGINI-PRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ---HDGVIVNMSSEAGLEGSEG 154 (266)
T ss_pred CEEEECCcccC-CccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc---CCcEEEEEccccccCCCCC
Confidence 99999999754 22 23467899999999999999999999999997642 3468999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccc
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 430 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 430 (1152)
+..|+++|+++++|++.++.+.. ..++++.+|.+|.+..++|.
T Consensus 155 ~~~Y~~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~~~~t~~~ 197 (266)
T PRK06171 155 QSCYAATKAALNSFTRSWAKELG--KHNIRVVGVAPGILEATGLR 197 (266)
T ss_pred CchhHHHHHHHHHHHHHHHHHhh--hcCeEEEEEeccccccCCCc
Confidence 99999999999999999887643 45679999999988656653
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-19 Score=200.91 Aligned_cols=219 Identities=12% Similarity=0.073 Sum_probs=169.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++++||||+||||+++|+.|+++|+ +|+++.|+.. ..+++... .+.++.+|++|.++++++++++.+.+|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~---~l~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVD---KMEDLASL--GVHPLSLDVTDEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHH---HHHHHHhC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 368999999999999999999999987 5555666532 12233333 37789999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... .+++.+.+.++|+.++++|+.|++.+.+.++|.|++. ..+.||++||..+..+.++...|+++|+
T Consensus 76 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sKa 151 (273)
T PRK06182 76 DVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ---RSGRIINISSMGGKIYTPLGAWYHATKF 151 (273)
T ss_pred CEEEECCCcCC-CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc---CCCEEEEEcchhhcCCCCCccHhHHHHH
Confidence 99999999977 6788899999999999999999999999999998653 3467999999999888899999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---------c-c-------hhHHhhcC-CCCCCHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---------Q-T-------DFYFKSSK-QKVLHENDGLK 456 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---------~-~-------~~~~~~~g-~~~l~~~e~~~ 456 (1152)
++++|++.++.+.. ..++++.+|.+|... ++|...... . . ........ ....++++..+
T Consensus 152 a~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~ 228 (273)
T PRK06182 152 ALEGFSDALRLEVA--PFGIDVVVIEPGGIK-TEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIAD 228 (273)
T ss_pred HHHHHHHHHHHHhc--ccCCEEEEEecCCcc-cccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHH
Confidence 99999998876533 345688888887664 444211000 0 0 00011111 23468899999
Q ss_pred HHHHHHhcCc
Q psy616 457 LFEQLLIQDK 466 (1152)
Q Consensus 457 ~l~~~l~~~~ 466 (1152)
.+.+++....
T Consensus 229 ~i~~~~~~~~ 238 (273)
T PRK06182 229 AISKAVTARR 238 (273)
T ss_pred HHHHHHhCCC
Confidence 9998887653
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-19 Score=201.21 Aligned_cols=222 Identities=13% Similarity=0.119 Sum_probs=173.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+||||.++|++|+++|+. |++++|+. ..+...+.++..+.++.++.||++|.+++.++++++.+.++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGAD-IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999985 55556653 23445555666677899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||.......+.+.+.++|.+++++|+.|++++.+++.+.|++ .++||++||.++..+.++...|+++
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-----~g~iV~isS~~~~~~~~~~~~Y~~s 198 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-----GSAIINTGSITGYEGNETLIDYSAT 198 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-----CCeEEEEecccccCCCCCcchhHHH
Confidence 99999999998642456788999999999999999999999999998742 2579999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-c-ccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-N-EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~-~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|++++.|++.++.+.. ..++++.+|..|.... .+.... . ........... -....+++..+.+..++...
T Consensus 199 K~a~~~l~~~la~~~~--~~gIrv~~i~pG~v~T-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~ 271 (290)
T PRK06701 199 KGAIHAFTRSLAQSLV--QKGIRVNAVAPGPIWT-PLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPD 271 (290)
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEecCCCCC-cccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence 9999999999988643 3456888888776543 332111 0 00111111111 22467889998888877653
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-19 Score=199.71 Aligned_cols=217 Identities=13% Similarity=0.141 Sum_probs=169.2
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++|||||+||||.+++++|+++|+ +|+++.|+... .+.+...+ +.++.+|++|.++++++++.+.+.++++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~---~~~~~~~~--~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAED---VEALAAAG--FTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHH---HHHHHHCC--CeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6899999999999999999999987 55566666422 22333333 568899999999999999999999999999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHH
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 396 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l 396 (1152)
||||||... ...+.+.+.++|++.+++|+.|++++.++++|.|++ ..++||++||+++..+.++.+.|+++|+++
T Consensus 76 vi~~ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~~Y~~sK~al 150 (274)
T PRK05693 76 LINNAGYGA-MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR----SRGLVVNIGSVSGVLVTPFAGAYCASKAAV 150 (274)
T ss_pred EEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh----cCCEEEEECCccccCCCCCccHHHHHHHHH
Confidence 999999876 677888899999999999999999999999999754 236799999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch-----------------hHHhhcCCCCCCHHHHHHHHH
Q psy616 397 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-----------------FYFKSSKQKVLHENDGLKLFE 459 (1152)
Q Consensus 397 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-----------------~~~~~~g~~~l~~~e~~~~l~ 459 (1152)
+.|++.++.+.. ..++++++|..|... +.|......... .........+++++++.+.+.
T Consensus 151 ~~~~~~l~~e~~--~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 227 (274)
T PRK05693 151 HALSDALRLELA--PFGVQVMEVQPGAIA-SQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLL 227 (274)
T ss_pred HHHHHHHHHHhh--hhCeEEEEEecCccc-cccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 999998877632 345688888888764 333221110000 001112234578999999998
Q ss_pred HHHhcCce
Q psy616 460 QLLIQDKI 467 (1152)
Q Consensus 460 ~~l~~~~~ 467 (1152)
.++..+.+
T Consensus 228 ~~~~~~~~ 235 (274)
T PRK05693 228 AAVQQSPR 235 (274)
T ss_pred HHHhCCCC
Confidence 88876654
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=201.38 Aligned_cols=222 Identities=12% Similarity=0.153 Sum_probs=170.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++||||||+||||+.++++|+++|.. |+++.|+... .....+..+.++.++++|++|++++.++++++.+.++++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDR-VVATARDTAT--LADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEECCHHH--HHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999874 6666666422 1111122355688999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
+||||||+.. ..++.+.+.++|++++++|+.+++++.+.+.|.|++. ..++||++||.++..+.+++..|+++|++
T Consensus 80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa 155 (275)
T PRK08263 80 IVVNNAGYGL-FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ---RSGHIIQISSIGGISAFPMSGIYHASKWA 155 (275)
T ss_pred EEEECCCCcc-ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCCEEEEEcChhhcCCCCCccHHHHHHHH
Confidence 9999999987 7788899999999999999999999999999997653 34689999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc----cc-c---cc-hhHHhhcC-CCC-CCHHHHHHHHHHHHhc
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG----NN-E---QT-DFYFKSSK-QKV-LHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~----~~-~---~~-~~~~~~~g-~~~-l~~~e~~~~l~~~l~~ 464 (1152)
++.|++.++.+.. ..++++..|.+|.+....+... .. . .. ........ ... .+|++..+.+..++..
T Consensus 156 ~~~~~~~la~e~~--~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~ 233 (275)
T PRK08263 156 LEGMSEALAQEVA--EFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDA 233 (275)
T ss_pred HHHHHHHHHHHhh--hhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcC
Confidence 9999998877532 2355888888876653222100 00 0 00 00000011 123 6889999999988876
Q ss_pred Cc
Q psy616 465 DK 466 (1152)
Q Consensus 465 ~~ 466 (1152)
+.
T Consensus 234 ~~ 235 (275)
T PRK08263 234 EN 235 (275)
T ss_pred CC
Confidence 54
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-19 Score=197.40 Aligned_cols=223 Identities=12% Similarity=0.128 Sum_probs=174.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||.+++++|+++|.+ |++++|+. ..+.....++. +.++.++.||++|.++++++++++.+++++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999986 77777764 33444445544 667899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||......++.+.+.++|++++++|+.|++.+.+.+.+.|++ ...+.||++||..+..+.++...|+.+|
T Consensus 82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~y~~sk 158 (251)
T PRK07231 82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRG---EGGGAIVNVASTAGLRPRPGLGWYNASK 158 (251)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh---cCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence 9999999998653456778899999999999999999999999999864 2356899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc----cchhHH-hhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----QTDFYF-KSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~~~~~~-~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.+++.+..+.. ..++++.+|.+|.+. +.|...... .....+ +... .....+++....+..++...
T Consensus 159 ~~~~~~~~~~a~~~~--~~~i~v~~i~pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 233 (251)
T PRK07231 159 GAVITLTKALAAELG--PDKIRVNAVAPVVVE-TGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDE 233 (251)
T ss_pred HHHHHHHHHHHHHhh--hhCeEEEEEEECccC-CCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999998877532 236789999998774 444322111 100011 1111 12457899999888887543
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-19 Score=197.87 Aligned_cols=223 Identities=12% Similarity=0.060 Sum_probs=172.6
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
..++++|||||+||||++++++|+++|+.++++.+|+ +..+...+++...+.++.++.||++|.+++.++++++.+.+|
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999998666666654 333455566666677899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||... ..++.+.+.++|++++++|+.|++++.+++.+.|++. ..+.||+++|..+..+.++...|+++
T Consensus 87 ~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~~~s~~~~~~~p~~~~Y~~s 162 (258)
T PRK09134 87 PITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD---ARGLVVNMIDQRVWNLNPDFLSYTLS 162 (258)
T ss_pred CCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCceEEEECchhhcCCCCCchHHHHH
Confidence 9999999999876 5677888999999999999999999999999987542 34679999998777777888899999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|+++..|++.++.+.. ..+++.+|..|..... .... ............ -...++++..+++..++..+
T Consensus 163 K~a~~~~~~~la~~~~---~~i~v~~i~PG~v~t~-~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 231 (258)
T PRK09134 163 KAALWTATRTLAQALA---PRIRVNAIGPGPTLPS-GRQS-PEDFARQHAATPLGRGSTPEEIAAAVRYLLDAP 231 (258)
T ss_pred HHHHHHHHHHHHHHhc---CCcEEEEeecccccCC-cccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence 9999999999887643 1267788887755322 1110 010111111111 12467899999999888754
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-19 Score=206.19 Aligned_cols=212 Identities=17% Similarity=0.121 Sum_probs=161.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+++++||||++|||+++|+.|+++|++ |++++|+ +..++..++++.. +.++.++.+|+++ ++.+.++++.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~ 128 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLN-LVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI 128 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence 4789999999999999999999999985 6666666 3445566666653 3578889999995 2333344444444
Q ss_pred C--CeeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc--CCCCC
Q psy616 312 G--PIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL--GDFGS 386 (1152)
Q Consensus 312 G--~idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~--g~~g~ 386 (1152)
+ ++|++|||||+... ...+.+.+.++|++++++|+.|++.+.++++|.|++. +.+.||++||.++.. +.+++
T Consensus 129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---~~g~IV~iSS~a~~~~~~~p~~ 205 (320)
T PLN02780 129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR---KKGAIINIGSGAAIVIPSDPLY 205 (320)
T ss_pred cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc---CCcEEEEEechhhccCCCCccc
Confidence 4 57799999998641 2467889999999999999999999999999998653 346799999999975 35889
Q ss_pred hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 387 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+.|+++|+++++|++.++.+.. ..++++.+|.+|... +.|.... ...+..++|++.++...+.+..
T Consensus 206 ~~Y~aSKaal~~~~~~L~~El~--~~gI~V~~v~PG~v~-T~~~~~~---------~~~~~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 206 AVYAATKAYIDQFSRCLYVEYK--KSGIDVQCQVPLYVA-TKMASIR---------RSSFLVPSSDGYARAALRWVGY 271 (320)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh--ccCeEEEEEeeCcee-cCccccc---------CCCCCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999988754 446788899888774 4553210 1122357899988888877753
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-19 Score=212.94 Aligned_cols=265 Identities=19% Similarity=0.211 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
.-|+.+++.+||+|||+++++++ .|++|+..... ...+ .+..++..+|+. -|+++|+++|+
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID----~vi~g~~~~~~------------~~~~-~a~~va~~lGl~~~~p~~~V~~~Ca 89 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVD----EVILGQVLTAG------------AGQN-PARQAAIKAGLPHSVPAMTLNKVCG 89 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCC------------CCCc-HHHHHHHHcCCCCCcceEEecccch
Confidence 45778999999999999998887 78888754211 0011 445688999997 49999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH---------------HHHH-----HHh--cCCC-------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---------------AYIA-----MTS--AGML------------- 840 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~---------------~~~~-----~~~--~g~l------------- 840 (1152)
|++.|++.|++.|++|++|.+||+|++.+.. |. .... +.. .+..
T Consensus 90 sg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~g 169 (393)
T PRK05656 90 SGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYG 169 (393)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999985432 10 0000 000 0110
Q ss_pred -C-------------------CCCCcc----cCCC--------------------------------CCCCcc-------
Q psy616 841 -S-------------------PDGKCY----VFDE--------------------------------RANGLV------- 857 (1152)
Q Consensus 841 -s-------------------~~g~~~----~Fd~--------------------------------~a~G~v------- 857 (1152)
+ |+++-+ |+.. .-+|.+
T Consensus 170 itre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt~~~~s~ 249 (393)
T PRK05656 170 ISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTAGNASS 249 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEEccccCC
Confidence 0 233321 1110 023556
Q ss_pred cccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy616 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937 (1152)
Q Consensus 858 ~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~g 937 (1152)
++||++++||++.+.|.+.|++|++.|.|++.... -..+.+.+...+++++|++||++|+||||+|.|.+
T Consensus 250 ~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~----- 319 (393)
T PRK05656 250 LNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV-----DPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEA----- 319 (393)
T ss_pred CCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCc-----
Confidence 89999999999999999999999999999987642 12334457788999999999999999999999976
Q ss_pred CHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccc
Q psy616 938 DPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKS 1017 (1152)
Q Consensus 938 D~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~ 1017 (1152)
+++|..++.+.|+-.. .++.+.+-|..+||+.+|+|+..++.++.+|+.
T Consensus 320 f~~~~~~~~e~lg~~~---~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~---------------------------- 368 (393)
T PRK05656 320 FAAQSLAVGKELGWDA---AKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR---------------------------- 368 (393)
T ss_pred cHHHHHHHHHHhCCCC---ccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH----------------------------
Confidence 7788888888987432 357788999999999999999999999998764
Q ss_pred cccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1018 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1018 ~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
...|+++++...-||.-..+|||.
T Consensus 369 --------~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 369 --------RDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred --------cCCCEEEEEEcccCcceEEEEEec
Confidence 123678888888899999999984
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.1e-19 Score=198.99 Aligned_cols=225 Identities=15% Similarity=0.128 Sum_probs=175.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+|+||+++++.|+++|+. |++++|++ ..++..+.++..+.++.++++|++|.++++++++++.+.+|+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAA-VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999985 55566654 345566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ...+.+.+.++|+..+++|+.|++.+.+.+++.|.+ ..+.+.||++||+.+..+.++...|+++|
T Consensus 85 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~--~~~~~~iv~~ss~~~~~~~~~~~~y~~sk 161 (262)
T PRK13394 85 VDILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYK--DDRGGVVIYMGSVHSHEASPLKSAYVTAK 161 (262)
T ss_pred CCEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHh--hcCCcEEEEEcchhhcCCCCCCcccHHHH
Confidence 999999999876 667778889999999999999999999999999732 23457899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-----------chhHHh--hcCCCCCCHHHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-----------TDFYFK--SSKQKVLHENDGLKLFEQ 460 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-----------~~~~~~--~~g~~~l~~~e~~~~l~~ 460 (1152)
++++.+++.++.+.. ..++++++|.+|.+....+....... ....+. ......+.+++..+++..
T Consensus 162 ~a~~~~~~~la~~~~--~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~ 239 (262)
T PRK13394 162 HGLLGLARVLAKEGA--KHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLF 239 (262)
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 999999998876643 34568889998877644321110000 000010 011235788888888887
Q ss_pred HHhcC
Q psy616 461 LLIQD 465 (1152)
Q Consensus 461 ~l~~~ 465 (1152)
++...
T Consensus 240 l~~~~ 244 (262)
T PRK13394 240 LSSFP 244 (262)
T ss_pred HcCcc
Confidence 77643
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-19 Score=198.05 Aligned_cols=184 Identities=16% Similarity=0.191 Sum_probs=157.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+|+||+++|++|+++|.. |++++|+ +..++...+++..+.++.++.||++|++++.++++++.+.+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAK-VVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999885 4555555 4445566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ...+.+.+.++++..+++|+.|++++.+.+++.|++. ..++||++||..+..+.++++.|+++|
T Consensus 82 ~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~~k 157 (258)
T PRK12429 82 VDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ---GGGRIINMASVHGLVGSAGKAAYVSAK 157 (258)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc---CCeEEEEEcchhhccCCCCcchhHHHH
Confidence 999999999876 6778888999999999999999999999999997653 457899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
+++..+++.++.+.. ..++++.++.+|...
T Consensus 158 ~a~~~~~~~l~~~~~--~~~i~v~~~~pg~v~ 187 (258)
T PRK12429 158 HGLIGLTKVVALEGA--THGVTVNAICPGYVD 187 (258)
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEecCCCc
Confidence 999999998876543 335677788776554
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.9e-19 Score=195.40 Aligned_cols=219 Identities=14% Similarity=0.144 Sum_probs=170.3
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~-~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++||||+||||.++|+.|+++|++ |+++.|+... +...+ ..+.++.++.+|++|.++++++++.+.+.++++|+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHK-VIATGRRQERLQELKD---ELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHH---HhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899999999999999999999884 5666666422 22222 23567889999999999999999999999999999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHH
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 396 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l 396 (1152)
||||||......++.+.+.++|++++++|+.|++.+.+.+.|.|++ ...++||++||..+..+.++...|+++|+++
T Consensus 78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~ 154 (248)
T PRK10538 78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE---RNHGHIINIGSTAGSWPYAGGNVYGATKAFV 154 (248)
T ss_pred EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCcEEEEECCcccCCCCCCCchhHHHHHHH
Confidence 9999997542456778899999999999999999999999999764 2456799999999998889999999999999
Q ss_pred HHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-cccchhHH-hhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 397 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFYF-KSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 397 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~~-~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+.|++.++.+.. ..++++.+|..|...++.+.... ........ ...+..++++++..+.+..++..+
T Consensus 155 ~~~~~~l~~~~~--~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 155 RQFSLNLRTDLH--GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred HHHHHHHHHHhc--CCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCC
Confidence 999999887643 34678888988887645442110 00000000 112335689999999999888654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.4e-19 Score=197.47 Aligned_cols=220 Identities=12% Similarity=0.053 Sum_probs=166.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc----hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL----NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~----~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.++++|||||+||||.++|++|+++|++++++..+... .++..++++..+.++.++++|++|+++++++++.+.+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999976766654422 23344556666778899999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEe-cCCccccCCCCChhh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYF-SSSSAILGDFGSCDY 389 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~-SS~a~~~g~~g~~~Y 389 (1152)
+|++|+||||||... ..++.+.+.++|++++++|+.|++++.+++.|+|.+ .+.++++ ||..+. ..+++..|
T Consensus 87 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~~~iv~~~ss~~~~-~~~~~~~Y 159 (257)
T PRK12744 87 FGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-----NGKIVTLVTSLLGA-FTPFYSAY 159 (257)
T ss_pred hCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-----CCCEEEEecchhcc-cCCCcccc
Confidence 999999999999876 567888999999999999999999999999998642 1335554 665443 45778999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc--h---hHHhhcCC---CCCCHHHHHHHHHHH
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT--D---FYFKSSKQ---KVLHENDGLKLFEQL 461 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~--~---~~~~~~g~---~~l~~~e~~~~l~~~ 461 (1152)
+++|++++.|++.++.+.. ..++++.+|.+|.+... |........ . .......+ +...++|....+..+
T Consensus 160 ~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 236 (257)
T PRK12744 160 AGSKAPVEHFTRAASKEFG--ARGISVTAVGPGPMDTP-FFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFL 236 (257)
T ss_pred hhhHHHHHHHHHHHHHHhC--cCceEEEEEecCccccc-hhccccccchhhcccccccccccccCCCCCHHHHHHHHHHh
Confidence 9999999999999987643 34578999998887543 221110000 0 00000111 346789999999888
Q ss_pred Hhc
Q psy616 462 LIQ 464 (1152)
Q Consensus 462 l~~ 464 (1152)
+..
T Consensus 237 ~~~ 239 (257)
T PRK12744 237 VTD 239 (257)
T ss_pred hcc
Confidence 874
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.8e-19 Score=194.87 Aligned_cols=226 Identities=15% Similarity=0.123 Sum_probs=171.0
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||+||||.+++++|+++|+.++++..|+. ..++...+++..+.++.++++|++|+++++++++++.+.++++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 58999999999999999999999987666556653 23445556666677889999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC-hhhhHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNR 394 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~-~~Yaaana 394 (1152)
+||||||.......+.+.+.++|+..+.+|+.+++++.+.+++.|.+......+.||++||..+..+.+++ ..|+++|+
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~ 161 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG 161 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence 99999998642456788899999999999999999999999999876444445789999999999988875 78999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+.. ..++++++|.++...+..+........ ........+ ...++++..+.+..++..
T Consensus 162 ~~~~~~~~l~~~~~--~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 231 (247)
T PRK09730 162 AIDTLTTGLSLEVA--AQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSD 231 (247)
T ss_pred HHHHHHHHHHHHHH--HhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcCh
Confidence 99999998876532 235688888877665332211111100 000011111 124788888888776653
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=200.51 Aligned_cols=183 Identities=14% Similarity=0.190 Sum_probs=154.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|++|+++|++ |+++.|+.. .++..++ .+.++.++++|++|++++.++++.+.+.+++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGAR-VVIADIKPARARLAALE---IGPAAIAVSLDVTRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHH---hCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999984 555566532 2222222 3456889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ..++.+.+.++|+.++++|+.+++++.+++.+.|.+. ...++||++||..+..+.+++..|+++|
T Consensus 81 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 157 (257)
T PRK07067 81 IDILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQ--GRGGKIINMASQAGRRGEALVSHYCATK 157 (257)
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCCcEEEEeCCHHhCCCCCCCchhhhhH
Confidence 999999999876 6778889999999999999999999999999987542 2346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
+++++|++.++.+.. ..++++++|.+|....
T Consensus 158 ~a~~~~~~~la~e~~--~~gi~v~~i~pg~v~t 188 (257)
T PRK07067 158 AAVISYTQSAALALI--RHGINVNAIAPGVVDT 188 (257)
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEeeCcccc
Confidence 999999999887643 3466888999887653
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=187.93 Aligned_cols=175 Identities=30% Similarity=0.549 Sum_probs=152.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchH-H---HHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS-I---IYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~-~---~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
|+++||||+||||++++++|+++|..++++++|+.... . ..++++..+.++.++.+|+++++++.++++++...++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999987777777764322 1 2355666678889999999999999999999998899
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+|||+||... ...+.+.+.++|+..+++|+.+++++.+++. ....+.||++||..+..+..+...|+++
T Consensus 81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~ii~~ss~~~~~~~~~~~~y~~s 152 (180)
T smart00822 81 PLRGVIHAAGVLD-DGLLANLTPERFAAVLAPKVDGAWNLHELTR-------DLPLDFFVLFSSVAGVLGNPGQANYAAA 152 (180)
T ss_pred CeeEEEEccccCC-ccccccCCHHHHHHhhchHhHHHHHHHHHhc-------cCCcceEEEEccHHHhcCCCCchhhHHH
Confidence 9999999999876 5677888999999999999999999999852 2345789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
|++++.|+++++..+. ++++++||+|.
T Consensus 153 k~~~~~~~~~~~~~~~------~~~~~~~g~~~ 179 (180)
T smart00822 153 NAFLDALAAHRRARGL------PATSINWGAWA 179 (180)
T ss_pred HHHHHHHHHHHHhcCC------ceEEEeecccc
Confidence 9999999999888766 79999999986
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=207.05 Aligned_cols=188 Identities=16% Similarity=0.108 Sum_probs=152.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+++++||||++|||+++|+.|+++|+ +|++++|+ +..++..+++.+. +.++.++.||++|.++++++++++.+.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 579999999999999999999999997 55666666 3345555666543 3578899999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC--------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-------- 383 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-------- 383 (1152)
++||+||||||+.. . ...+.+.+.|+.++.+|+.|.+.|.+.++|.|++. .+.||++||.++..+.
T Consensus 92 ~~iD~li~nAG~~~-~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~----~~riv~vsS~~~~~~~~~~~~~~~ 165 (313)
T PRK05854 92 RPIHLLINNAGVMT-P-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG----RARVTSQSSIAARRGAINWDDLNW 165 (313)
T ss_pred CCccEEEECCcccc-C-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC----CCCeEEEechhhcCCCcCcccccc
Confidence 99999999999865 2 34467889999999999999999999999998642 3579999999887653
Q ss_pred ----CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccc
Q psy616 384 ----FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 430 (1152)
Q Consensus 384 ----~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 430 (1152)
.+...|+.+|.++..|++.++.+....+.++++.+|++|... +.|.
T Consensus 166 ~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~-T~~~ 215 (313)
T PRK05854 166 ERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAP-TNLL 215 (313)
T ss_pred cccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceec-cCcc
Confidence 456789999999999999887542222346799999998775 4453
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.2e-19 Score=196.85 Aligned_cols=221 Identities=13% Similarity=0.113 Sum_probs=166.3
Q ss_pred EEEEECCchhHHHHHHHHHHH----cCCcEEEEecCCc-chHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 238 TYLITGGTGRLGMLFSDYLIN----KYSTNLILSGRSK-LNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~----~Ga~~vil~~R~~-~~~~~~~~l~~--~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
++|||||++|||+++|+.|++ +|+ +|++++|+. ..++..++++. .+.++.++++|++|.++++++++++.+.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS-VLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc-EEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 689999999999999999997 565 667777763 34555666665 2557889999999999999999999888
Q ss_pred cCCe----eEEEEcccccCcCc-ccccC-CHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC
Q psy616 311 IGPI----DGVLHIAGISGLTS-NILEA-NYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 384 (1152)
Q Consensus 311 ~G~i----dgvIh~AG~~~~~~-~~~~~-~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~ 384 (1152)
+|++ |+||||||+..... ...+. +.++|++++++|+.|++.+.+.+.|.|++.. ...+.||++||+++..+.+
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~-~~~~~iv~isS~~~~~~~~ 159 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP-GLNRTVVNISSLCAIQPFK 159 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC-CCCCEEEEECCHHhCCCCC
Confidence 7753 69999999864112 23333 5789999999999999999999999986431 2236799999999999999
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc------ccchhHHhhcC-CCCCCHHHHHHH
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN------EQTDFYFKSSK-QKVLHENDGLKL 457 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~------~~~~~~~~~~g-~~~l~~~e~~~~ 457 (1152)
+.+.|+++|+++++|++.++.+.. ..++++.+|.+|.+. +.|..... ........... -+..+|+|....
T Consensus 160 ~~~~Y~asKaal~~l~~~la~e~~--~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~ 236 (256)
T TIGR01500 160 GWALYCAGKAARDMLFQVLALEEK--NPNVRVLNYAPGVLD-TDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQK 236 (256)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEecCCccc-chHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHH
Confidence 999999999999999999987754 346788888777664 45532110 00001111111 135789999999
Q ss_pred HHHHHh
Q psy616 458 FEQLLI 463 (1152)
Q Consensus 458 l~~~l~ 463 (1152)
+..++.
T Consensus 237 ~~~l~~ 242 (256)
T TIGR01500 237 LLSLLE 242 (256)
T ss_pred HHHHHh
Confidence 888875
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.1e-19 Score=197.15 Aligned_cols=222 Identities=16% Similarity=0.187 Sum_probs=166.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||..+|++|+++|+ +|+++.|+. ..+...+.+...+.++.++.||++|+++++++++++.+.+++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999998 556666653 334455566666778899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHH-HHHhcCCCCCEEEEecCCccccCCCCC----hh
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENT-ILKLQKNKLDFVCYFSSSSAILGDFGS----CD 388 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~-m~~~~~~~~~~iV~~SS~a~~~g~~g~----~~ 388 (1152)
+|+||||||... ..++.+.+.+.|++++++|+.+++++.+++.++ |.+ .+.++||++||.++..+.++. ..
T Consensus 90 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~---~~~~~~v~~sS~~~~~~~~~~~~~~~~ 165 (259)
T PRK08213 90 VDILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIP---RGYGRIINVASVAGLGGNPPEVMDTIA 165 (259)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHh---cCCeEEEEECChhhccCCCccccCcch
Confidence 999999999866 567778899999999999999999999999887 543 234689999999888776554 89
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcCCC-CCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQK-VLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~~-~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|++++.|++.++++.. ..++++.++.++.. ++.+....... .........+. ...+++..+.+..++..
T Consensus 166 Y~~sKa~~~~~~~~~a~~~~--~~gi~v~~v~Pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 240 (259)
T PRK08213 166 YNTSKGAVINFTRALAAEWG--PHGIRVNAIAPGFF-PTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLASD 240 (259)
T ss_pred HHHHHHHHHHHHHHHHHHhc--ccCEEEEEEecCcC-CCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999999998877543 23457777766544 44443211111 11111122221 23577777776666543
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.8e-19 Score=195.26 Aligned_cols=222 Identities=17% Similarity=0.177 Sum_probs=173.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||.++++.|+++|++ |++++|+ +..+...++++..+.++.++.+|++|+++++++++++.+.+++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGAT-VAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999985 4545555 3344555667666778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ...+.+.+.++|+..+.+|+.|++++.+.+.|.|.+. ..++||++||..+..+.++...|+++|
T Consensus 85 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~y~~sK 160 (250)
T PRK12939 85 LDGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS---GRGRIVNLASDTALWGAPKLGAYVASK 160 (250)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCeEEEEECchhhccCCCCcchHHHHH
Confidence 999999999877 6778889999999999999999999999999987653 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-cc-hhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QT-DFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.+++.++.+.. ..++++..|..|... +.|...... .. ........ .....+++..+.+..++..
T Consensus 161 ~~~~~~~~~l~~~~~--~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (250)
T PRK12939 161 GAVIGMTRSLARELG--GRGITVNAIAPGLTA-TEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSD 231 (250)
T ss_pred HHHHHHHHHHHHHHh--hhCEEEEEEEECCCC-CccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 999999998776532 235677888877553 333221111 11 11111111 1246789999988887754
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-19 Score=196.13 Aligned_cols=219 Identities=18% Similarity=0.168 Sum_probs=168.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++++||||+||||.+++++|+++|+ +|++++|+.. ...+..+..+.++.++++|++|.+++..+++.+.+.+|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPA--SLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHH--HHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999998 5666777632 2222223346788899999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ..++.+.+.++|++++++|+.|++++.+++.|+|.+ .+.+|++||.++..|.+++..|+++|+
T Consensus 82 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~i~~~S~~~~~~~~~~~~Y~~sK~ 155 (249)
T PRK06500 82 DAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-----PASIVLNGSINAHIGMPNSSVYAASKA 155 (249)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCEEEEEechHhccCCCCccHHHHHHH
Confidence 99999999876 667888999999999999999999999999998742 256889999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccc-c-ccccch----hHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI-G-NNEQTD----FYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~-~-~~~~~~----~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+.. ..++++.+|.+|......+.. . ...... ...+...+ ...++++..+.+..++..
T Consensus 156 a~~~~~~~la~e~~--~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 230 (249)
T PRK06500 156 ALLSLAKTLSGELL--PRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASD 230 (249)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999998876543 345688899888775432110 0 000001 01111111 234788898888887653
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.1e-19 Score=195.94 Aligned_cols=220 Identities=11% Similarity=0.079 Sum_probs=167.9
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCC--cchHHHHHHHHhCC--CcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFN--NKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~--~~~~~~~~~l~~~g--~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++||||+||||.+++++|+++|++ |+++.|+ +..+.+.+++.... ..+.++++|++|.++++++++++.+++|++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAK-VFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 799999999999999999999984 5555555 22344444554432 245678999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ...+.+.+.++|++++++|+.+++.+.+.++|.|++ .+.++||++||.++..+.+++..|+++|+
T Consensus 81 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~ 156 (251)
T PRK07069 81 SVLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRA---SQPASIVNISSVAAFKAEPDYTAYNASKA 156 (251)
T ss_pred cEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh---cCCcEEEEecChhhccCCCCCchhHHHHH
Confidence 99999999877 677888999999999999999999999999999764 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----ccc-hhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----EQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----~~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+....+.++++.+|.+|... +.|..... ... ....+... ....++++....+..++..
T Consensus 157 a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 232 (251)
T PRK07069 157 AVASLTKSIALDCARRGLDVRCNSIHPTFIR-TGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASD 232 (251)
T ss_pred HHHHHHHHHHHHhcccCCcEEEEEEeecccC-CcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999988764433445788999887664 44432110 000 00111111 1235688888887776543
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.2e-19 Score=203.56 Aligned_cols=227 Identities=13% Similarity=0.076 Sum_probs=168.0
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||++|||+++|+.|+++|+.+|++++|+. ..++..+++...+.++.++.+|++|.++++++++++.+.+|+|
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 679999999999999999999999944677777764 3344555565455678889999999999999999998889999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----------- 383 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~----------- 383 (1152)
|++|||||+........+.+.++|++++++|+.|++.+.+.++|+|++.. ...+.||++||+++..+.
T Consensus 83 D~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 161 (314)
T TIGR01289 83 DALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSP-NKDKRLIIVGSITGNTNTLAGNVPPKANL 161 (314)
T ss_pred CEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCC-CCCCeEEEEecCccccccCCCcCCCcccc
Confidence 99999999864223345678999999999999999999999999986532 123689999999875321
Q ss_pred ----------------------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhH-
Q psy616 384 ----------------------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFY- 440 (1152)
Q Consensus 384 ----------------------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~- 440 (1152)
.+...|+++|+++..+++.+.++.. ...++++++|++|....+.|...........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~-~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~ 240 (314)
T TIGR01289 162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFH-DETGITFASLYPGCIADTGLFREHVPLFRTLF 240 (314)
T ss_pred cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhc-cCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence 2346799999999999988876532 1235789999998775566653321111000
Q ss_pred --H-hhcCCCCCCHHHHHHHHHHHHhc
Q psy616 441 --F-KSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 441 --~-~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+ .......++++++.+.+..++..
T Consensus 241 ~~~~~~~~~~~~~~~~~a~~l~~~~~~ 267 (314)
T TIGR01289 241 PPFQKYITKGYVSEEEAGERLAQVVSD 267 (314)
T ss_pred HHHHHHHhccccchhhhhhhhHHhhcC
Confidence 0 00011247888888888776654
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.4e-19 Score=193.82 Aligned_cols=222 Identities=14% Similarity=0.196 Sum_probs=169.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+.++++|+++|++ |+++.|+. ..++..++++..+.++.++++|++|.++++++++.+.+.+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAK-LALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999985 56666653 345556667666888999999999999999999999888899
Q ss_pred eeEEEEcccccCcCcc--------c-ccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC
Q psy616 314 IDGVLHIAGISGLTSN--------I-LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 384 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~--------~-~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~ 384 (1152)
+|+||||||... ... + .+.+.++|..++++|+.|++++.+.+.|.|.+.. ..+.||++||. +..|.+
T Consensus 83 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~--~~~~iv~~ss~-~~~~~~ 158 (253)
T PRK08217 83 LNGLINNAGILR-DGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESG--SKGVIINISSI-ARAGNM 158 (253)
T ss_pred CCEEEECCCccC-cCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CCeEEEEEccc-cccCCC
Confidence 999999999754 222 2 6778899999999999999999999999986432 33578888886 457888
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhh-cC-CCCCCHHHHHHHHHHHH
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS-SK-QKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~-~g-~~~l~~~e~~~~l~~~l 462 (1152)
+.+.|+++|+++++|++.++.+.. ..+++++++.+|.+.. .|...........+.. .. ....++++..+.+..++
T Consensus 159 ~~~~Y~~sK~a~~~l~~~la~~~~--~~~i~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 235 (253)
T PRK08217 159 GQTNYSASKAGVAAMTVTWAKELA--RYGIRVAAIAPGVIET-EMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFII 235 (253)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHH--HcCcEEEEEeeCCCcC-ccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHH
Confidence 999999999999999998876542 3456889999888754 3322211111111111 11 12357899999998887
Q ss_pred hc
Q psy616 463 IQ 464 (1152)
Q Consensus 463 ~~ 464 (1152)
..
T Consensus 236 ~~ 237 (253)
T PRK08217 236 EN 237 (253)
T ss_pred cC
Confidence 53
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.9e-19 Score=193.14 Aligned_cols=220 Identities=15% Similarity=0.163 Sum_probs=167.7
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc--hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~--~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++|||||+||||+.+|++|+++|. +|+++.|+.. ..+....+...+.++.++++|++|.+++.++++.+.++++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999986 5666666532 122223333345678999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ...+.+.+.++|+.++++|+.|++++.+.+++.|++. +.++||++||..+..+.+++..|+++|+
T Consensus 82 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~Y~~sK~ 157 (245)
T PRK12824 82 DILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ---GYGRIINISSVNGLKGQFGQTNYSAAKA 157 (245)
T ss_pred CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh---CCeEEEEECChhhccCCCCChHHHHHHH
Confidence 99999999876 6778889999999999999999999999999997642 4568999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch-hHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-FYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+.. ..++++..+.+|... +.|......... .......+ ...++++..+.+..++..
T Consensus 158 a~~~~~~~l~~~~~--~~~i~v~~v~pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 226 (245)
T PRK12824 158 GMIGFTKALASEGA--RYGITVNCIAPGYIA-TPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSE 226 (245)
T ss_pred HHHHHHHHHHHHHH--HhCeEEEEEEEcccC-CcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 99999998876543 234577777776554 344321111111 11111112 235788888888776643
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-19 Score=199.60 Aligned_cols=183 Identities=16% Similarity=0.179 Sum_probs=149.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++||||+||||+++|+.|+++|++ |++++|+... .+++.. .+.++.++.+|++|.+++.++++++.+++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~---~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGAR-VAVLDKSAAG---LQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999985 5566665421 222322 3567889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCH----HHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 314 IDGVLHIAGISGLTSNILEANY----KNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~----e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
+|+||||||+.....++.+.+. ++|++++++|+.|++++.+++.|.|.+. .+.||++||.++..+.++...|
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~g~iv~~sS~~~~~~~~~~~~Y 155 (262)
T TIGR03325 80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS----RGSVIFTISNAGFYPNGGGPLY 155 (262)
T ss_pred CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc----CCCEEEEeccceecCCCCCchh
Confidence 9999999997532234444443 5799999999999999999999998642 2569999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 429 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 429 (1152)
+++|+++.+|++.++.+.. . .+++.+|.+|... +.|
T Consensus 156 ~~sKaa~~~l~~~la~e~~--~-~irvn~i~PG~i~-t~~ 191 (262)
T TIGR03325 156 TAAKHAVVGLVKELAFELA--P-YVRVNGVAPGGMS-SDL 191 (262)
T ss_pred HHHHHHHHHHHHHHHHhhc--c-CeEEEEEecCCCc-CCC
Confidence 9999999999999988743 2 3788899888764 444
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=194.04 Aligned_cols=221 Identities=18% Similarity=0.131 Sum_probs=167.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc--
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-- 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-- 311 (1152)
.+++++||||+||||.++|++|+++|+.++++..|+. ..++..+.+...+.++.++.+|++|++++.++++++.+++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3689999999999999999999999987666666664 2334445565556778999999999999999999998887
Q ss_pred ----CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 312 ----GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 312 ----G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
+++|+||||||... ...+.+.+.+.|+.++++|+.|++++.+++.+.|.+ .++||++||..+..+.++++
T Consensus 85 ~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~v~~sS~~~~~~~~~~~ 158 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-----EGRVINISSAEVRLGFTGSI 158 (254)
T ss_pred ccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-----CCEEEEECCHHhcCCCCCCc
Confidence 57999999999876 677888999999999999999999999999988642 25799999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--ccchhH-HhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFY-FKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~-~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|++++.|++.++.+.. ..+++++++.+|.. .+.|..... ...... .....+ ....+++..+.+..++.
T Consensus 159 ~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~~v~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 235 (254)
T PRK12746 159 AYGLSKGALNTMTLPLAKHLG--ERGITVNTIMPGYT-KTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLAS 235 (254)
T ss_pred chHhhHHHHHHHHHHHHHHHh--hcCcEEEEEEECCc-cCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence 999999999999998877532 23457777766544 344432110 000000 111111 23467888888776665
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 236 ~ 236 (254)
T PRK12746 236 S 236 (254)
T ss_pred c
Confidence 3
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.1e-19 Score=196.00 Aligned_cols=187 Identities=17% Similarity=0.227 Sum_probs=159.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++||||+||||..++++|+++|+++|++++|+. .......++...+.++.++.+|+++++++.++++.+.+++|+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999998687878764 334455566667788999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ...+.+.+.++|+.++++|+.|++++.+++++.|.+. ...++||++||.++..+.++...|+++|
T Consensus 85 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK 161 (260)
T PRK06198 85 LDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRR--KAEGTIVNIGSMSAHGGQPFLAAYCASK 161 (260)
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCCEEEEECCcccccCCCCcchhHHHH
Confidence 999999999876 6777889999999999999999999999999998643 2347899999999988889999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
+++++|++.++.+.. ..++++.+|..|....
T Consensus 162 ~a~~~~~~~~a~e~~--~~~i~v~~i~pg~~~t 192 (260)
T PRK06198 162 GALATLTRNAAYALL--RNRIRVNGLNIGWMAT 192 (260)
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEeeccccC
Confidence 999999998877644 3345777777665543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-18 Score=191.99 Aligned_cols=222 Identities=14% Similarity=0.126 Sum_probs=166.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~-~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|+.++++..|+... +.... ..+.++.++++|++|+++++++++++.+.+|+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALAD---ELGDRAIALQADVTDREQVQAMFATATEHFGK 80 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH---HhCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999998666555554321 22222 23457889999999999999999999999987
Q ss_pred -eeEEEEcccccC-----cCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 314 -IDGVLHIAGISG-----LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 314 -idgvIh~AG~~~-----~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
+|+||||||+.. ...++.+.+.++|++++++|+.|++++.+++.|.|.+. ..+.||++||..+..+..+..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~~~ 157 (253)
T PRK08642 81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ---GFGRIINIGTNLFQNPVVPYH 157 (253)
T ss_pred CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc---CCeEEEEECCccccCCCCCcc
Confidence 999999998742 12457788999999999999999999999999987542 236799999988776666788
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
.|+++|++++.|++.++.+.. ..++++.+|.+|......+........ ....+... -...++++..+++..++..
T Consensus 158 ~Y~~sK~a~~~l~~~la~~~~--~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 234 (253)
T PRK08642 158 DYTTAKAALLGLTRNLAAELG--PYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASP 234 (253)
T ss_pred chHHHHHHHHHHHHHHHHHhC--ccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCc
Confidence 999999999999999987643 345688888887665432221111111 11111111 2356889999998888764
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=191.74 Aligned_cols=222 Identities=17% Similarity=0.195 Sum_probs=171.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~----~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.+++++||||+||||+++|++|+++|+.++++..+.. ..++..+++...+.++.++.+|++|.++++++++.+.+.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3688999999999999999999999986555433221 223344455566778999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHH-HHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALE-NTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~-p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
++++|+||||||... ...+.+.+.++|++.+++|+.|++++.+++. +.|+ +...++||++||..+..+.+++..|
T Consensus 85 ~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~~iv~~sS~~~~~~~~~~~~y 160 (249)
T PRK12827 85 FGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR---ARRGGRIVNIASVAGVRGNRGQVNY 160 (249)
T ss_pred hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh---cCCCeEEEEECCchhcCCCCCCchh
Confidence 999999999999877 6778889999999999999999999999998 5543 2345689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCC-CHHHHHHHHHHHHhc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVL-HENDGLKLFEQLLIQ 464 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l-~~~e~~~~l~~~l~~ 464 (1152)
+++|++++.+++.++.+.. ..++++++|.+|... ++|..... ......+......+ ++++..+.+..++..
T Consensus 161 ~~sK~a~~~~~~~l~~~~~--~~~i~~~~i~pg~v~-t~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 232 (249)
T PRK12827 161 AASKAGLIGLTKTLANELA--PRGITVNAVAPGAIN-TPMADNAA-PTEHLLNPVPVQRLGEPDEVAALVAFLVSD 232 (249)
T ss_pred HHHHHHHHHHHHHHHHHhh--hhCcEEEEEEECCcC-CCcccccc-hHHHHHhhCCCcCCcCHHHHHHHHHHHcCc
Confidence 9999999999998877532 235688888877664 44432211 11122222333334 888888888877743
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=192.86 Aligned_cols=221 Identities=16% Similarity=0.151 Sum_probs=167.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||.+++++|+++|+ +|++++|+. ..+...+++...+.++..+.+|++|.++++++++++.+.+|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999987 566666764 334455556655667888999999999999999999999999
Q ss_pred eeEEEEcccccCc--CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 314 IDGVLHIAGISGL--TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~~--~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
+|+||||||+... ..++.+.+.++|++.+++|+.+++++.++++|.|.+. +.+.||++||.+++. +.+.|++
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~---~~~~Y~~ 157 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR---GGGAIVNQSSTAAWL---YSNFYGL 157 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh---CCcEEEEEecccccC---CccccHH
Confidence 9999999998641 3466788999999999999999999999999987543 346799999987754 4578999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
+|++++.|++.++.+.. ..+++++++.+|.+............ .....+... ....++++..+.+..++..
T Consensus 158 sK~a~~~~~~~l~~~~~--~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~ 230 (250)
T PRK07774 158 AKVGLNGLTQQLARELG--GMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSD 230 (250)
T ss_pred HHHHHHHHHHHHHHHhC--ccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence 99999999999877643 34578899999888643321111111 111111111 1235688888887776653
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.5e-19 Score=196.37 Aligned_cols=223 Identities=13% Similarity=0.073 Sum_probs=163.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-CCCcEEEEEecCCCHHHH----HHHHHHHHhh
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-FNNKAIYIQVDVSDKLKM----ISEINSIINN 310 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v----~~~~~~~~~~ 310 (1152)
.+++||||++|||+++++.|+++|+.++++..|. +..+...+++.. .+.++.++.+|++|.+++ +++++.+.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 5899999999999999999999998655554444 333445555643 355788899999999855 5666666778
Q ss_pred cCCeeEEEEcccccCcCcccccCCH-----------HHHHHHHhhhchHHHHHHHHHHHHHHHhc---CCCCCEEEEecC
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANY-----------KNFYSVLSSKISGTIALNYALENTILKLQ---KNKLDFVCYFSS 376 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~-----------e~~~~~~~~kv~g~~~L~~~~~p~m~~~~---~~~~~~iV~~SS 376 (1152)
+|++|+||||||+.. ..++.+.+. ++|.+++++|+.+++++.+++.|+|++.. ....+.||++||
T Consensus 82 ~g~iD~lv~nAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s 160 (267)
T TIGR02685 82 FGRCDVLVNNASAFY-PTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD 160 (267)
T ss_pred cCCceEEEECCccCC-CCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence 899999999999865 344444333 36999999999999999999999985432 122357999999
Q ss_pred CccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc-CccccccccccchhHHhhcC--CCCCCHHH
Q psy616 377 SSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN-NSKFKIGNNEQTDFYFKSSK--QKVLHEND 453 (1152)
Q Consensus 377 ~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~-~~Gm~~~~~~~~~~~~~~~g--~~~l~~~e 453 (1152)
..+..+.++...|+++|+++++|++.++.+.. ..++++.+|.+|... ...|.. ........... ....+|++
T Consensus 161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T TIGR02685 161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELA--PLQIRVNGVAPGLSLLPDAMPF---EVQEDYRRKVPLGQREASAEQ 235 (267)
T ss_pred hhccCCCcccchhHHHHHHHHHHHHHHHHHHh--hhCeEEEEEecCCccCccccch---hHHHHHHHhCCCCcCCCCHHH
Confidence 99988889999999999999999999887743 345688888887642 122221 11111111112 23468999
Q ss_pred HHHHHHHHHhcC
Q psy616 454 GLKLFEQLLIQD 465 (1152)
Q Consensus 454 ~~~~l~~~l~~~ 465 (1152)
..+.+..++...
T Consensus 236 va~~~~~l~~~~ 247 (267)
T TIGR02685 236 IADVVIFLVSPK 247 (267)
T ss_pred HHHHHHHHhCcc
Confidence 999998887543
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-18 Score=191.65 Aligned_cols=224 Identities=16% Similarity=0.196 Sum_probs=174.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||.+++++|+++|+.+++++.|+. ..+...+.+...+.++.++.+|++|.+++.++++.+.+.+|+
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3579999999999999999999999986555536653 334455556656778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+|||+||... ...+.+.+.++|++++++|+.|++++.+.+.|.|.+. ..++||++||..+..|.++...|+++|
T Consensus 84 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~~v~~sS~~~~~~~~~~~~y~~sK 159 (247)
T PRK05565 84 IDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR---KSGVIVNISSIWGLIGASCEVLYSASK 159 (247)
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEECCHhhccCCCCccHHHHHH
Confidence 999999999875 6677888999999999999999999999999987542 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHH-h-hcCCCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-K-SSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~-~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.|++.++.+.. ..++++++|.+|... +++............ . .......++++..+.+..++...
T Consensus 160 ~a~~~~~~~~~~~~~--~~gi~~~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 230 (247)
T PRK05565 160 GAVNAFTKALAKELA--PSGIRVNAVAPGAID-TEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDD 230 (247)
T ss_pred HHHHHHHHHHHHHHH--HcCeEEEEEEECCcc-CccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence 999999988877633 346688899888664 333222111110001 0 11123457888888888777543
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=6e-19 Score=201.77 Aligned_cols=223 Identities=12% Similarity=0.069 Sum_probs=164.9
Q ss_pred EEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 240 LITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 240 LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
|||||++|||+++|+.|+++|..+|++.+|+.. .++..++++..+.++.++++|++|.++++++++++.+.+++||+||
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999446777777643 3344455544456788899999999999999999998889999999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC----------------
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG---------------- 382 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g---------------- 382 (1152)
||||+.....++.+.+.++|+++|++|+.|++++.+.++|.|++.. ...+.||++||+++..+
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~-~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~ 159 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSD-YPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR 159 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCCCEEEEEeccccccccccccCCCccchhhhh
Confidence 9999864233567889999999999999999999999999986532 11468999999887532
Q ss_pred -------------------CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhH---
Q psy616 383 -------------------DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFY--- 440 (1152)
Q Consensus 383 -------------------~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~--- 440 (1152)
..+..+|+++|+++..+++.+.++.. ...++++++|++|...+++|..+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~-~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~ 238 (308)
T PLN00015 160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYH-EETGITFASLYPGCIATTGLFREHIPLFRLLFPP 238 (308)
T ss_pred hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhc-ccCCeEEEEecCCcccCccccccccHHHHHHHHH
Confidence 02456799999998888887766532 1135789999998775667754321111100
Q ss_pred Hhh-cCCCCCCHHHHHHHHHHHHhc
Q psy616 441 FKS-SKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 441 ~~~-~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+.. ..-...+++++.+.+..++..
T Consensus 239 ~~~~~~~~~~~pe~~a~~~~~l~~~ 263 (308)
T PLN00015 239 FQKYITKGYVSEEEAGKRLAQVVSD 263 (308)
T ss_pred HHHHHhcccccHHHhhhhhhhhccc
Confidence 011 111257889999888776654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=194.16 Aligned_cols=221 Identities=17% Similarity=0.182 Sum_probs=165.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-CC-CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-FN-NKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-~g-~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||+||||+++|+.|+++|+. |++++|+ +..++..+++.. .+ ..+.++.||++|++++.++++++.+.+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGI-VIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999985 5555665 333445555533 22 346677999999999999999999999
Q ss_pred CCeeEEEEcccccCc--CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-----
Q psy616 312 GPIDGVLHIAGISGL--TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----- 384 (1152)
Q Consensus 312 G~idgvIh~AG~~~~--~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~----- 384 (1152)
|++|+||||||.... ...+.+.+.++|+.++++|+.+++.+.++++|.|++. +.+.||++||+++..+..
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~ 158 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ---GGGNLVNISSIYGVVAPKFEIYE 158 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc---CCceEEEEechhhhccccchhcc
Confidence 999999999986431 2467788999999999999999999999999998653 235799999988764321
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHh-hcCCCCCCHHHHHHHH
Q psy616 385 -----GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFK-SSKQKVLHENDGLKLF 458 (1152)
Q Consensus 385 -----g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~-~~g~~~l~~~e~~~~l 458 (1152)
....|+++|+++++|++.++.+.. ..++++.+|.+|...+. +. ......... ......+++++..+.+
T Consensus 159 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~i~v~~i~Pg~~~~~-~~---~~~~~~~~~~~~~~~~~~~~dva~~~ 232 (256)
T PRK09186 159 GTSMTSPVEYAAIKAGIIHLTKYLAKYFK--DSNIRVNCVSPGGILDN-QP---EAFLNAYKKCCNGKGMLDPDDICGTL 232 (256)
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHHHhC--cCCeEEEEEecccccCC-CC---HHHHHHHHhcCCccCCCCHHHhhhhH
Confidence 234799999999999998888653 34567888888765432 11 010011111 1123468999999999
Q ss_pred HHHHhcC
Q psy616 459 EQLLIQD 465 (1152)
Q Consensus 459 ~~~l~~~ 465 (1152)
..++...
T Consensus 233 ~~l~~~~ 239 (256)
T PRK09186 233 VFLLSDQ 239 (256)
T ss_pred hheeccc
Confidence 9888643
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-18 Score=190.49 Aligned_cols=221 Identities=15% Similarity=0.128 Sum_probs=172.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||++++++|+++|++++++.+++ .........++..+.++.++.+|+++++++.++++++.+.+++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999999655544443 2233444556666778889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ..++.+.+.++|+..+++|+.|.+++.+++.|.|++ .+.||++||..+..+.+++..|+++|
T Consensus 85 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~Y~~sK 158 (252)
T PRK06077 85 ADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-----GGAIVNIASVAGIRPAYGLSIYGAMK 158 (252)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-----CcEEEEEcchhccCCCCCchHHHHHH
Confidence 999999999876 567778889999999999999999999999998743 25799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc----cchhHHhh-c-CCCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----QTDFYFKS-S-KQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~~~~~~~~-~-g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.|++.++.+.. .++++..+.+|.+.. .|...... ......+. . .-..+.+++..+.+..++...
T Consensus 159 ~~~~~~~~~l~~~~~---~~i~v~~v~Pg~i~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~ 232 (252)
T PRK06077 159 AAVINLTKYLALELA---PKIRVNAIAPGFVKT-KLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIE 232 (252)
T ss_pred HHHHHHHHHHHHHHh---cCCEEEEEeeCCccC-hHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCcc
Confidence 999999999887743 256788888876643 33211000 00011111 0 113588999999999888643
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-18 Score=193.10 Aligned_cols=180 Identities=15% Similarity=0.165 Sum_probs=150.0
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+++|||||+||||++++++|+++|.. |+++.|+.. ..+.+. ..+.++.++++|++|.+++.++++++.+.++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDR-VAATVRRPD---ALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCHH---HHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999999999884 555566532 122222 234578899999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... .....+.+.++|++++++|+.|++++.++++|+|++ ...++||++||..+..+.++.+.|+++|+
T Consensus 78 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 153 (276)
T PRK06482 78 DVVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRR---QGGGRIVQVSSEGGQIAYPGFSLYHATKW 153 (276)
T ss_pred CEEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCEEEEEcCcccccCCCCCchhHHHHH
Confidence 99999999887 667788899999999999999999999999999754 24568999999999888999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
+++.|++.++.+.. ..+++++.+.+|...
T Consensus 154 a~~~~~~~l~~~~~--~~gi~v~~v~pg~~~ 182 (276)
T PRK06482 154 GIEGFVEAVAQEVA--PFGIEFTIVEPGPAR 182 (276)
T ss_pred HHHHHHHHHHHHhh--ccCcEEEEEeCCccc
Confidence 99999998876532 235588888887653
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-18 Score=191.33 Aligned_cols=225 Identities=15% Similarity=0.145 Sum_probs=173.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.+++++||||+||||+++++.|+++|+. |+++.|+ +..+.+..+++..+.++.++.+|+++.+++.++++++.+.+|+
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAK-VVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999984 6666665 3334555666666678899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCC-----CCCEEEEecCCccccCCCCChh
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN-----KLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~-----~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
+|+||||||... ...+.+.+.++|+.++++|+.|++++.+++.|.|.+.... ..+.||++||..+..+.++...
T Consensus 87 ~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~ 165 (258)
T PRK06949 87 IDILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGL 165 (258)
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccH
Confidence 999999999876 6677888999999999999999999999999998654321 1368999999999888888999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--ccchhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|+++..|++.++.+.. ..++++.+|.+|... +.|..... .......+... -..-.|++..+.+..++..
T Consensus 166 Y~~sK~a~~~~~~~la~~~~--~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~ 241 (258)
T PRK06949 166 YCMSKAAVVHMTRAMALEWG--RHGINVNAICPGYID-TEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAAD 241 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hcCeEEEEEeeCCCc-CCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence 99999999999998876532 234688888887664 33322110 10011111111 2345678888888877653
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=220.54 Aligned_cols=218 Identities=13% Similarity=0.196 Sum_probs=176.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||++++++|+++|+ +|++++|+ +..++..++++..+.++.+++||++|.++++++++++.+++|+
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 378999999999999999999999998 55656665 3345566667667788999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccC--CHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 314 IDGVLHIAGISGLTSNILEA--NYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~--~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
+|+||||||... ...+.+. +.++|++++++|+.|++++.+.++|.|++. ..+.||++||+++..+.++++.|++
T Consensus 449 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~ 524 (657)
T PRK07201 449 VDYLVNNAGRSI-RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER---RFGHVVNVSSIGVQTNAPRFSAYVA 524 (657)
T ss_pred CCEEEECCCCCC-CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCCEEEEECChhhcCCCCCcchHHH
Confidence 999999999865 3444333 368999999999999999999999997643 3568999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCce
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
+|+++++|++.++.+.. ..++++++|.+|.+. +.|...... . .....++++++.+.+...+.....
T Consensus 525 sK~a~~~~~~~la~e~~--~~~i~v~~v~pg~v~-T~~~~~~~~-----~--~~~~~~~~~~~a~~i~~~~~~~~~ 590 (657)
T PRK07201 525 SKAALDAFSDVAASETL--SDGITFTTIHMPLVR-TPMIAPTKR-----Y--NNVPTISPEEAADMVVRAIVEKPK 590 (657)
T ss_pred HHHHHHHHHHHHHHHHH--hhCCcEEEEECCcCc-ccccCcccc-----c--cCCCCCCHHHHHHHHHHHHHhCCc
Confidence 99999999999887744 346788999999885 455432110 1 123468999999999988765544
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-18 Score=194.89 Aligned_cols=209 Identities=16% Similarity=0.129 Sum_probs=157.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++||||+ ||||+++|++|+ +|+ +|++++|+. ..++..++++..+.++.+++||++|+++++++++.+ +++|+|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPV 77 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCC
Confidence 578999998 699999999996 776 566666653 334555666666778999999999999999999988 568999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----------- 383 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~----------- 383 (1152)
|+||||||+.. ..++|++++++|+.|++++.+++.|.|++ . +.+|++||.++..+.
T Consensus 78 d~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~---g~iv~isS~~~~~~~~~~~~~~~~~~ 144 (275)
T PRK06940 78 TGLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAP--G---GAGVVIASQSGHRLPALTAEQERALA 144 (275)
T ss_pred CEEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--C---CCEEEEEecccccCcccchhhhcccc
Confidence 99999999753 13679999999999999999999999753 1 457889998887643
Q ss_pred -------------------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-cc----cchh
Q psy616 384 -------------------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NE----QTDF 439 (1152)
Q Consensus 384 -------------------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~----~~~~ 439 (1152)
.++..|+++|+++..|++++..+.. ..++++.+|++|... +.|.... .. ....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gIrvn~i~PG~v~-T~~~~~~~~~~~~~~~~~ 221 (275)
T PRK06940 145 TTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWG--ERGARINSISPGIIS-TPLAQDELNGPRGDGYRN 221 (275)
T ss_pred ccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHc--cCCeEEEEeccCcCc-CccchhhhcCCchHHHHH
Confidence 2578999999999999999887643 456789999988664 4443211 00 0011
Q ss_pred HHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 440 YFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 440 ~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
..+... -+..+|+|...++..++..
T Consensus 222 ~~~~~p~~r~~~peeia~~~~fL~s~ 247 (275)
T PRK06940 222 MFAKSPAGRPGTPDEIAALAEFLMGP 247 (275)
T ss_pred HhhhCCcccCCCHHHHHHHHHHHcCc
Confidence 111111 1346889999998887753
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=214.64 Aligned_cols=222 Identities=10% Similarity=0.110 Sum_probs=170.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||++|||+++|+.|+++|+ +|++++|+.. ...+..+..+.++.++++|++|+++++++++.+.+++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVE--RARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHH--HHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999998 5666666532 2222233346778899999999999999999999999999
Q ss_pred eEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 315 DGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 315 dgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
|+||||||+... ..++.+.+.++|++++++|+.|++.+.++++|+|++.. ..+.||++||.++..+.++...|+++|
T Consensus 81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~~iv~isS~~~~~~~~~~~~Y~asK 158 (520)
T PRK06484 81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG--HGAAIVNVASGAGLVALPKRTAYSASK 158 (520)
T ss_pred CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCCeEEEECCcccCCCCCCCchHHHHH
Confidence 999999998431 34677899999999999999999999999999986532 224799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc----chhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ----TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~----~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.+|++.++.+.. ..++++++|.+|... +.|....... .......... ...++++..+.+..++..
T Consensus 159 aal~~l~~~la~e~~--~~~i~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~ 231 (520)
T PRK06484 159 AAVISLTRSLACEWA--AKGIRVNAVLPGYVR-TQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASD 231 (520)
T ss_pred HHHHHHHHHHHHHhh--hhCeEEEEEccCCcC-chhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999988743 345788899887653 3332211000 0111111111 235788888888877654
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=190.67 Aligned_cols=184 Identities=13% Similarity=0.185 Sum_probs=155.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+|+||.+++++|+++|+. |+++.|+. ..+++.+.++..+.++.++.+|++|.++++++++.+.+.+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAK-VAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999884 55556653 334455556666778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||... ...+.+.+.++|+.++++|+.+++++.+++.+.|++. +.+.||++||..+..+.++...|+++|
T Consensus 81 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~ii~iss~~~~~~~~~~~~Y~~sK 156 (250)
T TIGR03206 81 VDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER---GAGRIVNIASDAARVGSSGEAVYAACK 156 (250)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCeEEEEECchhhccCCCCCchHHHHH
Confidence 999999999876 6778888999999999999999999999999997643 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
++++.|++.++.+.. ..+.++..+..|...
T Consensus 157 ~a~~~~~~~la~~~~--~~~i~v~~v~pg~~~ 186 (250)
T TIGR03206 157 GGLVAFSKTMAREHA--RHGITVNVVCPGPTD 186 (250)
T ss_pred HHHHHHHHHHHHHHh--HhCcEEEEEecCccc
Confidence 999999998877643 234577788877654
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=189.82 Aligned_cols=210 Identities=13% Similarity=0.066 Sum_probs=163.5
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
++++||||+||||.++|++|+++|++ |++++|++. ..+++...+.++.+++||++|.++++++++++.. .+|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~ 74 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQ-VIACGRNQS---VLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF---IPEL 74 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCE-EEEEECCHH---HHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc---CCCE
Confidence 78999999999999999999999985 666677632 2334444455788999999999999999987643 4799
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHH
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 396 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l 396 (1152)
+|||||... .....+.+.++|++++++|+.|++++.+++.|+|.+ .+.||++||+++..+.+++..|+++|+++
T Consensus 75 ~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~iv~isS~~~~~~~~~~~~Y~asK~a~ 148 (240)
T PRK06101 75 WIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-----GHRVVIVGSIASELALPRAEAYGASKAAV 148 (240)
T ss_pred EEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCeEEEEechhhccCCCCCchhhHHHHHH
Confidence 999999754 334456789999999999999999999999998742 35799999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeee
Q psy616 397 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYL 470 (1152)
Q Consensus 397 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~ 470 (1152)
++|++.++.+.. ..++++++|..|... +.|...... ..-..++++++.+.+...+..+.+.+.
T Consensus 149 ~~~~~~l~~e~~--~~gi~v~~v~pg~i~-t~~~~~~~~--------~~~~~~~~~~~a~~i~~~i~~~~~~~~ 211 (240)
T PRK06101 149 AYFARTLQLDLR--PKGIEVVTVFPGFVA-TPLTDKNTF--------AMPMIITVEQASQEIRAQLARGKSHIY 211 (240)
T ss_pred HHHHHHHHHHHH--hcCceEEEEeCCcCC-CCCcCCCCC--------CCCcccCHHHHHHHHHHHHhcCCCEEE
Confidence 999998876533 235588888877664 444321100 011247999999999999988766544
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-18 Score=192.80 Aligned_cols=224 Identities=17% Similarity=0.151 Sum_probs=171.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++||||++||||.+++++|+++|+ +|+++.|+. ..+...+++... +.++.++.+|++|++++.++++++.+++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999998 566667763 334444555443 3578899999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||......++.+.+.++|..++.+|+.+++++.+++.+.|.+. ..+.||++||..+..+.++.+.|++
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~~sS~~~~~~~~~~~~Y~~ 161 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG---GGGSFVGISSIAASNTHRWFGAYGV 161 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEechhhcCCCCCCcchHH
Confidence 9999999999976423567788999999999999999999999999987542 3467999999999888889999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch---hHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD---FYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~---~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+|++++.|++.++.+.. ..+++++.|.+|... +.|......... ....... .....+++..+++..++..+
T Consensus 162 sK~a~~~~~~~~~~~~~--~~~i~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 236 (276)
T PRK05875 162 TKSAVDHLMKLAADELG--PSWVRVNSIRPGLIR-TDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDA 236 (276)
T ss_pred HHHHHHHHHHHHHHHhc--ccCeEEEEEecCccC-CccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCch
Confidence 99999999998876643 345688888887553 333321111000 0111111 12346889999888887654
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-18 Score=189.23 Aligned_cols=217 Identities=14% Similarity=0.060 Sum_probs=168.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC-CCcEEEEEecCCC--HHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF-NNKAIYIQVDVSD--KLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~-g~~v~~~~~Dvsd--~~~v~~~~~~~~~~ 310 (1152)
++++++||||+||||++++++|+++|++ |++++|++ ..+...+++... +.++.++++|+++ .+++.++++++.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGAT-VILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCE-EEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4689999999999999999999999985 66666764 334455555443 3467789999986 57899999999988
Q ss_pred c-CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 311 I-GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 311 ~-G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
+ +++|+||||||......++.+.+.++|++.+++|+.|++++.+++.|.|.+. ..+.||++||..+..+.++...|
T Consensus 84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~---~~~~iv~~ss~~~~~~~~~~~~Y 160 (239)
T PRK08703 84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS---PDASVIFVGESHGETPKAYWGGF 160 (239)
T ss_pred hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC---CCCEEEEEeccccccCCCCccch
Confidence 8 8999999999986534577889999999999999999999999999987543 34679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHh
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~ 463 (1152)
+++|++++.|++.++.+... ..++++..|.+|......+....... .. ....++++....+.+++.
T Consensus 161 ~~sKaa~~~~~~~la~e~~~-~~~i~v~~v~pG~v~t~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~ 226 (239)
T PRK08703 161 GASKAALNYLCKVAADEWER-FGNLRANVLVPGPINSPQRIKSHPGE---AK----SERKSYGDVLPAFVWWAS 226 (239)
T ss_pred HHhHHHHHHHHHHHHHHhcc-CCCeEEEEEecCcccCccccccCCCC---Cc----cccCCHHHHHHHHHHHhC
Confidence 99999999999998876431 12478889998877543221110110 00 123578888888888775
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=191.86 Aligned_cols=218 Identities=13% Similarity=0.125 Sum_probs=162.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++|+||||+||||.+++++|+++|+. |+++.|+.. .+...+++ +. .++++|++|+++++++++++.+.+++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~---~~--~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGAT-VVVGDIDPEAGKAAADEV---GG--LFVPTDVTDEDAVNALFDTAAETYGS 79 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHc---CC--cEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999975 555566532 22222222 22 57899999999999999999999999
Q ss_pred eeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-CChhhhH
Q psy616 314 IDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-g~~~Yaa 391 (1152)
+|+||||||.... ..++.+.+.+.|++.+++|+.|++++.+.+.|+|++. ..++||++||..+..|.+ ++..|++
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~g~iv~~sS~~~~~g~~~~~~~Y~~ 156 (255)
T PRK06057 80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ---GKGSIINTASFVAVMGSATSQISYTA 156 (255)
T ss_pred CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh---CCcEEEEEcchhhccCCCCCCcchHH
Confidence 9999999997641 2456778999999999999999999999999998653 346799999998888764 7889999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-cch---hHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QTD---FYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~~---~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
+|++++.+++.++.+.. ..++++.+|.+|.+.. .|...... ... ....... -...++++..+.+..++..
T Consensus 157 sKaal~~~~~~l~~~~~--~~gi~v~~i~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~ 231 (255)
T PRK06057 157 SKGGVLAMSRELGVQFA--RQGIRVNALCPGPVNT-PLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASD 231 (255)
T ss_pred HHHHHHHHHHHHHHHHH--hhCcEEEEEeeCCcCC-chhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999998776543 2356888998887753 33221100 000 0011111 1346788888887776653
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.8e-18 Score=187.32 Aligned_cols=223 Identities=16% Similarity=0.215 Sum_probs=169.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||.+++++|+++|++++++.++... .+....+++..+.++.++.+|++|.+++.++++++.+.+++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999866555554432 34455566666778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+|||+||... ...+.+.+.+.|++.+.+|+.+++++.+++.+.+.+. +.+.||++||..+..|.++...|+++|
T Consensus 84 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~~v~iss~~~~~~~~~~~~y~~sk 159 (248)
T PRK05557 84 VDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ---RSGRIINISSVVGLMGNPGQANYAASK 159 (248)
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCeEEEEEcccccCcCCCCCchhHHHH
Confidence 999999999877 5677788999999999999999999999999986542 345699999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhc-CCCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSS-KQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~-g~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++..+.+|... ++|....... ........ .-....+++....+..++..
T Consensus 160 ~a~~~~~~~~a~~~~--~~~i~~~~v~pg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 229 (248)
T PRK05557 160 AGVIGFTKSLARELA--SRGITVNAVAPGFIE-TDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASD 229 (248)
T ss_pred HHHHHHHHHHHHHhh--hhCeEEEEEecCccC-CccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999887765432 335678888887653 3332211111 11111111 11235778888777766643
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.7e-19 Score=199.05 Aligned_cols=222 Identities=13% Similarity=0.070 Sum_probs=156.4
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHH----------HHHHhCCC-----cEEEEEecCCCH
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIY----------KKLKKFNN-----KAIYIQVDVSDK 297 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~----------~~l~~~g~-----~v~~~~~Dvsd~ 297 (1152)
.+|++||||++ +|||+++|+.|+++|+++++.. +.+...... ......|. ++..+.+|+++.
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~ 85 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGT-WVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP 85 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEe-ccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence 68999999995 9999999999999998766643 221110000 00001111 111223343333
Q ss_pred ------------------HHHHHHHHHHHhhcCCeeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHH
Q psy616 298 ------------------LKMISEINSIINNIGPIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALEN 358 (1152)
Q Consensus 298 ------------------~~v~~~~~~~~~~~G~idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p 358 (1152)
++++++++++.++||+||+||||||+... ..++.+++.++|++++++|+.|++++.++++|
T Consensus 86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 36899999999999999999999997531 36788999999999999999999999999999
Q ss_pred HHHHhcCCCCCEEEEecCCccccCCCCCh-hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--c
Q psy616 359 TILKLQKNKLDFVCYFSSSSAILGDFGSC-DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--E 435 (1152)
Q Consensus 359 ~m~~~~~~~~~~iV~~SS~a~~~g~~g~~-~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~ 435 (1152)
+|++ .+.||++||+++..+.++.. .|+++|+++.+|++.++.+... ..++++.+|.+|.... .|..... .
T Consensus 166 ~m~~-----~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~-~~gIrVn~V~PG~v~T-~~~~~~~~~~ 238 (299)
T PRK06300 166 IMNP-----GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGR-RWGIRVNTISAGPLAS-RAGKAIGFIE 238 (299)
T ss_pred Hhhc-----CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEEEEeCCccC-hhhhcccccH
Confidence 9853 25699999999999988875 8999999999999999987431 1367888999887653 3322110 0
Q ss_pred cc-hhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 436 QT-DFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 436 ~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
.. ........ .+..++++...++..++..
T Consensus 239 ~~~~~~~~~~p~~r~~~peevA~~v~~L~s~ 269 (299)
T PRK06300 239 RMVDYYQDWAPLPEPMEAEQVGAAAAFLVSP 269 (299)
T ss_pred HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 10 11111111 2346789988888877653
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=185.84 Aligned_cols=226 Identities=19% Similarity=0.172 Sum_probs=186.2
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~--~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.+.++||||++|||+++|..+..+|+.+-++.+......+..+.|+- .-..|.+.++|+.|.+++..++++++..+|+
T Consensus 33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 37899999999999999999999998666655544555666666542 2234889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|.+|||||+.- .+.+.+.+.++++..+++|..|+++..++.++.|++. .+.+.|+++||.++.+|..|.++|+++|
T Consensus 113 ~d~l~~cAG~~v-~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~--~~~g~I~~vsS~~a~~~i~GysaYs~sK 189 (331)
T KOG1210|consen 113 IDNLFCCAGVAV-PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKR--EHLGRIILVSSQLAMLGIYGYSAYSPSK 189 (331)
T ss_pred cceEEEecCccc-ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcc--ccCcEEEEehhhhhhcCcccccccccHH
Confidence 999999999998 7899999999999999999999999999999998753 3345899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch-hHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-FYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++.+|++.++++.. ..++.+....++.....|+...+..... ...-..+-..+.++|+..++..-+..+.
T Consensus 190 ~alrgLa~~l~qE~i--~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~rg~ 261 (331)
T KOG1210|consen 190 FALRGLAEALRQELI--KYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKRGN 261 (331)
T ss_pred HHHHHHHHHHHHHHh--hcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhhcC
Confidence 999999999999876 4577888888888888887654322111 1122334556899999988877666554
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-18 Score=182.75 Aligned_cols=189 Identities=16% Similarity=0.124 Sum_probs=154.8
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
++|||||++|||.++++.|+++ .+|++.+|+.. .++||++|++++++++++ +|++|+|
T Consensus 2 ~vlItGas~giG~~la~~l~~~--~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~----~~~id~l 59 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR--HEVITAGRSSG----------------DVQVDITDPASIRALFEK----VGKVDAV 59 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc--CcEEEEecCCC----------------ceEecCCChHHHHHHHHh----cCCCCEE
Confidence 6899999999999999999998 57777777642 468999999999988765 5799999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHHH
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 397 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~ 397 (1152)
|||||... ..++.+.+.++|++.+++|+.|++++.+++.|+|++ .+.|+++||+.+..+.+++..|+++|++++
T Consensus 60 v~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~ 133 (199)
T PRK07578 60 VSAAGKVH-FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-----GGSFTLTSGILSDEPIPGGASAATVNGALE 133 (199)
T ss_pred EECCCCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCeEEEEcccccCCCCCCchHHHHHHHHHH
Confidence 99999876 677888999999999999999999999999999742 367999999999999999999999999999
Q ss_pred HHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 398 VYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 398 ~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+|++.++.+. ..++++.+|.+|.. ++.|.... .. ..+...+++++..+.+..++...
T Consensus 134 ~~~~~la~e~---~~gi~v~~i~Pg~v-~t~~~~~~-----~~--~~~~~~~~~~~~a~~~~~~~~~~ 190 (199)
T PRK07578 134 GFVKAAALEL---PRGIRINVVSPTVL-TESLEKYG-----PF--FPGFEPVPAARVALAYVRSVEGA 190 (199)
T ss_pred HHHHHHHHHc---cCCeEEEEEcCCcc-cCchhhhh-----hc--CCCCCCCCHHHHHHHHHHHhccc
Confidence 9999998774 23568888876654 44442110 00 12345789999999998888643
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5e-18 Score=187.33 Aligned_cols=214 Identities=17% Similarity=0.097 Sum_probs=170.0
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++||||+||||++++++|+++|+. |++++|++. .+...+++... +.++.+++||++|+++++++++++.+ .+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGAR-LYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence 68999999999999999999999875 555666643 33444444433 46789999999999999999998765 46
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ...+.+.+.+++.+.+++|+.|++++.+++.|.|.+. +.+.||++||..+..+.++...|+++|+
T Consensus 78 d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 153 (243)
T PRK07102 78 DIVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFEAR---GSGTIVGISSVAGDRGRASNYVYGSAKA 153 (243)
T ss_pred CEEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC---CCCEEEEEecccccCCCCCCcccHHHHH
Confidence 99999999877 5677888999999999999999999999999997543 3467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 469 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~ 469 (1152)
++++|++.++.+.. ..++++.+|.++... +.|.... ...+...+++++..+.+.+.+..+...+
T Consensus 154 a~~~~~~~l~~el~--~~gi~v~~v~pg~v~-t~~~~~~--------~~~~~~~~~~~~~a~~i~~~~~~~~~~i 217 (243)
T PRK07102 154 ALTAFLSGLRNRLF--KSGVHVLTVKPGFVR-TPMTAGL--------KLPGPLTAQPEEVAKDIFRAIEKGKDVI 217 (243)
T ss_pred HHHHHHHHHHHHhh--ccCcEEEEEecCccc-Chhhhcc--------CCCccccCCHHHHHHHHHHHHhCCCCEE
Confidence 99999999876533 345688899887764 3442211 1112346889999999999998765443
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-18 Score=188.70 Aligned_cols=223 Identities=16% Similarity=0.120 Sum_probs=172.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||.+++++|+++|+ +|+++.|+ ....+..+.++..+.++.++.+|++|.++++++++++..++++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999988 55666665 3334555667666778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-cCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-~g~~g~~~Yaaa 392 (1152)
+|+||||||... ..++.+.+.++|+..+++|+.+++++.+.+.|.|++. ..+.||++||..+. .+.++...|+++
T Consensus 84 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~ii~~ss~~~~~~~~~~~~~y~~s 159 (251)
T PRK12826 84 LDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA---GGGRIVLTSSVAGPRVGYPGLAHYAAS 159 (251)
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCcEEEEEechHhhccCCCCccHHHHH
Confidence 999999999887 6777888999999999999999999999999997653 24679999999988 788889999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
|++++.+++.++.+.. ..+++++.|.++.+.+.++....... .........+ ...++++....+..++..
T Consensus 160 K~a~~~~~~~~~~~~~--~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (251)
T PRK12826 160 KAGLVGFTRALALELA--ARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASD 231 (251)
T ss_pred HHHHHHHHHHHHHHHH--HcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999988766532 23458888888877654432111110 0111111121 346788888887776643
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-18 Score=187.04 Aligned_cols=183 Identities=17% Similarity=0.146 Sum_probs=156.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC--
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG-- 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G-- 312 (1152)
+++.++|||+-+|+|+.+|++|.++|..++.-+-.++..+.+..+.+ ..+...++.|||++++++++.+.+.+..+
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 57899999999999999999999999988777744443344444332 56778889999999999999998887764
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
.+-+||||||+....++.+-.+.++|++++++|+.|+..++++++|++++. .++||++||+.|..+.++.+.|+++
T Consensus 106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a----rGRvVnvsS~~GR~~~p~~g~Y~~S 181 (322)
T KOG1610|consen 106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA----RGRVVNVSSVLGRVALPALGPYCVS 181 (322)
T ss_pred cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc----cCeEEEecccccCccCcccccchhh
Confidence 599999999987656777888999999999999999999999999998763 4669999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
|+++++|+..+|++-. ..++.+..|.+|...
T Consensus 182 K~aVeaf~D~lR~EL~--~fGV~VsiiePG~f~ 212 (322)
T KOG1610|consen 182 KFAVEAFSDSLRRELR--PFGVKVSIIEPGFFK 212 (322)
T ss_pred HHHHHHHHHHHHHHHH--hcCcEEEEeccCccc
Confidence 9999999999998865 557788889888554
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-18 Score=198.10 Aligned_cols=221 Identities=13% Similarity=0.062 Sum_probs=161.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||+||||+++|+.|+++|+ +|++++|+. ..++..+++... +.++.++.+|++|.++++++++++.+++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 579999999999999999999999998 566667763 333444555432 4578899999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc----------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---------- 381 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~---------- 381 (1152)
|++|+||||||+.. . ....+.++|+..+++|+.|++.+.+.++|.|++. ..+.||++||.++..
T Consensus 94 ~~iD~li~nAg~~~-~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~---~~~~iV~vSS~~~~~~~~~~~~~~~ 167 (306)
T PRK06197 94 PRIDLLINNAGVMY-T--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV---PGSRVVTVSSGGHRIRAAIHFDDLQ 167 (306)
T ss_pred CCCCEEEECCcccc-C--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC---CCCEEEEECCHHHhccCCCCccccC
Confidence 99999999999865 2 2356778899999999999999999999997643 345799999987654
Q ss_pred ---CCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcC-CCCCCHHHHHHH
Q psy616 382 ---GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK-QKVLHENDGLKL 457 (1152)
Q Consensus 382 ---g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g-~~~l~~~e~~~~ 457 (1152)
+..+...|+++|+++..|++.++.+....+.++.++++++|.. .+.|...........+...+ +...+++++...
T Consensus 168 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 246 (306)
T PRK06197 168 WERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVS-NTELARNLPRALRPVATVLAPLLAQSPEMGALP 246 (306)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcc-cCcccccCcHHHHHHHHHHHhhhcCCHHHHHHH
Confidence 1235678999999999999988776433344566667777755 45564332211111111111 123467777665
Q ss_pred HHHHHh
Q psy616 458 FEQLLI 463 (1152)
Q Consensus 458 l~~~l~ 463 (1152)
+..+..
T Consensus 247 ~~~~~~ 252 (306)
T PRK06197 247 TLRAAT 252 (306)
T ss_pred HHHHhc
Confidence 554443
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=192.96 Aligned_cols=178 Identities=16% Similarity=0.214 Sum_probs=149.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||+||||.++++.|+++|++ |+++.|+... ..+.++.+++||++|+++++++++++.+.+|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~r~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 78 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGAR-VVTTARSRPD--------DLPEGVEFVAADLTTAEGCAAVARAVLERLGGV 78 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCE-EEEEeCChhh--------hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999885 6666666421 123468899999999999999999999999999
Q ss_pred eEEEEcccccC-cCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-CChhhhHH
Q psy616 315 DGVLHIAGISG-LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYAMG 392 (1152)
Q Consensus 315 dgvIh~AG~~~-~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-g~~~Yaaa 392 (1152)
|+||||||... ....+.+.+.++|++.+++|+.|++.+.++++|.|++. ..+.||++||+.+..+.+ +...|+++
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~ii~isS~~~~~~~~~~~~~Y~~s 155 (260)
T PRK06523 79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR---GSGVIIHVTSIQRRLPLPESTTAYAAA 155 (260)
T ss_pred CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc---CCcEEEEEecccccCCCCCCcchhHHH
Confidence 99999999753 13567788999999999999999999999999998653 346799999999988865 88999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
|+++++|++.++.+.. ..++++.+|.+|....
T Consensus 156 K~a~~~l~~~~a~~~~--~~gi~v~~i~Pg~v~t 187 (260)
T PRK06523 156 KAALSTYSKSLSKEVA--PKGVRVNTVSPGWIET 187 (260)
T ss_pred HHHHHHHHHHHHHHHh--hcCcEEEEEecCcccC
Confidence 9999999999887643 3456888898876643
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=5e-18 Score=188.16 Aligned_cols=214 Identities=15% Similarity=0.146 Sum_probs=167.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||+||||+.++++|+++|++ |+++.|+. +...+.++.++++|++|++++.++++++.+++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~-v~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAK-VIGFDQAF--------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecch--------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999985 55555553 23346678899999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|.||||||... ..++.+.+.++|++++++|+.+++++.+++.|.|++. ..++||++||..+..+.++.+.|+++|+
T Consensus 78 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~~ss~~~~~~~~~~~~Y~~sK~ 153 (252)
T PRK08220 78 DVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ---RSGAIVTVGSNAAHVPRIGMAAYGASKA 153 (252)
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC---CCCEEEEECCchhccCCCCCchhHHHHH
Confidence 99999999876 6778888999999999999999999999999997642 3467999999999988899999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-cc--ch-------hHHh-h-cCCCCCCHHHHHHHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQ--TD-------FYFK-S-SKQKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~--~~-------~~~~-~-~g~~~l~~~e~~~~l~~~l 462 (1152)
+++.|+++++.+.. ..++++.+|..|...+. |..... .. .. ..++ . .......+++..+.+..++
T Consensus 154 a~~~~~~~la~e~~--~~~i~v~~i~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 230 (252)
T PRK08220 154 ALTSLAKCVGLELA--PYGVRCNVVSPGSTDTD-MQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLA 230 (252)
T ss_pred HHHHHHHHHHHHhh--HhCeEEEEEecCcCcch-hhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHh
Confidence 99999999887643 34568888887766433 211100 00 00 0011 1 1124567889888888777
Q ss_pred hc
Q psy616 463 IQ 464 (1152)
Q Consensus 463 ~~ 464 (1152)
..
T Consensus 231 ~~ 232 (252)
T PRK08220 231 SD 232 (252)
T ss_pred cc
Confidence 53
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=190.90 Aligned_cols=222 Identities=16% Similarity=0.108 Sum_probs=171.4
Q ss_pred CCc--hhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhc-CCeeEE
Q psy616 243 GGT--GRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNI-GPIDGV 317 (1152)
Q Consensus 243 Gg~--gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-G~idgv 317 (1152)
|++ +|||+++|+.|+++|++ |++++|+. ..+...+++.+ .+.+ ++.||++|+++++++++++.+++ |+||++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~-V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l 77 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGAN-VILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDIL 77 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEE-EEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred CCCCCCChHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence 556 99999999999999985 55556654 33444455543 4555 59999999999999999999999 999999
Q ss_pred EEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 318 LHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 318 Ih~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|||+|.... ..++.+.+.++|++.++.|+.+++.+.+++.|+|++ .+.||++||+++..+.++...|+++|+
T Consensus 78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~gsii~iss~~~~~~~~~~~~y~~sKa 152 (241)
T PF13561_consen 78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK-----GGSIINISSIAAQRPMPGYSAYSASKA 152 (241)
T ss_dssp EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----EEEEEEEEEGGGTSBSTTTHHHHHHHH
T ss_pred EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CCCcccccchhhcccCccchhhHHHHH
Confidence 999998762 367888999999999999999999999999998764 266999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccC-CCceEEEEeCCcccCccccccc---cccchhHHhhcCCCC-CCHHHHHHHHHHHHhcC----
Q psy616 395 FQTVYAKYLNNKNIYKK-YTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQKV-LHENDGLKLFEQLLIQD---- 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~-~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~~~-l~~~e~~~~l~~~l~~~---- 465 (1152)
++.+|++++..+.. . .++++.+|.+|+.... |.... ++......+...+.. .+|+|...++..++...
T Consensus 153 al~~l~r~lA~el~--~~~gIrVN~V~pG~i~t~-~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~i 229 (241)
T PF13561_consen 153 ALEGLTRSLAKELA--PKKGIRVNAVSPGPIETP-MTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYI 229 (241)
T ss_dssp HHHHHHHHHHHHHG--GHGTEEEEEEEESSBSSH-HHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTG
T ss_pred HHHHHHHHHHHHhc--cccCeeeeeecccceecc-chhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCc
Confidence 99999999988754 4 4678888888877643 22111 111222233444433 68999999998887644
Q ss_pred ceeeeeechh
Q psy616 466 KIQYLVLSGE 475 (1152)
Q Consensus 466 ~~~~~v~~~~ 475 (1152)
..+.+.+++-
T Consensus 230 tG~~i~vDGG 239 (241)
T PF13561_consen 230 TGQVIPVDGG 239 (241)
T ss_dssp TSEEEEESTT
T ss_pred cCCeEEECCC
Confidence 2366666654
|
... |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.2e-18 Score=185.50 Aligned_cols=223 Identities=17% Similarity=0.148 Sum_probs=172.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+.+++|||||+|+||.+++++|+++|..++++.++... .+...+.+...+.++.++.+|++|.+++.++++++.+.+++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999999965554555432 23344556666778999999999999999999999888999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+|||+||... ...+.+.+.++|+..+++|+.+++++.+.+.+++++. ..++||++||..+..+..+...|+.+|
T Consensus 85 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~~i~~SS~~~~~~~~~~~~y~~sK 160 (249)
T PRK12825 85 IDILVNNAGIFE-DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ---RGGRIVNISSVAGLPGWPGRSNYAAAK 160 (249)
T ss_pred CCEEEECCccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCCEEEEECccccCCCCCCchHHHHHH
Confidence 999999999876 6778888999999999999999999999999987543 356899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHh---hcCCCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFK---SSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~---~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.+++....+.. ..+++++.|..|...+..+ ...... ..... ..-...+++++..+.+..++..+
T Consensus 161 ~~~~~~~~~~~~~~~--~~~i~~~~i~pg~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~ 231 (249)
T PRK12825 161 AGLVGLTKALARELA--EYGITVNMVAPGDIDTDMK-EATIEE-AREAKDAETPLGRSGTPEDIARAVAFLCSDA 231 (249)
T ss_pred HHHHHHHHHHHHHHh--hcCeEEEEEEECCccCCcc-ccccch-hHHhhhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999987766532 2356888888776654332 211111 10011 01112467889999888887543
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.1e-18 Score=187.22 Aligned_cols=179 Identities=12% Similarity=0.110 Sum_probs=147.9
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH-HHhhc---C
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS-IINNI---G 312 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~-~~~~~---G 312 (1152)
.++|||||+||||+++|++|+++|++ |+++.|+...+ . ....+.++.++++|++|.+++++++++ +.+.+ +
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~-v~~~~r~~~~~-~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIA-VLGVARSRHPS-L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCE-EEEEecCcchh-h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 36999999999999999999999985 55566654321 1 233466789999999999999998877 55544 4
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|++|||||......++.+.+.++|++++++|+.|++.+.+.+.+.|.+ ...++||++||+.+..+.++...|+++
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y~~s 153 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASD---AAERRILHISSGAARNAYAGWSVYCAT 153 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhc---cCCCEEEEEeChhhcCCCCCchHHHHH
Confidence 79999999998653356778899999999999999999999999998754 234689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
|+++++|++.++.+ . ..++++.+|.+|.+..
T Consensus 154 K~a~~~~~~~~~~~-~--~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 154 KAALDHHARAVALD-A--NRALRIVSLAPGVVDT 184 (243)
T ss_pred HHHHHHHHHHHHhc-C--CCCcEEEEecCCcccc
Confidence 99999999998876 2 3467899998887753
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-18 Score=211.94 Aligned_cols=224 Identities=16% Similarity=0.193 Sum_probs=172.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhC-C-CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF-N-NKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~-g-~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||+||||+++|++|+++|+ +|+++.|+ +..+...+++... + .++..++||++|.++++++++++.+.+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 479999999999999999999999998 45555555 3334444555432 2 367889999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||+.. ..++.+.+.++|+..+++|+.|.+++.+.+++.|++. ...+.||++||..+..+.+++..|++
T Consensus 492 g~iDilV~nAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~--~~~g~IV~iSS~~a~~~~~~~~aY~a 568 (676)
T TIGR02632 492 GGVDIVVNNAGIAT-SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQ--GLGGNIVFIASKNAVYAGKNASAYSA 568 (676)
T ss_pred CCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEEeChhhcCCCCCCHHHHH
Confidence 99999999999876 6778889999999999999999999999999998643 22467999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCccc-Ccccccccc------------cc-chhHHhhcC-CCCCCHHHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN-NSKFKIGNN------------EQ-TDFYFKSSK-QKVLHENDGLK 456 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~-~~Gm~~~~~------------~~-~~~~~~~~g-~~~l~~~e~~~ 456 (1152)
+|++++.|++.++.+.. ..++++.+|+++... +.+|..... .. ...+..+.. -..+++++..+
T Consensus 569 SKaA~~~l~r~lA~el~--~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~ 646 (676)
T TIGR02632 569 AKAAEAHLARCLAAEGG--TYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAE 646 (676)
T ss_pred HHHHHHHHHHHHHHHhc--ccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHH
Confidence 99999999999887643 345688888887653 233321100 00 011111111 13468899999
Q ss_pred HHHHHHhc
Q psy616 457 LFEQLLIQ 464 (1152)
Q Consensus 457 ~l~~~l~~ 464 (1152)
++..++..
T Consensus 647 av~~L~s~ 654 (676)
T TIGR02632 647 AVFFLASS 654 (676)
T ss_pred HHHHHhCC
Confidence 88887653
|
|
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-19 Score=173.76 Aligned_cols=187 Identities=16% Similarity=0.203 Sum_probs=154.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++-+.|||||.+|+|++.|+.|+++|+.++++.--+...++..++ .|.++.+.++||+++.+++.+++.+..+||++
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vake---lg~~~vf~padvtsekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKE---LGGKVVFTPADVTSEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHH---hCCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence 577899999999999999999999999888776555444555444 48899999999999999999999999999999
Q ss_pred eEEEEcccccCcCccc-----ccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhc---CCCCCEEEEecCCccccCCCCC
Q psy616 315 DGVLHIAGISGLTSNI-----LEANYKNFYSVLSSKISGTIALNYALENTILKLQ---KNKLDFVCYFSSSSAILGDFGS 386 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~-----~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~---~~~~~~iV~~SS~a~~~g~~g~ 386 (1152)
|..+||||+....+.+ ...+.|+|++++++|+.|+++++++..-+|-+.. .+..+.||+..|++++-|..||
T Consensus 85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq 164 (260)
T KOG1199|consen 85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ 164 (260)
T ss_pred eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch
Confidence 9999999986532222 2347899999999999999999999888774332 2345789999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 387 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
++|+++|.++-+++--..+... +.+++..+|.+|.+..
T Consensus 165 aaysaskgaivgmtlpiardla--~~gir~~tiapglf~t 202 (260)
T KOG1199|consen 165 AAYSASKGAIVGMTLPIARDLA--GDGIRFNTIAPGLFDT 202 (260)
T ss_pred hhhhcccCceEeeechhhhhcc--cCceEEEeecccccCC
Confidence 9999999999887665554433 3455889999998853
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=183.53 Aligned_cols=215 Identities=16% Similarity=0.172 Sum_probs=169.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.+++++||||+|+||.+++++|+++|.. |++++|++ ...+..+++... .++.++++|++|.+++.++++.+.+.+++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYK-VAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999885 66666764 233444555443 56889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+|||+||... ...+.+.+.++|++.+++|+.|++++.+++++.|++ ..++||++||.++..+..+...|+++|
T Consensus 83 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~~iv~~ss~~~~~~~~~~~~y~~sk 157 (237)
T PRK07326 83 LDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR----GGGYIINISSLAGTNFFAGGAAYNASK 157 (237)
T ss_pred CCEEEECCCCCC-CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH----CCeEEEEECChhhccCCCCCchHHHHH
Confidence 999999999876 677888999999999999999999999999988732 346899999999988888899999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++..+++.+..+.. ..+.++++|..+...+. +..... . .. ....+++++..+.+..++..+.
T Consensus 158 ~a~~~~~~~~~~~~~--~~gi~v~~v~pg~~~t~-~~~~~~--~----~~-~~~~~~~~d~a~~~~~~l~~~~ 220 (237)
T PRK07326 158 FGLVGFSEAAMLDLR--QYGIKVSTIMPGSVATH-FNGHTP--S----EK-DAWKIQPEDIAQLVLDLLKMPP 220 (237)
T ss_pred HHHHHHHHHHHHHhc--ccCcEEEEEeeccccCc-cccccc--c----hh-hhccCCHHHHHHHHHHHHhCCc
Confidence 999999998765432 23457888887655432 211110 0 00 1123789999999999887664
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.9e-18 Score=193.48 Aligned_cols=194 Identities=12% Similarity=0.049 Sum_probs=151.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++++.|+++|+ +|++++|+. ..++..+++...+.++.++.+|++|.++++++++++.+.+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999997 566666663 334455556444567889999999999999999998887889
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-----------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG----------- 382 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g----------- 382 (1152)
||+||||||+........+.+.++|+.++++|+.|+++|.++++|.|++... ..+.||++||.+...+
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-~~~riV~vsS~~~~~~~~~~~~~~~~~ 162 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPA-PDPRLVILGTVTANPKELGGKIPIPAP 162 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcccccCccccCCccCCCCc
Confidence 9999999998652223456789999999999999999999999999875322 2357999999765431
Q ss_pred ------------------------CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccc
Q psy616 383 ------------------------DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI 431 (1152)
Q Consensus 383 ------------------------~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~ 431 (1152)
......|+.+|.+...|++.+.++.. ...+++++++++|....++|..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~-~~~gi~v~~v~PG~v~~t~~~~ 234 (322)
T PRK07453 163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYH-ESTGITFSSLYPGCVADTPLFR 234 (322)
T ss_pred cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhc-ccCCeEEEEecCCcccCCcccc
Confidence 01235799999999998888776531 1235689999998876566643
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=185.34 Aligned_cols=222 Identities=17% Similarity=0.211 Sum_probs=167.0
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe--
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI-- 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i-- 314 (1152)
+++|||||+||||+++|++|+++|+ +|++++|++. +.+.+..+..+.++.++++|++|.++++++++++...++..
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~-~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT-HVISISRTEN-KELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV 79 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC-EEEEEeCCch-HHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence 5899999999999999999999998 5666677642 22222223346678899999999999999999988776532
Q ss_pred --eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 315 --DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 315 --dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
..+|||||.......+.+.+.++|.+.+++|+.|++.+.+.+.|+|++. ...+.||++||..+..+.+++..|+++
T Consensus 80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~s 157 (251)
T PRK06924 80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDW--KVDKRVINISSGAAKNPYFGWSAYCSS 157 (251)
T ss_pred CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhcc--CCCceEEEecchhhcCCCCCcHHHhHH
Confidence 2799999986534678899999999999999999999999999997542 223579999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc----cccc---hhHHh--hcCCCCCCHHHHHHHHHHHHh
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN----NEQT---DFYFK--SSKQKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~----~~~~---~~~~~--~~g~~~l~~~e~~~~l~~~l~ 463 (1152)
|++++.|++.++.+......++++.+|.+|.+. +.|.... .... ..... ..+ ...++++..+.+..++.
T Consensus 158 Kaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~ 235 (251)
T PRK06924 158 KAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMD-TNMQAQIRSSSKEDFTNLDRFITLKEEG-KLLSPEYVAKALRNLLE 235 (251)
T ss_pred HHHHHHHHHHHHHHhhhcCCCeEEEEecCCccc-cHhHHHHHhcCcccchHHHHHHHHhhcC-CcCCHHHHHHHHHHHHh
Confidence 999999999987653222346788999888765 3432110 0000 00011 112 35788999999988886
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 236 ~ 236 (251)
T PRK06924 236 T 236 (251)
T ss_pred c
Confidence 5
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=171.62 Aligned_cols=210 Identities=16% Similarity=0.177 Sum_probs=161.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcC-CcEEEEecCCcchH-HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc--C
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNS-IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI--G 312 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~G-a~~vil~~R~~~~~-~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~--G 312 (1152)
+.|+||||.+|||+.+++.|.+.- ..+++...|+.... +..+.......++++++.||++.+++..+++++.+-- .
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 569999999999999999999774 44555555544332 2222222246789999999999999999999998874 4
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCC--------CCCEEEEecCCccccCC-
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN--------KLDFVCYFSSSSAILGD- 383 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~--------~~~~iV~~SS~a~~~g~- 383 (1152)
.++.+|+|||+........+.+.+.|.+.+++|..|+..+.|+|+|++++.... ....||++||..+-.+.
T Consensus 84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~ 163 (249)
T KOG1611|consen 84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGF 163 (249)
T ss_pred CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCC
Confidence 799999999998755666777899999999999999999999999999875533 23479999998776654
Q ss_pred --CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHH
Q psy616 384 --FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQL 461 (1152)
Q Consensus 384 --~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~ 461 (1152)
.++.+|.++|++|..|++.+.-+.. ..++-+++|++ .|-.++|... -..+++||...-+...
T Consensus 164 ~~~~~~AYrmSKaAlN~f~ksls~dL~--~~~ilv~sihP-GwV~TDMgg~-------------~a~ltveeSts~l~~~ 227 (249)
T KOG1611|consen 164 RPGGLSAYRMSKAALNMFAKSLSVDLK--DDHILVVSIHP-GWVQTDMGGK-------------KAALTVEESTSKLLAS 227 (249)
T ss_pred CCcchhhhHhhHHHHHHHHHHhhhhhc--CCcEEEEEecC-CeEEcCCCCC-------------CcccchhhhHHHHHHH
Confidence 4678999999999999999987754 45566777765 5778888642 2247777776655554
Q ss_pred H
Q psy616 462 L 462 (1152)
Q Consensus 462 l 462 (1152)
+
T Consensus 228 i 228 (249)
T KOG1611|consen 228 I 228 (249)
T ss_pred H
Confidence 4
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=183.48 Aligned_cols=222 Identities=17% Similarity=0.199 Sum_probs=171.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+|+||..++++|+++|.. |+++.|++ ..+.....++..+.++.++.+|++|++++.++++++...+++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999999999886 67777764 334455666667888999999999999999999999988999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+|||+||... ...+.+.+.++|+..+..|+.+++++.+.+.|+|.+. ..++||++||..+..+..+...|+.+|
T Consensus 83 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~ii~~ss~~~~~~~~~~~~y~~sk 158 (246)
T PRK05653 83 LDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA---RYGRIVNISSVSGVTGNPGQTNYSAAK 158 (246)
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEECcHHhccCCCCCcHhHhHH
Confidence 999999999877 5677788999999999999999999999999987542 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhh-cCCCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKS-SKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~-~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.+++.+..+.. ..+++..+|.++.+.+... ....... ...... ......++++..+.+..++..
T Consensus 159 ~~~~~~~~~l~~~~~--~~~i~~~~i~pg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 228 (246)
T PRK05653 159 AGVIGFTKALALELA--SRGITVNAVAPGFIDTDMT-EGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASD 228 (246)
T ss_pred HHHHHHHHHHHHHHh--hcCeEEEEEEeCCcCCcch-hhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999988776432 2356888888886644322 1101100 000111 112235678888888777653
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.7e-18 Score=183.91 Aligned_cols=210 Identities=14% Similarity=0.179 Sum_probs=158.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+++++||||++|||.+++++|+++|+ +|++++|+.... ...++.++.+|++++ ++++.+.++++
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~--------~~~~~~~~~~D~~~~------~~~~~~~~~~i 68 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGA-QVYGVDKQDKPD--------LSGNFHFLQLDLSDD------LEPLFDWVPSV 68 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCC-EEEEEeCCcccc--------cCCcEEEEECChHHH------HHHHHHhhCCC
Confidence 468999999999999999999999998 455566654221 134688999999987 45555667899
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++. +.++||++||+++..+.+++..|+++|+
T Consensus 69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 145 (235)
T PRK06550 69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER---KSGIIINMCSIASFVAGGGGAAYTASKH 145 (235)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEcChhhccCCCCCcccHHHHH
Confidence 9999999986423567788999999999999999999999999997543 3468999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-cc-hhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~-~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
++++|++.++.+.. ..++++.+|.+|.+........... .. ....+...+ +..++++..+.+..++..
T Consensus 146 a~~~~~~~la~~~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~ 216 (235)
T PRK06550 146 ALAGFTKQLALDYA--KDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASG 216 (235)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcCh
Confidence 99999999887643 3467888999887754322111110 00 011111112 246789999988887754
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.3e-18 Score=185.97 Aligned_cols=184 Identities=18% Similarity=0.225 Sum_probs=151.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc--hHHHHHHHHhCC-CcEEEEEecCCC-HHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--NSIIYKKLKKFN-NKAIYIQVDVSD-KLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~--~~~~~~~l~~~g-~~v~~~~~Dvsd-~~~v~~~~~~~~~~ 310 (1152)
.++++|||||++|||+++|+.|+++|+.++++..+... .+...+.....+ ..+.+.++|+++ .++++.+++++.+.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999888866666666553 233333333222 368889999998 99999999999999
Q ss_pred cCCeeEEEEcccccCcC-cccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-Chh
Q psy616 311 IGPIDGVLHIAGISGLT-SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-SCD 388 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~-~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g-~~~ 388 (1152)
+|++|++|||||+.. . .++.+.+.++|++++++|+.|.+.+.+++.|+|++ . .||++||+++. +.++ .+.
T Consensus 84 ~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~---~Iv~isS~~~~-~~~~~~~~ 155 (251)
T COG1028 84 FGRIDILVNNAGIAG-PDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---Q---RIVNISSVAGL-GGPPGQAA 155 (251)
T ss_pred cCCCCEEEECCCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---C---eEEEECCchhc-CCCCCcch
Confidence 999999999999986 5 48899999999999999999999999988888762 1 79999999999 8887 499
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 429 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 429 (1152)
|+++|+++.+|++.++.+.. ..++++.+|.+| +-.+.|
T Consensus 156 Y~~sK~al~~~~~~l~~e~~--~~gi~v~~v~PG-~~~t~~ 193 (251)
T COG1028 156 YAASKAALIGLTKALALELA--PRGIRVNAVAPG-YIDTPM 193 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHh--hhCcEEEEEEec-cCCCcc
Confidence 99999999999999996543 345788899888 434444
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=185.32 Aligned_cols=177 Identities=14% Similarity=0.131 Sum_probs=144.7
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||+||||++++++|+++|+.++ ++.|+. ..++..+..+..+.++.++.+|++|.+++.+++. +++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVI-AGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCC
Confidence 46899999999999999999999997554 455543 3334444455566778999999999988877643 379
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ..++.+.+.++|++++.+|+.|++.+.+.+++.|.+. ..++||++||..+..+.++...|+++|+
T Consensus 75 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~Y~~sK~ 150 (257)
T PRK09291 75 DVLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR---GKGKVVFTSSMAGLITGPFTGAYCASKH 150 (257)
T ss_pred CEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCceEEEEcChhhccCCCCcchhHHHHH
Confidence 99999999887 6788899999999999999999999999999987543 2368999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
+++.|++.++.+.. ..++++.+|.+|.+.
T Consensus 151 a~~~~~~~l~~~~~--~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 151 ALEAIAEAMHAELK--PFGIQVATVNPGPYL 179 (257)
T ss_pred HHHHHHHHHHHHHH--hcCcEEEEEecCccc
Confidence 99999988776422 235588889887664
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.1e-18 Score=199.20 Aligned_cols=264 Identities=20% Similarity=0.212 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
.-|..+++.+||+|||+++++++ ++++|+...++.. ...+..++..+|+. .|.+.|+++|+
T Consensus 22 ~~La~~A~~~Al~dAgl~~~dID----~vv~g~~~~~~~~-------------~~~a~~va~~lGl~~~~~~~~v~~~Ca 84 (386)
T TIGR01930 22 EDLGAAVIKELLERNPLDPELID----DVIFGNVLQAGEQ-------------QNIARQAALLAGLPESVPAYTVNRQCA 84 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCCC-------------ChHHHHHHHHcCCCCCceeeeecchhh
Confidence 56789999999999999998887 7777754332110 12345688888996 48999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHH---------H------HH-HhcCCCCC---C-------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAY---------I------AM-TSAGMLSP---D------------- 843 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~---------~------~~-~~~g~ls~---~------------- 843 (1152)
|++.||+.|++.|++|.||.+||+|++.+.. +... . .+ ...|+..+ .
T Consensus 85 sg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y~~~y 164 (386)
T TIGR01930 85 SGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAENLAKKY 164 (386)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHHHHHHHc
Confidence 9999999999999999999999999875321 1000 0 00 00011000 0
Q ss_pred C-----------------Cc--c---------cC-------------C-------------------------CCCCCcc
Q psy616 844 G-----------------KC--Y---------VF-------------D-------------------------ERANGLV 857 (1152)
Q Consensus 844 g-----------------~~--~---------~F-------------d-------------------------~~a~G~v 857 (1152)
| .- + |. | ...|--.
T Consensus 165 G~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~~~d~~~ 244 (386)
T TIGR01930 165 GISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSSP 244 (386)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeeeCCccCC
Confidence 0 00 0 21 0 0012222
Q ss_pred cccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy616 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937 (1152)
Q Consensus 858 ~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~g 937 (1152)
++||++++||.+.+.|.+.|+++++.|+|++...+. ..+...+..++++++|++||++|+||||+|.|.+.|
T Consensus 245 ~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~-----~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~fa--- 316 (386)
T TIGR01930 245 LNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVD-----PEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAFA--- 316 (386)
T ss_pred CCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CccccccHHHHHHHHHHHcCCCHHHCCeeehcchhH---
Confidence 489999999999999999999999999999887431 123344567899999999999999999999998876
Q ss_pred CHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccc
Q psy616 938 DPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKS 1017 (1152)
Q Consensus 938 D~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~ 1017 (1152)
++.-...+.|+-. ..++.+.+-|...||+.+|+|+..++.++++|+.+
T Consensus 317 --~~~~~~~e~lG~~---~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~--------------------------- 364 (386)
T TIGR01930 317 --AQVLACIKELGLD---LEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR--------------------------- 364 (386)
T ss_pred --HHHHHHHHHhCCC---hhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 3333333455431 12356677788889999999999999999999973
Q ss_pred cccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1018 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1018 ~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
..|+++++..+.||.-..+|||
T Consensus 365 ---------~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 365 ---------GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred ---------CCCEEEEEEeccCCceEEEEeC
Confidence 1367888888999999999986
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-17 Score=181.15 Aligned_cols=217 Identities=18% Similarity=0.251 Sum_probs=163.8
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+||||++|+||..++++|+++|++ |+++.|+. ..+...+.++..+.++.++.+|++|+++++++++.+.+.++++|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAK-VIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999985 55555543 233455566677888999999999999999999999999999999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHH
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 396 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l 396 (1152)
|||+||... ...+.+.+.+++++.+++|+.+++++.+.+.+.|.+ ...++||++||.++..|.+++..|+++|+++
T Consensus 80 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~ 155 (239)
T TIGR01830 80 LVNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIK---QRSGRIINISSVVGLMGNAGQANYAASKAGV 155 (239)
T ss_pred EEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCeEEEEECCccccCCCCCCchhHHHHHHH
Confidence 999999876 566778899999999999999999999999988643 2356899999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC-CCCCCHHHHHHHHHHHHh
Q psy616 397 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 397 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~ 463 (1152)
+.+++.++.+.. ..+.++..+.+|... +.|........ ........ ....++++..+.+..++.
T Consensus 156 ~~~~~~l~~~~~--~~g~~~~~i~pg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 221 (239)
T TIGR01830 156 IGFTKSLAKELA--SRNITVNAVAPGFID-TDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLAS 221 (239)
T ss_pred HHHHHHHHHHHh--hcCeEEEEEEECCCC-ChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhC
Confidence 999888765432 234567777666543 33322111110 01111111 124567788777776663
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.2e-19 Score=172.90 Aligned_cols=218 Identities=16% Similarity=0.140 Sum_probs=163.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++++||+..|||+++++.|++.|+ .||.+.|.+ +.+....+.-...+..+..|+++.+.+.+++.. .++|
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~--a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~----v~pi 78 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNE--ANLLSLVKETPSLIIPIVGDLSAWEALFKLLVP----VFPI 78 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCH--HHHHHHHhhCCcceeeeEecccHHHHHHHhhcc----cCch
Confidence 588999999999999999999999998 555566654 223333333445588899999998877766543 5799
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
||++||||+.. ..++.+.|.++|++.|++|+.+.+++.+.+...+. .....+.||++||.++..+..+.+.||++|+
T Consensus 79 dgLVNNAgvA~-~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv--~R~~~GaIVNvSSqas~R~~~nHtvYcatKa 155 (245)
T KOG1207|consen 79 DGLVNNAGVAT-NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLV--DRQIKGAIVNVSSQASIRPLDNHTVYCATKA 155 (245)
T ss_pred hhhhccchhhh-cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhh--hccCCceEEEecchhcccccCCceEEeecHH
Confidence 99999999998 88999999999999999999999999998665543 2234566999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch---hHHhhcCCCC-CCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD---FYFKSSKQKV-LHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~---~~~~~~g~~~-l~~~e~~~~l~~~l~~~ 465 (1152)
+||.+++.+.-+. +...+++.++|+... -+.|..+...... .++.+..+.. -..+|...+..++|+..
T Consensus 156 ALDmlTk~lAlEL--Gp~kIRVNsVNPTVV-mT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ 227 (245)
T KOG1207|consen 156 ALDMLTKCLALEL--GPQKIRVNSVNPTVV-MTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDN 227 (245)
T ss_pred HHHHHHHHHHHhh--CcceeEeeccCCeEE-EecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecC
Confidence 9999999998763 256778889987654 3456555433221 2233332222 23466666666666543
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=6e-18 Score=190.62 Aligned_cols=219 Identities=16% Similarity=0.133 Sum_probs=167.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+++++|||+++|||+++|+.|+.+|+ +|++..|+. ..++..+.+... ..++.+++||++|..+|+++.+++.+.+
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 468999999999999999999999994 777778874 566677777652 4578899999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC---------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--------- 382 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g--------- 382 (1152)
+++|++|||||+.. ... ..+.|.++..|.+|..|.+.|++.++|.|++... .+||++||..+ ..
T Consensus 113 ~~ldvLInNAGV~~-~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~---~RIV~vsS~~~-~~~~~~~~l~~ 185 (314)
T KOG1208|consen 113 GPLDVLINNAGVMA-PPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP---SRIVNVSSILG-GGKIDLKDLSG 185 (314)
T ss_pred CCccEEEeCccccc-CCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCC---CCEEEEcCccc-cCccchhhccc
Confidence 99999999999976 222 7788999999999999999999999999875432 67999999886 11
Q ss_pred -----CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCC-CCHHHHHH
Q psy616 383 -----DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKV-LHENDGLK 456 (1152)
Q Consensus 383 -----~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~-l~~~e~~~ 456 (1152)
..+..+|+.+|.++..++..+.++.. . ++.+.++.+|.+...++.. ................ -++++|++
T Consensus 186 ~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~--~-~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~~~ks~~~ga~ 261 (314)
T KOG1208|consen 186 EKAKLYSSDAAYALSKLANVLLANELAKRLK--K-GVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWPLTKSPEQGAA 261 (314)
T ss_pred hhccCccchhHHHHhHHHHHHHHHHHHHHhh--c-CceEEEECCCcccccceec-chHHHHHHHHHHHHHhccCHHHHhh
Confidence 11223599999999999998887643 2 6788899888887776654 1111111111111111 25777777
Q ss_pred HHHHHHhcC
Q psy616 457 LFEQLLIQD 465 (1152)
Q Consensus 457 ~l~~~l~~~ 465 (1152)
.+-.+...+
T Consensus 262 t~~~~a~~p 270 (314)
T KOG1208|consen 262 TTCYAALSP 270 (314)
T ss_pred heehhccCc
Confidence 766655444
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-17 Score=180.90 Aligned_cols=212 Identities=16% Similarity=0.180 Sum_probs=161.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+++++||||+||||+.++++|+++|. +|++++|+... ... ..++.+|++|.++++++++++.+.+ ++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~--------~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 69 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID--------DFP--GELFACDLADIEQTAATLAQINEIH-PV 69 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc--------ccC--ceEEEeeCCCHHHHHHHHHHHHHhC-CC
Confidence 368899999999999999999999987 56666676432 111 2468999999999999999998876 68
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ..++.+.+.++|++++++|+.|++++.+.+.|.|++. ..++||++||.+ ..+.++...|+++|+
T Consensus 70 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~-~~~~~~~~~Y~~sK~ 144 (234)
T PRK07577 70 DAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR---EQGRIVNICSRA-IFGALDRTSYSAAKS 144 (234)
T ss_pred cEEEECCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEEcccc-ccCCCCchHHHHHHH
Confidence 99999999877 6677888999999999999999999999999998653 346799999985 567888999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcCCC-CCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQK-VLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~~-~l~~~e~~~~l~~~l~~~ 465 (1152)
+++.|++.++.+.. ..++++++|.+|.+....+..... ...........+. ...+++..+.+..++..+
T Consensus 145 a~~~~~~~~a~e~~--~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~ 217 (234)
T PRK07577 145 ALVGCTRTWALELA--EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDD 217 (234)
T ss_pred HHHHHHHHHHHHHH--hhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999998876543 346689999998876543321100 0001111112221 236888888888877543
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-17 Score=183.12 Aligned_cols=222 Identities=13% Similarity=0.090 Sum_probs=168.4
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||+|+||++++++|+++|+ +|+++.|+. ..+.+.+++...+.++.++.+|++|.+++.++++.+.+.++++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999998 566666653 3344555566566789999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... .....+.+.++++++++.|+.|++.+.+.+++.|++. ..+.||++||..+..+.++...|+++|+
T Consensus 80 d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~~~~~v~~ss~~~~~~~~~~~~y~~sk~ 155 (255)
T TIGR01963 80 DILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ---GWGRIINIASAHGLVASPFKSAYVAAKH 155 (255)
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCeEEEEEcchhhcCCCCCCchhHHHHH
Confidence 99999999876 5666778899999999999999999999999987543 3567999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-------cccch----hHH--hhcCCCCCCHHHHHHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-------NEQTD----FYF--KSSKQKVLHENDGLKLFEQL 461 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-------~~~~~----~~~--~~~g~~~l~~~e~~~~l~~~ 461 (1152)
+++.+++.+..+.. ..+++++.|..+...+..+.... ..... ..+ .......+.+++..+.+..+
T Consensus 156 a~~~~~~~~~~~~~--~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~ 233 (255)
T TIGR01963 156 GLIGLTKVLALEVA--AHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFL 233 (255)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHH
Confidence 99999988766532 22457777776644322110000 00000 000 00112357888998888888
Q ss_pred Hhc
Q psy616 462 LIQ 464 (1152)
Q Consensus 462 l~~ 464 (1152)
+..
T Consensus 234 ~~~ 236 (255)
T TIGR01963 234 ASD 236 (255)
T ss_pred cCc
Confidence 754
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-17 Score=180.65 Aligned_cols=212 Identities=14% Similarity=0.105 Sum_probs=155.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l-~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|+.|+++|++++++..++.. ..+++ ...+ +.++.+|++|.+++.++++ .+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~l~~~~~--~~~~~~D~~~~~~~~~~~~----~~~~ 75 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD---AAERLAQETG--ATAVQTDSADRDAVIDVVR----KSGA 75 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH---HHHHHHHHhC--CeEEecCCCCHHHHHHHHH----HhCC
Confidence 47899999999999999999999999865444343321 11222 2223 4578899999998877764 3689
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-cCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-~g~~g~~~Yaaa 392 (1152)
+|+||||||... .....+.+.++|++++++|+.|++.+.+.+.+.|++ .+.||++||..+. .+.++...|+++
T Consensus 76 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~~Y~~s 149 (237)
T PRK12742 76 LDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-----GGRIIIIGSVNGDRMPVAGMAAYAAS 149 (237)
T ss_pred CcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-----CCeEEEEeccccccCCCCCCcchHHh
Confidence 999999999876 566778899999999999999999999999988642 2579999998884 567889999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
|++++.+++.++.+.. ..++++.+|.+|... +.|................ -+..+|++..+.+..++..
T Consensus 150 Kaa~~~~~~~la~~~~--~~gi~v~~v~Pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~ 219 (237)
T PRK12742 150 KSALQGMARGLARDFG--PRGITINVVQPGPID-TDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGP 219 (237)
T ss_pred HHHHHHHHHHHHHHHh--hhCeEEEEEecCccc-CCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 9999999998877643 345688889888775 4443221111111111111 1346889999988877653
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=196.00 Aligned_cols=266 Identities=21% Similarity=0.270 Sum_probs=185.6
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Cccccc
Q psy616 715 MDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAIN 792 (1152)
Q Consensus 715 mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvd 792 (1152)
.++ .-|+.+++.+||+|||+++++++ +|++|...... .+ .+ .+..++..+||.. |.++|+
T Consensus 23 ~~~-~~L~~~a~~~al~dAgl~~~~ID----~vv~g~~~~~~----------~~--~~-~~~~~~~~~Gl~~~~p~~~v~ 84 (394)
T PLN02644 23 LSA-TELGSIAIQAALERAGVDPALVQ----EVFFGNVLSAN----------LG--QA-PARQAALGAGLPPSTICTTVN 84 (394)
T ss_pred CCH-HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCcCC----------cC--Cc-HHHHHHHhcCCCCCCceEEEe
Confidence 344 56789999999999999998888 78888543211 01 11 2334778888863 788999
Q ss_pred ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH---------------H---H-------------H------HH
Q psy616 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---------------A---Y-------------I------AM 834 (1152)
Q Consensus 793 taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~---------------~---~-------------~------~~ 834 (1152)
++|+|++.|+++|+++|++|+||++||+|++.+.. |. . . + .+
T Consensus 85 ~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 164 (394)
T PLN02644 85 KVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCA 164 (394)
T ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHHHH
Confidence 99999999999999999999999999999774321 10 0 0 0 00
Q ss_pred HhcCCCC-----------------CC-CCcc----c-------------CC---------------------------CC
Q psy616 835 TSAGMLS-----------------PD-GKCY----V-------------FD---------------------------ER 852 (1152)
Q Consensus 835 ~~~g~ls-----------------~~-g~~~----~-------------Fd---------------------------~~ 852 (1152)
.+.|+-. ++ +..+ | +| ..
T Consensus 165 ~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g~vt~ 244 (394)
T PLN02644 165 DQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGSVTA 244 (394)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCCcEec
Confidence 0111100 11 1211 0 10 00
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
.|--.++||++++||++.+.|.+.++++++.|+|++.+++......+.| ..+++++|++||++|+||+|+|.|
T Consensus 245 ~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~-----~~a~~~al~~Agi~~~Did~~Ei~-- 317 (394)
T PLN02644 245 GNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAP-----ALAIPKALKHAGLEASQVDYYEIN-- 317 (394)
T ss_pred cccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhH-----HHHHHHHHHHcCCCHHHCCEEEeC--
Confidence 1234458999999999999999999999999999998876432222222 469999999999999999999987
Q ss_pred CCCCCCHHHHHHH--HHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCC
Q psy616 933 GTKLGDPVEINAL--HDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 1010 (1152)
Q Consensus 933 gT~~gD~~E~~al--~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~ 1010 (1152)
|+.+...+ .+.|+-.. .++....-+..+||+.+|+|+..++..+.+|+.+
T Consensus 318 -----d~f~~~~l~~~e~lg~~~---~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~-------------------- 369 (394)
T PLN02644 318 -----EAFSVVALANQKLLGLDP---EKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK-------------------- 369 (394)
T ss_pred -----cHHHHHHHHHHHHhCCCc---cccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc--------------------
Confidence 55555443 34454211 2334444445679999999999999999999872
Q ss_pred CeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1011 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..|++.++.++-||....+|||.
T Consensus 370 ----------------~~~~g~~~~~~~gg~g~a~~~e~ 392 (394)
T PLN02644 370 ----------------NGKYGVAGICNGGGGASAIVVEL 392 (394)
T ss_pred ----------------CCCeEEEEEeccCCceeEEEEEe
Confidence 12456666677789999999985
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-17 Score=181.45 Aligned_cols=220 Identities=15% Similarity=0.120 Sum_probs=166.7
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-CCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-GPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-G~id 315 (1152)
+++|||||+||||.+++++|+++|+ +|+++.|+... .+.++..+ +.++.||++|.+++.++++.+.... +++|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~---~~~~~~~~--~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDD---VARMNSLG--FTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHH---hHHHHhCC--CeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 6899999999999999999999987 56666776422 22333333 6788999999999999999887643 6899
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
++|||||... ..++.+.+.+++++.+++|+.|++++.+.+++.|++. +.+.||++||.++..+.++...|+++|++
T Consensus 77 ~ii~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~ 152 (256)
T PRK08017 77 GLFNNAGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH---GEGRIVMTSSVMGLISTPGRGAYAASKYA 152 (256)
T ss_pred EEEECCCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc---CCCEEEEEcCcccccCCCCccHHHHHHHH
Confidence 9999999876 5677888999999999999999999999999987643 34579999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC---CCCCCHHHHHHHHHHHHhcCceee
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK---QKVLHENDGLKLFEQLLIQDKIQY 469 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g---~~~l~~~e~~~~l~~~l~~~~~~~ 469 (1152)
++.|++.++.+.. ..+++++.|.+|.+... |........ .......+ ...+.+++..+.+..++..+....
T Consensus 153 ~~~~~~~l~~~~~--~~~i~v~~v~pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~ 227 (256)
T PRK08017 153 LEAWSDALRMELR--HSGIKVSLIEPGPIRTR-FTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPKL 227 (256)
T ss_pred HHHHHHHHHHHHh--hcCCEEEEEeCCCcccc-hhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCCc
Confidence 9999887655422 33568889998877532 221100000 00000001 124889999999999998776543
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-17 Score=180.64 Aligned_cols=215 Identities=14% Similarity=0.139 Sum_probs=167.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+|+||+.++++|+++|++ |+++.|+. ...+..+++...+ +.++.+|++|.+++.++++++.+.+|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGAR-VALIGRGAAPLSQTLPGVPADA--LRIGGIDLVDPQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCe-EEEEeCChHhHHHHHHHHhhcC--ceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999885 66666653 3334444554443 566789999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+|||+||... ...+.+.+.+++++.+.+|+.+++.+.+++.+.|++ .+.++||++||+.+..+.+++..|+++|
T Consensus 83 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~y~~sk 158 (239)
T PRK12828 83 LDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTA---SGGGRIVNIGAGAALKAGPGMGAYAAAK 158 (239)
T ss_pred cCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHh---cCCCEEEEECchHhccCCCCcchhHHHH
Confidence 999999999876 566778899999999999999999999999998754 3467899999999998889999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.+++.++.... ..++++..|.+|...+..+.... . .......+++++..+++..++...
T Consensus 159 ~a~~~~~~~~a~~~~--~~~i~~~~i~pg~v~~~~~~~~~--~-----~~~~~~~~~~~dva~~~~~~l~~~ 221 (239)
T PRK12828 159 AGVARLTEALAAELL--DRGITVNAVLPSIIDTPPNRADM--P-----DADFSRWVTPEQIAAVIAFLLSDE 221 (239)
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEecCcccCcchhhcC--C-----chhhhcCCCHHHHHHHHHHHhCcc
Confidence 999999988776532 23568888888766543211100 0 000112467899999888887643
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=208.96 Aligned_cols=189 Identities=15% Similarity=0.126 Sum_probs=159.2
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.+++++|||||+||||+++|++|+++|+ +|+++.|+.. .+...+.+... .++.++.||++|++++.++++++.+.+|
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3679999999999999999999999998 5666666643 23344444433 4788999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||+.. ..++.+.+.++|+.++++|+.|++++.+.+.+.|++.. ..++||++||..+..+.++++.|+++
T Consensus 498 ~iDvvI~~AG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~~g~iV~vsS~~~~~~~~~~~~Y~as 574 (681)
T PRK08324 498 GVDIVVSNAGIAI-SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG--LGGSIVFIASKNAVNPGPNFGAYGAA 574 (681)
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCcEEEEECCccccCCCCCcHHHHHH
Confidence 9999999999987 78888999999999999999999999999999976422 13689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCccc-Cccc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN-NSKF 429 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~-~~Gm 429 (1152)
|++++.|++.++.+.. ..++++.+|+++.+- +++|
T Consensus 575 Kaa~~~l~~~la~e~~--~~gIrvn~v~Pg~v~~~t~~ 610 (681)
T PRK08324 575 KAAELHLVRQLALELG--PDGIRVNGVNPDAVVRGSGI 610 (681)
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEeCceeecCCcc
Confidence 9999999999887643 345788889887763 4454
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=193.92 Aligned_cols=262 Identities=15% Similarity=0.148 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccchh
Q psy616 720 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACSS 797 (1152)
Q Consensus 720 rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCsS 797 (1152)
-|..++..++|+|+|+++++++ .||+|...... .+ ..++..++...||.. |+++|+++|+|
T Consensus 29 ~L~~~a~~~al~~agi~~~~Id----~vv~G~~~~~~----------~g---~~~~r~~~~~~Gl~~~~p~~~V~~~CaS 91 (392)
T PRK06633 29 MLAAHLIKDILQNSKIDPALVN----EVILGQVITGG----------SG---QNPARQTLIHAGIPKEVPGYTINKVCGS 91 (392)
T ss_pred HHHHHHHHHHHHHcCCCHHHcC----EEEEEecCccc----------cc---cHHHHHHHHHCCCCCCccchhhcchhHH
Confidence 4668899999999999998887 68999654321 01 123444677889974 99999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCc-CHHHHH-----------H-----HHhc-CCCC------------------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMI-SPEAYI-----------A-----MTSA-GMLS------------------ 841 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~-~~~~~~-----------~-----~~~~-g~ls------------------ 841 (1152)
|+.|++.|++.|++|++|++||||++.+. .|.... . +... +.+.
T Consensus 92 G~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~git 171 (392)
T PRK06633 92 GLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNIS 171 (392)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999654 221000 0 0000 0000
Q ss_pred ------------------CC-CCcc----cCC-----------------------C--------CCCC-------ccccc
Q psy616 842 ------------------PD-GKCY----VFD-----------------------E--------RANG-------LVPSE 860 (1152)
Q Consensus 842 ------------------~~-g~~~----~Fd-----------------------~--------~a~G-------~v~gE 860 (1152)
|. +..+ |.+ . +.+| -.++|
T Consensus 172 re~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~~~~g~lt~~n~s~~sD 251 (392)
T PRK06633 172 RQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAFDKNGVVTAGNASSIND 251 (392)
T ss_pred HHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCccCCCCCEechhcCCccC
Confidence 00 1011 110 0 0123 34689
Q ss_pred ccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHH
Q psy616 861 AVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPV 940 (1152)
Q Consensus 861 G~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~ 940 (1152)
|++++||.+.+.|.+.|.++++.|+|++...+... +.+.+...+++++|++||++|+||||+|.| |+.
T Consensus 252 GAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~-----~~~~~~~~a~~~Al~~AGl~p~DID~~ei~-------daf 319 (392)
T PRK06633 252 GAACLMVVSEEALKKHNLTPLARIVSYASAGVDPS-----IMGTAPVPASQKALSKAGWSVNDLEVIEVN-------EAF 319 (392)
T ss_pred ceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcc-----hhchHHHHHHHHHHHHcCCCHHHcCeeehh-------hHH
Confidence 99999999999999999999999999998754221 112455788999999999999999999987 554
Q ss_pred HHHHHH--HHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecccc
Q psy616 941 EINALH--DVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSN 1018 (1152)
Q Consensus 941 E~~al~--~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~ 1018 (1152)
.+..|. +.++- ...++.+.+-|..+||+.+|+|+..++.++++|+.+
T Consensus 320 a~~~l~~~~~l~~---~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~---------------------------- 368 (392)
T PRK06633 320 AAQSIYVNREMKW---DMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA---------------------------- 368 (392)
T ss_pred HHHHHHHHhhhCC---CccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc----------------------------
Confidence 444332 12221 123567888899999999999999999999999871
Q ss_pred ccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1019 KKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1019 ~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..|++.++..+-||.-..+|||.
T Consensus 369 --------~~~~g~~~~c~~gG~g~a~~~e~ 391 (392)
T PRK06633 369 --------KAKKGLVTLCIGGGMGMAMCVEA 391 (392)
T ss_pred --------CCCeEEEEEecccChhheEEEEe
Confidence 12566677777788888888874
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=190.43 Aligned_cols=217 Identities=12% Similarity=0.054 Sum_probs=159.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+. ..++..+++. .+.++.+|++|.++++++++++.+.+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~-Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~~~ 99 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAH-VIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSGRR 99 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999985 55666663 2233333342 3778999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-----------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG----------- 382 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g----------- 382 (1152)
+|+||||||+.. . ..+.+.++|+..+++|+.|++++.+.++|.|++. ..+.||++||..+..+
T Consensus 100 iD~li~nAg~~~-~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~---~~~~iV~vSS~~~~~~~~~~~~~~~~~ 173 (315)
T PRK06196 100 IDILINNAGVMA-C--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAG---AGARVVALSSAGHRRSPIRWDDPHFTR 173 (315)
T ss_pred CCEEEECCCCCC-C--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc---CCCeEEEECCHHhccCCCCccccCccC
Confidence 999999999864 2 2356778899999999999999999999998653 2357999999865432
Q ss_pred -CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch---hHHhhcC--C--CCCCHHHH
Q psy616 383 -DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD---FYFKSSK--Q--KVLHENDG 454 (1152)
Q Consensus 383 -~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~---~~~~~~g--~--~~l~~~e~ 454 (1152)
..+...|+++|+++..|++.++.+.. ..++++.+|.+|... +.|......... ......+ + ...+++++
T Consensus 174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (315)
T PRK06196 174 GYDKWLAYGQSKTANALFAVHLDKLGK--DQGVRAFSVHPGGIL-TPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQG 250 (315)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEeeCCccc-CCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHH
Confidence 23457899999999999998876532 345688899887664 333222111000 0011000 1 24578999
Q ss_pred HHHHHHHHhcC
Q psy616 455 LKLFEQLLIQD 465 (1152)
Q Consensus 455 ~~~l~~~l~~~ 465 (1152)
...+..++..+
T Consensus 251 a~~~~~l~~~~ 261 (315)
T PRK06196 251 AATQVWAATSP 261 (315)
T ss_pred HHHHHHHhcCC
Confidence 99988887654
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-17 Score=194.22 Aligned_cols=248 Identities=19% Similarity=0.229 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
..|..+++.+||+|||+++++++ +|++|....... ....+..++..+|+++ |+++|+++|+|
T Consensus 22 ~eLa~~A~~~AL~dAgi~~~dID----~vi~g~~~~~~~-------------~~~~a~~v~~~lGl~~~~~~~v~~~cas 84 (385)
T PRK12578 22 QELAWESIKEALNDAGVSQTDIE----LVVVGSTAYRGI-------------ELYPAPIVAEYSGLTGKVPLRVEAMCAT 84 (385)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc-------------cCChHHHHHHHhCCCCCCeeEEeccCHH
Confidence 56889999999999999998887 788886432110 0113566889999976 77999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHH---H--------HHH--hcCCC------------------------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAY---I--------AMT--SAGML------------------------ 840 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~---~--------~~~--~~g~l------------------------ 840 (1152)
++.||+.|++.|++|+||.+||+|++.+...... . .+. ..|+.
T Consensus 85 g~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a 164 (385)
T PRK12578 85 GLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMA 164 (385)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHH
Confidence 9999999999999999999999998864321000 0 000 01100
Q ss_pred ------------CCCCCc----------------ccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecC
Q psy616 841 ------------SPDGKC----------------YVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYD 892 (1152)
Q Consensus 841 ------------s~~g~~----------------~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~d 892 (1152)
.|.+.. .|+ ...|...++||++++||.+.+.|.+.|-+.++.|+|++..++
T Consensus 165 ~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~ 243 (385)
T PRK12578 165 LVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYAND 243 (385)
T ss_pred HHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecC
Confidence 021111 111 122444468999999999999998887556789999998877
Q ss_pred CCCCCCCCCC---HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccc-----------CCCCC
Q psy616 893 GKTNGITAPN---GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK-----------TYNQK 957 (1152)
Q Consensus 893 G~~~~~~~P~---~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~-----------~~~~~ 957 (1152)
....+ ..|+ ..+...++++||++||++|+|||++|.|.+.|. .|+.++... |+.. .....
T Consensus 244 ~~~~~-~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~----~~l~~le~lGl~~~G~~~~~~~~G~~~~~G 318 (385)
T PRK12578 244 YAYVA-RRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTI----AEIMGYEDLGFTEKGKGGKFIEEGQSEKGG 318 (385)
T ss_pred ccccc-ccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHcCCCCCCchHHHHHCCCccCCC
Confidence 64321 1121 235568999999999999999999999999984 777777654 2221 01112
Q ss_pred ceee---eccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 958 FCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 958 ~~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
.++| |..++. ||+.+|+|+..++.++.+|+..
T Consensus 319 ~~pvN~~GG~la~-GhP~gatG~~~v~e~~~qLrg~ 353 (385)
T PRK12578 319 KVGVNLFGGLKAK-GHPLGATGLSMIYEITKQLRDE 353 (385)
T ss_pred CeeeCCCCCcccC-CCCccHHHHHHHHHHHHHHhCC
Confidence 2344 666766 9999999999999999999974
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.3e-17 Score=181.38 Aligned_cols=219 Identities=13% Similarity=0.125 Sum_probs=164.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||+||||++++++|+++|+. |++++|+.. .+...+.+ .+.++.++.+|++|.+++.++++++.++++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~-v~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDR-VLALDIDAAALAAFADAL--GDARFVPVACDLTDAASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999875 566666642 33344444 24568899999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... ...+.+.+.++|...+.+|+.|++++.+++.+.|++. ..+.||++||..+.. ..+...|+++|+
T Consensus 79 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~~sS~~~~~-~~~~~~y~~sK~ 153 (257)
T PRK07074 79 DVLVANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR---SRGAVVNIGSVNGMA-ALGHPAYSAAKA 153 (257)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCeEEEEEcchhhcC-CCCCcccHHHHH
Confidence 99999999876 5677788999999999999999999999999987542 346799999987653 346789999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchh---HHhhc-CCCCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF---YFKSS-KQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~---~~~~~-g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.+++.++.+.. ..++++..+..|................. ..+.. ....+.+++..+++..++..
T Consensus 154 a~~~~~~~~a~~~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~ 225 (257)
T PRK07074 154 GLIHYTKLLAVEYG--RFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASP 225 (257)
T ss_pred HHHHHHHHHHHHHh--HhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 99999999886643 23457778887755433221111001010 01111 12357889999999888753
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.3e-17 Score=184.13 Aligned_cols=185 Identities=18% Similarity=0.174 Sum_probs=151.6
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
-+++++|||||+|+||+.++++|+++|+. |+++.|+.. .++..+.+.. .++.++.+|++|++++.++++++.+.++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGAR-VHVCDVSEAALAATAARLPG--AKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhc--CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 36799999999999999999999999985 666666532 2333333322 2678899999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+|||+||.......+...+.++|.+++++|+.+++++.+.+.+.|++. ...++|+++||.++..|.+++..|+++
T Consensus 86 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~vv~~ss~~~~~~~~~~~~y~~~ 163 (264)
T PRK12829 86 GLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKAS--GHGGVIIALSSVAGRLGYPGRTPYAAS 163 (264)
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCeEEEEecccccccCCCCCchhHHH
Confidence 999999999987325667788999999999999999999999999887542 223689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
|++++.+++.++.+.. ..++++++|.+|...
T Consensus 164 K~a~~~~~~~l~~~~~--~~~i~~~~l~pg~v~ 194 (264)
T PRK12829 164 KWAVVGLVKSLAIELG--PLGIRVNAILPGIVR 194 (264)
T ss_pred HHHHHHHHHHHHHHHh--hcCeEEEEEecCCcC
Confidence 9999999988876532 235688888888664
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-17 Score=194.07 Aligned_cols=265 Identities=19% Similarity=0.194 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
.-|..+++.+||+|||+++++++ .|++|+....+.. ....+..++...|+. -|+++|+++|+
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID----~vi~g~~~~~~~~------------~~~~a~~~~~~~Gl~~~~p~~~V~~aCa 91 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVG----HVVFGHVIPTEPR------------DMYLSRVAAINAGVPQETPAFNVNRLCG 91 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEeeeccccCC------------CccHHHHHHHHcCCCCCCceEEecccch
Confidence 45778999999999999998887 7888865432110 011233345666884 59999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH---------------HHHH----HHh------cCC-----------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---------------AYIA----MTS------AGM----------- 839 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~---------------~~~~----~~~------~g~----------- 839 (1152)
|++.|++.|++.|++|++|.+||+|++.+.. |. .... +.. +++
T Consensus 92 Sg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygi 171 (394)
T PRK09051 92 SGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVAAKYGI 171 (394)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999986432 11 0000 000 000
Q ss_pred ------------------------------------------CCCCCCcc------------cCCCCCCCcc-------c
Q psy616 840 ------------------------------------------LSPDGKCY------------VFDERANGLV-------P 858 (1152)
Q Consensus 840 ------------------------------------------ls~~g~~~------------~Fd~~a~G~v-------~ 858 (1152)
+.|+...| |+....+|.+ +
T Consensus 172 tre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~~~~~g~lt~~~~s~~ 251 (394)
T PRK09051 172 SREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAGNASGI 251 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcccCCCccEeCCcCCCC
Confidence 01221111 2221111433 3
Q ss_pred ccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy616 859 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 938 (1152)
Q Consensus 859 gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD 938 (1152)
+||++++||.+.+.|.+.|+++++.|+|++...+.. .+...+...+++++|++||++|+||||+|.|.. +
T Consensus 252 ~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~agi~~~did~~ei~d~-----f 321 (394)
T PRK09051 252 NDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDP-----EYMGIGPVPATQKALERAGLTVADLDVIEANEA-----F 321 (394)
T ss_pred CCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCC-----CcccccHHHHHHHHHHHcCCCHHHcCEEEecCc-----c
Confidence 799999999999999999999999999998875322 122345578999999999999999999999975 5
Q ss_pred HHHHHHHHHHhcccCCCCCce-eeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccc
Q psy616 939 PVEINALHDVFKNKTYNQKFC-AITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKS 1017 (1152)
Q Consensus 939 ~~E~~al~~~f~~~~~~~~~~-~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~ 1017 (1152)
.++..+..+.|+-.. .++ +-|+.+ .+||+.+|+|+..++.++.+|+.+
T Consensus 322 ~~~~~~~~e~lg~~~---~~vN~~GG~~-a~Ghp~gAsG~~~~~~~~~~L~~~--------------------------- 370 (394)
T PRK09051 322 AAQACAVTRELGLDP---AKVNPNGSGI-SLGHPVGATGAIITVKALYELQRI--------------------------- 370 (394)
T ss_pred HHHHHHHHHHhCCCc---cccCCCccHH-HhcchHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 577777777786432 122 235545 469999999999999999999861
Q ss_pred cccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1018 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1018 ~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++.++...-||.-..+|||.
T Consensus 371 ---------~~~~g~~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 371 ---------GGRYALVTMCIGGGQGIAAIFER 393 (394)
T ss_pred ---------CCCEEEEEEccccChhhEEEEEe
Confidence 12567777777888888999874
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-17 Score=191.61 Aligned_cols=281 Identities=16% Similarity=0.201 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCcccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs~tvdtaCsS 797 (1152)
..|+.+++.+||+|||+++++++ +|++|+...++.... .. .+..+...++++ .|.++|+++|+|
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId----~vi~g~~~~~~~~~~-----~~------~~~~~~~~~gl~~~p~~~v~~~CaS 87 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVD----GIFLGHFNAGFSPQD-----FP------ASLVLQADPALRFKPATRVENACAT 87 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCccccc-----cc------hhHHHHHhcCCCCCceeeeccccHH
Confidence 57899999999999999998887 888886543321110 00 111223344664 499999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHHHH--HHh-----------cCC------C----------C------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYIA--MTS-----------AGM------L----------S------ 841 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~~~--~~~-----------~g~------l----------s------ 841 (1152)
++.||+.|++.|++|++|.+||+|++.+.. |..... ... .++ . +
T Consensus 88 g~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~ 167 (389)
T PRK07516 88 GSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAM 167 (389)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 999999999999999999999999987432 110000 000 011 0 0
Q ss_pred ------------CCCCc-ccCCC------------------CCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEe
Q psy616 842 ------------PDGKC-YVFDE------------------RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN 890 (1152)
Q Consensus 842 ------------~~g~~-~~Fd~------------------~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~ 890 (1152)
|.-.. ++++. ..|.-.++||++++||.+.+.|.+.+. ++.|+|++..
T Consensus 168 vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~~~--~v~i~g~~~~ 245 (389)
T PRK07516 168 IAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARALQR--AVRFRARAHV 245 (389)
T ss_pred HHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhcCC--CEEEEEEEec
Confidence 11000 11111 134445689999999999999987753 6789999988
Q ss_pred cCCCCCCCCCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhccc-----------CCCCCc
Q psy616 891 YDGKTNGITAP-NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNK-----------TYNQKF 958 (1152)
Q Consensus 891 ~dG~~~~~~~P-~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~-----------~~~~~~ 958 (1152)
++.....-..| ...+...+++++|++||++|+|||++|.|.+.|.. ..+.+++|. |+.. ......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~-~~~~~e~lg--~~~~G~~~~~~~~g~~~~~g~ 322 (389)
T PRK07516 246 NDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA-ELIEYEAMG--LAPPGQGARAIREGWTAKDGK 322 (389)
T ss_pred cCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH-HHHHHHHcC--CCCCCchHHHHHCCCccCCCC
Confidence 87643322222 34667789999999999999999999999999984 333344432 2211 111122
Q ss_pred eee---eccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcC
Q psy616 959 CAI---TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSA 1035 (1152)
Q Consensus 959 ~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~s 1035 (1152)
++| |..|+ .||+.+|+|+..++.++++|+...=..++ ...|++++++
T Consensus 323 ~pvN~sGG~la-~Ghp~gasG~~~~~e~~~QL~g~ag~rQv-----------------------------~~a~~~l~~~ 372 (389)
T PRK07516 323 LPVNPSGGLKA-KGHPIGATGVSMHVLAAMQLTGEAGGMQI-----------------------------PGAKLAGVFN 372 (389)
T ss_pred eeecCCCCccc-CCCCccHHHHHHHHHHHHHhcCCccCCcC-----------------------------Cchheeeeec
Confidence 344 67886 69999999999999999999984211110 1347788888
Q ss_pred cC-CCcceEEEEEcc
Q psy616 1036 FG-MSGTNAHIVLQE 1049 (1152)
Q Consensus 1036 fG-~gG~nah~il~~ 1049 (1152)
.| .+.+++.+||+.
T Consensus 373 ~gg~~~~~~~~vl~~ 387 (389)
T PRK07516 373 MGGAAVANYVSILER 387 (389)
T ss_pred cCcccceEEEEEEEe
Confidence 87 444566666653
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.1e-17 Score=177.40 Aligned_cols=207 Identities=13% Similarity=0.145 Sum_probs=164.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+|+||.++|++|+++|..+|+++.|+..... + .+.++.++.+|++|.++++++++. ++++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~---~---~~~~~~~~~~D~~~~~~~~~~~~~----~~~i 74 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT---D---LGPRVVPLQLDVTDPASVAAAAEA----ASDV 74 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh---h---cCCceEEEEecCCCHHHHHHHHHh----cCCC
Confidence 46899999999999999999999999866777777643211 1 456789999999999998887764 5789
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+|||+||.......+.+.+.++|...+++|+.+++.+.+++.|.|++. ..+.||++||..+..+.++...|+++|+
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~~v~~sS~~~~~~~~~~~~y~~sK~ 151 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN---GGGAIVNVLSVLSWVNFPNLGTYSASKA 151 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCEEEEEcChhhccCCCCchHhHHHHH
Confidence 9999999983325678889999999999999999999999999987543 3567999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCcee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQ 468 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~ 468 (1152)
+++.|++.++.+.. ..+.++.++.++.... .|... .....+++++..+.+...+..+...
T Consensus 152 a~~~~~~~l~~~~~--~~~i~~~~v~pg~v~t-~~~~~-----------~~~~~~~~~~~a~~~~~~~~~~~~~ 211 (238)
T PRK08264 152 AAWSLTQALRAELA--PQGTRVLGVHPGPIDT-DMAAG-----------LDAPKASPADVARQILDALEAGDEE 211 (238)
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEeCCcccc-ccccc-----------CCcCCCCHHHHHHHHHHHHhCCCCe
Confidence 99999998876532 2356888888877643 23111 1112688899999998888766543
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-17 Score=191.89 Aligned_cols=266 Identities=19% Similarity=0.192 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCccccccc
Q psy616 717 PRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTA 794 (1152)
Q Consensus 717 pq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdta 794 (1152)
+...|+.+++.+||+|+|+++++++ .|++|+...++.. ...++..++..+|+. .|+++|+++
T Consensus 26 ~~~dL~~~A~~~aL~~agi~~~~ID----~vi~G~~~~~~~~------------~~~~a~~i~~~lGl~~~~p~~~V~~a 89 (392)
T PRK07108 26 HGATLGGHVVQHAVERAKLDPAEVE----DVIMGCANPEGAT------------GANIARQIALRAGLPVTVPGMTVNRF 89 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----cEEEEEeeccccc------------ccHHHHHHHHHcCCCCCCceeeecch
Confidence 3478889999999999999998887 6888876543210 123677888988985 799999999
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH-----------H-------H--HHH-----HhcCCCC-------
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE-----------A-------Y--IAM-----TSAGMLS------- 841 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~-----------~-------~--~~~-----~~~g~ls------- 841 (1152)
|+|++.||+.|++.|++|++|++||||++.+.. |. . + +.. ...-.++
T Consensus 90 CaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~i~r~~~d~~ 169 (392)
T PRK07108 90 CSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKERQDEY 169 (392)
T ss_pred hhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHHHHhCCCHHHHHHH
Confidence 999999999999999999999999999996532 10 0 0 000 0000111
Q ss_pred ------------CCCC--------------ccc-----------CCCC-----------------C--CCc-------cc
Q psy616 842 ------------PDGK--------------CYV-----------FDER-----------------A--NGL-------VP 858 (1152)
Q Consensus 842 ------------~~g~--------------~~~-----------Fd~~-----------------a--~G~-------v~ 858 (1152)
.+|+ -.| ++++ . +|. .+
T Consensus 170 a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~~~g~lt~~n~~~~ 249 (392)
T PRK07108 170 GVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALPGGVITAGNASQF 249 (392)
T ss_pred HHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCCCCCCCcCCcCCCC
Confidence 1111 001 1111 0 232 35
Q ss_pred ccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy616 859 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 938 (1152)
Q Consensus 859 gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD 938 (1152)
+||++++||.+.+.|.+.|.++++.|+|++...+. ..+...+...+++++|++||++|+||||+|.|
T Consensus 250 ~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~Did~~ei~-------- 316 (392)
T PRK07108 250 SDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCE-----PDEMGIGPVFAVPKLLKQAGLKVDDIDLWELN-------- 316 (392)
T ss_pred CCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CcccchhHHHHHHHHHHHcCCCHHHcCchHhh--------
Confidence 89999999999999999999999999999887542 12333456789999999999999999999977
Q ss_pred HHHHHHHHHHhccc--CCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecc
Q psy616 939 PVEINALHDVFKNK--TYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINK 1016 (1152)
Q Consensus 939 ~~E~~al~~~f~~~--~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~ 1016 (1152)
|.-++..++... .-...++.+.+-+..+||+.+|+|+.=++..+-.|+.+
T Consensus 317 --eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~-------------------------- 368 (392)
T PRK07108 317 --EAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRR-------------------------- 368 (392)
T ss_pred --hHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhh--------------------------
Confidence 444444443210 00112456667777889999999999999988888761
Q ss_pred ccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1017 SNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1017 ~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++.++..+-||.-+.+|||.
T Consensus 369 ----------~~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 369 ----------GAKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred ----------CCCEEEEEEccccChhhEEEEEe
Confidence 12567788888889999999984
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-16 Score=175.10 Aligned_cols=221 Identities=14% Similarity=0.073 Sum_probs=163.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+|+||+.++++|+++|+.++++.++.. ..+.....+... +..+.++.+|++|.+++.++++.+.+.++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4589999999999999999999999985555543332 233344445433 34688899999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||... ..++.+.+.++++.++++|+.|++++.+++.|.|.+. .+.+++++|..+..+.++...|+++
T Consensus 85 ~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Y~~s 159 (249)
T PRK09135 85 RLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ----RGAIVNITDIHAERPLKGYPVYCAA 159 (249)
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC----CeEEEEEeChhhcCCCCCchhHHHH
Confidence 9999999999876 5667778889999999999999999999999987542 3568888888887778888999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
|++++.+++.++.+.. .+++++.+.++.....++....... .........+ ..-++++..+++..++.
T Consensus 160 K~~~~~~~~~l~~~~~---~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~ 229 (249)
T PRK09135 160 KAALEMLTRSLALELA---PEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLA 229 (249)
T ss_pred HHHHHHHHHHHHHHHC---CCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcC
Confidence 9999999998887532 2357788887766543321110111 1111111111 12367888888865554
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=175.25 Aligned_cols=208 Identities=11% Similarity=0.132 Sum_probs=154.8
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++++||||+||||+++|+.|+++|. ..+++..|+...+ ..+.++.+++||++|.++++++ .++++++|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~----~~~~~~id 69 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------FQHDNVQWHALDVTDEAEIKQL----SEQFTQLD 69 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------cccCceEEEEecCCCHHHHHHH----HHhcCCCC
Confidence 3689999999999999999999963 3455555544321 1245788999999999988774 35578999
Q ss_pred EEEEcccccCc-----CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC---CCCCh
Q psy616 316 GVLHIAGISGL-----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG---DFGSC 387 (1152)
Q Consensus 316 gvIh~AG~~~~-----~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g---~~g~~ 387 (1152)
.||||||+... ...+.+.+.+.|++.+.+|+.+++.+.+.+.|.|++. ..+.++++||..+... .++..
T Consensus 70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~---~~~~i~~iss~~~~~~~~~~~~~~ 146 (235)
T PRK09009 70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS---ESAKFAVISAKVGSISDNRLGGWY 146 (235)
T ss_pred EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc---CCceEEEEeecccccccCCCCCcc
Confidence 99999998741 2356788899999999999999999999999987532 3357999998766432 35678
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
.|+++|+++++|++.++.+......++++.+|.+|... +.|...... ....-...++++..+.+..++..+
T Consensus 147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~-t~~~~~~~~------~~~~~~~~~~~~~a~~~~~l~~~~ 217 (235)
T PRK09009 147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTD-TALSKPFQQ------NVPKGKLFTPEYVAQCLLGIIANA 217 (235)
T ss_pred hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEccccee-cCCCcchhh------ccccCCCCCHHHHHHHHHHHHHcC
Confidence 99999999999999998774322246788888887654 555321110 001112478999999999988765
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.4e-17 Score=176.77 Aligned_cols=195 Identities=11% Similarity=0.018 Sum_probs=144.3
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
.++||||+||||+++++.|+++|+ +|++..|+. ..++..+++ .+.++++|++|+++++++++++.+ ++|.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~ 72 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDT 72 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcE
Confidence 489999999999999999999988 455556653 222222222 256788999999999999887753 6999
Q ss_pred EEEcccccCc--C---cccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 317 VLHIAGISGL--T---SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 317 vIh~AG~~~~--~---~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
+|||||.... . ..+.+ +.++|++++++|+.|++++.+++.|.|++ .+.||++||.+ .++...|++
T Consensus 73 lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~g~Iv~isS~~----~~~~~~Y~a 142 (223)
T PRK05884 73 IVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS-----GGSIISVVPEN----PPAGSAEAA 142 (223)
T ss_pred EEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCeEEEEecCC----CCCccccHH
Confidence 9999985320 1 12334 57899999999999999999999999742 26799999976 356688999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+|+++.+|++.++.+.. ..++++.+|.+|.... .|... ... .....++|..+.+..++..
T Consensus 143 sKaal~~~~~~la~e~~--~~gI~v~~v~PG~v~t-~~~~~--------~~~--~p~~~~~~ia~~~~~l~s~ 202 (223)
T PRK05884 143 IKAALSNWTAGQAAVFG--TRGITINAVACGRSVQ-PGYDG--------LSR--TPPPVAAEIARLALFLTTP 202 (223)
T ss_pred HHHHHHHHHHHHHHHhh--hcCeEEEEEecCccCc-hhhhh--------ccC--CCCCCHHHHHHHHHHHcCc
Confidence 99999999999988754 4467888998876642 22110 001 1123788998888887653
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-17 Score=190.37 Aligned_cols=264 Identities=16% Similarity=0.172 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHH-hcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccc
Q psy616 719 QRHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTAC 795 (1152)
Q Consensus 719 ~rl~L~~a~~Ale-dAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaC 795 (1152)
.-|+.++..++|+ |||+++++++ .|++|..... +......+..++...|+. =|+++|+++|
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id----~v~~G~~~~~------------~~~~~~~ar~~~~~~Gl~~~~p~~~V~~~C 89 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAID----DVIYGCANQA------------GEDNRNVARMAALLAGLPVSVPGTTVNRLC 89 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEecccc------------ccccccHHHHHHHHcCCCCCCceEEeechh
Confidence 3567889999999 7999998887 6899864321 000112444588899996 4999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH-------HHH--------------------H-HH-----------
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE-------AYI--------------------A-MT----------- 835 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~-------~~~--------------------~-~~----------- 835 (1152)
+||+.|++.|++.|++|++|++||||++.+.. |. .+. . +.
T Consensus 90 aSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M~~~ae~~ 169 (400)
T TIGR02430 90 GSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENV 169 (400)
T ss_pred hhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccCcHHHHHHHH
Confidence 99999999999999999999999999997542 21 000 0 00
Q ss_pred --hc-------------------------------------------CCCCCCCCcc-------------cCCC-----C
Q psy616 836 --SA-------------------------------------------GMLSPDGKCY-------------VFDE-----R 852 (1152)
Q Consensus 836 --~~-------------------------------------------g~ls~~g~~~-------------~Fd~-----~ 852 (1152)
+. +.+.||...| .|+. .
T Consensus 170 a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~~~~~v~~p~g~lt~ 249 (400)
T TIGR02430 170 AEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVVRPDGTVTA 249 (400)
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHhcCCCcccCCCCEec
Confidence 00 0111121111 1211 1
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
.|--.++||++++||.+.+.|.+.|.++++.|+|++...... .+...+...+++++|++||++|+||||+|.|
T Consensus 250 ~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~DID~~ei~-- 322 (400)
T TIGR02430 250 GNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEP-----RIMGIGPVPATQKLLARAGLSIDQFDVIELN-- 322 (400)
T ss_pred cccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCC-----ccccchHHHHHHHHHHHhCCCHHHCCCcccC--
Confidence 222235899999999999999999999999999998775322 1233466789999999999999999999955
Q ss_pred CCCCCCHHHHHH--HHHHhcccCCCCCceeeeccCCC--CCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccC
Q psy616 933 GTKLGDPVEINA--LHDVFKNKTYNQKFCAITSNKSN--IGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008 (1152)
Q Consensus 933 gT~~gD~~E~~a--l~~~f~~~~~~~~~~~igsvKsn--iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~ 1008 (1152)
|+.+... ..+.|+-... ..+|.+.|+. +||+.+|+|+..++.++.+|+..
T Consensus 323 -----D~f~~~~l~~~e~lG~~~~---~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~------------------ 376 (400)
T TIGR02430 323 -----EAFAAQALAVLRELGLADD---DARVNPNGGAIALGHPLGASGARLVLTALRQLERS------------------ 376 (400)
T ss_pred -----cHHHHHHHHHHHHcCCCCC---CCeECCCCchHhccChHHHHHHHHHHHHHHHHHhc------------------
Confidence 7765444 4556653211 1478888885 79999999999999999999861
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..++++++-..-||.-..+|||.
T Consensus 377 ------------------~~~~g~~~~c~~gG~g~a~~~e~ 399 (400)
T TIGR02430 377 ------------------GGRYALCTMCIGVGQGIALAIER 399 (400)
T ss_pred ------------------CCCEEEEEEccccChhhEEEEEe
Confidence 12456677677788888888874
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.5e-17 Score=166.50 Aligned_cols=179 Identities=17% Similarity=0.131 Sum_probs=149.4
Q ss_pred CCCEEEEECC-chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh-hcC
Q psy616 235 QGGTYLITGG-TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN-NIG 312 (1152)
Q Consensus 235 ~~~~~LITGg-~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~-~~G 312 (1152)
+.+.+||||+ .||||.++|+.|+++|..++...+|.+.-..+.. ..| +.....||++++++.++..++++ .+|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~---~~g--l~~~kLDV~~~~~V~~v~~evr~~~~G 80 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI---QFG--LKPYKLDVSKPEEVVTVSGEVRANPDG 80 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH---hhC--CeeEEeccCChHHHHHHHHHHhhCCCC
Confidence 4678999997 5999999999999999855555444444333322 223 67889999999999999999988 789
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
.||.++||||..= ..+..+.+.++.+++|++|+.|.+++++++...+.| ..+.||++.|+++..+.+-.+.|.|+
T Consensus 81 kld~L~NNAG~~C-~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik----aKGtIVnvgSl~~~vpfpf~~iYsAs 155 (289)
T KOG1209|consen 81 KLDLLYNNAGQSC-TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK----AKGTIVNVGSLAGVVPFPFGSIYSAS 155 (289)
T ss_pred ceEEEEcCCCCCc-ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH----ccceEEEecceeEEeccchhhhhhHH
Confidence 9999999999876 778899999999999999999999999999866554 34569999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
|+++.++++.+|-+.. ..+++++++-.|...
T Consensus 156 KAAihay~~tLrlEl~--PFgv~Vin~itGGv~ 186 (289)
T KOG1209|consen 156 KAAIHAYARTLRLELK--PFGVRVINAITGGVA 186 (289)
T ss_pred HHHHHHhhhhcEEeee--ccccEEEEeccccee
Confidence 9999999999987755 556788888666543
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.5e-17 Score=176.25 Aligned_cols=207 Identities=14% Similarity=0.086 Sum_probs=154.2
Q ss_pred EEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 240 LITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 240 LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
|||||+||||++++++|+++|++ |+++.|+. ..+...+.++ .+.++.++.||++|++++.+++++ +|++|+||
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li 74 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGAR-VTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAE----AGPFDHVV 74 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHh----cCCCCEEE
Confidence 69999999999999999999985 66666663 2333334443 366788999999999999888875 47999999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHHHH
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTV 398 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~~ 398 (1152)
||||... ..++.+.+.++|++++++|+.+++++.++ +.| .+.++||++||.++..+.+++..|+++|+++++
T Consensus 75 ~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~--~~~-----~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 146 (230)
T PRK07041 75 ITAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVARA--ARI-----APGGSLTFVSGFAAVRPSASGVLQGAINAALEA 146 (230)
T ss_pred ECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHhh--hhh-----cCCeEEEEECchhhcCCCCcchHHHHHHHHHHH
Confidence 9999877 66788889999999999999999999993 332 234789999999999999999999999999999
Q ss_pred HHHHHHhcccccCCCceEEEEeCCcccCcccccccccc--c---hhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 399 YAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--T---DFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 399 la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~---~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
|++.++.+.. .+++.+|.+|... +.|....... . ......... ....+++..+.+..++..+
T Consensus 147 ~~~~la~e~~----~irv~~i~pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 214 (230)
T PRK07041 147 LARGLALELA----PVRVNTVSPGLVD-TPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANG 214 (230)
T ss_pred HHHHHHHHhh----CceEEEEeecccc-cHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence 9999887643 2577788776543 3332111000 0 001111111 2356889999988877643
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-16 Score=174.41 Aligned_cols=206 Identities=17% Similarity=0.108 Sum_probs=144.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++|+.|+++|+. |++++|+... .. +.. ..+. ..++.+|++|.+++.+ .++++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~-Vi~~~r~~~~-~~-~~~-~~~~-~~~~~~D~~~~~~~~~-------~~~~i 80 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAK-VIGLTHSKIN-NS-ESN-DESP-NEWIKWECGKEESLDK-------QLASL 80 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEECCchh-hh-hhh-ccCC-CeEEEeeCCCHHHHHH-------hcCCC
Confidence 4689999999999999999999999985 5555665421 11 111 1122 3578999999987653 46789
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. . .+.+.++|++++++|+.|++++.++++|.|++........+++.||.++..+ ++...|+++|+
T Consensus 81 DilVnnAG~~~-~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKa 155 (245)
T PRK12367 81 DVLILNHGINP-G---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKR 155 (245)
T ss_pred CEEEECCccCC-c---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHH
Confidence 99999999754 2 3568999999999999999999999999986532222334555567666554 46788999999
Q ss_pred HHHHHH---HHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeeee
Q psy616 395 FQTVYA---KYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLV 471 (1152)
Q Consensus 395 ~l~~la---~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~v 471 (1152)
++..+. +.++.+.. ..++.+.++..|++. +.|. ....++++++.+.+.+.+..+...+++
T Consensus 156 al~~~~~l~~~l~~e~~--~~~i~v~~~~pg~~~-t~~~--------------~~~~~~~~~vA~~i~~~~~~~~~~~~~ 218 (245)
T PRK12367 156 LIGQLVSLKKNLLDKNE--RKKLIIRKLILGPFR-SELN--------------PIGIMSADFVAKQILDQANLGLYLIIV 218 (245)
T ss_pred HHHHHHHHHHHHHHhhc--ccccEEEEecCCCcc-cccC--------------ccCCCCHHHHHHHHHHHHhcCCceEEE
Confidence 986554 33333333 334566667777663 2231 012478999999998888877665554
Q ss_pred ech
Q psy616 472 LSG 474 (1152)
Q Consensus 472 ~~~ 474 (1152)
.+.
T Consensus 219 ~~~ 221 (245)
T PRK12367 219 TPN 221 (245)
T ss_pred ecC
Confidence 443
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-16 Score=188.06 Aligned_cols=261 Identities=20% Similarity=0.264 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHhc-CCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHH-HHHcCCC--CCccccccc
Q psy616 719 QRHLLQESWLALEDA-GYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARL-AYFMDLK--GPVMAINTA 794 (1152)
Q Consensus 719 ~rl~L~~a~~AledA-G~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ri-s~~~~l~--GPs~tvdta 794 (1152)
.-|..+++.+||+|+ |+++++++ .|++|+...+.. ....+.|+ ....|+. -|+++|+++
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID----~vi~g~~~~~~~-------------~~~~~ar~~~~~~Gl~~~~p~~~V~~a 94 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIE----DAIVGCAMPEAE-------------QGLNVARIGALLAGLPNSVGGVTVNRF 94 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCC----EEEEEecCCCCC-------------CCchHHHHHHHHcCCCCCCceeeecch
Confidence 457789999999997 99998888 789986543211 01224454 4556886 379999999
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH---HH----HHHHh---cCC----------------CC------
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---AY----IAMTS---AGM----------------LS------ 841 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~---~~----~~~~~---~g~----------------ls------ 841 (1152)
|+|++.|+++|++.|++|++|.+||+|++.+.. |. .+ ..+.. .+. ++
T Consensus 95 CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~ 174 (399)
T PRK09052 95 CASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDA 174 (399)
T ss_pred hhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHHHhCCCHHHHHH
Confidence 999999999999999999999999999985432 10 00 00000 000 00
Q ss_pred ------------CC-CCcc----cCCC-----------------------------------------CCCC-------c
Q psy616 842 ------------PD-GKCY----VFDE-----------------------------------------RANG-------L 856 (1152)
Q Consensus 842 ------------~~-g~~~----~Fd~-----------------------------------------~a~G-------~ 856 (1152)
|. |+-+ |.+. ..+| -
T Consensus 175 ~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt~~n~s 254 (399)
T PRK09052 175 FALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSS 254 (399)
T ss_pred HHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEECCccC
Confidence 11 1111 1110 0113 4
Q ss_pred ccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy616 857 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 936 (1152)
Q Consensus 857 v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~ 936 (1152)
.++||++++||.+.+.|.+.|.++++.|.|++...+.. .+...+...+++++|++||++|+||||+|.|
T Consensus 255 ~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~-----~~~~~~~~~A~~~al~~Agi~~~did~~ei~------ 323 (399)
T PRK09052 255 QTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPP-----EIMGIGPIEAIPAALKQAGLKQDDLDWIELN------ 323 (399)
T ss_pred CCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCC-----CccchhHHHHHHHHHHHcCCCHHHcCEEEeC------
Confidence 46899999999999999999999999999999875321 1223356789999999999999999999965
Q ss_pred CCHHHHHH--HHHHhcccCCCCCceeeeccCC--CCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCe
Q psy616 937 GDPVEINA--LHDVFKNKTYNQKFCAITSNKS--NIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 1012 (1152)
Q Consensus 937 gD~~E~~a--l~~~f~~~~~~~~~~~igsvKs--niGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 1012 (1152)
|+.+.+. ..+.|+-.. .+|...++ .+||+.+|+|+..++..+++|+++
T Consensus 324 -D~f~~~~l~~~e~lg~~~-----~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~---------------------- 375 (399)
T PRK09052 324 -EAFAAQSLAVIRDLGLDP-----SKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT---------------------- 375 (399)
T ss_pred -cHHHHHHHHHHHHhCCCC-----cccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc----------------------
Confidence 7755544 445565322 13433444 559999999999999999999872
Q ss_pred eeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1013 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1013 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++.++..+-||.-..+|||.
T Consensus 376 --------------~~~~g~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 376 --------------NLKYGMVTMCVGTGMGAAGIFER 398 (399)
T ss_pred --------------CCCeEEEEEcccCCceeEEEEEe
Confidence 12567778888889999999985
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.5e-17 Score=189.10 Aligned_cols=268 Identities=20% Similarity=0.251 Sum_probs=188.7
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Cccccc
Q psy616 715 MDPRQRHLLQESWLALEDA-GYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAIN 792 (1152)
Q Consensus 715 mdpq~rl~L~~a~~AledA-G~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvd 792 (1152)
+++ ..|+.+++.+||+|| |+++++++ +|++|....... .+ ...+..++..+|+.+ |+++|+
T Consensus 25 ~~~-~eL~~~A~~~AL~da~gl~~~dID----~vv~g~~~~~~~---------~g---~~~~~~~a~~lGl~~~p~~~v~ 87 (406)
T PRK07851 25 MRP-DDLAAQMVRAALDKVPALDPTDID----DLMLGCGLPGGE---------QG---FNMARVVAVLLGYDFLPGTTVN 87 (406)
T ss_pred CCH-HHHHHHHHHHHHHhccCCCHHHCC----EEEEEccccccc---------cc---CCHHHHHHHHcCCCCCCeeeee
Confidence 444 567899999999997 99999888 788875321100 00 124567889999987 999999
Q ss_pred ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH------------HHH---------------HHHh--------
Q psy616 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE------------AYI---------------AMTS-------- 836 (1152)
Q Consensus 793 taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~------------~~~---------------~~~~-------- 836 (1152)
++|+|++.|++.|+++|++|+||.+||+|++.+.. |. .+. .+..
T Consensus 88 ~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (406)
T PRK07851 88 RYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLP 167 (406)
T ss_pred ccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccccccccccccc
Confidence 99999999999999999999999999999885211 10 000 0000
Q ss_pred ---cCC------------CC-------------------CCCC---------------------cc-cCC----------
Q psy616 837 ---AGM------------LS-------------------PDGK---------------------CY-VFD---------- 850 (1152)
Q Consensus 837 ---~g~------------ls-------------------~~g~---------------------~~-~Fd---------- 850 (1152)
..+ ++ .+++ .| +++
T Consensus 168 ~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t~e~v~~s~~v 247 (406)
T PRK07851 168 DVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTTYEKVSQLKPV 247 (406)
T ss_pred cccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcCHHHHhcCCCc
Confidence 000 00 0110 00 010
Q ss_pred --C-----CCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Q psy616 851 --E-----RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPED 923 (1152)
Q Consensus 851 --~-----~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~d 923 (1152)
. ..|--.++||++++||.+.+.|.+.|+++++.|+|++...+.. .+...+...++++||++||++|+|
T Consensus 248 ~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agi~~~d 322 (406)
T PRK07851 248 FRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSP-----EIMGLGPVEASKQALARAGMSIDD 322 (406)
T ss_pred cCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCC-----CccchhHHHHHHHHHHHhCCCHHH
Confidence 0 0122235899999999999999999999999999998764321 122335678999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHH--HHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCC
Q psy616 924 INYIITHGTGTKLGDPVEINALH--DVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE 1001 (1152)
Q Consensus 924 I~yve~hgtgT~~gD~~E~~al~--~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~ 1001 (1152)
|||+|.| |+.....+. +.|+-.. .++.+.+-+..+||+.+|+|+..++.++.+|+.+
T Consensus 323 id~~ei~-------d~f~~~~l~~le~lg~~~---~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~----------- 381 (406)
T PRK07851 323 IDLVEIN-------EAFAAQVLPSARELGIDE---DKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH----------- 381 (406)
T ss_pred CCeehhh-------hHHHHHHHHHHHHhCCCc---cccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc-----------
Confidence 9999987 444444333 2333111 2455666677779999999999999999999761
Q ss_pred CcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1002 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1002 np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+-++++++..+-||.-..+|||..
T Consensus 382 -------------------------~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 382 -------------------------DKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred -------------------------CCCeEEEEEccccChhhEEEEEec
Confidence 124677888888999999999853
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-16 Score=184.73 Aligned_cols=264 Identities=19% Similarity=0.228 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCs 796 (1152)
.-|+.+++.+||+|||+.+++++ .|++|....+.. ....++..++..+|+.+ |.++|+++|+
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID----~vi~g~~~~~~~------------~g~~~a~~~~~~lGl~~~~p~~~V~~aCa 91 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPID----DLIIGCAMPEAE------------QGLNMARNIGALAGLPYTVPAITINRYCS 91 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCC----EEEEEecccccc------------ccchHHHHHHHHcCCCCCcceeehhhhhh
Confidence 45778999999999997767776 688886443200 00123445888999984 9999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-H-----------------HHH--HH------HHhcCCCC---------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-P-----------------EAY--IA------MTSAGMLS--------- 841 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~-----------------~~~--~~------~~~~g~ls--------- 841 (1152)
|++.|++.|++.|++|++|.+||+|++.+.. | ..+ +. ..+.|+-.
T Consensus 92 SG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~tre~~a~~av~ 171 (391)
T PRK07661 92 SGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQDAFAVR 171 (391)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999999999999999999985432 1 000 00 00111110
Q ss_pred --------CC-CCcc------------------------cCC---------------------------CCCCCcccccc
Q psy616 842 --------PD-GKCY------------------------VFD---------------------------ERANGLVPSEA 861 (1152)
Q Consensus 842 --------~~-g~~~------------------------~Fd---------------------------~~a~G~v~gEG 861 (1152)
|. |+-+ .++ ...|--.++||
T Consensus 172 s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~lt~~~~~~~~DG 251 (391)
T PRK07661 172 SHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNSSQMSDG 251 (391)
T ss_pred HHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCCEeccccCCCCCc
Confidence 11 1100 011 11222335899
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy616 862 VVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941 (1152)
Q Consensus 862 ~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E 941 (1152)
++++||.+.+.|.+.|.++++.|+|++..++.. .+...+...+++++|++||++|+||||+|.| |+.+
T Consensus 252 Aaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~~ei~-------d~f~ 319 (391)
T PRK07661 252 AAAVLLMDREKAESDGLKPLAKFRSFAVAGVPP-----EVMGIGPIAAIPKALKLAGLELSDIGLFELN-------EAFA 319 (391)
T ss_pred eEEEEEecHHHHHHCCCCceEEEEEEEEecCCC-----cccchHHHHHHHHHHHHcCCCHHHCCEEEeC-------CHHH
Confidence 999999999999999999999999999885421 1223466889999999999999999999965 8888
Q ss_pred HHHHHH--HhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccc
Q psy616 942 INALHD--VFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNK 1019 (1152)
Q Consensus 942 ~~al~~--~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~ 1019 (1152)
...+.. .|+-. ..++.+.+-+..+||+.+|+|+..++..+.+|+.+
T Consensus 320 ~~~l~~~e~lg~~---~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~----------------------------- 367 (391)
T PRK07661 320 SQSIQVIRELGLD---EEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR----------------------------- 367 (391)
T ss_pred HHHHHHHHHcCCC---CCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc-----------------------------
Confidence 888774 45432 12355666677779999999999999999999861
Q ss_pred cccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1020 KWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1020 ~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++.++..+-||.-..+|||.
T Consensus 368 -------~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 368 -------NEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred -------CCCeEEEEEccccChhhEEEEEe
Confidence 12567777777888888898874
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.2e-16 Score=172.88 Aligned_cols=217 Identities=14% Similarity=0.181 Sum_probs=160.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++++||||+||||..+++.|+++|+ .|++++|+... .+++.... .+.++.+|++|.+++.++++. ++++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~---~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~~~~ 78 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAA---LDRLAGET-GCEPLRLDVGDDAAIRAALAA----AGAF 78 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHH---HHHHHHHh-CCeEEEecCCCHHHHHHHHHH----hCCC
Confidence 568999999999999999999999987 57777776422 12222211 245788999999988877665 5789
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||... .....+.+.++|++++.+|+.+++++.+++.+.+++. ...++||++||.++..+.++...|+++|+
T Consensus 79 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~y~~sK~ 155 (245)
T PRK07060 79 DGLVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAA--GRGGSIVNVSSQAALVGLPDHLAYCASKA 155 (245)
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCcEEEEEccHHHcCCCCCCcHhHHHHH
Confidence 99999999876 6667788999999999999999999999999987532 22368999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccc--cccccchhHHhhc-CCCCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI--GNNEQTDFYFKSS-KQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~--~~~~~~~~~~~~~-g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++.+++.++.+.. ..++++.+|..|......+.. ............. .....++++..+.+..++..+
T Consensus 156 a~~~~~~~~a~~~~--~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 227 (245)
T PRK07060 156 ALDAITRVLCVELG--PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDA 227 (245)
T ss_pred HHHHHHHHHHHHHh--hhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 99999998876532 234688888877664432211 0000011111111 123478899999998877643
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-17 Score=177.88 Aligned_cols=183 Identities=12% Similarity=0.156 Sum_probs=151.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++..+|||++.|||++.|+.||++|.+ |+|++|+ +.++.+.++|++ .+.++.++.+|.++.+++.+-+.+.... .+
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~n-vvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~~ 126 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFN-VVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-LD 126 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-Cc
Confidence 588999999999999999999999995 8888888 566777888764 4678999999999988755444443333 47
Q ss_pred eeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
|.++|||+|+... ...+.+.+.+.+++++.+|+.++..+.+.++|.|.+ +..+.||++||.++..+.|..+.|+++
T Consensus 127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~---r~~G~IvnigS~ag~~p~p~~s~ysas 203 (312)
T KOG1014|consen 127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVE---RKKGIIVNIGSFAGLIPTPLLSVYSAS 203 (312)
T ss_pred eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhc---CCCceEEEeccccccccChhHHHHHHH
Confidence 9999999999762 345778888899999999999999999999999865 355779999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
|+|++.|++.+..+.. ..++.+-+|.+....
T Consensus 204 K~~v~~~S~~L~~Ey~--~~gI~Vq~v~p~~Va 234 (312)
T KOG1014|consen 204 KAFVDFFSRCLQKEYE--SKGIFVQSVIPYLVA 234 (312)
T ss_pred HHHHHHHHHHHHHHHH--hcCeEEEEeehhhee
Confidence 9999999999988755 334466667665543
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=185.24 Aligned_cols=261 Identities=16% Similarity=0.176 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHH-hcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccch
Q psy616 720 RHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 796 (1152)
Q Consensus 720 rl~L~~a~~Ale-dAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCs 796 (1152)
.|.-++..++|+ |+|+.+++++ .||+|....... ....++..++...||.+ |+++|+.+|+
T Consensus 28 ~L~~~a~~~al~r~a~i~~~~Id----~vi~G~~~~~~~------------~g~~~ar~~~l~~Gl~~~vp~~tV~~~Ca 91 (400)
T PRK13359 28 DLGAVPLKALVERNPDVDWAAID----DVIYGCANQAGE------------DNRNVARMSLLLAGLPHGVPGSTINRLCG 91 (400)
T ss_pred HHHHHHHHHHHHhccCCCHHHCC----EEEEEecccccc------------ccccHHHHHHHHcCCCCCCceEEEeccch
Confidence 355678899999 6899998887 789986542110 01235667788889975 9999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH------HHH----------------------HH------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA------YIA----------------------MT------------ 835 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~------~~~----------------------~~------------ 835 (1152)
||+.|+++|++.|++|++|++||||++.+.. |.. .+. +.
T Consensus 92 SG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ae~~a 171 (400)
T PRK13359 92 SGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVA 171 (400)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccccccccCCHHHHHHHHH
Confidence 9999999999999999999999999997543 310 000 00
Q ss_pred -hcCCC----------C--------CCCCcc-------------------------------------cCCCCCCCcc--
Q psy616 836 -SAGML----------S--------PDGKCY-------------------------------------VFDERANGLV-- 857 (1152)
Q Consensus 836 -~~g~l----------s--------~~g~~~-------------------------------------~Fd~~a~G~v-- 857 (1152)
+.|+- | ++|+.+ .|+. +|.+
T Consensus 172 ~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~~l~p~f~~--~g~lT~ 249 (400)
T PRK13359 172 TDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALAKLKGVVRP--DGTVTA 249 (400)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHhcCCCccCC--CCceec
Confidence 00000 0 112111 1221 2322
Q ss_pred -----cccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 858 -----PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 858 -----~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
++||++++||.+.+.|.+.|.++++.|.|++..... ..+...+...+++++|++||++|+||||+|.|
T Consensus 250 ~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~A~~~al~~AGl~~~DID~iei~-- 322 (400)
T PRK13359 250 GNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVE-----PRVMGIGPAPATQKLLARLGMTLDQFDVIELN-- 322 (400)
T ss_pred ccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CCccchhHHHHHHHHHHHhCCCHHHcCcCccC--
Confidence 489999999999999999999999999999886311 22345566899999999999999999999955
Q ss_pred CCCCCCHHHHHHHH--HHhcccCCCCCceeeeccCCC--CCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccC
Q psy616 933 GTKLGDPVEINALH--DVFKNKTYNQKFCAITSNKSN--IGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008 (1152)
Q Consensus 933 gT~~gD~~E~~al~--~~f~~~~~~~~~~~igsvKsn--iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~ 1008 (1152)
|..+...+. +.|+-.. ...+|.+.|+. +||+.+|+|+..++.++.+|+..
T Consensus 323 -----dafa~~~l~~~e~lg~~~---~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~------------------ 376 (400)
T PRK13359 323 -----EAFASQGLAVLRELGLAD---DDARVNPNGGAIALGHPLGASGARLVTTALYQLERT------------------ 376 (400)
T ss_pred -----cHhHHHHHHHHHHcCCCC---CCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhc------------------
Confidence 887766544 4454211 12578888886 79999999999999999999761
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++.++..+-||.-..+|||.
T Consensus 377 ------------------~~~~g~~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 377 ------------------GGRFALCTMCIGVGQGIAIAIER 399 (400)
T ss_pred ------------------CCCeEEEEEcccCCceeEEEEEe
Confidence 12566677777788888899884
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=186.20 Aligned_cols=248 Identities=22% Similarity=0.235 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC-CCCcccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL-KGPVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l-~GPs~tvdtaCsS 797 (1152)
..|+.+++++||+|||+++++++ ++++|....... ....+.+++..+|+ ..|.++|+.+|+|
T Consensus 17 ~eL~~~A~~~Al~dagl~~~~Id----~vi~g~~~~~~~-------------~~~~a~~va~~lGl~~~~~~~v~~~c~s 79 (375)
T cd00829 17 LELAAEAARAALDDAGLEPADID----AVVVGNAAGGRF-------------QSFPGALIAEYLGLLGKPATRVEAAGAS 79 (375)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEeccccccc-------------ccchHHHHHHHcCCCCcceeeEeCccHH
Confidence 57889999999999999887776 788876533211 12356778999999 5699999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHH---H------HHH---hcCCCC------------------------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAY---I------AMT---SAGMLS------------------------ 841 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~---~------~~~---~~g~ls------------------------ 841 (1152)
++.++++|++.|++|++|++||+|++.+...... . .+. ..+.+.
T Consensus 80 g~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~ 159 (375)
T cd00829 80 GSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLA 159 (375)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHHH
Confidence 9999999999999999999999999864431100 0 000 011111
Q ss_pred -------------CCCC----------------cccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecC
Q psy616 842 -------------PDGK----------------CYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYD 892 (1152)
Q Consensus 842 -------------~~g~----------------~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~d 892 (1152)
|... +.|+. ..|.-.++||++++||.+.+.|.+. .++++.|+|++..++
T Consensus 160 ~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~-~~~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~ 237 (375)
T cd00829 160 KVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLR-LLDCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASD 237 (375)
T ss_pred HHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecC
Confidence 0000 11221 1345567999999999999999877 667999999999988
Q ss_pred CCCCCCCC--CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hcccCC-----------CCCc
Q psy616 893 GKTNGITA--PNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNKTY-----------NQKF 958 (1152)
Q Consensus 893 G~~~~~~~--P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~~~-----------~~~~ 958 (1152)
.....-.. ....+...+++++|++||++++|||++|.|.+.|. .++..+... |+.... ....
T Consensus 238 ~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~----~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~ 313 (375)
T cd00829 238 TPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTI----AELLALEDLGFCEKGEGGKLVREGDTAIGGD 313 (375)
T ss_pred CccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHcCCCCCCchHHHHHCCCccCCCC
Confidence 76432211 24577789999999999999999999999999986 344444333 222111 1111
Q ss_pred eee---eccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 959 CAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 959 ~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
++| |..++. ||+.+|+|+..++.++.+|+..
T Consensus 314 ~pvN~~GG~la~-Ghp~gatG~~~~~e~~~qlrg~ 347 (375)
T cd00829 314 LPVNTSGGLLSK-GHPLGATGLAQAVEAVRQLRGE 347 (375)
T ss_pred ccccCCCchhcC-CCCccHHHHHHHHHHHHHhcCC
Confidence 233 444444 9999999999999999999874
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.7e-16 Score=172.81 Aligned_cols=215 Identities=12% Similarity=0.051 Sum_probs=154.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++++++||||+||||.++++.|+++|.. |++..|+. ..+....+++..+.++.++.+|++|++++.++++++.++++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAH-VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999985 55555643 23445556666677889999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-----CCCCCh
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-----GDFGSC 387 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~-----g~~g~~ 387 (1152)
++|.||||||... ... . ++...+++|+.|++++.+++.|+|.+ .+.||++||..+.. +.+.+.
T Consensus 84 ~~d~vi~~ag~~~-~~~---~---~~~~~~~vn~~~~~~l~~~~~~~~~~-----~~~iv~isS~~~~~~~~~~~~~~~~ 151 (248)
T PRK07806 84 GLDALVLNASGGM-ESG---M---DEDYAMRLNRDAQRNLARAALPLMPA-----GSRVVFVTSHQAHFIPTVKTMPEYE 151 (248)
T ss_pred CCcEEEECCCCCC-CCC---C---CcceeeEeeeHHHHHHHHHHHhhccC-----CceEEEEeCchhhcCccccCCcccc
Confidence 9999999998643 221 1 24568899999999999999988632 24699999965532 234567
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc----ccccchhHHhhcCCCCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG----NNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~----~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|++++.+++.++.+.. ..++++++|..|.... .+... .................+++|..+.+..++.
T Consensus 152 ~Y~~sK~a~e~~~~~l~~~~~--~~~i~v~~v~pg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 228 (248)
T PRK07806 152 PVARSKRAGEDALRALRPELA--EKGIGFVVVSGDMIEG-TVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVT 228 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHhh--ccCeEEEEeCCccccC-chhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhh
Confidence 899999999999998876533 3456788887654432 22111 0000000001111246789999999998887
Q ss_pred cC
Q psy616 464 QD 465 (1152)
Q Consensus 464 ~~ 465 (1152)
.+
T Consensus 229 ~~ 230 (248)
T PRK07806 229 AP 230 (248)
T ss_pred cc
Confidence 54
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.3e-16 Score=183.14 Aligned_cols=263 Identities=17% Similarity=0.197 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccchh
Q psy616 720 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACSS 797 (1152)
Q Consensus 720 rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCsS 797 (1152)
-|..+++.++|+++|+++++++ -|++|+....... ...++...+...|+. =|+++|+.+|+|
T Consensus 30 dLa~~A~~~al~~agi~p~~ID----~vi~G~~~~~~~~------------~~~~~r~a~~~~Gl~~~~pa~~Vn~aCaS 93 (402)
T PRK08242 30 RLAAGLLEALRDRNGLDTAAVD----DVVLGCVTPVGDQ------------GADIARTAVLAAGLPETVPGVQINRFCAS 93 (402)
T ss_pred HHHHHHHHHHHHHcCCCHHHcC----EEEEEecCCCccc------------cccHHHHHHHHcCCCCCCCeEEEcchhhh
Confidence 4567889999999999998887 6888876532110 112333344666883 499999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH----------HHH----HHhcCC-----------------------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMIS-PEA----------YIA----MTSAGM----------------------- 839 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~----------~~~----~~~~g~----------------------- 839 (1152)
++.||+.|+++|++|+.|.+||+|++.+.. |.. ... +..+|.
T Consensus 94 g~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~~~gisRe~~d~~A~~S 173 (402)
T PRK08242 94 GLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVDAYAVES 173 (402)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 999999999999999999999999996532 210 000 000000
Q ss_pred ----------------------------CCCCCCcc-------------cCCCCC--CC---------------------
Q psy616 840 ----------------------------LSPDGKCY-------------VFDERA--NG--------------------- 855 (1152)
Q Consensus 840 ----------------------------ls~~g~~~-------------~Fd~~a--~G--------------------- 855 (1152)
+.+|...| .|+... +|
T Consensus 174 h~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~~~~~~~~~~~~~vTa 253 (402)
T PRK08242 174 QQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERINHVHHA 253 (402)
T ss_pred HHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccccccccccccccCceec
Confidence 12222222 244311 23
Q ss_pred ---cccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 856 ---LVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 856 ---~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
-.+++|++++||.+.+.|.+.|.++++.|.|++...+......+.| ..+++++|++||++|+||||+|.|
T Consensus 254 gn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~-----~~a~~~al~~AGl~~~DID~~ei~-- 326 (402)
T PRK08242 254 GNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGP-----VPATRKALAKAGLTVDDIDLFELN-- 326 (402)
T ss_pred CcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccH-----HHHHHHHHHHcCCCHHHCCEEEec--
Confidence 2578999999999999999999999999999988755432222233 569999999999999999999987
Q ss_pred CCCCCCHHHHHHH--HHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCC
Q psy616 933 GTKLGDPVEINAL--HDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 1010 (1152)
Q Consensus 933 gT~~gD~~E~~al--~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~ 1010 (1152)
|+.+...+ .+.|+-. ..++.+.+-+..+||+.+|+|+..++.++.+|+.+
T Consensus 327 -----daFa~~~l~~~e~lG~~---~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~-------------------- 378 (402)
T PRK08242 327 -----EAFASVVLRFMQALDIP---HDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR-------------------- 378 (402)
T ss_pred -----chhhHHHHHHHHHhCCC---CcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc--------------------
Confidence 66665444 3445421 12466777778889999999999999999999861
Q ss_pred CeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1011 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..|++.++.-.-||.-..+|||.
T Consensus 379 ----------------~~~~g~~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 379 ----------------GKRTALITLCVGGGMGIATIIER 401 (402)
T ss_pred ----------------CCCeEEEEEcccCCceeEEEEEe
Confidence 12567777777788999999884
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.4e-16 Score=183.00 Aligned_cols=263 Identities=21% Similarity=0.252 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
..|+.+++.+||+|||+++++++ ++++|+...... + ...+..+....++. -|+++|+++|+
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID----~vi~g~~~~~~~----------~---~~~~~~~~~~~gl~~~~~~~~v~~~Ca 89 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVD----EVIMGQVLQAGA----------G---QNPARQAALKAGLPVEVPALTINKVCG 89 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----eEEEEEecCCCC----------C---CcHHHHHHHHcCCCCCCceeeecccch
Confidence 57889999999999999999888 788886542110 0 01122245566775 49999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH---------------HHHHH--Hh-cCCCC----------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---------------AYIAM--TS-AGMLS---------------- 841 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~---------------~~~~~--~~-~g~ls---------------- 841 (1152)
|++.||+.|++.|++|++|.+||+|++.+.. |. ....+ .. .+...
T Consensus 90 sg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG 169 (393)
T PRK05790 90 SGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYG 169 (393)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999886411 00 00000 00 00000
Q ss_pred ---------------------CCCCcc----c----------------------------------CCC-----CCCCcc
Q psy616 842 ---------------------PDGKCY----V----------------------------------FDE-----RANGLV 857 (1152)
Q Consensus 842 ---------------------~~g~~~----~----------------------------------Fd~-----~a~G~v 857 (1152)
..|..+ | ||. ..|--.
T Consensus 170 ~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~ 249 (393)
T PRK05790 170 ITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASG 249 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCC
Confidence 001000 0 111 013345
Q ss_pred cccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy616 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937 (1152)
Q Consensus 858 ~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~g 937 (1152)
++||++++||.+.+.|.+.+.++++.|+|++...... .+...+...+++++|++||++|+||||+|.|
T Consensus 250 ~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~a~~~Agi~~~did~~e~~------- 317 (393)
T PRK05790 250 INDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDP-----AIMGIGPVPAIRKALEKAGWSLADLDLIEIN------- 317 (393)
T ss_pred CCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCC-----CccchhHHHHHHHHHHHcCCCHHHCCEEEeC-------
Confidence 6899999999999999999999999999998874321 1122355689999999999999999999988
Q ss_pred CHHHHHH--HHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeec
Q psy616 938 DPVEINA--LHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 1015 (1152)
Q Consensus 938 D~~E~~a--l~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~ 1015 (1152)
|..+... ..+.|+-. ..++.+.+-|...||+.+|+|+..++.++.+|+..
T Consensus 318 d~f~~~~l~~~e~lg~~---~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~------------------------- 369 (393)
T PRK05790 318 EAFAAQALAVEKELGLD---PEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR------------------------- 369 (393)
T ss_pred cHHHHHHHHHHHHhCCC---hhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc-------------------------
Confidence 5555544 23345421 12455667777789999999999999999999873
Q ss_pred cccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1016 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1016 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..|+++++.-|-||..+.+|||.
T Consensus 370 -----------~~~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 370 -----------GAKKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred -----------CCCeEEEEEeccCCceeEEEEEc
Confidence 12678888899999999999985
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.6e-16 Score=168.37 Aligned_cols=214 Identities=16% Similarity=0.148 Sum_probs=159.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++||||+||||..+++.|+++|+ .|+++.|++. .+...+.+... .++.++.||++|++++.++++++...+++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999998 5566666543 23333444433 36888999999999999999999888999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-CCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~-g~~g~~~Yaaa 392 (1152)
+|.+||++|... ...+. +.++++.+++.|+.+.+.+.+.++|.|++ .+.||++||..+.. +.+....|+++
T Consensus 82 id~ii~~ag~~~-~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~~ss~~~~~~~~~~~~~Y~~s 153 (238)
T PRK05786 82 IDGLVVTVGGYV-EDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE-----GSSIVLVSSMSGIYKASPDQLSYAVA 153 (238)
T ss_pred CCEEEEcCCCcC-CCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc-----CCEEEEEecchhcccCCCCchHHHHH
Confidence 999999999765 33333 34889999999999999999999998642 25689999987754 45667889999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
|++++.+++.++.+.. ..++++++|.++.+.+ .|... .... .....+....++++..+.+.+++..
T Consensus 154 K~~~~~~~~~~~~~~~--~~gi~v~~i~pg~v~~-~~~~~--~~~~-~~~~~~~~~~~~~~va~~~~~~~~~ 219 (238)
T PRK05786 154 KAGLAKAVEILASELL--GRGIRVNGIAPTTISG-DFEPE--RNWK-KLRKLGDDMAPPEDFAKVIIWLLTD 219 (238)
T ss_pred HHHHHHHHHHHHHHHh--hcCeEEEEEecCccCC-CCCch--hhhh-hhccccCCCCCHHHHHHHHHHHhcc
Confidence 9999999988876643 2346888888766543 33211 0000 1112233457899999999888854
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.7e-16 Score=181.20 Aligned_cols=266 Identities=19% Similarity=0.200 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccccccchhH
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSS 798 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCsSs 798 (1152)
..|..+++.+||+|||+++++++ .|++|+...++... .+ ....+ .+.--++.+-|+++|+++|+|+
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID----~vi~g~~~~~~~~~--------~~-~~~~~-~l~a~~~~~~p~~~V~~~CaSg 98 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEID----DIITGCALQVGENW--------LY-GGRHP-IFLARLPYNIPAMAVDRQCASS 98 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----eeEEEeecCCCccc--------cc-HHHHH-HHHcCCCCCCcchhhhhhhHHH
Confidence 45778999999999999999988 78888654321100 00 01111 1222234467999999999999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEeccccCcC-HH----------HHH---HHHh----cCC----C----------C-----
Q psy616 799 LVATHIACQSLRQHECDTAISAGVNLMIS-PE----------AYI---AMTS----AGM----L----------S----- 841 (1152)
Q Consensus 799 l~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~----------~~~---~~~~----~g~----l----------s----- 841 (1152)
+.|++.|++.|++|++|++||+|++.+.. |. ... .+.. .+. . +
T Consensus 99 ~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a 178 (394)
T PRK06445 99 LTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMD 178 (394)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHH
Confidence 99999999999999999999999984321 10 000 0000 000 0 0
Q ss_pred --------------CCCCc------------------cc-------------------CC-----CCCCCcccccccEEE
Q psy616 842 --------------PDGKC------------------YV-------------------FD-----ERANGLVPSEAVVAV 865 (1152)
Q Consensus 842 --------------~~g~~------------------~~-------------------Fd-----~~a~G~v~gEG~~~v 865 (1152)
++|.- .| |+ ...|--.++||++++
T Consensus 179 ~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaav 258 (394)
T PRK06445 179 RWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYV 258 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEE
Confidence 11110 11 11 011223348999999
Q ss_pred EEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHH
Q psy616 866 VLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINAL 945 (1152)
Q Consensus 866 vLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al 945 (1152)
||.+.+.|.+.|++++++|+|++...+.. .+...+...+++++|++||++|+||||+|.|...+. .|+..+
T Consensus 259 vl~s~~~A~~~~~~~~a~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~f~~----~~l~~~ 329 (394)
T PRK06445 259 LLMSKKAVKKYGLKPMAKIRSFGFAGVPP-----AIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAV----VVLYAI 329 (394)
T ss_pred EEecHHHHHHCCCCceEEEEEEEEeccCC-----chhcchHHHHHHHHHHHcCCCHHHcCEEEecccchH----HHHHHH
Confidence 99999999999999999999999875421 223446688999999999999999999999987665 666666
Q ss_pred HHH-hcccCCCCCcee-eeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccc
Q psy616 946 HDV-FKNKTYNQKFCA-ITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNT 1023 (1152)
Q Consensus 946 ~~~-f~~~~~~~~~~~-igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~ 1023 (1152)
+.. |+.. ++- -|..++ +||+.+|+|+..++.++.+|+.
T Consensus 330 e~lg~~~~-----~vN~~GG~la-~Ghp~gatG~~~v~e~~~qL~~---------------------------------- 369 (394)
T PRK06445 330 KELGLDPE-----TVNIKGGAIA-IGHPLGATGARIVGTLARQLQI---------------------------------- 369 (394)
T ss_pred HHhCCCcc-----ccCCCCCHHH-cCCCccchHHHHHHHHHHHHHh----------------------------------
Confidence 654 2221 233 344454 4999999999999999999971
Q ss_pred cCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1024 VNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1024 ~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
...|+++++.-|-||..+.+|||.
T Consensus 370 --~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 370 --KGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred --cCCCEEEEEEcccCChhhEEEEEc
Confidence 123678888899999999999984
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.3e-16 Score=169.85 Aligned_cols=176 Identities=15% Similarity=0.111 Sum_probs=140.8
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
++++||||+||||.+++++|+++|+ +|++++|++...+. ++.. .++.++.+|++|.++++++++.+.. +++|+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~---~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~ 74 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTA---LQAL-PGVHIEKLDMNDPASLDQLLQRLQG--QRFDL 74 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHH---HHhc-cccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence 6899999999999999999999987 66666776543222 2222 2467789999999999999998854 58999
Q ss_pred EEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC---CCChhhhHH
Q psy616 317 VLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---FGSCDYAMG 392 (1152)
Q Consensus 317 vIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~---~g~~~Yaaa 392 (1152)
||||||+... ..++.+.+.+++++++.+|+.+++.+.+.+.|+|++ ..+.++++||..+..+. .+...|+++
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~~~iv~~ss~~g~~~~~~~~~~~~Y~~s 150 (225)
T PRK08177 75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP----GQGVLAFMSSQLGSVELPDGGEMPLYKAS 150 (225)
T ss_pred EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh----cCCEEEEEccCccccccCCCCCccchHHH
Confidence 9999998642 245678899999999999999999999999998743 12578999998776543 366789999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
|++++.|++.++.+.. ..++++.+|.+|...
T Consensus 151 K~a~~~~~~~l~~e~~--~~~i~v~~i~PG~i~ 181 (225)
T PRK08177 151 KAALNSMTRSFVAELG--EPTLTVLSMHPGWVK 181 (225)
T ss_pred HHHHHHHHHHHHHHhh--cCCeEEEEEcCCcee
Confidence 9999999999887643 356788999888664
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.4e-16 Score=183.12 Aligned_cols=268 Identities=23% Similarity=0.298 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCs 796 (1152)
.-|+.+++.+||+|||+++++++ +|++|+....+.. ....+-.++..+|+.+ |.++|+++|+
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID----~vv~G~~~~~~~~------------~~~~~r~~a~~~Gl~~~~pa~~V~~~Ca 135 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVG----DIVVGTVLAPGSQ------------RANECRMAAFYAGFPETVPVRTVNRQCS 135 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCcccc------------cchHHHHHHHHCCCCCCcceEEEeccCc
Confidence 56788999999999999999888 7888865432110 0112223456779975 8899999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHH--------------------HH------HHhcCCC---------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAY--------------------IA------MTSAGML--------- 840 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~--------------------~~------~~~~g~l--------- 840 (1152)
|++.|++.|++.|++|++|++||+|++.+.. |... ++ ..+.|.-
T Consensus 136 SG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAv 215 (452)
T PLN02287 136 SGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAV 215 (452)
T ss_pred hHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999999999999999999999985432 1000 00 0011111
Q ss_pred --------CCC-CCcc---------------------cCCCC---------------------------CCCcccccccE
Q psy616 841 --------SPD-GKCY---------------------VFDER---------------------------ANGLVPSEAVV 863 (1152)
Q Consensus 841 --------s~~-g~~~---------------------~Fd~~---------------------------a~G~v~gEG~~ 863 (1152)
.|. |+.+ +++.+ .|--.++||++
T Consensus 216 ksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAa 295 (452)
T PLN02287 216 ESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAG 295 (452)
T ss_pred HHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceE
Confidence 011 2211 11211 23344689999
Q ss_pred EEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy616 864 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 943 (1152)
Q Consensus 864 ~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~ 943 (1152)
++||.+.+.|.+.|.+|++++.|++... .. ..+...+...+++++|++||++|+||||+|.| |+....
T Consensus 296 alvl~see~A~~~~~~~~a~~~~~~~~~--~~---~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~-------daFa~~ 363 (452)
T PLN02287 296 AVLLMKRSVAMQKGLPILGVFRSFAAVG--VD---PAVMGIGPAVAIPAAVKAAGLELDDIDLFEIN-------EAFASQ 363 (452)
T ss_pred EEEEeeHHHHHHCCCCeEEEEEEEeecc--CC---CccchHHHHHHHHHHHHHcCCCHHHCCEEEec-------chHHHH
Confidence 9999999999999999999999987432 11 12234456789999999999999999999999 544333
Q ss_pred HHH--HHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccc
Q psy616 944 ALH--DVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 1021 (1152)
Q Consensus 944 al~--~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w 1021 (1152)
.+. +.|+-. ..++.+.+-+-.+||+.+|+|+..++.++.+|+..
T Consensus 364 ~l~~~e~lG~~---~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~------------------------------- 409 (452)
T PLN02287 364 FVYCCKKLGLD---PEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR------------------------------- 409 (452)
T ss_pred HHHHHHHcCCC---ccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhc-------------------------------
Confidence 332 223321 12355555566679999999999999999999761
Q ss_pred cccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1022 NTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1022 ~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
+..-+++.++-..-||.-..+|||...
T Consensus 410 ---~~~~~~gl~~~c~ggG~g~a~~ie~~~ 436 (452)
T PLN02287 410 ---GKDCRFGVVSMCIGTGMGAAAVFERGD 436 (452)
T ss_pred ---CCCCCeeEEEEccccCceeEEEEEecC
Confidence 000156677777788999999999764
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=166.21 Aligned_cols=211 Identities=17% Similarity=0.185 Sum_probs=159.4
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+++|||||+|+||+.+++.|+++ . +|+++.|+.... +++......+.++.+|++|.++++++++. ++++|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id 73 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERL---DELAAELPGATPFPVDLTDPEAIAAAVEQ----LGRLD 73 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHH---HHHHHHhccceEEecCCCCHHHHHHHHHh----cCCCC
Confidence 368999999999999999999998 5 566667764221 12221223477899999999998887765 35899
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
+|||+||... ...+.+.+.++|.+.++.|+.+.+.+.+.+++.|++. .++||++||..+..+.++...|+++|.+
T Consensus 74 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~v~~ss~~~~~~~~~~~~y~~~K~a 148 (227)
T PRK08219 74 VLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA----HGHVVFINSGAGLRANPGWGSYAASKFA 148 (227)
T ss_pred EEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCeEEEEcchHhcCcCCCCchHHHHHHH
Confidence 9999999876 5677788999999999999999999999999887542 3579999999999899999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
++.+++.++.+.. .. +++.+|.+|.+.+..+. ...... .....+...+++++..+++..++..+.
T Consensus 149 ~~~~~~~~~~~~~--~~-i~~~~i~pg~~~~~~~~-~~~~~~--~~~~~~~~~~~~~dva~~~~~~l~~~~ 213 (227)
T PRK08219 149 LRALADALREEEP--GN-VRVTSVHPGRTDTDMQR-GLVAQE--GGEYDPERYLRPETVAKAVRFAVDAPP 213 (227)
T ss_pred HHHHHHHHHHHhc--CC-ceEEEEecCCccchHhh-hhhhhh--ccccCCCCCCCHHHHHHHHHHHHcCCC
Confidence 9999998876532 22 68889998877543221 100000 001112235889999999998886643
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.4e-16 Score=182.10 Aligned_cols=277 Identities=18% Similarity=0.230 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCs 796 (1152)
...+..+++.+||+|||+++++++ ++++|...++.. ....++..+|++| |+++|+++|+
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID----~~~~g~~~~~~~----------------~~~~~~~~lGl~~~~~~~v~~~ca 81 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQ----QAYVGYVYGDST----------------SGQRALYEVGMTGIPIVNVNNNCS 81 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCC----eeEEEEEeCCcc----------------hhHHHHHHcCCCCCCCcccccccH
Confidence 468899999999999999988887 455554322210 0112566789999 9999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH---------HHHHH-------h-cCCCC-----------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA---------YIAMT-------S-AGMLS----------------- 841 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~---------~~~~~-------~-~g~ls----------------- 841 (1152)
|++.||..|+++|++|+||.+||+|++.+.. +.. +..+. . .+...
T Consensus 82 Sg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G 161 (391)
T PRK08256 82 TGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYG 161 (391)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999987431 100 00000 0 00100
Q ss_pred --------------------CCCCcc-cCC--------------CCCCCcccccccEEEEEcccchhhcCCCceEEEEEE
Q psy616 842 --------------------PDGKCY-VFD--------------ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRG 886 (1152)
Q Consensus 842 --------------------~~g~~~-~Fd--------------~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g 886 (1152)
|....| |.+ ...|--.+++|++++||.+.+.|.+-+-+.++.|+|
T Consensus 162 ~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g 241 (391)
T PRK08256 162 TTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVA 241 (391)
T ss_pred CCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEE
Confidence 110000 000 011222258999999999999998766456899999
Q ss_pred EEEecCCCCC-CC---CCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccc--------
Q psy616 887 SGINYDGKTN-GI---TAP-NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK-------- 952 (1152)
Q Consensus 887 ~a~~~dG~~~-~~---~~P-~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~-------- 952 (1152)
.+..++.... .. ... ...+...+.+++|++||++++|||++|.|...|. .|+..+... |+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~----~~l~~le~lg~~~~Ge~~~~~~ 317 (391)
T PRK08256 242 QAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSA----NELLTYEALGLCPEGEAEKFID 317 (391)
T ss_pred EEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcH----HHHHHHHHcCCCCCCchHHHHH
Confidence 8877653221 11 001 1234567999999999999999999999999876 455554443 3221
Q ss_pred ---CCCCCceee---eccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCC
Q psy616 953 ---TYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNE 1026 (1152)
Q Consensus 953 ---~~~~~~~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~ 1026 (1152)
......++| |..++. ||+.+|+|+..++.++++|+.+-=..++ .
T Consensus 318 ~G~~~~~G~~pvN~~GG~ls~-Ghp~gasG~~~~~e~~~QL~g~ag~~Qv-----------------------------~ 367 (391)
T PRK08256 318 DGDNTYGGRWVVNPSGGLLSK-GHPLGATGLAQCAELTWQLRGTAGARQV-----------------------------E 367 (391)
T ss_pred CCCccCCCCeeeCCCCccccC-CCCccHHHHHHHHHHHHHhcCCcCCCcC-----------------------------C
Confidence 111122344 677776 9999999999999999999874211110 1
Q ss_pred CccEEEEcCcCCCcceEEEEEc
Q psy616 1027 KLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1027 ~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
..++++++++|.|.++.-.||+
T Consensus 368 ~~~~~l~~~~G~~~~~~~~v~~ 389 (391)
T PRK08256 368 GARLALQHNLGLGGACVVTLYQ 389 (391)
T ss_pred ccceEEEeccccceeEEEEEEe
Confidence 2467889999955555555554
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.9e-16 Score=180.21 Aligned_cols=272 Identities=18% Similarity=0.215 Sum_probs=186.4
Q ss_pred cCCHHHHHHHHHHHHHHH-hcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Cccc
Q psy616 714 RMDPRQRHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMA 790 (1152)
Q Consensus 714 ~mdpq~rl~L~~a~~Ale-dAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~t 790 (1152)
.+++ ..|..++..+||+ |||+++++++ .|++|..... . .....++..+++..|+.. |+++
T Consensus 24 ~~~~-~~L~~~~~~~al~~~agl~~~~Id----~vi~g~~~~~-~-----------~~g~~~ar~~~~~~Gl~~~~p~~~ 86 (387)
T PRK08947 24 NVRA-EDLSAHLMRSLLARNPALDPAEID----DIIWGCVQQT-L-----------EQGFNIARNAALLAGIPHSVPAVT 86 (387)
T ss_pred CCCH-HHHHHHHHHHHHHhccCcChHHhC----eEEEEecccc-c-----------cccccHHHHHHHHcCCCCCCccee
Confidence 3444 5677888999999 5899998887 7888854311 0 000123445788889864 7799
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH------------------HHHH------HhcCCC-----
Q psy616 791 INTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA------------------YIAM------TSAGML----- 840 (1152)
Q Consensus 791 vdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~------------------~~~~------~~~g~l----- 840 (1152)
|+++|+||+.|+++|++.|++|++|++||||++.+.. |.. .+.+ .+.|+-
T Consensus 87 V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygisre~~~ 166 (387)
T PRK08947 87 VNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQD 166 (387)
T ss_pred eechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHHhCCCHHHHH
Confidence 9999999999999999999999999999999996432 100 0000 011100
Q ss_pred --------------------------------------CCCCCcc-------------cCCC------CCCCcccccccE
Q psy616 841 --------------------------------------SPDGKCY-------------VFDE------RANGLVPSEAVV 863 (1152)
Q Consensus 841 --------------------------------------s~~g~~~-------------~Fd~------~a~G~v~gEG~~ 863 (1152)
+++...| -|+. ..|--.++||++
T Consensus 167 ~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAa 246 (387)
T PRK08947 167 AFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGAS 246 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCceE
Confidence 0121111 1121 133345689999
Q ss_pred EEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy616 864 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 943 (1152)
Q Consensus 864 ~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~ 943 (1152)
++||.+.+.|.+.|++++++|+|++.+++-. ..+. .+...+++++|++||++|+||||+|.|..-|. .|+.
T Consensus 247 Avvl~s~~~A~~~g~~p~~~I~g~~~~~~~~--~~~~---~~~~~a~~~al~~Agl~~~DId~~El~d~F~~----~~l~ 317 (387)
T PRK08947 247 AMLVMSESRAKELGLKPRARIRSMAVAGCDP--SIMG---YGPVPATQKALKRAGLSISDIDVFELNEAFAA----QSLP 317 (387)
T ss_pred EEEEccHHHHHHCCCCccEEEEEEEEcCcCc--cccc---ccHHHHHHHHHHHcCCCHHHCCEEEecccchH----HHHH
Confidence 9999999999999999999999999884321 1111 12367889999999999999999999977664 4555
Q ss_pred HHHHH-hcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecccccccc
Q psy616 944 ALHDV-FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWN 1022 (1152)
Q Consensus 944 al~~~-f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~ 1022 (1152)
.++.. |.... ..+.-+-|..++. ||+.+|+|+..++..+.+|+.
T Consensus 318 ~~e~lg~~~~~-~~~vN~~GG~la~-GhP~GAtG~~~v~~l~~~L~~--------------------------------- 362 (387)
T PRK08947 318 CLKDLGLLDKM-DEKVNLNGGAIAL-GHPLGCSGARISTTLLNLMER--------------------------------- 362 (387)
T ss_pred HHHHcCCCCCC-CCCcCCCCchhhc-CCCccccHHHHHHHHHHHHHh---------------------------------
Confidence 55443 22211 1122234555554 999999999999999998876
Q ss_pred ccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1023 TVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1023 ~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
...|++.++++|-||.-+.+|||.
T Consensus 363 ---~~~~~gl~~~~~g~G~g~a~~~e~ 386 (387)
T PRK08947 363 ---KDAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_pred ---cCCCEEEEEEeecccceeEEEEEe
Confidence 023678888888777777777764
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-15 Score=179.03 Aligned_cols=243 Identities=21% Similarity=0.214 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
.-|+.+++.+||+|||+++++++ ++++|.... .. ....++..+|+++ |.+.++++|+|
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID----~iv~~~~~~----------~~-------~~~~la~~lGl~~~~~~~~~~g~~s 87 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVD----GLFTASPDD----------AL-------WGLSVAEYLGIRPRFVDGTMIGGSS 87 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecCCC----------CC-------cHHHHHHHcCCCCeeeccccCccHH
Confidence 46788999999999999988887 777764210 00 1135788889975 78889999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEe-ccccCcC---------------------HHHHHHH------HhcCCC---------
Q psy616 798 SLVATHIACQSLRQHECDTAISA-GVNLMIS---------------------PEAYIAM------TSAGML--------- 840 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvg-Gv~~~~~---------------------~~~~~~~------~~~g~l--------- 840 (1152)
++.||+.|++.|++|.+|.+||. |.+.... |..++.+ .+.|.-
T Consensus 88 ~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav 167 (384)
T PRK06158 88 FLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAV 167 (384)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 99999999999999999999974 6653210 0000000 000000
Q ss_pred --------CCCC----------------CcccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCC
Q psy616 841 --------SPDG----------------KCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTN 896 (1152)
Q Consensus 841 --------s~~g----------------~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~ 896 (1152)
.|.- -|.|+.. .|...++||++++||.+.+.|.+.+++ ...|+|++..++....
T Consensus 168 ~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~~-~d~~~~~DGAaAvVL~s~e~A~~l~~~-~v~i~g~~~~~~~~~~ 245 (384)
T PRK06158 168 AARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSV-RDCCLVTDGAGAVVMVRADRARDLPRP-PVYVLGAAAATWHRQI 245 (384)
T ss_pred HHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCch-hhcCCccCCeEEEEEecHHHHhhcCCC-cEEEEEEEEecCCccc
Confidence 0110 1223322 466678999999999999999876654 3557777766554321
Q ss_pred C-CCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccc-----------CCCCCceee--
Q psy616 897 G-ITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK-----------TYNQKFCAI-- 961 (1152)
Q Consensus 897 ~-~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~-----------~~~~~~~~i-- 961 (1152)
. ...+....+.+++++||++|||+|+|||++|.|..-|. .|+-.+... |+.. +.....+||
T Consensus 246 ~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~----~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~ 321 (384)
T PRK06158 246 SSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTI----NTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNT 321 (384)
T ss_pred ccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchH----HHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccC
Confidence 1 11122455688999999999999999999999999886 455444333 2221 111222333
Q ss_pred -eccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 962 -TSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 962 -gsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
|..|+. ||+ +|+|+..++.++++|+..
T Consensus 322 sGG~ls~-Ghp-gatG~~~~~E~~~QLrg~ 349 (384)
T PRK06158 322 NGGGLSC-VHP-GMYGLFLLIEAVRQLRGE 349 (384)
T ss_pred CChhhcC-CCC-chhhHHHHHHHHHHHcCC
Confidence 677776 999 999999999999999974
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=8e-16 Score=180.44 Aligned_cols=264 Identities=16% Similarity=0.177 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHH-hcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccc
Q psy616 719 QRHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTAC 795 (1152)
Q Consensus 719 ~rl~L~~a~~Ale-dAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaC 795 (1152)
.-|+.++..++|+ |+|+++++++ .|++|..... +.....++..++...||. =|+++|+++|
T Consensus 27 ~~L~~~a~~~al~~~agi~~~~Id----~v~~G~~~~~------------~~~~~~~ar~~~~~~Gl~~~vP~~tV~~aC 90 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVDWEAVD----DVIYGCANQA------------GEDNRNVARMSALLAGLPVSVPGTTINRLC 90 (401)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEecccc------------ccccchHHHHHHHHcCCCCCCceEEEeccc
Confidence 4567889999999 7999998887 6889864321 010122444478889994 4999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH-------HHH--------------------H-HH-----------
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PE-------AYI--------------------A-MT----------- 835 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~-------~~~--------------------~-~~----------- 835 (1152)
+||+.|++.|++.|++|++|++||||++.+.. |. .+. . +.
T Consensus 91 aSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~ 170 (401)
T PRK09050 91 GSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGVDSMPETAENV 170 (401)
T ss_pred ccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccccccccccHHHHHHHH
Confidence 99999999999999999999999999996532 21 000 0 00
Q ss_pred --hcCCC-------------------------------------------CCCCCcc------------c-CCC-----C
Q psy616 836 --SAGML-------------------------------------------SPDGKCY------------V-FDE-----R 852 (1152)
Q Consensus 836 --~~g~l-------------------------------------------s~~g~~~------------~-Fd~-----~ 852 (1152)
+.|+- ++|...| | |+. -
T Consensus 171 a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l~~l~~~~~~~g~lt~ 250 (401)
T PRK09050 171 AEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEALAKLKPVFRPDGTVTA 250 (401)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCCcccCCCEEeC
Confidence 00000 0111111 1 321 1
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
.|--.++||++++||.+.+.|.+.|.++++.|+|++...+... ....+...+++++|++||++|+|||++|.|
T Consensus 251 ~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DId~~ei~-- 323 (401)
T PRK09050 251 GNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPR-----IMGIGPAPATRKLLARLGLTIDQFDVIELN-- 323 (401)
T ss_pred CCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCc-----cccchHHHHHHHHHHHcCCCHHHCCccccC--
Confidence 2223358999999999999999999999999999988754321 122345789999999999999999999955
Q ss_pred CCCCCCHHHHHHHH--HHhcccCCCCCceeeeccCCC--CCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccC
Q psy616 933 GTKLGDPVEINALH--DVFKNKTYNQKFCAITSNKSN--IGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008 (1152)
Q Consensus 933 gT~~gD~~E~~al~--~~f~~~~~~~~~~~igsvKsn--iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~ 1008 (1152)
|+.+...+. +.|+-.. ...+|...++. +||+.+|+|+..++.++.+|+.+
T Consensus 324 -----D~f~~~~l~~~e~lg~~~---~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~------------------ 377 (401)
T PRK09050 324 -----EAFAAQGLAVLRQLGLAD---DDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT------------------ 377 (401)
T ss_pred -----cHhHHHHHHHHHHcCCCC---CCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc------------------
Confidence 777776554 3344211 12467777875 69999999999999999999861
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++.++..+-||.-..+|||.
T Consensus 378 ------------------~~~~g~~~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 378 ------------------GGRYALCTMCIGVGQGIALAIER 400 (401)
T ss_pred ------------------CCCeEEEEEcccccceeEEEEEe
Confidence 13567777778889999999885
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.8e-16 Score=179.13 Aligned_cols=268 Identities=18% Similarity=0.224 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHH-hcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccc
Q psy616 719 QRHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 795 (1152)
Q Consensus 719 ~rl~L~~a~~Ale-dAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaC 795 (1152)
.-|+.++..+||+ ++|+++++++ .||+|..... . .. + ..++..+.+..|+.. |+++|+.+|
T Consensus 26 ~~L~~~a~~~al~~~agl~~~~Id----~v~~G~~~~~-~----~~----g---~~~ar~~~~~~g~~~~~p~~tV~~~C 89 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKVDPAEVE----DIYWGCVQQT-L----EQ----G---FNIARNAALLAQIPHTSAAVTVNRLC 89 (385)
T ss_pred HHHHHHHHHHHHHhccCCCHHHcC----EEEEeccccc-c----cc----c---chHHHHHHHHCCCCCCcchhhhhhhh
Confidence 5677899999999 5799998888 7999954311 0 00 0 124444555666654 779999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH------------------HHHH------HhcCC-----------
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA------------------YIAM------TSAGM----------- 839 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~------------------~~~~------~~~g~----------- 839 (1152)
+||+.|++.|+++|++|++|++||||++.+.. |.. .+.+ .+.|+
T Consensus 90 aSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~ 169 (385)
T TIGR02445 90 GSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQDAFAAR 169 (385)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 99999999999999999999999999985431 100 0000 00000
Q ss_pred --------------------------------CCCCCCccc-------------CCC------CCCCcccccccEEEEEc
Q psy616 840 --------------------------------LSPDGKCYV-------------FDE------RANGLVPSEAVVAVVLK 868 (1152)
Q Consensus 840 --------------------------------ls~~g~~~~-------------Fd~------~a~G~v~gEG~~~vvLk 868 (1152)
++|+...|+ |+. ..|--.++||++++||.
T Consensus 170 sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAaavvL~ 249 (385)
T TIGR02445 170 SHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVM 249 (385)
T ss_pred HHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCceEEEEEe
Confidence 012211111 221 13334468999999999
Q ss_pred ccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH
Q psy616 869 RLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV 948 (1152)
Q Consensus 869 ~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~ 948 (1152)
+.+.|.+.|++++++|+|++.+.... ..+ ..+...+++++|+++||+|+||||+|.|...+. .|+..++..
T Consensus 250 s~e~A~~~g~~~~a~I~g~~~~~~~~--~~~---~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~----~~l~~~e~l 320 (385)
T TIGR02445 250 SEQRANELGLKPRARIRSMAVAGCDP--SIM---GYGPVPATQKALKRAGLSISDIDVFELNEAFAA----QALPCLKDL 320 (385)
T ss_pred cHHHHHHCCCCeeEEEEEEEEcCCCC--ccc---chhHHHHHHHHHHHcCCCHHHcCEEEEccccHH----HHHHHHHHc
Confidence 99999999999999999999874221 111 123467889999999999999999999977665 455555443
Q ss_pred -hcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCC
Q psy616 949 -FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEK 1027 (1152)
Q Consensus 949 -f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~ 1027 (1152)
|.... ..+.-+-|..++. ||+.+|+|+..++-.+..|+. ..
T Consensus 321 g~~~~g-~~~vN~~GG~la~-GhP~GATG~r~v~~l~~~l~~------------------------------------~~ 362 (385)
T TIGR02445 321 GLLDKM-DEKVNLNGGAIAL-GHPLGCSGARISTTLLNLMEQ------------------------------------KD 362 (385)
T ss_pred CCCCCC-CCCcCCCCchhhc-CCCccccHHHHHHHHHHHHHh------------------------------------cC
Confidence 22211 0111234666655 999999997766666633332 02
Q ss_pred ccEEEEcCcCCCcceEEEEEcc
Q psy616 1028 LRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1028 ~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
.|++++++.|-||.-..+|||.
T Consensus 363 ~~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 363 ATFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred CCeEEEEEecccChhheEEEEe
Confidence 3577888888899999999985
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.9e-15 Score=164.38 Aligned_cols=200 Identities=16% Similarity=0.163 Sum_probs=152.8
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
++++||||+|+||..++++|+++|++ |+++.|+... .++++..+ +.++.+|++|.++++++++++.. +++|+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~-v~~~~r~~~~---~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~--~~~d~ 73 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWR-VIATARDAAA---LAALQALG--AEALALDVADPASVAGLAWKLDG--EALDA 73 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCE-EEEEECCHHH---HHHHHhcc--ceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence 57999999999999999999999875 6666666422 23344333 45789999999999998877643 47999
Q ss_pred EEEcccccC-cCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh---hhhHH
Q psy616 317 VLHIAGISG-LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC---DYAMG 392 (1152)
Q Consensus 317 vIh~AG~~~-~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~---~Yaaa 392 (1152)
||||+|... ....+.+.+.++|++.+++|+.+++++.+++.|+|++ ..+.||++||.++..+..... .|+++
T Consensus 74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~~~~~Y~~s 149 (222)
T PRK06953 74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA----AGGVLAVLSSRMGSIGDATGTTGWLYRAS 149 (222)
T ss_pred EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc----cCCeEEEEcCcccccccccCCCccccHHh
Confidence 999999863 1345667799999999999999999999999998743 235799999998887754443 59999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
|++++.+++.++.+. .+.++.+|.+|... +.|.. ...++++++....+..++....
T Consensus 150 K~a~~~~~~~~~~~~----~~i~v~~v~Pg~i~-t~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 205 (222)
T PRK06953 150 KAALNDALRAASLQA----RHATCIALHPGWVR-TDMGG-------------AQAALDPAQSVAGMRRVIAQAT 205 (222)
T ss_pred HHHHHHHHHHHhhhc----cCcEEEEECCCeee-cCCCC-------------CCCCCCHHHHHHHHHHHHHhcC
Confidence 999999999887652 24578888877553 33321 1225788888888888776553
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.7e-15 Score=173.27 Aligned_cols=206 Identities=13% Similarity=0.056 Sum_probs=145.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++++||||+||||+++++.|+++|++++++ +|++. +..+.+...+..+..+.+|++|++++.+. ++++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l-~r~~~--~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~-------l~~I 246 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVAL-TSNSD--KITLEINGEDLPVKTLHWQVGQEAALAEL-------LEKV 246 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eCCHH--HHHHHHhhcCCCeEEEEeeCCCHHHHHHH-------hCCC
Confidence 47899999999999999999999999855544 45432 22222333344577889999999877543 4689
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCC-CCCEEEEecCCccccCCCCChhhhHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN-KLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~-~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
|.+|||||+.. . .+.+.+++++++++|+.|++++.++++|.|++.+.. ....+|+.|| ++ .+.++.+.|+++|
T Consensus 247 DiLInnAGi~~-~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASK 320 (406)
T PRK07424 247 DILIINHGINV-H---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSK 320 (406)
T ss_pred CEEEECCCcCC-C---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHH
Confidence 99999999754 2 367899999999999999999999999998754322 1234555554 43 3334567899999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeeeeec
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLS 473 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~v~~ 473 (1152)
+++.+|++.++.. . +..++ .+..|++.. .|. ....++++++++.+.+.+..+...+++..
T Consensus 321 aAl~~l~~l~~~~-~--~~~I~--~i~~gp~~t-~~~--------------~~~~~spe~vA~~il~~i~~~~~~i~v~~ 380 (406)
T PRK07424 321 RALGDLVTLRRLD-A--PCVVR--KLILGPFKS-NLN--------------PIGVMSADWVAKQILKLAKRDFRNIIVTI 380 (406)
T ss_pred HHHHHHHHHHHhC-C--CCceE--EEEeCCCcC-CCC--------------cCCCCCHHHHHHHHHHHHHCCCCEEEeCc
Confidence 9999998654432 1 23334 444565532 221 12248999999999999988877666543
Q ss_pred hhh
Q psy616 474 GEL 476 (1152)
Q Consensus 474 ~~~ 476 (1152)
..+
T Consensus 381 ~~~ 383 (406)
T PRK07424 381 NPL 383 (406)
T ss_pred hHH
Confidence 333
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.2e-15 Score=177.81 Aligned_cols=267 Identities=17% Similarity=0.216 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
.-|+.+++.+||+|||+++++++ .|++|+....+. ...++..++..+|+. =|+++|+++|+
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID----~vv~g~~~~~~~-------------~~~~a~~va~~~Gl~~~~p~~~V~~~Ca 89 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARID----DVIFGQGYPNGE-------------APAIGRVAALDAGLPVTVPGMQLDRRCG 89 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC-------------CChHHHHHHHHcCCCCCCceeehhhhhh
Confidence 45678999999999999998887 788886543211 012344678888986 48999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-H----H-----------HHHHH------------H-hcCCC-------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-P----E-----------AYIAM------------T-SAGML------- 840 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~----~-----------~~~~~------------~-~~g~l------- 840 (1152)
|++.|++.|+++|++|++|++||+|++.+.. | . .+..+ . ..+|.
T Consensus 90 Sg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~ 169 (404)
T PRK06205 90 SGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLR 169 (404)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCHHHHHHHHH
Confidence 9999999999999999999999999985431 0 0 00000 0 00110
Q ss_pred -----C----------------C---CCCc-------------------------------------c-cC---C-----
Q psy616 841 -----S----------------P---DGKC-------------------------------------Y-VF---D----- 850 (1152)
Q Consensus 841 -----s----------------~---~g~~-------------------------------------~-~F---d----- 850 (1152)
+ . .|.. + .| +
T Consensus 170 ~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~~~~p~g~l 249 (404)
T PRK06205 170 REYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQDPEATV 249 (404)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHhcCCCcCccCCCCCce
Confidence 0 0 0110 0 11 0
Q ss_pred CCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy616 851 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 930 (1152)
Q Consensus 851 ~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~h 930 (1152)
...|--.+++|++++||.+.+.|.+.|+++++.|.|++...+.... ...+...+++++|++||++|+||||+|.|
T Consensus 250 t~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agl~~~Did~~ei~ 324 (404)
T PRK06205 250 TAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSR-----MGIGPVPATEKALARAGLTLDDIDLIELN 324 (404)
T ss_pred eCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCcc-----ccccHHHHHHHHHHHcCCCHHHCCEeeec
Confidence 1122223479999999999999999999999999999987553211 11355788999999999999999999987
Q ss_pred CCCCCCCCHHHHHHHH--HHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccC
Q psy616 931 GTGTKLGDPVEINALH--DVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008 (1152)
Q Consensus 931 gtgT~~gD~~E~~al~--~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~ 1008 (1152)
|+.+...+. +.|+-......++.+..-+...||+.+|+|+..++.++.+|+..
T Consensus 325 -------d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~------------------ 379 (404)
T PRK06205 325 -------EAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR------------------ 379 (404)
T ss_pred -------cHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc------------------
Confidence 555443333 22331110001244555556669999999999999999999872
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
..|+++++..+-||.-..+|||..
T Consensus 380 ------------------~~~~gl~~~c~~gg~g~a~~~e~~ 403 (404)
T PRK06205 380 ------------------QARYGLETMCIGGGQGLAAVFERV 403 (404)
T ss_pred ------------------CCCeEEEEEeccCChhhEEEEEec
Confidence 126778888888999999999853
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.1e-16 Score=179.99 Aligned_cols=244 Identities=17% Similarity=0.178 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
.-|+.++..+||+|+|+++++++ .|++|....+... ..+ ++..++...|+. -|.++|+.+|+
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id----~v~~G~~~~~~~~-----------~~~-~ar~~~~~~Glp~~~p~~tV~~~Ca 90 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIE----DVILGCTNQAGED-----------SRN-VARNALLLAGLPVTVPGQTVNRLCA 90 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc-----------ccc-HHHHHHHhcCCCCCCceeeeechhh
Confidence 45778999999999999998887 7899865322110 012 233477778886 59999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH-------------H-HHH--------------HH------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE-------------A-YIA--------------MT------------ 835 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~-------------~-~~~--------------~~------------ 835 (1152)
||+.|++.|++.|++|++|++||||++.+.. |. . +.. +.
T Consensus 91 SG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~mg~~ae~~~ 170 (401)
T PRK08131 91 SGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPETGDNVA 170 (401)
T ss_pred hHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccCCHHHHHHHHH
Confidence 9999999999999999999999999986432 11 0 000 00
Q ss_pred -hcCCC----------C--------CCCCc----ccCCCC---------------------------------------C
Q psy616 836 -SAGML----------S--------PDGKC----YVFDER---------------------------------------A 853 (1152)
Q Consensus 836 -~~g~l----------s--------~~g~~----~~Fd~~---------------------------------------a 853 (1152)
+.|+- | +.++- .|.+.+ .
T Consensus 171 ~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l~p~f~~g~lt~~ 250 (401)
T PRK08131 171 AEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKLKPLFEGGVVTAG 250 (401)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcCCCCCCCCCccCC
Confidence 00000 0 11110 022100 0
Q ss_pred CCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy616 854 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTG 933 (1152)
Q Consensus 854 ~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtg 933 (1152)
|---++||++++||.+.+.|.+.|+++++.|.|++...+... +...+-..+++++|++||++|+|||++|.|...
T Consensus 251 ~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~a~~~agl~~~did~~ei~d~F 325 (401)
T PRK08131 251 NASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPR-----IMGIGPVEAIKKALARAGLTLDDMDIIEINEAF 325 (401)
T ss_pred cCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCc-----cccchHHHHHHHHHHHcCCCHHHCCeehhccHH
Confidence 333468999999999999999999999999999998865321 112345789999999999999999999998554
Q ss_pred CCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhc
Q psy616 934 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 989 (1152)
Q Consensus 934 T~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~ 989 (1152)
|. .|+..+ +.++-.....+.-+-|+.++. ||+.+|+|+..++.++.+|+.
T Consensus 326 a~----~~l~~~-e~lg~~~~~~~vN~~GG~la~-GhP~gAtG~~~~~el~~qL~~ 375 (401)
T PRK08131 326 AS----QVLGCL-KGLGVDFDDPRVNPNGGAIAV-GHPLGASGARLALTAARELQR 375 (401)
T ss_pred HH----HHHHHH-HHcCCCCCCCCccCCccHHhc-CCchhhhHHHHHHHHHHHHHh
Confidence 43 233222 223311011111223555544 999999999999999999987
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.5e-16 Score=181.19 Aligned_cols=264 Identities=19% Similarity=0.211 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaCs 796 (1152)
.-|+.+++.+||+|||+++++++ .|++|.....+. ..+ ++...+...|+ +-|+++|+.+|+
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID----~vi~G~~~~~~~------------~~~-~~~~~~l~ag~~~~~p~~~V~~aCa 94 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQID----EVVMGCVLPAGQ------------GQA-PARQAALGAGLPLSVGCTTVNKMCG 94 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCCCcc------------chH-HHHHHHHcCCCCCCccEeeccccch
Confidence 45778999999999999998887 688886542110 111 12112223344 347799999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH--H-------------HHHH--Hhc-CCC-----------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE--A-------------YIAM--TSA-GML----------------- 840 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~--~-------------~~~~--~~~-g~l----------------- 840 (1152)
|++.|++.|++.|++|++|++||+|++.+.. |. . ...+ ... ..+
T Consensus 95 SG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~y 174 (397)
T PRK06954 95 SGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEY 174 (397)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHHHHHHHHHHh
Confidence 9999999999999999999999999996541 21 0 0000 000 000
Q ss_pred --C-------------------CCCCcc----cCCCC-------------------------------------CCCccc
Q psy616 841 --S-------------------PDGKCY----VFDER-------------------------------------ANGLVP 858 (1152)
Q Consensus 841 --s-------------------~~g~~~----~Fd~~-------------------------------------a~G~v~ 858 (1152)
+ +.+.-+ |++.. .|--.+
T Consensus 175 gitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~f~~~g~lt~~~~~~~ 254 (397)
T PRK06954 175 GFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPAFSKTGTVTAANSSSI 254 (397)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCccCCCCcEEccccCCC
Confidence 0 122211 12100 111234
Q ss_pred ccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy616 859 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 938 (1152)
Q Consensus 859 gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD 938 (1152)
+||++++||.+.+.|.+.|+++++.|.|++...+.... ...+...+++++|+++|++|+||||+|.|...+.
T Consensus 255 ~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~Did~~ei~d~fa~--- 326 (397)
T PRK06954 255 SDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSK-----FTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAV--- 326 (397)
T ss_pred CCceEEEEEecHHHHHHCCCCceEEEEEEEecccCccc-----ccchHHHHHHHHHHHcCCCHHHCCEEehhhHHHH---
Confidence 89999999999999999999999999998765332111 1124478999999999999999999999966654
Q ss_pred HHHHHHHHHH-hcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccc
Q psy616 939 PVEINALHDV-FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKS 1017 (1152)
Q Consensus 939 ~~E~~al~~~-f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~ 1017 (1152)
.|+..+... |.. .++.+.+-+..+||+.+|+|+..++.++.+|+..
T Consensus 327 -~~l~~~e~lg~~~-----~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~--------------------------- 373 (397)
T PRK06954 327 -VTMAAMKEHGLPH-----EKVNVNGGACALGHPIGASGARILVTLIGALRAR--------------------------- 373 (397)
T ss_pred -HHHHHHHHhCCCc-----ccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 455554443 221 2456667777789999999999999999999871
Q ss_pred cccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1018 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1018 ~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
.-++..++..+-||.-+.+|||.
T Consensus 374 ---------~g~~~v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 374 ---------GGKRGVASLCIGGGEATAMGIEL 396 (397)
T ss_pred ---------CCCeEEEEEccccchhhEEEEEe
Confidence 11345566667788888888874
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.8e-16 Score=180.20 Aligned_cols=263 Identities=21% Similarity=0.253 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
.-|..+++.+||+|||+++++++ .|++|+..... . + ...+..++..+|+. =|.++|+++|+
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID----~vi~g~~~~~~------~----~---~~~~~~~~~~~Gl~~~~p~~~V~~~Ca 89 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVE----EVIMGTVLQGG------Q----G---QIPSRQAARAAGIPWEVQTETVNKVCA 89 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCC------C----C---CCHHHHHHHHcCCCCCcceeehhhhhh
Confidence 35678999999999999998887 78888654310 0 0 12333467888984 59999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHHH------------HH--------Hh--cC--C------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI------------AM--------TS--AG--M------------ 839 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~~------------~~--------~~--~g--~------------ 839 (1152)
|++.|++.|++.|++|++|.+||+|++.+.. |.... .+ .. .+ |
T Consensus 90 Sg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~yg 169 (393)
T PRK08235 90 SGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELG 169 (393)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHHHHHHHHcC
Confidence 9999999999999999999999999986432 21000 00 00 00 0
Q ss_pred C--------------------------------------------CCCCCcc-------------cCCC-----CCCCcc
Q psy616 840 L--------------------------------------------SPDGKCY-------------VFDE-----RANGLV 857 (1152)
Q Consensus 840 l--------------------------------------------s~~g~~~-------------~Fd~-----~a~G~v 857 (1152)
+ +|+...| .|+. ..|--.
T Consensus 170 itre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~g~lt~~~~~~ 249 (393)
T PRK08235 170 ISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTITAGNAPG 249 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCcccCCCcEeccccCC
Confidence 0 0111111 0110 012222
Q ss_pred cccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy616 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937 (1152)
Q Consensus 858 ~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~g 937 (1152)
++||++++||.+.+.|.+.|++++++|.|++...+.... + + .....+++++|++||++|+|||++|.|
T Consensus 250 ~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~-~--~--~~~~~a~~~al~~agl~~~did~~e~~------- 317 (393)
T PRK08235 250 VNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD-F--P--RTPGYAINALLEKTGKTVEDIDLFEIN------- 317 (393)
T ss_pred CCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh-h--c--chHHHHHHHHHHHhCCCHHHCCeehhc-------
Confidence 489999999999999999999999999998765432211 1 1 123579999999999999999999987
Q ss_pred CHHHHHHH--HHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeec
Q psy616 938 DPVEINAL--HDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 1015 (1152)
Q Consensus 938 D~~E~~al--~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~ 1015 (1152)
|+.+...+ .+.|+-. ..++.+.+-+..+||+.+|+|+..++.++.+|+.+
T Consensus 318 d~f~~~~l~~~e~lg~~---~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~------------------------- 369 (393)
T PRK08235 318 EAFAAVALASTEIAGID---PEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR------------------------- 369 (393)
T ss_pred chhHHHHHHHHHHhCCC---cccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc-------------------------
Confidence 55443333 2344421 12456666777789999999999999999999862
Q ss_pred cccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1016 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1016 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++..+...-||.-..+|||.
T Consensus 370 -----------~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 370 -----------GGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred -----------CCCeEEEEEcccccceEEEEEEe
Confidence 11345666667788989999884
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.7e-15 Score=174.23 Aligned_cols=249 Identities=17% Similarity=0.162 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCC--CCCCceEEEEEeccCCchhccccccccccchhhHHHHHHH-------HHcCCC-CCc
Q psy616 719 QRHLLQESWLALEDAGYGPNQ--IANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLA-------YFMDLK-GPV 788 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~--l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris-------~~~~l~-GPs 788 (1152)
..|..+++.+||+|||+++++ ++ +||+|......... ...++..+. ..+++. -|+
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID----~vi~G~~~~~~~~~-----------~~~~a~~~~~~~gl~~~~~gl~~~p~ 113 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVD----KVVVGNFLGELFSS-----------QGHLGPAAVGSLGQSGASNALLYKPA 113 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcC----EEEEEecccccccc-----------ccchHHHHHHhccCcccccccCCCce
Confidence 457789999999999999988 87 78888653221100 011122233 445664 499
Q ss_pred ccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcC---------------------------HHHHH----HHHhc
Q psy616 789 MAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS---------------------------PEAYI----AMTSA 837 (1152)
Q Consensus 789 ~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~---------------------------~~~~~----~~~~~ 837 (1152)
++|+++|+|++.|++.|+++|++|++|++||+|++.+.. |..+. .+.+.
T Consensus 114 ~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ym~~~ 193 (438)
T PTZ00455 114 MRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFTFPCLFAKRMKYIQEH 193 (438)
T ss_pred eEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999985322 10010 01122
Q ss_pred CCCC------------CCCCcccC----------CC----------------------CCCCcccccccEEEEEcccchh
Q psy616 838 GMLS------------PDGKCYVF----------DE----------------------RANGLVPSEAVVAVVLKRLSRA 873 (1152)
Q Consensus 838 g~ls------------~~g~~~~F----------d~----------------------~a~G~v~gEG~~~vvLk~l~~A 873 (1152)
+-++ .++.-.|+ +. -.|--..++|++++||.+.+.|
T Consensus 194 ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~sDGAaA~vl~See~A 273 (438)
T PTZ00455 194 GHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQVSDGGAGLVLASEEGL 273 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCccccceEEEEecHHHH
Confidence 2122 01111121 11 1122234799999999999999
Q ss_pred hcCCCce----EEEEEEEEEecCCCCC---CCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHH
Q psy616 874 LSDGDPI----HAIIRGSGINYDGKTN---GITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALH 946 (1152)
Q Consensus 874 ~~dgd~i----~avI~g~a~~~dG~~~---~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~ 946 (1152)
.+-|.+. .+.|+|++...+.... .++. -... ..+++++|++||++|+|||++|.|..-|. .|+-.+.
T Consensus 274 ~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~-~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~daFa~----~~l~~~e 347 (438)
T PTZ00455 274 QKMGLSPNDSRLVEIKSLACASGNLYEDPPDATR-MFTS-RAAAQKALSMAGVKPSDLQVAEVHDCFTI----AELLMYE 347 (438)
T ss_pred HhcCCCCCCCccEEEEEEEEecCCcccCcccccc-chHH-HHHHHHHHHHcCCCHHHCcEeeecccChH----HHHHHHH
Confidence 8888776 6899999887653211 1111 1223 68999999999999999999999988876 4554444
Q ss_pred HH-hccc-----------CCC---CCceeeeccCCCCCccccchhhHHHHHHHHhhhc
Q psy616 947 DV-FKNK-----------TYN---QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 989 (1152)
Q Consensus 947 ~~-f~~~-----------~~~---~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~ 989 (1152)
.. |+.. +.. .+..+-|..++. ||+.+|+|+..++.++.+|+.
T Consensus 348 ~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~-GHP~gAtG~~~v~e~~~QLrg 404 (438)
T PTZ00455 348 ALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSF-GHPVGATGVKQIMEVYRQMKG 404 (438)
T ss_pred HcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhc-CCCcchHHHHHHHHHHHHHhh
Confidence 33 2221 001 111233677776 999999999999999999986
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.4e-15 Score=176.58 Aligned_cols=265 Identities=18% Similarity=0.173 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaCs 796 (1152)
..|..+++.+||+|||+++++++ +|++|....... .. ..++..+....+| ..|.++|+++|+
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID----~vv~g~~~~~~~-----------~~-~~~~~~~~l~~gl~~~~p~~~v~~aca 90 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVD----DVIFGCVDTIGP-----------QA-GNIARTSWLAAGLPEEVPGVTVDRQCG 90 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEEeeccCCc-----------cc-ccHHHHHHHHcCCCCCCceeeecchhh
Confidence 45789999999999999998887 788885311000 00 0011112223444 579999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH--H--HH---H----------H-HhcCCC--C--------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE--A--YI---A----------M-TSAGML--S-------------- 841 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~--~--~~---~----------~-~~~g~l--s-------------- 841 (1152)
||+.|++.|+++|++|+||++||+|++.+.. |. . .. . + ...+.. +
T Consensus 91 Sg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~~yG~ 170 (382)
T PRK07801 91 SSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGI 170 (382)
T ss_pred hHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999984422 21 0 00 0 0 001110 0
Q ss_pred -------------------C-CCCcc----cCC----------------------------CCCCCcccccccEEEEEcc
Q psy616 842 -------------------P-DGKCY----VFD----------------------------ERANGLVPSEAVVAVVLKR 869 (1152)
Q Consensus 842 -------------------~-~g~~~----~Fd----------------------------~~a~G~v~gEG~~~vvLk~ 869 (1152)
| .|..+ |++ ...|--.++||++++||.+
T Consensus 171 tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa~il~s 250 (382)
T PRK07801 171 SREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASAVLLAS 250 (382)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEEEEEec
Confidence 0 01110 110 0122333579999999999
Q ss_pred cchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh
Q psy616 870 LSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVF 949 (1152)
Q Consensus 870 l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f 949 (1152)
.+.|.+.|.+.++.|.|++...+......+.| ..+++++|++||++|+|||++|.|...|. .|+..+...
T Consensus 251 ~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~a~~~a~~~agi~~~did~~e~~d~Fa~----~~~~~~e~l- 320 (382)
T PRK07801 251 ERAVKRHGLTPRARIHHLSVRGDDPVFMLTAP-----IPATRYALEKTGLSIDDIDVVEINEAFAP----VVLAWLKET- 320 (382)
T ss_pred HHHHHHCCCCccEEEEEEEEecCChHhhccCh-----HHHHHHHHHHcCCCHHHcCEeeecccchH----HHHHHHHHh-
Confidence 99999889888899999876543211111222 46899999999999999999999987774 555555443
Q ss_pred cccCCCCCceee-eccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCc
Q psy616 950 KNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKL 1028 (1152)
Q Consensus 950 ~~~~~~~~~~~i-gsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~ 1028 (1152)
+-.. +++-. |..++ +||+.+|+|+..++.++.+|+.. ..
T Consensus 321 G~~~---~pvN~~GG~l~-~Ghp~gasG~~~~~e~~~qL~~~------------------------------------~~ 360 (382)
T PRK07801 321 GADP---AKVNPNGGAIA-LGHPLGATGAKLMTTLLHELERT------------------------------------GG 360 (382)
T ss_pred CCCc---hhcCCCcchhh-hcCcHHHHHHHHHHHHHHHHHhc------------------------------------CC
Confidence 2111 12323 44444 49999999999999999999871 12
Q ss_pred cEEEEcCcCCCcceEEEEEcc
Q psy616 1029 RIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1029 r~a~v~sfG~gG~nah~il~~ 1049 (1152)
|++..++.|.||+.+.+|||.
T Consensus 361 ~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 361 RYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred CEEEEEEcccccceeEEEEEe
Confidence 567788888888888888863
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.1e-15 Score=172.62 Aligned_cols=263 Identities=16% Similarity=0.176 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
.-|+.+++.++|+|+|+++++++ .|++|...... .....++-.++...||. =|+++|+++|+
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id----~v~~G~~~~~~------------~q~~~~ar~~~l~~Gl~~~~p~~tV~~~Ca 90 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVE----QVIGGCVTQAG------------EQSNNITRTAWLHAGLPYHVGATTIDCQCG 90 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccc------------cccchHHHHHHHhCCCCCCCceEEEecccc
Confidence 45778999999999999998887 68888643110 00011333345557886 48999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHHH-------------HH-------------HhcCCC---------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI-------------AM-------------TSAGML--------- 840 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~~-------------~~-------------~~~g~l--------- 840 (1152)
||+.|++.|++.|++|++|++||||++.+.. |.... .+ .+.|+-
T Consensus 91 SG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~ygisre~~d~~a~ 170 (387)
T PRK07850 91 SAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGL 170 (387)
T ss_pred cHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999999999999999999999997543 21000 00 000000
Q ss_pred -C--------CC----------------------CC---------------------cccCCCCCCCc-------ccccc
Q psy616 841 -S--------PD----------------------GK---------------------CYVFDERANGL-------VPSEA 861 (1152)
Q Consensus 841 -s--------~~----------------------g~---------------------~~~Fd~~a~G~-------v~gEG 861 (1152)
| .+ +. ...| .+|. .+++|
T Consensus 171 ~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~---~~~~~t~~~~~~~sDG 247 (387)
T PRK07850 171 RSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVL---EGGIHTAGTSSQISDG 247 (387)
T ss_pred HHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCC---CCCCccchhcCCcCCc
Confidence 0 00 11 1123 2344 35799
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy616 862 VVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941 (1152)
Q Consensus 862 ~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E 941 (1152)
++++||.+.+.|.+.|.+..+.|+|++...+-.. .. ..+...+++++|++||++|+|||++|.|..-+. .|
T Consensus 248 Aaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~--~~---~~~~~~a~~~al~~agl~~~did~~ei~d~F~~----~~ 318 (387)
T PRK07850 248 AAAVLWMDEDRARALGLRPRARIVAQALVGAEPY--YH---LDGPVQATAKVLEKAGMKIGDIDLVEINEAFAS----VV 318 (387)
T ss_pred eEEEEEecHHHHHHcCCCCcEEEEEEEEeccCch--hh---cchHHHHHHHHHHHcCCCHHHcCeeeecccchH----HH
Confidence 9999999999999989888899999886432111 11 234478999999999999999999999977664 34
Q ss_pred HHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccc
Q psy616 942 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 1021 (1152)
Q Consensus 942 ~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w 1021 (1152)
+..+ +.|+-.. .+.-+-|..++. ||+.+|+|+..++.++.+|+.+
T Consensus 319 l~~~-e~lg~~~--~pvN~~GG~la~-Ghp~gatG~~~v~e~~~qL~~~------------------------------- 363 (387)
T PRK07850 319 LSWA-QVHEPDM--DKVNVNGGAIAL-GHPVGSTGARLITTALHELERT------------------------------- 363 (387)
T ss_pred HHHH-HHcCCCC--CCcCCCCchhhc-CCCcchhHHHHHHHHHHHHHhc-------------------------------
Confidence 4333 3344221 122234555555 9999999999999999999761
Q ss_pred cccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1022 NTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1022 ~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++.++..+-||.-..+|||.
T Consensus 364 -----~~~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 364 -----DKSTALITMCAGGALSTGTIIER 386 (387)
T ss_pred -----CCCeEEEEEccccCceeEEEEEe
Confidence 12566777777789999999985
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.4e-15 Score=175.24 Aligned_cols=250 Identities=14% Similarity=0.139 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
..|+.+++.+||+|||+++++++ +|++|.....+ .+ .+.....++..+|+.+ |+++|+.+|+|
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID----~vv~~~~~~~~----------~g--~~~~~~~~~~~lGl~~~~~~~v~~~~aS 101 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADID----GSVASYFSDHF----------QR--QLLAGIMVQDYLGLVPKPSKRIEGGGAT 101 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEecccccc----------cc--cchhhHHHHHhcCCCCCceEEEeCCcHH
Confidence 47889999999999999998887 56665322110 01 1222334678899986 99999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHH-HHH-HHHh----------cCCC------------------C------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPE-AYI-AMTS----------AGML------------------S------ 841 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~-~~~-~~~~----------~g~l------------------s------ 841 (1152)
++.||+.|++.|++|+||++||+|++.+.... ... .+.. .+.. +
T Consensus 102 g~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry~~~yG~t~e~la~ 181 (430)
T PRK06365 102 GGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRHMYEFGTTVEQLAK 181 (430)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 99999999999999999999999999643311 000 0000 0110 0
Q ss_pred ------CCCCcccCCCC---------------------CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCC
Q psy616 842 ------PDGKCYVFDER---------------------ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGK 894 (1152)
Q Consensus 842 ------~~g~~~~Fd~~---------------------a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~ 894 (1152)
......||... .|--.+++|++++||.+.+.|.+-+++. ..|+|.+..+++.
T Consensus 182 vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~p-v~i~g~g~~~~~~ 260 (430)
T PRK06365 182 VSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKP-VLIKAIGTGSDTL 260 (430)
T ss_pred HHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCC-eEEEEEEEecccc
Confidence 00001111111 1112247899999999999998766554 4456666655542
Q ss_pred CCCC--------------------C---CCCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHH-
Q psy616 895 TNGI--------------------T---APNGISQTELIKSVYKKSNLN--PEDINYIITHGTGTKLGDPVEINALHDV- 948 (1152)
Q Consensus 895 ~~~~--------------------~---~P~~~~q~~~i~~al~~Agi~--p~dI~yve~hgtgT~~gD~~E~~al~~~- 948 (1152)
.... . .........+++++|++||++ ++|||++|.|..-|. .|+..+...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~----~~l~~lE~lG 336 (430)
T PRK06365 261 RLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTS----SEIQTYEDLG 336 (430)
T ss_pred ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcH----HHHHHHHHcC
Confidence 2100 0 112334568999999999997 799999999998776 455444432
Q ss_pred hccc-----------CCCCCceee---eccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 949 FKNK-----------TYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 949 f~~~-----------~~~~~~~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
|+.. ......++| |..++. ||+.+|+|+..++.++.+|+..
T Consensus 337 l~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~-Ghp~GatG~~~~~e~~~QLrG~ 391 (430)
T PRK06365 337 LCKYGEGGQFIESGKPELPGKLPVNPSGGLLAA-GHAVGATGIMQAVFMFWQLQGR 391 (430)
T ss_pred CCCCCchHHHHHCCCcCCCCCccccCCCchhcC-CCcccHHHHHHHHHHHHHHhcc
Confidence 2221 111122333 666765 9999999999999999999985
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.1e-15 Score=172.67 Aligned_cols=249 Identities=15% Similarity=0.166 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
..|+.+++++||+|||+++++++ +|++|.....+.. + .....++..+|+.+ |+++|+++|+|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID----~v~vg~~~~~~~~---------~----~~~~~~a~~lGl~~~~~~~v~~~c~s 90 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDID----AAWFGTHYDEIGS---------G----KSGTPLSRALRLPNIPVTRVENFCAT 90 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc---------c----chhHHHHHHcCCCCCCEEEEecccHH
Confidence 57889999999999999999888 7888864321100 0 11245777899987 88899999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHH--H-----HHHhc-CCCC---------------------------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMIS-PEAY--I-----AMTSA-GMLS--------------------------- 841 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~--~-----~~~~~-g~ls--------------------------- 841 (1152)
++.||++|+++|++|+||++||+|++.+.. |... . .+... +.++
T Consensus 91 g~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~yG~t~e~~~~~~ 170 (398)
T PRK06157 91 GSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKYGVSREDLKRAM 170 (398)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHhCCCHHHHcccc
Confidence 999999999999999999999999986422 1000 0 00000 0000
Q ss_pred --------------CCCC------------cc----cCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEec
Q psy616 842 --------------PDGK------------CY----VFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINY 891 (1152)
Q Consensus 842 --------------~~g~------------~~----~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~ 891 (1152)
|+-. .+ |+ ..-|--.+++|++++||.+.+.|.+-++...+.|+|++..+
T Consensus 171 a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl-~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~ 249 (398)
T PRK06157 171 AHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPL-GLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAV 249 (398)
T ss_pred cHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCC-chhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEec
Confidence 1100 00 11 01133336899999999999999887765678999998765
Q ss_pred CCCCC----CCCCCCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHH-hccc-----------C
Q psy616 892 DGKTN----GITAPNGISQTELIKSVYKKSNLN--PEDINYIITHGTGTKLGDPVEINALHDV-FKNK-----------T 953 (1152)
Q Consensus 892 dG~~~----~~~~P~~~~q~~~i~~al~~Agi~--p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~-----------~ 953 (1152)
+.... +...........+.+++|++|||+ ++|||++|.|..-|. .|+..+... |+.. .
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~----~~l~~~e~lGl~~~Ge~~~~~~~g~~ 325 (398)
T PRK06157 250 SNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCFSI----TELVTMEDLGLSERGQAWRDVLDGFF 325 (398)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChH----HHHHHHHHcCCCCCCchHHHHHCCCc
Confidence 53211 111111223456899999999998 799999999998876 455444433 2221 1
Q ss_pred CCCCceee---eccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 954 YNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 954 ~~~~~~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
.....++| |..++. ||+.+|+|+..++.++.+|+..
T Consensus 326 ~~~G~~pvN~~GG~la~-Ghp~gatG~~~~~e~~~QLrg~ 364 (398)
T PRK06157 326 DADGGLPCQIDGGLKCF-GHPIGASGLRMLYEMYLQLLGR 364 (398)
T ss_pred cCCCCeeecCCCCcccC-CCcccHhHHHHHHHHHHHhccc
Confidence 11222344 666766 9999999999999999999874
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.6e-15 Score=175.30 Aligned_cols=281 Identities=17% Similarity=0.200 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
..|+.+++.+||+|||+++++++ .+++|....... .....+..++..+|+++ |.++|+++|+|
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId----~vi~~~~~~~~~------------~~~~~a~~va~~lG~~~~~~~~v~~~Cas 87 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQ----LVVGADTIRNGY------------PGFVAGATFAQALGWNGAPVSSSYAACAS 87 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCcc------------CCccHHHHHHHHhCCCCCceecccchhHH
Confidence 56789999999999999887776 566664332110 01123467888999998 89999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcC----HHHH-----HHHHh---cCCC-------------------------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMIS----PEAY-----IAMTS---AGML------------------------- 840 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~----~~~~-----~~~~~---~g~l------------------------- 840 (1152)
++.||++|++.|++|++|.+||+|++.+.. +... ..+.. .|+.
T Consensus 88 g~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s~e~~a~ 167 (399)
T PRK06059 88 GSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGATVEDFAQ 167 (399)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 999999999999999999999999986432 1000 00000 1110
Q ss_pred -----------CCCCCcc-cCC--------------CCCCCcccccccEEEEEcccchhhcC--CCceEEEEEEEEEecC
Q psy616 841 -----------SPDGKCY-VFD--------------ERANGLVPSEAVVAVVLKRLSRALSD--GDPIHAIIRGSGINYD 892 (1152)
Q Consensus 841 -----------s~~g~~~-~Fd--------------~~a~G~v~gEG~~~vvLk~l~~A~~d--gd~i~avI~g~a~~~d 892 (1152)
.|+-..| |.+ ..-|--.+++|++++||.+.+.|.+- |.+..++|+|++...+
T Consensus 168 v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~ 247 (399)
T PRK06059 168 VKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTP 247 (399)
T ss_pred HHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecc
Confidence 0110000 000 01123335799999999999988876 5556688999876543
Q ss_pred CCC------CCCC--------CCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccc-----
Q psy616 893 GKT------NGIT--------APNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK----- 952 (1152)
Q Consensus 893 G~~------~~~~--------~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~----- 952 (1152)
... ..+. +|+....+.+.+++|++||++|+|||++|.|..-|. .|+..+... |+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~----~~l~~~e~lGl~~~G~~~~ 323 (399)
T PRK06059 248 RYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTA----LELDWYEHLGLCPKGEAEA 323 (399)
T ss_pred cccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChH----HHHHHHHHcCCCCCCcHHH
Confidence 221 1121 122223457899999999999999999999999776 455444332 1211
Q ss_pred ------CCCCCceee---eccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccc
Q psy616 953 ------TYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNT 1023 (1152)
Q Consensus 953 ------~~~~~~~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~ 1023 (1152)
......++| |..++. ||+.+|+|+..++.++++|+..-=..+ .
T Consensus 324 ~~~~G~~~~~G~~pvN~~GG~la~-Ghp~gatG~~~~~e~~~qLrg~ag~~Q---------------------------v 375 (399)
T PRK06059 324 LLRSGATTLGGRIPVNPSGGLACF-GEAIPAQAIAQVCELTWQLRGQAGGRQ---------------------------V 375 (399)
T ss_pred HHHCCCccCCCCeeecCCCccccC-CccCCccHHHHHHHHHHHhccCcCCcc---------------------------C
Confidence 111122344 777776 999999999999999999987321110 0
Q ss_pred cCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1024 VNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1024 ~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
...+++++++.|.+|..+.+|||.
T Consensus 376 --~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 376 --EGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred --CCccEEEEeccCCcccceEEEecC
Confidence 124677888888889999999873
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.7e-15 Score=176.86 Aligned_cols=268 Identities=17% Similarity=0.181 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
..|+.+++.+||+|+|+++++++ .|++|..... +. ...++..++...|+. -|+++|+.+|+
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID----~vi~G~~~~~------------~~-~~~~ar~~a~~aGl~~~~P~~tV~~aCa 92 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIE----QLVFGQVVQM------------PE-APNIAREIVLGTGMNVHTDAYSVSRACA 92 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCC------------CC-ccHHHHHHHHHCCCCCCCcceeehhhhH
Confidence 45678999999999999998887 7889864321 00 122455588999996 59999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHH--H-----------------H---HHh----------cCC-----
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAY--I-----------------A---MTS----------AGM----- 839 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~--~-----------------~---~~~----------~g~----- 839 (1152)
||+.|++.|++.|++|++|++||||++.+...... . . +.. .++
T Consensus 93 SG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (428)
T PRK08963 93 TSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYST 172 (428)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccccCcccccccC
Confidence 99999999999999999999999999865321100 0 0 000 000
Q ss_pred ----------------CC-------------------CCCCc---------ccCC-------------------------
Q psy616 840 ----------------LS-------------------PDGKC---------YVFD------------------------- 850 (1152)
Q Consensus 840 ----------------ls-------------------~~g~~---------~~Fd------------------------- 850 (1152)
++ .+|.- .|+.
T Consensus 173 ~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r~~~t~e~~~~~~~v~ 252 (428)
T PRK08963 173 GLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDSTLEDYAKLRPAF 252 (428)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCCCCCCHHHHhcCCccc
Confidence 00 00100 0111
Q ss_pred -------CCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEec-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy616 851 -------ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPE 922 (1152)
Q Consensus 851 -------~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~-dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~ 922 (1152)
...|-..+++|++++||.+.+.|.+.|+++.+.|+|++... +.... ...+-..+++++|++||++|+
T Consensus 253 ~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~-----~~~~~~~a~~~al~~AGl~~~ 327 (428)
T PRK08963 253 DRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQD-----MLLGPAYATPLALERAGLTLA 327 (428)
T ss_pred cCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhh-----hhhHHHHHHHHHHHHcCCCHH
Confidence 00112224899999999999999999999999999988654 11111 012335789999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHH----h-----ccc-----CCCCCceeeeccCCCCCccccchhhHHHHHHHHhhh
Q psy616 923 DINYIITHGTGTKLGDPVEINALHDV----F-----KNK-----TYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIK 988 (1152)
Q Consensus 923 dI~yve~hgtgT~~gD~~E~~al~~~----f-----~~~-----~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~ 988 (1152)
|||++|.|...+. .|+..+... | +.. ....+.-+-|..++. ||+.+|+|+..++.++.+|+
T Consensus 328 DiD~~Ei~d~Fa~----~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~-GhP~gasG~~~~~e~~~qLr 402 (428)
T PRK08963 328 DLTLIDMHEAFAA----QTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAY-GHPFAATGARMITQTLHELR 402 (428)
T ss_pred HCCEEEEccccHH----HHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhc-CCCccccHHHHHHHHHHHHh
Confidence 9999999988874 444433332 1 100 000111233666665 99999999999999999998
Q ss_pred cCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 989 YKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 989 ~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
.+ ..++++++..+-||....+|||.
T Consensus 403 g~------------------------------------~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 403 RR------------------------------------GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred hc------------------------------------CCCEEEEEEccccChhhEEEEEe
Confidence 61 11457788888899999999874
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.1e-15 Score=175.51 Aligned_cols=221 Identities=17% Similarity=0.240 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccccccchh
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 797 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCsS 797 (1152)
...++.+++.+||++||+++++++ .+++++...++. . ...+.+++..+|+++|++.+..+|+|
T Consensus 95 ~~~la~~Aa~~aL~~agl~~~~Id----~li~~~~~~~~~--------~-----p~~a~~v~~~Lgl~~~~~~v~~aCas 157 (372)
T PRK07515 95 QAEMGVAAARQALARAGRTAEDID----AVIVACSNMQRA--------Y-----PAMAIEIQQALGIEGFAFDMNVACSS 157 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC--------C-----cHHHHHHHHhcCCCCcEEEecchhHH
Confidence 356899999999999999988876 577775432211 1 11356789999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCC
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 877 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dg 877 (1152)
++.||..|++.|++|.+|.+||+|++.+... + -|+....++++|||++++||++.+++.+++
T Consensus 158 g~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-------~~~d~~~~~lfGDgAaA~vL~~~~~~~~~~ 219 (372)
T PRK07515 158 ATFGIQTAANAIRSGSARRVLVVNPEICSGH-----------L-------NFRDRDSHFIFGDVATAVIVERADTATSAG 219 (372)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEeeeccccc-----------c-------cccCCCCCEEecCccEEEEEeeccccccCC
Confidence 9999999999999999999999999873211 1 123334689999999999999877664333
Q ss_pred -CceEEEEEEEEEec-----CCCC-----CCCCCC------CHHH--------HHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 878 -DPIHAIIRGSGINY-----DGKT-----NGITAP------NGIS--------QTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 878 -d~i~avI~g~a~~~-----dG~~-----~~~~~P------~~~~--------q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
..|++....+...+ .|.. .+...+ ++.. ..++|+++|+++|++++||+|+-+|.+
T Consensus 220 ~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~ 299 (372)
T PRK07515 220 GFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQA 299 (372)
T ss_pred CceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC
Confidence 25655542210000 1110 011111 2222 468899999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHH
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSL 980 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~l 980 (1152)
++.+.|.+ ++++|+....... .+ .+=...||+.+|+=...|
T Consensus 300 ~~~~~d~~----~~~llg~~~~~~~-~~--~~~~~~GNt~sasi~~~L 340 (372)
T PRK07515 300 NINMNQLI----GKKVLGRDATPEE-AP--VILDEYANTSSAGSIIAF 340 (372)
T ss_pred CHHHHHHH----HHHhccCCCChhh-ce--EeHHhcCCchhhHHHHHH
Confidence 99988876 3344542221111 12 123567999988754444
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.4e-15 Score=174.22 Aligned_cols=250 Identities=15% Similarity=0.133 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
.-|+.+++..||+|||+++++++ ++++++. .+++. +. ...+..++..+|+++ |++.|+++|+|
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID----~iv~~~~-~~~~~---------~~--~~~~~~va~~LGl~~~~~~~v~~~cas 88 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDID----AVVVGKA-PDFFE---------GV--MMPELFLADALGATGKPLIRVHTAGSV 88 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecc-ccccc---------cc--cCchHHHHHhcCCCCCceEEEeccCHH
Confidence 45889999999999999998887 7777752 22111 00 112246889999986 88999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHH---------------------HHHH-----HHhcCCCC----------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPE---------------------AYIA-----MTSAGMLS---------- 841 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~---------------------~~~~-----~~~~g~ls---------- 841 (1152)
+..+++.|++.|++|++|.+||.|++.+.+.. .+-. +.+.|...
T Consensus 89 g~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~ 168 (386)
T PRK08313 89 GGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKD 168 (386)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 99999999999999999999999987542210 0000 11122211
Q ss_pred -CCCCcccCCC----------------------CCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCC-
Q psy616 842 -PDGKCYVFDE----------------------RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNG- 897 (1152)
Q Consensus 842 -~~g~~~~Fd~----------------------~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~- 897 (1152)
..+.-.|+.. --|-...++|++++||-+.+.|.+-+.+..+.|+|++..+|.....
T Consensus 169 ~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~ 248 (386)
T PRK08313 169 RLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAG 248 (386)
T ss_pred HHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCccccc
Confidence 0111122111 1233335899999999999999877777778999998876643211
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHH-hccc-----------CCCCCceee--
Q psy616 898 ITAPNGISQTELIKSVYKKSNLN--PEDINYIITHGTGTKLGDPVEINALHDV-FKNK-----------TYNQKFCAI-- 961 (1152)
Q Consensus 898 ~~~P~~~~q~~~i~~al~~Agi~--p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~-----------~~~~~~~~i-- 961 (1152)
.......+...++++||++||++ ++|||++|.|..-|. .|+-.+... |+.. ......+||
T Consensus 249 ~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~----~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~ 324 (386)
T PRK08313 249 RDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSW----FEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNP 324 (386)
T ss_pred ccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChH----HHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccC
Confidence 11122356678999999999997 699999999999876 444444333 2211 112223455
Q ss_pred -eccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 962 -TSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 962 -gsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
|..|+ ||..+|+|+..++.++++|+..
T Consensus 325 ~GG~l~--g~p~gatG~~~~~e~~~qlrG~ 352 (386)
T PRK08313 325 SGGVLS--SNPIGASGMIRFAEAALQVMGK 352 (386)
T ss_pred CCcccc--cCCCcHHHHHHHHHHHHHhccc
Confidence 77787 9999999999999999999984
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.8e-15 Score=172.47 Aligned_cols=245 Identities=19% Similarity=0.172 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
..|+.|++.+||+|||+++.+++ +++.+ +.. . +. ....++..+|+++ |...++++|+|
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID----~~~~~---~~~-~---------~~----~~~~~~~~lGl~~~~~~~v~~gg~s 84 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVD----GYFCA---GDA-P---------GL----GPASMVDYLGLKLRHVDSTETGGSS 84 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEc---CCC-C---------Cc----cHHHHHHhCCCCCeeeccccCCcHH
Confidence 56889999999999999988887 44431 110 0 00 0134888999976 88899999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCH---HH---HH-------HHH-hcCCCC----------------------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISP---EA---YI-------AMT-SAGMLS---------------------- 841 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~---~~---~~-------~~~-~~g~ls---------------------- 841 (1152)
+..+++.|+++|++|+||++||.|++...+. .. .. .+. ..|+..
T Consensus 85 ~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~l 164 (388)
T PRK08142 85 YLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQL 164 (388)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHH
Confidence 9999999999999999999999888863211 00 00 000 011110
Q ss_pred --------CCCCcccCCC---------------------CCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecC
Q psy616 842 --------PDGKCYVFDE---------------------RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYD 892 (1152)
Q Consensus 842 --------~~g~~~~Fd~---------------------~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~d 892 (1152)
..+.-.|+.. .-|...+++|++++||.+.+.|.+-+ +..+.|+|++..++
T Consensus 165 a~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~-~~~v~I~g~~~~~~ 243 (388)
T PRK08142 165 AWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLK-RPLVKVLGAGEAIK 243 (388)
T ss_pred HHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcC-CCCEEEEEEEEecC
Confidence 0001111110 11334468999999999999998765 45689999998877
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccc-----------CCC-CCce
Q psy616 893 GKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK-----------TYN-QKFC 959 (1152)
Q Consensus 893 G~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~-----------~~~-~~~~ 959 (1152)
................+++++|++||++|+|||++|.|..-|. .|+-.+... |+.. ... ...+
T Consensus 244 ~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~----~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~l 319 (388)
T PRK08142 244 GQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTI----TVLMQLEDLGFCKKGEGGKFVADGNLISGVGKL 319 (388)
T ss_pred CccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchH----HHHHHHHHcCCCCCCchHHHHHCCCcccCCCCc
Confidence 5432211122344567999999999999999999999998886 455444433 3221 111 1346
Q ss_pred ee---eccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 960 AI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 960 ~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
|| |..|++ ||+.+|+|+..++.++.||+..
T Consensus 320 PvN~sGG~l~~-G~p~gatG~~~~~E~~~QLrG~ 352 (388)
T PRK08142 320 PFNTDGGGLCN-NHPANRGGMTKVIEAVRQLRGE 352 (388)
T ss_pred cccCCChhhcC-CCcCcccHHHHHHHHHHHHcCC
Confidence 77 889998 9999999999999999999873
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.6e-15 Score=171.31 Aligned_cols=250 Identities=14% Similarity=0.104 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCcccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs~tvdtaCsS 797 (1152)
..|+.+++.+||+|||+++++++ ++++|.. .+.. .+ ....+..++..+|+. .|++.|+++|+|
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID----~~i~~~~-~~~~---------~~--~~~~a~~l~~~lG~~~~~~~~V~~~gas 93 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDID----CVVIGSA-PDAF---------DG--VHMKGEYLSHGSGGIRKPVSRVYVGGAT 93 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecc-CCcc---------cc--cccHHHHHHHHcCCCCCCeEEEecCchh
Confidence 56889999999999999998887 7787742 1111 00 123455688888887 699999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCH----HHHHH------HH-hcCCC------------------C-------
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISP----EAYIA------MT-SAGML------------------S------- 841 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~----~~~~~------~~-~~g~l------------------s------- 841 (1152)
+..|+..|+++|++|.+|.+||.|++.+... ..... +. ..|+. +
T Consensus 94 G~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~v 173 (392)
T PRK06065 94 GVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALV 173 (392)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 9999999999999999999999998863211 00000 00 00100 0
Q ss_pred -----CCCCcccCCCC---------------------CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCC
Q psy616 842 -----PDGKCYVFDER---------------------ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKT 895 (1152)
Q Consensus 842 -----~~g~~~~Fd~~---------------------a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~ 895 (1152)
..+.-.|+..- -|--.+++|++++||-+.+.|.+-+++. ..|+|++..++...
T Consensus 174 av~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~~~~~~~ 252 (392)
T PRK06065 174 SVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP-VWVEGVGWTLDNTE 252 (392)
T ss_pred HHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCccc
Confidence 00111111111 0222358999999999999998777554 44899887665432
Q ss_pred CCCC-CCCHHHHHHHHHHHHHHcCCCC--CCccEEEecCCCCCCCCHHHHHHHHHH-hcc-----------cCCCCCcee
Q psy616 896 NGIT-APNGISQTELIKSVYKKSNLNP--EDINYIITHGTGTKLGDPVEINALHDV-FKN-----------KTYNQKFCA 960 (1152)
Q Consensus 896 ~~~~-~P~~~~q~~~i~~al~~Agi~p--~dI~yve~hgtgT~~gD~~E~~al~~~-f~~-----------~~~~~~~~~ 960 (1152)
.... .....+...+.+++|++||+++ +|||++|.|..-|. .|+-.+... |+. .......+|
T Consensus 253 ~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~----~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~p 328 (392)
T PRK06065 253 WPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDY----KELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIP 328 (392)
T ss_pred cccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChH----HHHHHHHHcCCCCCCcHHHHHHCCCccCCCCee
Confidence 1111 1123445689999999999985 99999999999875 444333322 111 111122234
Q ss_pred e---eccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 961 I---TSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 961 i---gsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
| |..++. ||+.+|+|+..++.++.||+..
T Consensus 329 vN~~GG~la~-Ghp~gatG~~~~~e~~~QLrg~ 360 (392)
T PRK06065 329 SSPSGGLLGV-GNPIAAAGLMKVISIYWQLKGT 360 (392)
T ss_pred ecCCCccccC-CCCccHHHHHHHHHHHHHHhcc
Confidence 4 777777 9999999999999999999874
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.6e-15 Score=173.44 Aligned_cols=265 Identities=17% Similarity=0.212 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCs 796 (1152)
..|+.+++.+||+|||+++++++ +|++|...... ... .++..++..+|+.. |.++|+++|+
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID----~vi~g~~~~~~------------~~~-~~a~~~~~~~Gl~~~~p~~~v~~~ca 89 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQ----EVIMGNVIQAG------------VGQ-NPAGQAAYHAGLPFGVTKYTVNVVCA 89 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCC------------ccC-cHHHHHHHHCCCCCCCcceeeechhh
Confidence 56889999999999999999988 88888643211 001 12455788899975 9999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-H-----H---H--H--------HH-HHhcCCC----------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-P-----E---A--Y--------IA-MTSAGML---------------- 840 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~-----~---~--~--------~~-~~~~g~l---------------- 840 (1152)
||+.|+.+|+++|++|+||++||||++.+.. | . . + .. +...++.
T Consensus 90 Sg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal~A~~~~ 169 (388)
T PRK06366 90 SGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTA 169 (388)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccHHHHHHHHH
Confidence 9999999999999999999999999876331 1 0 0 0 00 0001110
Q ss_pred -----------------------CCC-CCcc----cC------------C----------CCCCCcc-------cccccE
Q psy616 841 -----------------------SPD-GKCY----VF------------D----------ERANGLV-------PSEAVV 863 (1152)
Q Consensus 841 -----------------------s~~-g~~~----~F------------d----------~~a~G~v-------~gEG~~ 863 (1152)
.|+ |+.+ || + .+.+|.+ +++|++
T Consensus 170 ~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g~lt~~d~s~~sDGAa 249 (388)
T PRK06366 170 RKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNGILTAGNSAQLSDGGS 249 (388)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCCCEehhhcCCccccee
Confidence 022 2221 01 0 0112322 489999
Q ss_pred EEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy616 864 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 943 (1152)
Q Consensus 864 ~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~ 943 (1152)
++||.+.+.|.+-+.+..+.|+|++........ +.. .-..+++++|++||++|+|||++|.|...|. .|+-
T Consensus 250 Avvl~See~A~~l~~~pv~~I~g~~~~~~~~~~-~~~----~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~----~~l~ 320 (388)
T PRK06366 250 ALVMASEKAINEYGLKPIARITGYESASLDPLD-FVE----APIPATRKLLEKQNKSIDYYDLVEHNEAFSI----ASII 320 (388)
T ss_pred EEEEecHHHHHHcCCCcCEEEEEEEEEecCHHH-hcc----cHHHHHHHHHHHcCCCHHHcceeeccchhHH----HHHH
Confidence 999999999998888888899999887543211 111 1258999999999999999999999988776 5555
Q ss_pred HHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccc
Q psy616 944 ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNT 1023 (1152)
Q Consensus 944 al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~ 1023 (1152)
.++.. +-.. .+.-+-|..++. ||+.+|+|+..++..+.+|+.+
T Consensus 321 ~le~l-gl~g--~~vN~~GG~la~-GHP~GatG~~~~~~l~~qL~~~--------------------------------- 363 (388)
T PRK06366 321 VRDQL-KIDN--ERFNVNGGAVAI-GHPIGNSGSRIIVTLINALKTR--------------------------------- 363 (388)
T ss_pred HHHHh-CCCC--CccCCCCchhhh-CCCcCCCHHHHHHHHHHHHHhc---------------------------------
Confidence 55543 2111 122345777776 9999999999999999999861
Q ss_pred cCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1024 VNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1024 ~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..|++.++..+-||.-..+|||.
T Consensus 364 ---~~~~g~~~~c~~gg~g~a~~~e~ 386 (388)
T PRK06366 364 ---HMKTGLATLCHGGGGAHTLTLEM 386 (388)
T ss_pred ---CCCeEEEEEecccChhhEEEEEe
Confidence 12566666667788888888874
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.7e-14 Score=171.26 Aligned_cols=268 Identities=15% Similarity=0.210 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
..|..+++.+||+|||+++++++ +|++|+..... . ...++..++..+|+. -|.++|+++|+
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID----~vi~g~~~~~~------------~-~~~~a~~v~~~lGl~~~~p~~~v~~~Ca 90 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLD----EVILGCAMPSP------------D-EANIARVVALRLGCGEKVPAWTVQRNCA 90 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCC------------C-cChHHHHHHHHhCcCCCceeeeccchhh
Confidence 56788999999999999998888 88888653210 0 012455678899995 49999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH---H------------------H-------HHHHh------cCCC-
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---A------------------Y-------IAMTS------AGML- 840 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~---~------------------~-------~~~~~------~g~l- 840 (1152)
|++.|++.|+++|++|++|.+||+|++.+.. |. . + ..+.. .|+.
T Consensus 91 Sg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 170 (426)
T PRK08170 91 SGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTD 170 (426)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccccccccCccccc
Confidence 9999999999999999999999999985322 11 0 0 00000 0100
Q ss_pred --------------------C------------CC-------CCc-----------ccCCC-------------------
Q psy616 841 --------------------S------------PD-------GKC-----------YVFDE------------------- 851 (1152)
Q Consensus 841 --------------------s------------~~-------g~~-----------~~Fd~------------------- 851 (1152)
+ .. |.- .|++.
T Consensus 171 ~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~r~~~t~e~~~~~~~v 250 (426)
T PRK08170 171 PVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGVRPDSSMEKLAKLKPF 250 (426)
T ss_pred cccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCCCCCCCHHHHhcCCCc
Confidence 0 00 000 11111
Q ss_pred ---C------CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy616 852 ---R------ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPE 922 (1152)
Q Consensus 852 ---~------a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~ 922 (1152)
. .|--.+++|++++||.+.+.|.+.+.++.+.|.+++....... .+ ..+...+++++|++|||+|+
T Consensus 251 ~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~--~~---~~~~~~a~~~al~~aGl~~~ 325 (426)
T PRK08170 251 FDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPS--QM---GLGPVHAATPLLQRHGLTLE 325 (426)
T ss_pred ccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCch--hh---cccHHHHHHHHHHHcCCCHH
Confidence 0 2223358999999999999999999888889999876543211 11 12346899999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHH----hccc----------CCCCCceeeeccCCCCCccccchhhHHHHHHHHhhh
Q psy616 923 DINYIITHGTGTKLGDPVEINALHDV----FKNK----------TYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIK 988 (1152)
Q Consensus 923 dI~yve~hgtgT~~gD~~E~~al~~~----f~~~----------~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~ 988 (1152)
|||++|.|...|. .|+..+... |+.. ....+..+-|..++. ||+.+|+|+..++..+.+|+
T Consensus 326 did~~ei~daFa~----~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~-GHP~GAtG~~~~~~l~~~l~ 400 (426)
T PRK08170 326 DLDLWEINEAFAA----QVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIAL-GHPVGASGARIVLHLLHALK 400 (426)
T ss_pred HcCEEEecchhHH----HHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHh-CCCccCccHHHHHHHHHHHH
Confidence 9999999987765 344222211 2111 111112233666665 99999999999999999887
Q ss_pred cCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 989 YKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 989 ~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
.. ..|++.++...-||.-..+|||.
T Consensus 401 ~~------------------------------------~~~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 401 RR------------------------------------GTKRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred hh------------------------------------CCCeEEEEEecCCChhheEEEEe
Confidence 61 12567777777889999999884
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.3e-14 Score=166.26 Aligned_cols=269 Identities=19% Similarity=0.181 Sum_probs=178.1
Q ss_pred cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccc
Q psy616 714 RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAI 791 (1152)
Q Consensus 714 ~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tv 791 (1152)
.++| ..|..++..+||+|+|+++++++ .|++|.......+ + .+ ++-.+.-.-|| .=|.++|
T Consensus 23 ~~~~-~~L~~~a~~~al~~a~l~~~~Id----~vi~G~~~~~~~~---------~--~~-~ar~~~l~~gl~~~vP~~tV 85 (390)
T PRK06504 23 GWHP-ADLAAQVLDALVDRSGADPALIE----DVIMGCVSQVGEQ---------A--TN-VARNAVLASKLPESVPGTSI 85 (390)
T ss_pred CCCH-HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc---------c--cc-HHHHHHHHcCCCCCCceEEE
Confidence 4445 56788999999999999998887 7888854311000 0 01 11111222244 5699999
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHHH---------------HHHh--c--CC------------
Q psy616 792 NTACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI---------------AMTS--A--GM------------ 839 (1152)
Q Consensus 792 dtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~~---------------~~~~--~--g~------------ 839 (1152)
+.+|+||+.|++.|++.|++|++|++||||++.+.. |.... .+.. . +.
T Consensus 86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae~~a~~ 165 (390)
T PRK06504 86 DRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKK 165 (390)
T ss_pred echhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999996532 21000 0000 0 00
Q ss_pred --CC-------------------CCC-------------------------------------CcccCCC-----CCCCc
Q psy616 840 --LS-------------------PDG-------------------------------------KCYVFDE-----RANGL 856 (1152)
Q Consensus 840 --ls-------------------~~g-------------------------------------~~~~Fd~-----~a~G~ 856 (1152)
++ ..| +.+|... ..|--
T Consensus 166 ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~g~lt~~n~s 245 (390)
T PRK06504 166 YGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEGGRLTAATAS 245 (390)
T ss_pred hCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCCCCCcCccCC
Confidence 00 001 0111210 01223
Q ss_pred ccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy616 857 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 936 (1152)
Q Consensus 857 v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~ 936 (1152)
.+++|++++||.+.+.|.+-+++..+.|++++...+-.... ..+-..+++++|++||++|+|||++|.|...|.
T Consensus 246 ~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~-----~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~- 319 (390)
T PRK06504 246 QICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIM-----LEAPLPATERALKKAGMKIDDIDLYEVNEAFAS- 319 (390)
T ss_pred CCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhh-----hccHHHHHHHHHHHcCCCHHHCCEEEecccchH-
Confidence 35799999999999999888877777788776544321111 123346899999999999999999999988876
Q ss_pred CCHHHHHHHHHH-hcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeec
Q psy616 937 GDPVEINALHDV-FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 1015 (1152)
Q Consensus 937 gD~~E~~al~~~-f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~ 1015 (1152)
.|+..+... |+.. +.-+-|..++. ||+.+|+|+..+...+.+|+..
T Consensus 320 ---~~l~~~e~lG~~~~----pvN~~GG~la~-Ghp~gatG~r~~~~l~~~lr~~------------------------- 366 (390)
T PRK06504 320 ---VPLAWLKATGADPE----RLNVNGGAIAL-GHPLGASGTKLMTTLVHALKQR------------------------- 366 (390)
T ss_pred ---HHHHHHHHhCCCCC----CcCCCCcHHhc-CCCcchhHHHHHHHHHHHHHhh-------------------------
Confidence 455444433 2221 11234666665 9999999988888888888751
Q ss_pred cccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1016 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1016 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..++++++..|.||..+.+|||.
T Consensus 367 -----------~~~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 367 -----------GKRYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred -----------CCCeEEEEEeecccceeEEEEEe
Confidence 12567777777788888888874
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.3e-14 Score=167.19 Aligned_cols=253 Identities=21% Similarity=0.201 Sum_probs=165.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
..|..+++.+||+|||+++++++ +|++|...+++... .... .. .+. ....++.| |+++|+++|+|
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID----~vi~g~~~~~~~~~---~~~~----~~-~~~--~~~~~~~g~~~~~v~~~Cas 92 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIE----VVHVGNFFGELFAG---QGHL----GA-MPA--TVHPALWGVPASRHEAACAS 92 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccccc---cccc----ch-HHH--HHhhcCCCCceeecccccHH
Confidence 56889999999999999999988 78888654432111 0000 01 111 12234444 89999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH--HHHH------Hhc------------CCC----------C-----
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMIS-PEA--YIAM------TSA------------GML----------S----- 841 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~--~~~~------~~~------------g~l----------s----- 841 (1152)
++.||+.|+.+|++|+||.+||+|++.+.. |.. ...+ ... ++. +
T Consensus 93 g~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la 172 (403)
T PRK06289 93 GSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLR 172 (403)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHH
Confidence 999999999999999999999999886322 110 0000 000 000 0
Q ss_pred -------------CCCCcc------cC---CCC-----------CCCcccccccEEEEEcccchhhcCCC-ceEEEEEEE
Q psy616 842 -------------PDGKCY------VF---DER-----------ANGLVPSEAVVAVVLKRLSRALSDGD-PIHAIIRGS 887 (1152)
Q Consensus 842 -------------~~g~~~------~F---d~~-----------a~G~v~gEG~~~vvLk~l~~A~~dgd-~i~avI~g~ 887 (1152)
|.-..+ +. |.. -|--.+++|++++||-+.+.|.+-++ +..+.|+|+
T Consensus 173 ~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~ 252 (403)
T PRK06289 173 AIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGW 252 (403)
T ss_pred HHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEE
Confidence 110111 00 000 11122479999999999999977665 567999999
Q ss_pred EEecCCCCCC------CCCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccc-------
Q psy616 888 GINYDGKTNG------ITAP-NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK------- 952 (1152)
Q Consensus 888 a~~~dG~~~~------~~~P-~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~------- 952 (1152)
+..++-.... ...| ....-..+.+++|++||++|+|||++|.|..-|. .|+-.+... |+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~----~~l~~le~lGl~~~Ge~~~~v 328 (403)
T PRK06289 253 GHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTP----SEYLAIDHIGLTGPGESWKAI 328 (403)
T ss_pred EEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchH----HHHHHHHHcCCCCCCcHHHHH
Confidence 8875532110 0011 1233457899999999999999999999999886 444444433 3321
Q ss_pred ----CCCCCceee---eccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 953 ----TYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 953 ----~~~~~~~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
......++| |..++. ||+.+|+|+..++.++.+|+..
T Consensus 329 ~~G~~~~~G~lpvN~~GG~la~-Ghp~gatG~~~~~e~~~QLrg~ 372 (403)
T PRK06289 329 ENGEIAIGGRLPINPSGGLIGG-GHPVGASGVRMLLDAAKQVTGT 372 (403)
T ss_pred hcCCcccCCCeeEcCCCCcccc-CCCccchHHHHHHHHHHHHhcc
Confidence 111222444 677776 9999999999999999999973
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.7e-14 Score=168.92 Aligned_cols=244 Identities=18% Similarity=0.219 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-C-Ccccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-G-PVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-G-Ps~tvdtaCs 796 (1152)
..|+.+++.+||+|+|+++++++ .|++|..... +. ...++..++...||. + |.++|+.+|+
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id----~vi~G~~~~~------------~~-~~~~ar~~~l~aGl~~~~p~~~V~~~Ca 94 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIE----QLVFGQVVQM------------PE-APNIAREIVLGTGMNVHTDAYSVTRACA 94 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCc------------Cc-cchHHHHHHHhCCCCCCCchhhhhhhhh
Confidence 46778999999999999998887 6888854321 00 112455555667886 3 9999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHHH----------------H----------HHh-c-----------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI----------------A----------MTS-A----------- 837 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~~----------------~----------~~~-~----------- 837 (1152)
||+.|+++|+++|++|++|++||||++.+.. |..+. . +.. .
T Consensus 95 SG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (430)
T TIGR02446 95 TSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYST 174 (430)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhcccCcccccccC
Confidence 9999999999999999999999999997642 21000 0 000 0
Q ss_pred CC--------------CC---------------C----CCCc---------cc--------------------------C
Q psy616 838 GM--------------LS---------------P----DGKC---------YV--------------------------F 849 (1152)
Q Consensus 838 g~--------------ls---------------~----~g~~---------~~--------------------------F 849 (1152)
++ ++ . +|+- .| |
T Consensus 175 ~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r~~~t~e~~~~~~~i~ 254 (430)
T TIGR02446 175 GLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIRHNSTLAGYAKLRPAF 254 (430)
T ss_pred CCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCCCCCCHHHHhcCCcee
Confidence 00 00 0 0000 11 1
Q ss_pred C------CCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy616 850 D------ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGK-TNGITAPNGISQTELIKSVYKKSNLNPE 922 (1152)
Q Consensus 850 d------~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~-~~~~~~P~~~~q~~~i~~al~~Agi~p~ 922 (1152)
+ ...|--.+++|++++||-+.+.|.+-+.+..+.|+|++....-. ......| ..+++++|++||++|+
T Consensus 255 ~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~-----~~a~~~al~~Agl~~~ 329 (430)
T TIGR02446 255 DRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGP-----SYATPLALQRAGLALS 329 (430)
T ss_pred cCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccH-----HHHHHHHHHHcCCCHH
Confidence 1 01223335899999999999999888888888999987652211 1111222 4688999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHH----hccc----------CCCCCceeeeccCCCCCccccchhhHHHHHHHHhhh
Q psy616 923 DINYIITHGTGTKLGDPVEINALHDV----FKNK----------TYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIK 988 (1152)
Q Consensus 923 dI~yve~hgtgT~~gD~~E~~al~~~----f~~~----------~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~ 988 (1152)
|||++|.|..-|. .|+..+... |... ....+..+-|..++. ||+.+|+|+..++.++.+|+
T Consensus 330 Did~~Ei~daFa~----~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~-GhP~gatG~~~v~e~~~qL~ 404 (430)
T TIGR02446 330 DLTLIDMHEAFAA----QTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAY-GHPFAATGARMITQTLRELK 404 (430)
T ss_pred HCCEEEeccccHH----HHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhc-CCCccccHHHHHHHHHHHHh
Confidence 9999999988776 555555443 2111 111122334777776 99999999999999999998
Q ss_pred c
Q psy616 989 Y 989 (1152)
Q Consensus 989 ~ 989 (1152)
.
T Consensus 405 g 405 (430)
T TIGR02446 405 R 405 (430)
T ss_pred h
Confidence 6
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.3e-15 Score=152.42 Aligned_cols=190 Identities=12% Similarity=0.066 Sum_probs=147.0
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEE-EecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLI-LSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vi-l~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+..++++|+||+++|||..++..+...+...++ ...|... +......+.|....+...|++....+.++++..++.+
T Consensus 3 ~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a--~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~ 80 (253)
T KOG1204|consen 3 LNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLA--ELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG 80 (253)
T ss_pred cccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccc--cccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence 346789999999999998888777766543222 2222221 1111112334445567788999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccc--cCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 312 GPIDGVLHIAGISGLTSNIL--EANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~--~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
|..|+||||||..++...+. ..+.++|++.++.|+.+...|.+.++|.+++.. ..+-+|++||.+++.+..++++|
T Consensus 81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p--~~~~vVnvSS~aav~p~~~wa~y 158 (253)
T KOG1204|consen 81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP--VNGNVVNVSSLAAVRPFSSWAAY 158 (253)
T ss_pred CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC--ccCeEEEecchhhhccccHHHHh
Confidence 99999999999988433343 678899999999999999999999999865431 24679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 430 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 430 (1152)
|.+|++.+.|.+.++.+.. ..++++++.+|..+ +-|.
T Consensus 159 c~~KaAr~m~f~~lA~EEp---~~v~vl~~aPGvvD-T~mq 195 (253)
T KOG1204|consen 159 CSSKAARNMYFMVLASEEP---FDVRVLNYAPGVVD-TQMQ 195 (253)
T ss_pred hhhHHHHHHHHHHHhhcCc---cceeEEEccCCccc-chhH
Confidence 9999999999999988731 47789999988874 4554
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-13 Score=158.96 Aligned_cols=274 Identities=14% Similarity=0.132 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHhcC-CCC-CCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCcccccccc
Q psy616 719 QRHLLQESWLALEDAG-YGP-NQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTAC 795 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG-~~~-~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs~tvdtaC 795 (1152)
..|+.|++++||+||| +++ ++++ |++++.. +.. ... .+....++..+++. .|.+.| |
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId----~~~~~~~--~~~----~~~-------~~~~~~~~~~lg~~~~~~~~v---~ 85 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVD----SFISCQE--DFW----EGI-------AIADEFAPDQIGGAMRPTMTV---A 85 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCC----EEEEecC--ccc----Ccc-------cccchhHHHHcccCCCCeEEE---e
Confidence 5689999999999999 986 6887 6766531 111 000 01112355778884 587776 8
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHH-HH---------hcCCCC------------------------
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIA-MT---------SAGMLS------------------------ 841 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~-~~---------~~g~ls------------------------ 841 (1152)
+|+..+++.|+++|++|+||.+||.|++.......+.. +. ..|+..
T Consensus 86 ~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA 165 (385)
T PRK06066 86 GDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLA 165 (385)
T ss_pred CcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 99999999999999999999999999874322000000 00 001000
Q ss_pred -------CCCCcccCCC---------------------CCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCC
Q psy616 842 -------PDGKCYVFDE---------------------RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDG 893 (1152)
Q Consensus 842 -------~~g~~~~Fd~---------------------~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG 893 (1152)
..+.-.|... ..|--.+++|++++||.+.+.|.+-+++.- .|+|++..++.
T Consensus 166 ~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~ 244 (385)
T PRK06066 166 LVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTES 244 (385)
T ss_pred HHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCC
Confidence 0000001000 012223589999999999999987776654 89988876553
Q ss_pred CCCCCCC-CCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHH-hccc-----------CCCCCc
Q psy616 894 KTNGITA-PNGISQTELIKSVYKKSNLN--PEDINYIITHGTGTKLGDPVEINALHDV-FKNK-----------TYNQKF 958 (1152)
Q Consensus 894 ~~~~~~~-P~~~~q~~~i~~al~~Agi~--p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~-----------~~~~~~ 958 (1152)
....... ........+.+++|++|||+ ++|||++|.|..-|. .|+-.+... |+.. +.....
T Consensus 245 ~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~----~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~ 320 (385)
T PRK06066 245 SNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSY----KELQHIEALRLSEEPEKDSLLREGNFDPQGE 320 (385)
T ss_pred cccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChH----HHHHHHHHcCCCCCCchHHHHHCCCCCCCCC
Confidence 2211111 12233346899999999997 699999999988876 444443332 2221 111222
Q ss_pred eee---eccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcC
Q psy616 959 CAI---TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSA 1035 (1152)
Q Consensus 959 ~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~s 1035 (1152)
+|| |..++. ||+.+|+|+..++.++.+|+..-=. .+ .+.+++++.+
T Consensus 321 ~PvN~~GG~la~-Ghp~gatG~~~v~e~~~QL~g~Ag~---------------------------rQ---~~a~~~l~~~ 369 (385)
T PRK06066 321 LPVNPSGGHLAK-GVPLEASGLSLLLDAVEYLRGEAGA---------------------------RQ---GKAERAVVAS 369 (385)
T ss_pred ccccCCCchhcC-CCccchhHHHHHHHHHHHHcccccc---------------------------cC---CCCcEEEEcC
Confidence 344 777777 9999999999999999999873100 00 1346777887
Q ss_pred cC--CCcceEEEEEc
Q psy616 1036 FG--MSGTNAHIVLQ 1048 (1152)
Q Consensus 1036 fG--~gG~nah~il~ 1048 (1152)
.| ++++.+-.|||
T Consensus 370 ~gg~~~~~~~v~v~~ 384 (385)
T PRK06066 370 WRGIPTLTGSVVVVE 384 (385)
T ss_pred CCccCCccEEEEEEe
Confidence 76 55666777776
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.55 E-value=8.2e-14 Score=163.76 Aligned_cols=249 Identities=17% Similarity=0.157 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHH-HHHHHcCCCC-Ccccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSA-RLAYFMDLKG-PVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~-ris~~~~l~G-Ps~tvdtaC 795 (1152)
-..+..+++.+||+|+|+++++++ .|++|+...++. + . .++. -+...+++.+ |+++|+++|
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID----~vi~g~~~~~~~----------g--~-~~~~~~~~~~lg~~~~p~~~V~~~C 85 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVE----EACLGQVLGAGE----------G--Q-NCAQQAAMHAGGLQEAPAIGMNNLC 85 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEccCCcc----------c--C-cHHHHHHHHcCCCCCCcEEEecchh
Confidence 345677888999999999998887 788887654321 0 0 1111 1456677776 999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH---------H---------------HH------HHhcCCCC---
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA---------Y---------------IA------MTSAGMLS--- 841 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~---------~---------------~~------~~~~g~ls--- 841 (1152)
+|++.|++.|++.|++|++|++||+|++.+.. +.. + .. +.+.|...
T Consensus 86 asg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~~~~~~~~G~~~e~~ 165 (393)
T cd00826 86 GSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDGRFKDEF 165 (393)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHHHHHHHHcCCCHHHE
Confidence 99999999999999999999999999886432 100 0 00 01112111
Q ss_pred -----CC--CC----cccCCCC-----------------CCCc-------ccccccEEEEEcccchhhcCCC-ceEEEEE
Q psy616 842 -----PD--GK----CYVFDER-----------------ANGL-------VPSEAVVAVVLKRLSRALSDGD-PIHAIIR 885 (1152)
Q Consensus 842 -----~~--g~----~~~Fd~~-----------------a~G~-------v~gEG~~~vvLk~l~~A~~dgd-~i~avI~ 885 (1152)
++ |+ -.|+... .++. .+++|++++||.+.+.|.+-|. .-...|+
T Consensus 166 a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~v~i~ 245 (393)
T cd00826 166 AKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQ 245 (393)
T ss_pred EEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHHHHHcCCcccccccc
Confidence 11 10 0121111 0122 2379999999999998987662 1113444
Q ss_pred EEEEecCCCCCCCCCC------CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hccc------
Q psy616 886 GSGINYDGKTNGITAP------NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNK------ 952 (1152)
Q Consensus 886 g~a~~~dG~~~~~~~P------~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~------ 952 (1152)
+.+...+..... ..| ...+...+++++|++|||+|+|||++|.|..-+. .|+..+... |+..
T Consensus 246 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~----~~l~~~e~lgl~~~g~~~~~ 320 (393)
T cd00826 246 ALEMITDMASTF-EDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAA----NACATNEALGLCPEGQGGAL 320 (393)
T ss_pred eEEEEEeeeccc-cCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHH----HHHHHHHHhCCCcccchhhh
Confidence 443332221100 011 1233478999999999999999999999977665 455444443 2221
Q ss_pred -----CCCCCceee---eccCCCCCccccchhhHHHHHHHHhhhc
Q psy616 953 -----TYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKY 989 (1152)
Q Consensus 953 -----~~~~~~~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~ 989 (1152)
......++| |..++. ||+.+|+|+..++.++.+|+.
T Consensus 321 ~~~g~~~~~G~~pvN~~GG~la~-GhP~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 321 VDRGDNTYGGKSIINPNGGAIAI-GHPIGASGAAICAELCFELKG 364 (393)
T ss_pred hhcCccccCCcceECCCCchhhc-CCCccccHHHHHHHHHHHHhh
Confidence 111112333 777777 999999999999999999986
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-13 Score=157.06 Aligned_cols=241 Identities=19% Similarity=0.208 Sum_probs=165.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCs 796 (1152)
...++.+++.+||+++|+.+++++ .|++|+...++. ....+.+|+..+|+.+ |.++|.++|+
T Consensus 52 ~~~la~~A~~~al~~agl~~~~id----~vi~~~~~~~~~-------------~~~~~~~i~~~lG~~~~~~~~v~~~Ca 114 (319)
T PRK09352 52 TSDLATEAAKKALEAAGIDPEDID----LIIVATTTPDYA-------------FPSTACLVQARLGAKNAAAFDLSAACS 114 (319)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CchHHHHHHHHhCCCCCcEeeccccch
Confidence 578899999999999999988876 677776543211 1124678999999988 9999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||..|++.|++|++|.+||+|++.+... +. ++....+++.|+|+++++|++..+.
T Consensus 115 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~-------~~~~~~~~~~gDGaaA~ll~~~~~~--- 173 (319)
T PRK09352 115 GFVYALSTADQFIRSGAYKNVLVIGAEKLSRI-----------VD-------WTDRSTCVLFGDGAGAVVLGASEEP--- 173 (319)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEehhhccc-----------cC-------cccCCceEEEeccceEEEEEEcCCC---
Confidence 99999999999999999999999999973211 11 1223357899999999999986542
Q ss_pred CCceEEEEEEEEEecCCCC-CCCCCCC-----------------------HHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 877 GDPIHAIIRGSGINYDGKT-NGITAPN-----------------------GISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~~-~~~~~P~-----------------------~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
.+ .++...++|.. ..++.|. .....++++++|+++|++++||+|+-.|..
T Consensus 174 --~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~ 247 (319)
T PRK09352 174 --GI----LSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDIDWLVPHQA 247 (319)
T ss_pred --Ce----EEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC
Confidence 22 23333333321 1111111 122456899999999999999999999976
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCe
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 1012 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 1012 (1152)
+... ...+.+.++-... .+ -.....+||+.+|+=+..|...+ +.|.+.+
T Consensus 248 ~~~~-----~~~~~~~lg~~~~---~~--~~~~~~~Gn~~~a~~~~~L~~~~---~~g~~~~------------------ 296 (319)
T PRK09352 248 NLRI-----IDATAKKLGLPME---KV--VVTVDKYGNTSAASIPLALDEAV---RDGRIKR------------------ 296 (319)
T ss_pred CHHH-----HHHHHHHhCCCHH---Hh--hhhHHhhCCHHHHHHHHHHHHHH---HcCCCCC------------------
Confidence 5432 2334444442211 11 12346799999988777775443 3332211
Q ss_pred eeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1013 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1013 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
-.+.++-|||.|-+-..++|+
T Consensus 297 ---------------Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 297 ---------------GDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred ---------------CCEEEEEEEchhheeEEEEEE
Confidence 134568889998888888875
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.9e-13 Score=160.29 Aligned_cols=274 Identities=17% Similarity=0.204 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHH--cCCCCCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYF--MDLKGPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~--~~l~GPs~tvdtaCs 796 (1152)
.-|..+++.+||+|+|+++++++ .|++|...... . ...++..++.. ++..+|+++|+++|+
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id----~vv~G~~~~~~------------~-~~~~~r~~~l~~gl~~~~p~~~V~~~Ca 94 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLG----EVVAGAVLKHS------------R-DFNLTRECVLGSALSPYTPAYDLQQACG 94 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCC------------c-cccHHHHHHHHcCCCCCCceeeeechhh
Confidence 45778999999999999988887 78888643210 0 01123333344 455789999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHHH------------------------HH---H-----------hc
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAYI------------------------AM---T-----------SA 837 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~~------------------------~~---~-----------~~ 837 (1152)
||+.|+.+|++.|++|++|++||||++.+.. |.... .+ . ..
T Consensus 95 SG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (427)
T PRK09268 95 TGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRT 174 (427)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccccccCcccccccc
Confidence 9999999999999999999999999986432 11000 00 0 00
Q ss_pred CC-C-------------C-----------------------------CC------CCcc-------------cCCCCCCC
Q psy616 838 GM-L-------------S-----------------------------PD------GKCY-------------VFDERANG 855 (1152)
Q Consensus 838 g~-l-------------s-----------------------------~~------g~~~-------------~Fd~~a~G 855 (1152)
++ + + |- ...| .|+.+-+|
T Consensus 175 ~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e~l~~~~~v~~p~~~g 254 (427)
T PRK09268 175 GLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLEKLAKLKPVFGKGGRA 254 (427)
T ss_pred CCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHHHHhCCCcccccCCCC
Confidence 11 0 0 11 0111 12221123
Q ss_pred c-------ccccccEEEEEcccchhhcCCCceEEEE-EEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy616 856 L-------VPSEAVVAVVLKRLSRALSDGDPIHAII-RGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYI 927 (1152)
Q Consensus 856 ~-------v~gEG~~~vvLk~l~~A~~dgd~i~avI-~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yv 927 (1152)
. .+.+|++++||.+.+.|.+-+.++.++| .+.+..++....... -..+-..+++++|++||++|+|||++
T Consensus 255 ~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~--~~~~~~~a~~~a~~~AGl~~~Did~~ 332 (427)
T PRK09268 255 TMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEG--LLMAPAYAVPRLLARNGLTLQDFDFY 332 (427)
T ss_pred ceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccch--hhccHHHHHHHHHHHcCCCHHHCCEE
Confidence 3 3578999999999999988888776676 666666664211000 11233468999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHH-hccc----------CCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCC
Q psy616 928 ITHGTGTKLGDPVEINALHDV-FKNK----------TYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASL 996 (1152)
Q Consensus 928 e~hgtgT~~gD~~E~~al~~~-f~~~----------~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~ 996 (1152)
|.|...+.. -..|+..+... |+.. ....+..+-|..++. ||+.+|+|+..++.++.+|+.+
T Consensus 333 Ei~d~Fa~~-~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~-GhP~gATG~~~v~e~~~QL~~~------ 404 (427)
T PRK09268 333 EIHEAFASQ-VLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAA-GHPFAATGGRIVATLAKLLAEK------ 404 (427)
T ss_pred EeccccHHH-HHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhc-CCCcccchHHHHHHHHHHHHhc------
Confidence 999887752 11244333211 2111 111111233556655 9999999999999999999861
Q ss_pred CCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 997 HCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 997 ~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..++++++..+-||.-..+|||.
T Consensus 405 ------------------------------~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 405 ------------------------------GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred ------------------------------CCCEEEEEEcccCchheEEEEeC
Confidence 23677888888889988899873
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-13 Score=142.11 Aligned_cols=143 Identities=15% Similarity=0.198 Sum_probs=112.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++||||++|||+++|+.|+++|+. |++++|+. ..++..++++..+.++.++++|+++.++++++++++.+.||+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAK-VIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999974 56656653 334455666666777888999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcC----CCCCEEEEecCCcccc
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK----NKLDFVCYFSSSSAIL 381 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~----~~~~~iV~~SS~a~~~ 381 (1152)
||++|||||+......+.+.+.+++ + ..++.+.+...+.+.++|++..+ .+.+.|..+||.+..+
T Consensus 94 iDilVnnAG~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
T PRK06720 94 IDMLFQNAGLYKIDSIFSRQQENDS-N--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF 162 (169)
T ss_pred CCEEEECCCcCCCCCcccccchhHh-h--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence 9999999998763455656566663 3 77788888999999998876533 3567788888765543
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.5e-13 Score=156.96 Aligned_cols=245 Identities=16% Similarity=0.165 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC---Ccccccccc
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG---PVMAINTAC 795 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G---Ps~tvdtaC 795 (1152)
..+..+++.+||++||+.+++++ .+++++..+++. ....+.++...+|+++ |++.|+.+|
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~dId----~li~~~~~~~~~-------------~p~~a~~v~~~lgl~~~~~~~~~v~~~C 115 (329)
T PRK07204 53 SYMGAEAAKKAVEDAKLTLDDID----CIICASGTIQQA-------------IPCTASLIQEQLGLQHSGIPCFDINSTC 115 (329)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC-------------CccHHHHHHHHhCCCCCCceEEEccchh
Confidence 56899999999999999988876 466665433211 1245778999999986 899999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhc
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 875 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~ 875 (1152)
+|++.||++|...|++|.++.+||.+++..... + .|+...++++.|+|++++||++.+..
T Consensus 116 ~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~-----------~-------~~~~~~~~~lfGDGAaA~ll~~~~~~-- 175 (329)
T PRK07204 116 LSFITALDTISYAIECGRYKRVLIISSEISSVG-----------L-------NWGQNESCILFGDGAAAVVITKGDHS-- 175 (329)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEeccccCC-----------C-------CcccCcceEEEecccEEEEEEEcCCC--
Confidence 999999999999999999999999999973211 0 12334567899999999999975432
Q ss_pred CCCceEE-------------EEEEEEEecCCCCCC-------CCCCCH--------HHHHHHHHHHHHHcCCCCCCccEE
Q psy616 876 DGDPIHA-------------IIRGSGINYDGKTNG-------ITAPNG--------ISQTELIKSVYKKSNLNPEDINYI 927 (1152)
Q Consensus 876 dgd~i~a-------------vI~g~a~~~dG~~~~-------~~~P~~--------~~q~~~i~~al~~Agi~p~dI~yv 927 (1152)
.+|.+ .+++.+...+..... ....++ ....++++++|+++|++++||+|+
T Consensus 176 --~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~ 253 (329)
T PRK07204 176 --SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADIDLI 253 (329)
T ss_pred --CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 23322 222222111100000 000111 123478999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCccccc
Q psy616 928 ITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIIL 1007 (1152)
Q Consensus 928 e~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~ 1007 (1152)
-.|..+.+. .+++.+.++-... + +-.+...+||+.+|+=...|... ++.+.+.|
T Consensus 254 ~~H~~~~~~-----~~~i~~~l~l~~e--~---~~~~~~~~Gn~~sas~~~~L~~~---~~~g~~~~------------- 307 (329)
T PRK07204 254 VPHQASGPA-----MRLIRKKLGVDEE--R---FVTIFEDHGNMIAASIPVALFEA---IKQKKVQR------------- 307 (329)
T ss_pred EeCCCCHHH-----HHHHHHHcCCCHH--H---hhhhHhhhCcHHHHHHHHHHHHH---HHcCCCCC-------------
Confidence 999998874 4566777764321 1 22577889999877655555432 33332211
Q ss_pred CCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1008 KNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1008 ~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
-...++.+||.|-+-+.++|+
T Consensus 308 --------------------Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 308 --------------------GNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred --------------------CCEEEEEEEchhhhheeeEEe
Confidence 134578899999999888886
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.51 E-value=6e-13 Score=137.55 Aligned_cols=186 Identities=12% Similarity=0.085 Sum_probs=154.4
Q ss_pred ccCCCEEEEEC--CchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 233 IKQGGTYLITG--GTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 233 ~~~~~~~LITG--g~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
+-++|++||+| -.+.|+..||+.|.++|+ .++++...+..++..++|.+.-..-.+++|||++.++++++++++.++
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GA-eL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~ 81 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGA-ELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK 81 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence 34789999999 368999999999999998 677766666666666666443333568999999999999999999999
Q ss_pred cCCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 311 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
||.||+|||+-|.... .+.+.+.+.|.|...+++-..+...|.+++.|+|. +.+.+|.+|-..+..--|++-
T Consensus 82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~-----~ggSiltLtYlgs~r~vPnYN 156 (259)
T COG0623 82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN-----NGGSILTLTYLGSERVVPNYN 156 (259)
T ss_pred hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC-----CCCcEEEEEeccceeecCCCc
Confidence 9999999999987652 45677899999999999999999999999999973 356799998887777667777
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
.-+.||++|++-.+|++...- ..++|+.+|.=||.+.
T Consensus 157 vMGvAKAaLEasvRyLA~dlG--~~gIRVNaISAGPIrT 193 (259)
T COG0623 157 VMGVAKAALEASVRYLAADLG--KEGIRVNAISAGPIRT 193 (259)
T ss_pred hhHHHHHHHHHHHHHHHHHhC--ccCeEEeeecccchHH
Confidence 889999999999999987632 4577888888888764
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-12 Score=149.17 Aligned_cols=258 Identities=17% Similarity=0.191 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
..|+-++..++ ++|++ ++++ .|++|...+. + ..++..+....|+. =|+++|+++|+
T Consensus 26 ~~L~~~a~~~~--~~gi~-~~Id----~vi~G~~~~~------------~---~~~~r~~~~~~Gl~~~~p~~tV~~~Ca 83 (361)
T PRK06690 26 QQLAAPLLTFL--SKGME-REID----DVILGNVVGP------------G---GNVARLSALEAGLGLHIPGVTIDRQCG 83 (361)
T ss_pred HHHHHHHHHHH--Hccch-hhcC----EEEEEecCCC------------c---chHHHHHHHHcCCCCCCCceehhhhhh
Confidence 34555566665 44885 6666 6888865321 0 11232367788886 49999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH-HH------------H------HHhcCCC----------C-----
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA-YI------------A------MTSAGML----------S----- 841 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~-~~------------~------~~~~g~l----------s----- 841 (1152)
||+.|+..|++.|++|++|++||||++.+.. |.. .. . ..+.|+- |
T Consensus 84 SG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~ 163 (361)
T PRK06690 84 AGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTL 163 (361)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997643 210 00 0 0011110 0
Q ss_pred ---CCCC---------------c--------------ccCCCCCCCcc-------cccccEEEEEcccchhhcCCCceEE
Q psy616 842 ---PDGK---------------C--------------YVFDERANGLV-------PSEAVVAVVLKRLSRALSDGDPIHA 882 (1152)
Q Consensus 842 ---~~g~---------------~--------------~~Fd~~a~G~v-------~gEG~~~vvLk~l~~A~~dgd~i~a 882 (1152)
.+++ . ..|+. +|.+ +++|++++||.+.+.|.+.|.++.+
T Consensus 164 ~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~--~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~ 241 (361)
T PRK06690 164 QALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLH--NGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVL 241 (361)
T ss_pred HHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccC--CCceeccccCCCCCCeEEEEEecHHHHHHcCCCceE
Confidence 1111 1 11221 3434 4899999999999999999988888
Q ss_pred EEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee
Q psy616 883 IIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT 962 (1152)
Q Consensus 883 vI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig 962 (1152)
.|.|++....-. ... ..+...+++++|+++|++|+|||++|.|-.-+. .+.-.++ .++-. ..+..+-|
T Consensus 242 ~i~~~~~~~~~~--~~~---~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~----~~~~~~e-~lgl~--~~~vn~~G 309 (361)
T PRK06690 242 RFVRSAVVGVDP--NLP---GTGPIFAVNKLLNEMNMKVEDIDYFEINEAFAS----KVVACAK-ELQIP--YEKLNVNG 309 (361)
T ss_pred EEEEEEEeccCc--ccc---hhHHHHHHHHHHHHcCCCHHHcCEeeecchhHH----HHHHHHH-hcCCC--chhcccCC
Confidence 889888654221 111 346678999999999999999999999966544 2322222 22211 11112335
Q ss_pred ccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcce
Q psy616 963 SNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTN 1042 (1152)
Q Consensus 963 svKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~n 1042 (1152)
..++. ||+.+++|+..++-++.+|+.+ ..|++.++...-||.-
T Consensus 310 G~la~-Ghp~GatG~~~~~~~~~ql~~~------------------------------------~~~~g~~~~c~~gG~g 352 (361)
T PRK06690 310 GAIAL-GHPYGASGAMLVTRLFYQAKRE------------------------------------DMKYGIATLGIGGGIG 352 (361)
T ss_pred cHHhc-cCchhhhHHHHHHHHHHHHHHh------------------------------------CCCEEEEEEcccCcce
Confidence 55554 9999999999999999999761 1255666666677888
Q ss_pred EEEEEcc
Q psy616 1043 AHIVLQE 1049 (1152)
Q Consensus 1043 ah~il~~ 1049 (1152)
..+|||.
T Consensus 353 ~a~~~e~ 359 (361)
T PRK06690 353 LALLFEK 359 (361)
T ss_pred eEEEEEe
Confidence 8888885
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.8e-12 Score=151.90 Aligned_cols=241 Identities=14% Similarity=0.099 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCs 796 (1152)
..|+.|++++||+|||+++++++ +++++.. . . .. ...++..+|+++ |...|+++|+
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID----~~~~~~~-~-~------------~~----~~~l~~~lGl~~~~~~~~v~~gg~ 82 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVD----GLVTFTM-D-T------------NP----EIAVARALGIGELKFFSRIHYGGG 82 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecC-c-c------------cc----HHHHHHHCCCCCCcceeeecCCcH
Confidence 45889999999999999988887 5665321 1 0 00 124888899987 4468899999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccc--cCcCHH------------H---HHHH-HhcCCCC-----------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVN--LMISPE------------A---YIAM-TSAGMLS----------------- 841 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~--~~~~~~------------~---~~~~-~~~g~ls----------------- 841 (1152)
|+..+++.|++.|++|+||++||.|+. ...... . ...+ ...|+..
T Consensus 83 sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~~G 162 (386)
T PRK07855 83 AACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAMLARRYMHEYG 162 (386)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHHHHHHHHHHHC
Confidence 999999999999999999999999882 110000 0 0000 0122211
Q ss_pred --------------CCCCcccCCCC----------------------CCCcccccccEEEEEcccchhhcCCCceEEEEE
Q psy616 842 --------------PDGKCYVFDER----------------------ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIR 885 (1152)
Q Consensus 842 --------------~~g~~~~Fd~~----------------------a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~ 885 (1152)
..+.-.|+..- -|--..++|++++||-+.+.|.+-+++. ..|+
T Consensus 163 ~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~p-v~I~ 241 (386)
T PRK07855 163 ATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSAERARDLKQRP-AVIK 241 (386)
T ss_pred CCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecHHHHhhCCCCC-EEEE
Confidence 01111222111 1223358999999999999998776664 5899
Q ss_pred EEEEecCCCCCCC-----CCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hcc-------
Q psy616 886 GSGINYDGKTNGI-----TAP-NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKN------- 951 (1152)
Q Consensus 886 g~a~~~dG~~~~~-----~~P-~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~------- 951 (1152)
|++..++.....+ ..+ .....+.+++++|++||++|+|||++|.|.+-|. .|+-.+... |+.
T Consensus 242 g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~----~~l~~~E~lG~~~~Ge~~~~ 317 (386)
T PRK07855 242 AAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTP----FVLMQLEELGFCGRGEAKDF 317 (386)
T ss_pred EEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcH----HHHHHHHHcCCCCCCcHHHH
Confidence 9987665432111 001 1234457999999999999999999999999886 455544443 221
Q ss_pred ----cCCCCCceee---eccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 952 ----KTYNQKFCAI---TSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 952 ----~~~~~~~~~i---gsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
.......+|| |..|++ ||+. |+.+++.+++||+..
T Consensus 318 v~~G~~~~~G~lPvN~sGGll~~-gh~~---G~~~i~E~~~QLrG~ 359 (386)
T PRK07855 318 IADGALELGGRLPINTHGGQLGE-AYIH---GMNGIAEAVRQLRGT 359 (386)
T ss_pred HHCCCcccCCcccccCCCccccc-Cchh---hHHHHHHHHHHHhCC
Confidence 1222344788 999997 8965 999999999999984
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.6e-12 Score=151.26 Aligned_cols=262 Identities=15% Similarity=0.177 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccchhH
Q psy616 721 HLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACSSS 798 (1152)
Q Consensus 721 l~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaCsSs 798 (1152)
|.-.+..++|+.+|++++.++ -|++|...... .....++-.++..-|| +=|.+||+..|+||
T Consensus 32 L~~~~~~~~l~r~~i~~~~id----~vi~G~~~~~g------------~~g~n~aR~~al~aglp~~vp~~tvnr~C~Sg 95 (417)
T PRK06025 32 LAATVLKALAERNGLNTADVD----DIIWSTSSQRG------------KQGGDLGRMAALDAGYDIKASGVTLDRFCGGG 95 (417)
T ss_pred HHHHHHHHHHHhcCCCHHHCC----EEEEEcCCCcC------------cccCcHHHHHHHhCCCCCCCCeeeeccccchH
Confidence 445577889999999988887 58888653210 0001133333444455 55999999999999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEeccccCc-CHHHHH-----H-----HHh--cC---------CC------------C---
Q psy616 799 LVATHIACQSLRQHECDTAISAGVNLMI-SPEAYI-----A-----MTS--AG---------ML------------S--- 841 (1152)
Q Consensus 799 l~Al~~A~~~l~~G~~d~alvgGv~~~~-~~~~~~-----~-----~~~--~g---------~l------------s--- 841 (1152)
|.|+.+|++.|+.|++|++|+||++.+. .|.... . ... .+ |- |
T Consensus 96 l~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~~~isRe~ 175 (417)
T PRK06025 96 ITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATMEGITREA 175 (417)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHHHHHHHHHhCCCHHH
Confidence 9999999999999999999999999765 232100 0 000 00 00 0
Q ss_pred --------------------------C------------CC------------Ccc-cCCCC------CCCc--------
Q psy616 842 --------------------------P------------DG------------KCY-VFDER------ANGL-------- 856 (1152)
Q Consensus 842 --------------------------~------------~g------------~~~-~Fd~~------a~G~-------- 856 (1152)
| |. +-+ .|+.. .+|.
T Consensus 176 ~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~~~~~~~g~~~~~~~~~ 255 (417)
T PRK06025 176 LDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTTYRGLINQ 255 (417)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccccccccCCcccccccccc
Confidence 0 11 111 24320 1344
Q ss_pred -----------------ccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q psy616 857 -----------------VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNL 919 (1152)
Q Consensus 857 -----------------v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi 919 (1152)
..+||++++||.+.+.|.+.|.++++.|.|++...+...... .+...+++++|+++|+
T Consensus 256 ~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~~-----~~p~~Ai~~aL~~AGl 330 (417)
T PRK06025 256 KYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLML-----NAPVPAAKKVLAKAGL 330 (417)
T ss_pred ccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhc-----ccHHHHHHHHHHHcCC
Confidence 248999999999999999999999999999998765432111 1235789999999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHH--HHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCC
Q psy616 920 NPEDINYIITHGTGTKLGDPVEINAL--HDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLH 997 (1152)
Q Consensus 920 ~p~dI~yve~hgtgT~~gD~~E~~al--~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~ 997 (1152)
+++|||++|.| |+.....+ .+.++-. ..++.+..-+-.+||+.+++|+..++.++.+|+.+
T Consensus 331 ~~~DID~~ei~-------eaFa~~~l~~~~~lg~~---~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~------- 393 (417)
T PRK06025 331 TKDDIDLWEIN-------EAFAVVAEKFIRDLDLD---RDKVNVNGGAIALGHPIGATGSILIGTVLDELERR------- 393 (417)
T ss_pred CHHHCcEEEEc-------hHHHHHHHHHHHHcCCC---hhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh-------
Confidence 99999999998 44433322 2333321 12344555556679999999999999999999751
Q ss_pred CCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 998 CEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 998 ~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++.++-.+.||.-..+|||.
T Consensus 394 -----------------------------g~~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 394 -----------------------------GLKRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred -----------------------------CCCeEEEEEEeeccceeEEEEEe
Confidence 02345666677889999999984
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.1e-12 Score=148.54 Aligned_cols=241 Identities=20% Similarity=0.265 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
..++++++.+||++||+++++++ .+++++...++. ....+.+++..+|+++ |.+.|+.+|+|
T Consensus 52 ~~la~~A~~~al~~agl~~~~Id----~~i~~~~~~~~~-------------~~~~a~~l~~~lGl~~~~~~~v~~~C~s 114 (318)
T TIGR00747 52 STMGFEAAKRAIENAGISKDDID----LIIVATTTPDHA-------------FPSAACMVQAYLGIKGIPAFDLSAACAG 114 (318)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC-------------CChHHHHHHHHhCCCCCcEeehhhhhHH
Confidence 56789999999999999888776 666765443210 1124678999999999 99999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCC
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 877 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dg 877 (1152)
++.||+.|+..|++|.++.+||+|++..... +. +. .....++.|+|+++++|.+.+...
T Consensus 115 ~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~-----------~~------~~-~~~~~~~~GDGAaA~lL~~~~~~~--- 173 (318)
T TIGR00747 115 FIYALSVAKQYIESGKYKTVLVVGAEKLSST-----------LD------WT-DRGTCVLFGDGAGAVVLGESEDPG--- 173 (318)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhcCc-----------CC------cC-CCCeEEEEecceeEEEEeecCCCC---
Confidence 9999999999999999999999999974322 11 11 123456799999999998755431
Q ss_pred CceEEEEEEEEEecCCCC-CCCCCCC-----------------------HHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy616 878 DPIHAIIRGSGINYDGKT-NGITAPN-----------------------GISQTELIKSVYKKSNLNPEDINYIITHGTG 933 (1152)
Q Consensus 878 d~i~avI~g~a~~~dG~~-~~~~~P~-----------------------~~~q~~~i~~al~~Agi~p~dI~yve~hgtg 933 (1152)
. |.++.+.++|.. ..++.|. .....++++++|+++|++++||+|+-.|..+
T Consensus 174 -~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~~ 248 (318)
T TIGR00747 174 -G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWFVPHQAN 248 (318)
T ss_pred -c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC
Confidence 1 233333333321 1111110 1223567899999999999999999999887
Q ss_pred CCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCee
Q psy616 934 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 1013 (1152)
Q Consensus 934 T~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~ 1013 (1152)
.+.-+ .+.+.++-...+ .. -.. ..+||+.+|+=...|..++ +++.+.+
T Consensus 249 ~~~~~-----~~~~~lgi~~~k---~~-~~~-~~~Gn~~sas~~~~L~~~~---~~~~~~~------------------- 296 (318)
T TIGR00747 249 LRIIE-----ALAKRLELDMSQ---VV-KTV-HKYGNTSAASIPLALDELL---RTGRIKP------------------- 296 (318)
T ss_pred HHHHH-----HHHHHcCCCHHH---ee-ehH-hhhCCHHHHHHHHHHHHHH---HcCCCCC-------------------
Confidence 65333 344445432211 11 123 3489999988777765433 3332221
Q ss_pred eccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1014 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1014 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
..+.++-+||.|.+-..++|+
T Consensus 297 --------------Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 297 --------------GDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred --------------CCEEEEEEEehhheeeEEEEE
Confidence 124567889999888888875
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-11 Score=149.28 Aligned_cols=246 Identities=14% Similarity=0.024 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHhcCCC--CCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccc
Q psy616 719 QRHLLQESWLALEDAGYG--PNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTAC 795 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~--~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaC 795 (1152)
..|+.+++.+||+|||++ +++++ +++++..... . ....+..++..+|+.. +.....++|
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID----~v~v~~~~~~----~----------~~~~~~~la~~lGl~p~~~~~~~~GG 89 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAID----SVAVVNQLSW----R----------YRDPPGLLAERLGADPARTVYSPVGG 89 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCC----EEEEeccccc----c----------ccCHHHHHHHHcCCCCcceeEecCCC
Confidence 568899999999999998 78887 6777643211 0 0122466888889864 444566788
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHH-----------------------------HHHhcCCCCCC---
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYI-----------------------------AMTSAGMLSPD--- 843 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~-----------------------------~~~~~g~ls~~--- 843 (1152)
+|+..+|+.|++.|++|+||++||+|++.+.+..... .....|+..|.
T Consensus 90 ~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p~~~y 169 (498)
T PRK08257 90 NSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRPVYVY 169 (498)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCcchHH
Confidence 8999999999999999999999999988632210000 00011211110
Q ss_pred --------------------------------C-------CcccCCCC-------CCCc------------ccccccEEE
Q psy616 844 --------------------------------G-------KCYVFDER-------ANGL------------VPSEAVVAV 865 (1152)
Q Consensus 844 --------------------------------g-------~~~~Fd~~-------a~G~------------v~gEG~~~v 865 (1152)
+ .-++++.+ .+=+ ...+|++++
T Consensus 170 al~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~DGaaAv 249 (498)
T PRK08257 170 PLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAV 249 (498)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcccceEE
Confidence 0 00112211 1111 257999999
Q ss_pred EEcccchhhcCC---CceEEEEEEEEEecCCCCCCC-CC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHH
Q psy616 866 VLKRLSRALSDG---DPIHAIIRGSGINYDGKTNGI-TA-PNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPV 940 (1152)
Q Consensus 866 vLk~l~~A~~dg---d~i~avI~g~a~~~dG~~~~~-~~-P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~ 940 (1152)
||.+.+.|.+-+ ++ ...|+|++..+|...... .. ....+...+.++||++||++|+||+++|.|.+.|. .
T Consensus 250 il~S~e~A~~l~~~~~~-~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~----~ 324 (498)
T PRK08257 250 LLTSVAKARRLGVPEDR-WVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPS----A 324 (498)
T ss_pred EEeeHHHHHhcCCCCCc-eEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHH----H
Confidence 999999998776 43 467899988877532110 00 11234567999999999999999999999998876 5
Q ss_pred HHHHHHHH-hcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhc
Q psy616 941 EINALHDV-FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 989 (1152)
Q Consensus 941 E~~al~~~-f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~ 989 (1152)
|+.++... |+... +.+...-|..++. ||+.++.|+.+++.++.+|+.
T Consensus 325 ~~~~~E~LGl~~~g-~~pvN~sGGl~s~-G~P~~a~g~~~i~E~v~QLRg 372 (498)
T PRK08257 325 VQVAARELGLDLDD-PRPLTVTGGLPFF-GGPGNNYVTHAIAEMVERLRA 372 (498)
T ss_pred HHHHHHHcCcCCCC-CCCcCCCcChhhc-CCchhhHHHHHHHHHHHHHhh
Confidence 66666555 55432 1122234666665 999999999999999999997
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=142.20 Aligned_cols=166 Identities=21% Similarity=0.254 Sum_probs=120.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcC-CcEEEEecCCcchH-HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNS-IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~G-a~~vil~~R~~~~~-~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+|+||.++++.|+++| ..+|+++.|+.... .+.+.+. +.++.++.+|++|.+++.++++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------- 73 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------- 73 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh-------
Confidence 47899999999999999999999997 35677777664322 2222221 2468899999999998887664
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
.+|+|||+||... . +..+.++ ...+++|+.|++++.+++.+ ...+.||++||.....+ ...|+++
T Consensus 74 ~iD~Vih~Ag~~~-~-~~~~~~~---~~~~~~Nv~g~~~ll~aa~~-------~~~~~iV~~SS~~~~~p---~~~Y~~s 138 (324)
T TIGR03589 74 GVDYVVHAAALKQ-V-PAAEYNP---FECIRTNINGAQNVIDAAID-------NGVKRVVALSTDKAANP---INLYGAT 138 (324)
T ss_pred cCCEEEECcccCC-C-chhhcCH---HHHHHHHHHHHHHHHHHHHH-------cCCCEEEEEeCCCCCCC---CCHHHHH
Confidence 4899999999754 2 2333343 36899999999999999653 24568999999765433 4679999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
|++.+.+++....... ..+.+++++..+...+
T Consensus 139 K~~~E~l~~~~~~~~~--~~gi~~~~lR~g~v~G 170 (324)
T TIGR03589 139 KLASDKLFVAANNISG--SKGTRFSVVRYGNVVG 170 (324)
T ss_pred HHHHHHHHHHHHhhcc--ccCcEEEEEeecceeC
Confidence 9999999876543211 2345888888776643
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.4e-11 Score=138.98 Aligned_cols=170 Identities=17% Similarity=0.139 Sum_probs=121.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||+|+||.++++.|+++|..+++ +.|+.. .+.....+... ..++.++.+|++|.+++.++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINA-TVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------ 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEE-EEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc------
Confidence 4789999999999999999999999985444 444432 22222222211 2468889999999998887764
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-----C-
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-----G- 385 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-----g- 385 (1152)
.+|.|||+||... . ..+.+.+...+++|+.|++++.+++.+.+ ..+.||++||+++..+.. +
T Consensus 77 -~~d~vih~A~~~~-~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~------~~~~iv~~SS~~~~~~~~~~~~~~~ 144 (325)
T PLN02989 77 -GCETVFHTASPVA-I----TVKTDPQVELINPAVNGTINVLRTCTKVS------SVKRVILTSSMAAVLAPETKLGPND 144 (325)
T ss_pred -CCCEEEEeCCCCC-C----CCCCChHHHHHHHHHHHHHHHHHHHHHcC------CceEEEEecchhheecCCccCCCCC
Confidence 4899999999643 1 23345678899999999999999976531 245799999987765421 0
Q ss_pred ----------------ChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcccCccc
Q psy616 386 ----------------SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNSKF 429 (1152)
Q Consensus 386 ----------------~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~Gm 429 (1152)
...|+.+|...+.++....++ ++ +++.+..+..-+.++
T Consensus 145 ~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~------~~~ilR~~~vyGp~~ 199 (325)
T PLN02989 145 VVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEI------DLIVLNPGLVTGPIL 199 (325)
T ss_pred ccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCC------eEEEEcCCceeCCCC
Confidence 246999999999888765443 33 677777666554443
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.5e-12 Score=145.94 Aligned_cols=214 Identities=20% Similarity=0.236 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC-CCCcccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL-KGPVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l-~GPs~tvdtaCs 796 (1152)
...++.+++.+||+++|+++++++ .+++++...++. ....+.+++..+|+ +.|++.|+.+|+
T Consensus 50 ~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~-------------~~~~~~~l~~~lg~~~~~~~~v~~~C~ 112 (320)
T cd00830 50 TSDLAVEAAKKALEDAGIDADDID----LIIVATSTPDYL-------------FPATACLVQARLGAKNAAAFDINAACS 112 (320)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CCcHHHHHHHHhCCCCCcEeeccccch
Confidence 478899999999999999888776 566665443221 01256789999999 668899999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||++|++.|++|.++.+||++++.+.... .|+....+++.|+|++++||++.+.
T Consensus 113 s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~~~~~~~~~GDgAaA~ll~~~~~---- 170 (320)
T cd00830 113 GFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL------------------DWTDRSTAVLFGDGAGAVVLEATEE---- 170 (320)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------CcccCCceEEEeccceEEEEEecCC----
Confidence 999999999999999999999999999732210 1455567899999999999997543
Q ss_pred CCceEEEEEEEEEecCCCCCC-C-------C----------------CCC-----HHHHHHHHHHHHHHcCCCCCCccEE
Q psy616 877 GDPIHAIIRGSGINYDGKTNG-I-------T----------------APN-----GISQTELIKSVYKKSNLNPEDINYI 927 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~~~~-~-------~----------------~P~-----~~~q~~~i~~al~~Agi~p~dI~yv 927 (1152)
+.+|.. +...+++.... + . .+. .....++++++|+++|++++||+|+
T Consensus 171 ~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~ 246 (320)
T cd00830 171 DPGILD----SVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWF 246 (320)
T ss_pred CCcEEE----EEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHCCEE
Confidence 233433 33333332110 0 0 000 1233578999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHH
Q psy616 928 ITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLV 984 (1152)
Q Consensus 928 e~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~ 984 (1152)
-.|..+.+.-+ .+.+.++-...+ . -.+-..+||+.+|+=...|..++
T Consensus 247 ~~h~~~~~~~~-----~~~~~lgl~~~~---~--~~~~~~~Gn~~sas~~~~L~~~~ 293 (320)
T cd00830 247 VPHQANLRIIE-----AVAKRLGLPEEK---V--VVNLDRYGNTSAASIPLALDEAI 293 (320)
T ss_pred EECCCCHHHHH-----HHHHHhCCCHHH---h--hhhHHhhCcHHHHHHHHHHHHHH
Confidence 99988766433 344445432211 1 12445789999998777776543
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.6e-11 Score=144.30 Aligned_cols=238 Identities=20% Similarity=0.233 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCs 796 (1152)
...++.+++.+||+++|+++++++ .+++++..+++. . ...+.++...+|+++ |.+.|..+|+
T Consensus 63 ~~~La~~A~~~aL~~agi~~~dId----~li~~s~~~~~~--------~-----p~~a~~v~~~Lgl~~~~~~~v~~~Ca 125 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGDIE----LLACGTSQPDQL--------M-----PGHASMVHGELGAPPIEVVSSAGVCA 125 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEECCCCcC--------C-----hHHHHHHHhhCCCCCCceeeecCcCH
Confidence 467899999999999999988876 577776543311 1 123467888889876 8899999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHh-cCCCC--CCCCcccCCCCCCCcccccccEEEEEcccchh
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTS-AGMLS--PDGKCYVFDERANGLVPSEAVVAVVLKRLSRA 873 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~-~g~ls--~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A 873 (1152)
|++.||+.|.+.|++|.++.+||.|++.+........+.. .+.++ ++..+++|+.+.+||+.|+|++++||++.++.
T Consensus 126 s~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~ 205 (378)
T PRK06816 126 AGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRP 205 (378)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCC
Confidence 9999999999999999999999999998544332222211 22222 23468999999999999999999999875542
Q ss_pred hcCCCc--eEEEEEEEE-Eec------------CCCCCCCC--CC-------------CHHHH--------HHHHHHHHH
Q psy616 874 LSDGDP--IHAIIRGSG-INY------------DGKTNGIT--AP-------------NGISQ--------TELIKSVYK 915 (1152)
Q Consensus 874 ~~dgd~--i~avI~g~a-~~~------------dG~~~~~~--~P-------------~~~~q--------~~~i~~al~ 915 (1152)
.|.. ++.+..++. ..+ ++...+.. .+ +.... ...++++|+
T Consensus 206 --~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~ 283 (378)
T PRK06816 206 --DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVD 283 (378)
T ss_pred --CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHH
Confidence 2221 111111111 000 11000000 00 11111 567888999
Q ss_pred HcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhc----ccCCCCCceeeeccCCCCCccccchhhHHHHHH
Q psy616 916 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFK----NKTYNQKFCAITSNKSNIGHTFAASGLVSLINL 983 (1152)
Q Consensus 916 ~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~----~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~ 983 (1152)
++|++++||+|+-.|-......+ ++.+.+. .-. ..+ + +. .=..+||+.+|+-...|-.+
T Consensus 284 ~~gl~~~DId~~v~Hq~n~~~~~-----~v~~~l~~~~~gl~-~~k-~-~~-~~~~~GNt~sAsipi~L~~a 346 (378)
T PRK06816 284 KRNLDPDDIDYFLPHYSSEYFRE-----KIVELLAKAGFMIP-EEK-W-FT-NLATVGNTGSASIYIMLDEL 346 (378)
T ss_pred HcCCChhhCCEEeeCcccHHHHH-----HHHHHHHhccCCCC-hhh-e-EE-eccccccccchHHHHHHHHH
Confidence 99999999999999977655443 3333331 111 111 1 12 23478999999877777544
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.4e-11 Score=139.03 Aligned_cols=240 Identities=15% Similarity=0.033 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-C-Ccccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-G-PVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-G-Ps~tvdtaC 795 (1152)
...|+.|++.+||+|||+++++++ +++.+. .+..... .. . ...++..+|+. + |.+.++
T Consensus 24 ~~el~~eA~~~Al~DAgl~~~dID----~~~~~~--~~~~~~~----~~----~---~~~~~~~~G~~~~~~~~~v~--- 83 (352)
T PRK07937 24 GVEMLMPCFAELYAELGITKSDIG----FWCSGS--SDYLAGR----AF----S---FISAIDSIGAVPPINESHVE--- 83 (352)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEc--ccccccc----cc----c---hhhHHhhccCCCCCceEEec---
Confidence 356889999999999999999887 554332 1111100 00 0 11244556763 3 455555
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcC--HHHHHH------HH-hcCCCC-------------------------
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMIS--PEAYIA------MT-SAGMLS------------------------- 841 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~--~~~~~~------~~-~~g~ls------------------------- 841 (1152)
+++..||+.|+.+|++|+||.+||.|++.... ...... +. ..|+..
T Consensus 84 ~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~v 163 (352)
T PRK07937 84 MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEV 163 (352)
T ss_pred CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 46888999999999999999999999874321 000000 00 001000
Q ss_pred -----CCCCcccCCCCC-------------------CCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCC
Q psy616 842 -----PDGKCYVFDERA-------------------NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNG 897 (1152)
Q Consensus 842 -----~~g~~~~Fd~~a-------------------~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~ 897 (1152)
..+.-.|+..-+ |--.+++|++++||-+.+.|.+-+++. +.|+|++..++.....
T Consensus 164 avk~r~nA~~NP~A~~rit~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~~~~ 242 (352)
T PRK07937 164 AARSRADARRNPSAEPSISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESPSLG 242 (352)
T ss_pred HHHHHHHHhhCchhhccCCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCcccc
Confidence 111122221111 222358999999999999998888777 9999998876654321
Q ss_pred CCCCCHHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hcccCCCCCceeeeccCCCCCccccch
Q psy616 898 ITAPNGISQTELIKSVYKK-SNLNPEDINYIITHGTGTKLGDPVEINALHDV-FKNKTYNQKFCAITSNKSNIGHTFAAS 975 (1152)
Q Consensus 898 ~~~P~~~~q~~~i~~al~~-Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~-f~~~~~~~~~~~igsvKsniGH~~~Aa 975 (1152)
..... ....++++.++ ||++|+|||++|.|..-|. .|+..+... |+. ..+..+-|..++ ||+.+|+
T Consensus 243 ~~d~~---~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~----~~l~~~e~lGl~g---~~pvN~~GG~l~--ghp~gat 310 (352)
T PRK07937 243 ARDLT---RSPSTALAAEAATGGDAGGVDVAELHAPFTH----QELILREALGLGD---KTKVNPSGGALA--ANPMFAA 310 (352)
T ss_pred ccccc---cHHHHHHHHHHhcCCCHHHCCEEEEeCCChH----HHHHHHHHcCCCC---CCCcCCCccchh--cCchhHH
Confidence 11111 12234455555 5999999999999998876 455444433 221 112234578887 9999999
Q ss_pred hhHHHHHHHHhhhcC
Q psy616 976 GLVSLINLVQSIKYK 990 (1152)
Q Consensus 976 G~~~lik~~l~l~~~ 990 (1152)
|+..++.++.||+.+
T Consensus 311 G~~~~~e~~~QL~g~ 325 (352)
T PRK07937 311 GLERIGEAARHIWDG 325 (352)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999885
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.7e-11 Score=144.92 Aligned_cols=205 Identities=11% Similarity=-0.010 Sum_probs=129.2
Q ss_pred CccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-----CC----CcEEEEEecCCCHHH
Q psy616 230 NSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-----FN----NKAIYIQVDVSDKLK 299 (1152)
Q Consensus 230 ~~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-----~g----~~v~~~~~Dvsd~~~ 299 (1152)
....+.++++|||||+||||+.++++|+++|+.++++ .|+ +..+.+.+.+.. .| .++.++.+|++|.++
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval-~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 3456789999999999999999999999999855544 554 333444444432 12 358899999999888
Q ss_pred HHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcc
Q psy616 300 MISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA 379 (1152)
Q Consensus 300 v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~ 379 (1152)
+.+ .++.+|+||||+|... . . ..+|...+.+|+.|+.++.+++.. ...++||++||+.+
T Consensus 153 I~~-------aLggiDiVVn~AG~~~-~-~-----v~d~~~~~~VN~~Gt~nLl~Aa~~-------agVgRIV~VSSiga 211 (576)
T PLN03209 153 IGP-------ALGNASVVICCIGASE-K-E-----VFDVTGPYRIDYLATKNLVDAATV-------AKVNHFILVTSLGT 211 (576)
T ss_pred HHH-------HhcCCCEEEEcccccc-c-c-----ccchhhHHHHHHHHHHHHHHHHHH-------hCCCEEEEEccchh
Confidence 754 3568999999999754 2 1 124778899999999999998643 24578999999876
Q ss_pred c-cCCCCChhhhHHHHHHHHH----HHHHHhcccccCCCceEEEEeCCcccCcccccc-ccccchhHHhhcC-CCCCCHH
Q psy616 380 I-LGDFGSCDYAMGNRFQTVY----AKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-NNEQTDFYFKSSK-QKVLHEN 452 (1152)
Q Consensus 380 ~-~g~~g~~~Yaaana~l~~l----a~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~~~~~~~~~~~~g-~~~l~~~ 452 (1152)
. .+.+.. .|. +++++..+ .++++..| ++++.|..|... +.|... ............. -+.++++
T Consensus 212 ~~~g~p~~-~~~-sk~~~~~~KraaE~~L~~sG------IrvTIVRPG~L~-tp~d~~~~t~~v~~~~~d~~~gr~isre 282 (576)
T PLN03209 212 NKVGFPAA-ILN-LFWGVLCWKRKAEEALIASG------LPYTIVRPGGME-RPTDAYKETHNLTLSEEDTLFGGQVSNL 282 (576)
T ss_pred cccCcccc-chh-hHHHHHHHHHHHHHHHHHcC------CCEEEEECCeec-CCccccccccceeeccccccCCCccCHH
Confidence 4 333322 233 34333222 23333333 477778776543 222110 0000000001111 1347889
Q ss_pred HHHHHHHHHHhcC
Q psy616 453 DGLKLFEQLLIQD 465 (1152)
Q Consensus 453 e~~~~l~~~l~~~ 465 (1152)
+.++++..++..+
T Consensus 283 DVA~vVvfLasd~ 295 (576)
T PLN03209 283 QVAELMACMAKNR 295 (576)
T ss_pred HHHHHHHHHHcCc
Confidence 9999888877644
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.7e-11 Score=141.54 Aligned_cols=242 Identities=17% Similarity=0.194 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCcccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs~tvdtaCs 796 (1152)
...++.+++.+||+++|+++++++ .+++++...++. ....+.++...+|++ .|.+.|+.+|+
T Consensus 53 ~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~-------------~~~~a~~l~~~lg~~~~~~~~v~~~C~ 115 (325)
T PRK12879 53 TSDLAIKAAERALARAGLDAEDID----LIIVATTTPDYL-------------FPSTASQVQARLGIPNAAAFDINAACA 115 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CChHHHHHHHHhCCCCCcEEEECccch
Confidence 456789999999999999887776 566665433221 112567899999997 58999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||+.|++.|++|.++.+||++++..... + .++....+++.|+|++++||++.++.
T Consensus 116 ~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~-----------~-------~~~~~~~~~~~GDgAaA~ll~~~~~~--- 174 (325)
T PRK12879 116 GFLYGLETANGLITSGLYKKVLVIGAERLSKV-----------T-------DYTDRTTCILFGDGAGAVVLEATENE--- 174 (325)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEehhhcCc-----------C-------CccccCceEEEeecceEEEEEecCCC---
Confidence 99999999999999999999999999863210 1 11122345789999999999975431
Q ss_pred CCceEEEEEEEEEecCCCC--------CC------------CCCCC--------HHHHHHHHHHHHHHcCCCCCCccEEE
Q psy616 877 GDPIHAIIRGSGINYDGKT--------NG------------ITAPN--------GISQTELIKSVYKKSNLNPEDINYII 928 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~~--------~~------------~~~P~--------~~~q~~~i~~al~~Agi~p~dI~yve 928 (1152)
..+... ...+++.. .+ ....+ .....++++++|+++|++++||+|+-
T Consensus 175 -~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~ 249 (325)
T PRK12879 175 -PGFIDY----VLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVI 249 (325)
T ss_pred -CCeEEE----EEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 222211 11111110 00 00011 11234678999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccC
Q psy616 929 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008 (1152)
Q Consensus 929 ~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~ 1008 (1152)
.|-.+.+. .+.+.+.++-...+ +.. +...+||+.+|+=...|... ++.+.+.|
T Consensus 250 ~h~~~~~~-----~~~~~~~lg~~~~~---~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~~~-------------- 302 (325)
T PRK12879 250 PHQANLRI-----IESLCEKLGIPMEK---TLV--SVEYYGNTSAATIPLALDLA---LEQGKIKP-------------- 302 (325)
T ss_pred ECCCCHHH-----HHHHHHHcCCCHHH---hhh--hHhhhCchHHHHHHHHHHHH---HHcCCCCC--------------
Confidence 99655332 44566666532211 122 45789999998877777544 34432211
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+ .+.++-+||.|-+-..++|+
T Consensus 303 -----------------G--d~vll~~~G~G~~~~~~l~~ 323 (325)
T PRK12879 303 -----------------G--DTLLLYGFGAGLTWAALLVK 323 (325)
T ss_pred -----------------C--CEEEEEEEchhhhhEEEEEE
Confidence 1 24568889999988888876
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.3e-11 Score=141.15 Aligned_cols=229 Identities=15% Similarity=0.139 Sum_probs=154.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCs 796 (1152)
..++.+++.+||+++|+.+++++ .+++++...++. ....+.++...+|++. |.+.|..+|+
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~~~~-------------~p~~a~~v~~~lgl~~~~~~~~v~~~C~ 124 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIG----LLINTSVCRDYL-------------EPATACRVHHNLGLPKSCANFDVSNACL 124 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CChHHHHHHHHcCCCCCCceeehhhhhH
Confidence 46889999999999999888776 566765432211 0125678999999974 7899999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||++|...|++|.++.+||.+.+... ......+ ..+.+++..+.+|+..-.++..|+|++++||.+.... ..
T Consensus 125 ~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~-~~ 200 (338)
T PRK09258 125 GFLNGMLDAANMIELGQIDYALVVSGESAR-EIVEATI--DRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLH-PR 200 (338)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEecccc-hhccchh--hhhccCccchhhhhhccceEEecccceEEEEecCCCC-CC
Confidence 999999999999999999999999999743 2211111 1233344444678888888999999999999875431 12
Q ss_pred CCceEEEEEEEEEecCCCCCCCCC-------CCH--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy616 877 GDPIHAIIRGSGINYDGKTNGITA-------PNG--------ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~~~~~~~-------P~~--------~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E 941 (1152)
+.. +.+.....++....... .+. ....++++++|+++|++++||+|+-.|-.+.+.-+
T Consensus 201 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~~~~--- 273 (338)
T PRK09258 201 GHR----LLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAAHTR--- 273 (338)
T ss_pred cce----eeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHHHHH---
Confidence 222 33333333332211111 111 23345888999999999999999999987766444
Q ss_pred HHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHH
Q psy616 942 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLIN 982 (1152)
Q Consensus 942 ~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik 982 (1152)
.+.+.++-...+ .. -.++ .+||+.+|+=...|-.
T Consensus 274 --~~~~~lgl~~~k---~~-~~~~-~~GN~~sas~~~~L~~ 307 (338)
T PRK09258 274 --AILKALGIDPEK---VF-TTFP-TLGNMGPASLPITLAM 307 (338)
T ss_pred --HHHHHhCCCHHH---ce-ehHh-hhCCcHHhHHHHHHHH
Confidence 444444432111 11 2344 6899998875555544
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.4e-11 Score=134.07 Aligned_cols=181 Identities=13% Similarity=0.043 Sum_probs=129.4
Q ss_pred HHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccc
Q psy616 252 FSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNIL 331 (1152)
Q Consensus 252 lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~ 331 (1152)
+|+.|+++|+ +|+++.|+....+ + ..+++||++|.++++++++++. ++||+||||||+.. .
T Consensus 1 ~a~~l~~~G~-~Vv~~~r~~~~~~----~------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~-~---- 61 (241)
T PRK12428 1 TARLLRFLGA-RVIGVDRREPGMT----L------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG-T---- 61 (241)
T ss_pred ChHHHHhCCC-EEEEEeCCcchhh----h------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC-C----
Confidence 4789999998 5555566543211 1 2467999999999999998874 68999999999753 2
Q ss_pred cCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc---------------------------CCC
Q psy616 332 EANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---------------------------GDF 384 (1152)
Q Consensus 332 ~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~---------------------------g~~ 384 (1152)
+.|++++++|+.|++++.+.+.|+|++ .+.||++||.++.. +.+
T Consensus 62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~-----~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (241)
T PRK12428 62 ----APVELVARVNFLGLRHLTEALLPRMAP-----GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVA 132 (241)
T ss_pred ----CCHHHhhhhchHHHHHHHHHHHHhccC-----CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCC
Confidence 248899999999999999999998632 26799999998862 556
Q ss_pred CChhhhHHHHHHHHHHHHHH-hcccccCCCceEEEEeCCcccCccccccccccc-hhHHh--hcCC-CCCCHHHHHHHHH
Q psy616 385 GSCDYAMGNRFQTVYAKYLN-NKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFK--SSKQ-KVLHENDGLKLFE 459 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~-~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~--~~g~-~~l~~~e~~~~l~ 459 (1152)
+...|+++|+++..|++.++ .+.. ..++++.+|.+|... +.|........ ..... ...+ +..+|++..+.+.
T Consensus 133 ~~~~Y~~sK~a~~~~~~~la~~e~~--~~girvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~ 209 (241)
T PRK12428 133 LATGYQLSKEALILWTMRQAQPWFG--ARGIRVNCVAPGPVF-TPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLV 209 (241)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhh--ccCeEEEEeecCCcc-CcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHH
Confidence 78999999999999999888 5432 346788999988664 44532211000 00010 1111 2357888888888
Q ss_pred HHHh
Q psy616 460 QLLI 463 (1152)
Q Consensus 460 ~~l~ 463 (1152)
.++.
T Consensus 210 ~l~s 213 (241)
T PRK12428 210 FLCS 213 (241)
T ss_pred HHcC
Confidence 7664
|
|
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.2e-11 Score=126.78 Aligned_cols=170 Identities=21% Similarity=0.237 Sum_probs=136.6
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCc----EEEEecCC-cchHHHHHHHHhC----CCcEEEEEecCCCHHHHHHHHHH
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYST----NLILSGRS-KLNSIIYKKLKKF----NNKAIYIQVDVSDKLKMISEINS 306 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~----~vil~~R~-~~~~~~~~~l~~~----g~~v~~~~~Dvsd~~~v~~~~~~ 306 (1152)
.|++||||+++|||+++|+.|.+.... ++++..|+ +..++..+.|.+. ..++.|+.+|+++..++.++..+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 479999999999999999999987544 56777887 5567777777754 35789999999999999999999
Q ss_pred HHhhcCCeeEEEEcccccCcCc-------------cc-------------ccCCHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy616 307 IINNIGPIDGVLHIAGISGLTS-------------NI-------------LEANYKNFYSVLSSKISGTIALNYALENTI 360 (1152)
Q Consensus 307 ~~~~~G~idgvIh~AG~~~~~~-------------~~-------------~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m 360 (1152)
+.++|.++|-|+-|||+...++ ++ -.++.+++..+|++||.|.+.|.+.+.|++
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll 162 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL 162 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence 9999999999999999754111 11 124678899999999999999999999986
Q ss_pred HHhcCCCCCEEEEecCCccccC---------CCCChhhhHHHHHHHHHHHHHHhccc
Q psy616 361 LKLQKNKLDFVCYFSSSSAILG---------DFGSCDYAMGNRFQTVYAKYLNNKNI 408 (1152)
Q Consensus 361 ~~~~~~~~~~iV~~SS~a~~~g---------~~g~~~Yaaana~l~~la~~~~~~g~ 408 (1152)
.. +....+|..||..+.-- ..|...|..+|..+|-|.-...+.+.
T Consensus 163 ~~---~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~ 216 (341)
T KOG1478|consen 163 CH---SDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFK 216 (341)
T ss_pred hc---CCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhcccc
Confidence 42 22227999999887543 34778899999999988776666554
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-10 Score=131.10 Aligned_cols=183 Identities=13% Similarity=-0.036 Sum_probs=130.4
Q ss_pred cCCCEEEEECCchhHHHH--HHHHHHHcCCcEEEEecCCcc------------hHHHHHHHHhCCCcEEEEEecCCCHHH
Q psy616 234 KQGGTYLITGGTGRLGML--FSDYLINKYSTNLILSGRSKL------------NSIIYKKLKKFNNKAIYIQVDVSDKLK 299 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~--lA~~La~~Ga~~vil~~R~~~------------~~~~~~~l~~~g~~v~~~~~Dvsd~~~ 299 (1152)
..+|++||||+++|||++ +|+.| +.|+.++++....+. .+...+.++..|..+..+.||++++++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 456899999999999999 89999 999876665432211 122344556668788899999999999
Q ss_pred HHHHHHHHHhhcCCeeEEEEcccccCcCc----------------cc-----------------ccCCHHHHHHHHhhhc
Q psy616 300 MISEINSIINNIGPIDGVLHIAGISGLTS----------------NI-----------------LEANYKNFYSVLSSKI 346 (1152)
Q Consensus 300 v~~~~~~~~~~~G~idgvIh~AG~~~~~~----------------~~-----------------~~~~~e~~~~~~~~kv 346 (1152)
++++++++.++||+||+||||+|...... .+ ...+.++++.+ +|+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--v~v 195 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--VKV 195 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--HHh
Confidence 99999999999999999999999863111 01 12445555544 455
Q ss_pred hHH-----HHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC--hhhhHHHHHHHHHHHHHHhcccccCCCceEEEE
Q psy616 347 SGT-----IALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITI 419 (1152)
Q Consensus 347 ~g~-----~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~--~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si 419 (1152)
+|. |.=.....+.| .+...+|.+|++.+..-.+.+ ..-+.||+.|++-+++++.+.- ..++++.++
T Consensus 196 Mggedw~~Wi~al~~a~ll-----a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~--~~giran~i 268 (398)
T PRK13656 196 MGGEDWELWIDALDEAGVL-----AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLA--AKGGDAYVS 268 (398)
T ss_pred hccchHHHHHHHHHhcccc-----cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhh--hcCCEEEEE
Confidence 665 22223333332 134679999998776654443 5778999999999999988743 346688888
Q ss_pred eCCcccC
Q psy616 420 NWPLWNN 426 (1152)
Q Consensus 420 ~wg~w~~ 426 (1152)
.-++...
T Consensus 269 ~~g~~~T 275 (398)
T PRK13656 269 VLKAVVT 275 (398)
T ss_pred ecCcccc
Confidence 7777653
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.32 E-value=4e-11 Score=139.89 Aligned_cols=175 Identities=17% Similarity=0.131 Sum_probs=123.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+|+||.++++.|+++|..++++ +|+.. .......+. .+.++.++.+|++|.+++.++++.. .
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 75 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGY-SLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----K 75 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEE-eCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----C
Confidence 47899999999999999999999999865544 45433 222222232 2345778999999999998888763 5
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc------------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL------------ 381 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~------------ 381 (1152)
+|.|||+||... ...+.+++...+++|+.|+.++.+++.. . ...+.||++||...+-
T Consensus 76 ~d~vih~A~~~~-----~~~~~~~~~~~~~~N~~g~~~ll~a~~~----~--~~~~~iv~~SS~~vyg~~~~~~~~~e~~ 144 (349)
T TIGR02622 76 PEIVFHLAAQPL-----VRKSYADPLETFETNVMGTVNLLEAIRA----I--GSVKAVVNVTSDKCYRNDEWVWGYRETD 144 (349)
T ss_pred CCEEEECCcccc-----cccchhCHHHHHHHhHHHHHHHHHHHHh----c--CCCCEEEEEechhhhCCCCCCCCCccCC
Confidence 899999998533 1345566778899999999999998632 1 2246799999964321
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhcccccC--CCceEEEEeCCcccCc
Q psy616 382 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKK--YTNKLITINWPLWNNS 427 (1152)
Q Consensus 382 g~~g~~~Yaaana~l~~la~~~~~~g~~~~--~~~~~~si~wg~w~~~ 427 (1152)
+..+...|+++|.+.+.+++..+.+..... .+.+++++..+.+-+.
T Consensus 145 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp 192 (349)
T TIGR02622 145 PLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGG 192 (349)
T ss_pred CCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCC
Confidence 112356899999999999987765421000 1347777877666543
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.2e-10 Score=132.54 Aligned_cols=169 Identities=19% Similarity=0.225 Sum_probs=116.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+|.||..++++|+++|..+++ +.|+.. .+.....+. .+.++.++.+|++|.+++.+++. .
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~-~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHA-TLRDPAKSLHLLSKWK-EGDRLRLFRADLQEEGSFDEAVK-------G 79 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHhhc-cCCeEEEEECCCCCHHHHHHHHc-------C
Confidence 5778999999999999999999999985444 455432 222233332 24568899999999988877763 4
Q ss_pred eeEEEEcccccCcCcc-cccCCHHHH--HHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------
Q psy616 314 IDGVLHIAGISGLTSN-ILEANYKNF--YSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------ 384 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~-~~~~~~e~~--~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------ 384 (1152)
+|.|||+|+... ... ....+.+++ ..++++++.|+.+|.+++.+. ...+.||++||.+.+.+.+
T Consensus 80 ~d~Vih~A~~~~-~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~------~~~~~~v~~SS~~vyg~~~~~~~~~ 152 (353)
T PLN02896 80 CDGVFHVAASME-FDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS------KTVKRVVFTSSISTLTAKDSNGRWR 152 (353)
T ss_pred CCEEEECCcccc-CCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc------CCccEEEEEechhhccccccCCCCC
Confidence 799999999765 221 123344444 567889999999999986432 2246799999976542111
Q ss_pred -------------------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 385 -------------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 -------------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
....|+.+|...+.+++...+.. +.+++.+..+..
T Consensus 153 ~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~lR~~~v 206 (353)
T PLN02896 153 AVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN-----GIDLVSVITTTV 206 (353)
T ss_pred CccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc-----CCeEEEEcCCcc
Confidence 11379999999999887765431 236666665433
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.25 E-value=4e-10 Score=128.40 Aligned_cols=204 Identities=12% Similarity=0.066 Sum_probs=132.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHH---HHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSII---YKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~---~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||+|+||..+++.|+++|..++ ++.|+...... ...+...+.++.++.+|++|.+++.+++.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~-~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------ 77 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVH-AAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------ 77 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEE-EEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc------
Confidence 467999999999999999999999998544 44554222222 22332224468889999999988765542
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-CC-----
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-FG----- 385 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-~g----- 385 (1152)
..|+|+|.++... . .+ ++++.++++|+.|++++.+++.+.+ ..+.||++||+++.... .+
T Consensus 78 -~~d~v~~~~~~~~-~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~------~v~riV~~SS~~a~~~~~~~~~~~~ 143 (297)
T PLN02583 78 -GCSGLFCCFDPPS-D-----YP-SYDEKMVDVEVRAAHNVLEACAQTD------TIEKVVFTSSLTAVIWRDDNISTQK 143 (297)
T ss_pred -CCCEEEEeCccCC-c-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC------CccEEEEecchHheecccccCCCCC
Confidence 4789999775432 1 11 2467899999999999999976531 24679999998775321 11
Q ss_pred ----------------ChhhhHHHHHHHHHHHHHHh-cccccCCCceEEEEeCCcccCccccccccccch--hHHhhcCC
Q psy616 386 ----------------SCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD--FYFKSSKQ 446 (1152)
Q Consensus 386 ----------------~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~--~~~~~~g~ 446 (1152)
...|+.+|...+.++....+ .++ ++++|..+..-+.+.......... ........
T Consensus 144 ~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi------~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~ 217 (297)
T PLN02583 144 DVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGV------NMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVL 217 (297)
T ss_pred CCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCC------cEEEEcCCcccCCCCCCchhhhcCCcccCcccCc
Confidence 01599999999988865543 333 788888776654433211000000 00011122
Q ss_pred CCCCHHHHHHHHHHHHhcC
Q psy616 447 KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 447 ~~l~~~e~~~~l~~~l~~~ 465 (1152)
..+..+++++++..++..+
T Consensus 218 ~~v~V~Dva~a~~~al~~~ 236 (297)
T PLN02583 218 VTVDVNFLVDAHIRAFEDV 236 (297)
T ss_pred ceEEHHHHHHHHHHHhcCc
Confidence 3567788888888887643
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.1e-10 Score=129.84 Aligned_cols=170 Identities=15% Similarity=0.131 Sum_probs=117.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~--~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||+|.||..++++|+++|.. |+++.|+. ..+.....+.. ...++.++.+|++|.+++.++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYT-VKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------ 76 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence 4789999999999999999999999885 44444443 22222222211 12468889999999988877765
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-CCC------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDF------ 384 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~-g~~------ 384 (1152)
.+|+|||+|+... .. . . +.+...+++|+.|+.++.+++.. ......||++||.++.. +.+
T Consensus 77 -~~d~vih~A~~~~-~~-~--~--~~~~~~~~~nv~gt~~ll~~~~~------~~~v~rvV~~SS~~~~~~~~~~~~~~~ 143 (322)
T PLN02986 77 -GCDAVFHTASPVF-FT-V--K--DPQTELIDPALKGTINVLNTCKE------TPSVKRVILTSSTAAVLFRQPPIEAND 143 (322)
T ss_pred -CCCEEEEeCCCcC-CC-C--C--CchhhhhHHHHHHHHHHHHHHHh------cCCccEEEEecchhheecCCccCCCCC
Confidence 4899999998643 21 1 1 12356789999999999998532 12346799999987542 211
Q ss_pred ---------------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccc
Q psy616 385 ---------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 429 (1152)
Q Consensus 385 ---------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 429 (1152)
....|+++|...+.+++...++. +.+++++..+..-+.++
T Consensus 144 ~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~-----~~~~~~lrp~~v~Gp~~ 198 (322)
T PLN02986 144 VVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN-----GIDMVVLNPGFICGPLL 198 (322)
T ss_pred CcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh-----CCeEEEEcccceeCCCC
Confidence 13569999999998887654431 23778888776654443
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.2e-10 Score=133.93 Aligned_cols=171 Identities=18% Similarity=0.188 Sum_probs=120.2
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~--~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++|||||+|.||..+++.|.++|..++++..|....... ..+.. .+.++.++.+|++|.+++.++++. ..+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 75 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNL-MSLAPVAQSERFAFEKVDICDRAELARVFTE-----HQP 75 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccch-hhhhhcccCCceEEEECCCcChHHHHHHHhh-----cCC
Confidence 4799999999999999999999998767666654322111 11111 234678889999999999888775 269
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcC--CCCCEEEEecCCcccc-----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK--NKLDFVCYFSSSSAIL----------- 381 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~--~~~~~iV~~SS~a~~~----------- 381 (1152)
|.|||+||... . ..+.++++..+++|+.|+.++.+++.+.|..+.. .....||++||.+.+-
T Consensus 76 D~Vih~A~~~~-~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E 150 (355)
T PRK10217 76 DCVMHLAAESH-V----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE 150 (355)
T ss_pred CEEEECCcccC-c----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence 99999998754 1 2344667889999999999999998765322211 1235788998854221
Q ss_pred --CCCCChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcc
Q psy616 382 --GDFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 382 --g~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 424 (1152)
+....+.|+.+|.+.+.+++...++ ++ +++.+..+..
T Consensus 151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~------~~~i~r~~~v 190 (355)
T PRK10217 151 TTPYAPSSPYSASKASSDHLVRAWLRTYGL------PTLITNCSNN 190 (355)
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHhCC------CeEEEeeeee
Confidence 1123567999999999999876443 33 6666665544
|
|
| >PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups [] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.2e-11 Score=105.99 Aligned_cols=67 Identities=25% Similarity=0.465 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHH
Q psy616 507 NDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYF 573 (1152)
Q Consensus 507 ~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L 573 (1152)
+.+++.|++++++++++|+++++|+++|+|||.++++..+|+++||+++++..+|++||+++|++||
T Consensus 1 e~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~~i 67 (67)
T PF00550_consen 1 EQLREIIAEVLGVDPEEIDPDTDFFDLGLDSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAEYI 67 (67)
T ss_dssp HHHHHHHHHHHTSSGGCTSTTSBTTTTTSSHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHHHH
T ss_pred CHHHHHHHHHHCcCHhhCCCCCCHHHhCCchHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHhHC
Confidence 3688999999999999999999999999999999999999999999999999999999999999986
|
The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A .... |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.7e-10 Score=135.39 Aligned_cols=176 Identities=13% Similarity=0.112 Sum_probs=122.1
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEe--cCCcch--------------HHHHHHHH-hCCCcEEEEEecCC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILS--GRSKLN--------------SIIYKKLK-KFNNKAIYIQVDVS 295 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~--~R~~~~--------------~~~~~~l~-~~g~~v~~~~~Dvs 295 (1152)
..+++++|||||+|.||..+++.|+++|..++++. .|+... .+..+.+. ..+.++.++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 34678899999999999999999999998655543 222110 01111111 12346889999999
Q ss_pred CHHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEec
Q psy616 296 DKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFS 375 (1152)
Q Consensus 296 d~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~S 375 (1152)
|.+.+.++++.. ++|.|||+|+... ......+.+++...+++|+.|+.++.+++... +...+||++|
T Consensus 124 d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~------gv~~~~V~~S 190 (442)
T PLN02572 124 DFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF------APDCHLVKLG 190 (442)
T ss_pred CHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh------CCCccEEEEe
Confidence 999998888763 6899999997643 34445566778888999999999999986432 1113689999
Q ss_pred CCccccCCC-------------------------CChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcccCcc
Q psy616 376 SSSAILGDF-------------------------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNSK 428 (1152)
Q Consensus 376 S~a~~~g~~-------------------------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~G 428 (1152)
|.+. +|.. ....|+.+|.+.+.+++..... ++ +++.+..+..-+.|
T Consensus 191 S~~v-YG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl------~~v~lR~~~vyGp~ 262 (442)
T PLN02572 191 TMGE-YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGI------RATDLNQGVVYGVR 262 (442)
T ss_pred ccee-cCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCC------CEEEEecccccCCC
Confidence 8753 2211 1247999999999888765443 44 77777665554433
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.5e-10 Score=131.46 Aligned_cols=163 Identities=20% Similarity=0.188 Sum_probs=117.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch--HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN--SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~--~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+|.||..+++.|+++|.. |+.+.|+... ......+...+.++.++.+|++|.+++.++++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 80 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID------- 80 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence 4688999999999999999999999975 4445554321 11122333223468889999999988877764
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC--------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------- 384 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-------- 384 (1152)
.+|.|||+|+... . ++...+++|+.|+.++.+++.. .....||++||.+++.|.+
T Consensus 81 ~~d~Vih~A~~~~-~---------~~~~~~~~nv~gt~~ll~aa~~-------~~v~r~V~~SS~~avyg~~~~~~~~~~ 143 (342)
T PLN02214 81 GCDGVFHTASPVT-D---------DPEQMVEPAVNGAKFVINAAAE-------AKVKRVVITSSIGAVYMDPNRDPEAVV 143 (342)
T ss_pred cCCEEEEecCCCC-C---------CHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEEeccceeeeccCCCCCCccc
Confidence 4899999998642 1 3567899999999999998642 2456799999987665421
Q ss_pred -------------CChhhhHHHHHHHHHHHHHHh-cccccCCCceEEEEeCCcccCcc
Q psy616 385 -------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNSK 428 (1152)
Q Consensus 385 -------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~G 428 (1152)
....|+.+|...+.+++...+ .++ +++.+..+..-+.+
T Consensus 144 ~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~------~~v~lRp~~vyGp~ 195 (342)
T PLN02214 144 DESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGV------DLVVLNPVLVLGPP 195 (342)
T ss_pred CcccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCC------cEEEEeCCceECCC
Confidence 123699999999999876543 344 77888876665544
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.3e-10 Score=132.92 Aligned_cols=159 Identities=18% Similarity=0.128 Sum_probs=111.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHH----hCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLK----KFNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~----~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
+++++|||||+|+||.++++.|+++|..++++..++.. .....+.+. ..+.++.++.+|++|.+++.++++.+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 82 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-- 82 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc--
Confidence 46889999999999999999999999865555443321 111122221 12356889999999999999888764
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-----
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----- 384 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~----- 384 (1152)
.+|.|||+||... .. ...+.....+++|+.|+.++.+++.+.+.+ ....-.||++||.+ ..|..
T Consensus 83 ---~~d~Vih~A~~~~-~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~--~~~~~~~v~~Ss~~-vyg~~~~~~~ 151 (340)
T PLN02653 83 ---KPDEVYNLAAQSH-VA----VSFEMPDYTADVVATGALRLLEAVRLHGQE--TGRQIKYYQAGSSE-MYGSTPPPQS 151 (340)
T ss_pred ---CCCEEEECCcccc-hh----hhhhChhHHHHHHHHHHHHHHHHHHHhccc--cccceeEEEeccHH-HhCCCCCCCC
Confidence 4899999999754 21 223345677889999999999998765321 11123688887753 33431
Q ss_pred ------CChhhhHHHHHHHHHHHHHHhc
Q psy616 385 ------GSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 385 ------g~~~Yaaana~l~~la~~~~~~ 406 (1152)
....|+.+|.+.+.+++..+.+
T Consensus 152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 179 (340)
T PLN02653 152 ETTPFHPRSPYAVAKVAAHWYTVNYREA 179 (340)
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 2457999999999999876654
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.6e-10 Score=129.55 Aligned_cols=219 Identities=20% Similarity=0.261 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC-CCCcccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL-KGPVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l-~GPs~tvdtaCs 796 (1152)
...++.+++.+||+++|+++++++ .+++|.....+. ....+.+|+..+|+ ..|.+.|+.+|+
T Consensus 48 ~~~l~~~a~~~aL~~ag~~~~~Id----~li~~~~~~~~~-------------~~~~~~~i~~~lg~~~~~~~~v~~~C~ 110 (324)
T cd00827 48 VPTMAVEAARRALERAGIDPDDIG----LLIVATESPIDK-------------GKSAATYLAELLGLTNAEAFDLKQACY 110 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CccHHHHHHHHcCCCCCceeehhhhhH
Confidence 356889999999999999988877 677776543221 12356789999999 579999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||+.|++.|++|.++.+||+|++.+..... +...++++.|+|+++++|++.++..
T Consensus 111 s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~-------------------~~~~~~~~~gdgaaA~ll~~~~~~~-- 169 (324)
T cd00827 111 GGTAALQLAANLVESGPWRYALVVASDIASYLLD-------------------EGSALEPTLGDGAAAMLVSRNPGIL-- 169 (324)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhccc-------------------CCCCccccccCceEEEEEecCcccc--
Confidence 9999999999999999999999999997432211 3456889999999999999865431
Q ss_pred CCceEEEEEEEEEec--------CC-CCC--------CCCCC---------CHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy616 877 GDPIHAIIRGSGINY--------DG-KTN--------GITAP---------NGISQTELIKSVYKKSNLNPEDINYIITH 930 (1152)
Q Consensus 877 gd~i~avI~g~a~~~--------dG-~~~--------~~~~P---------~~~~q~~~i~~al~~Agi~p~dI~yve~h 930 (1152)
+..|......+.... ++ ... .+... .......+++++++++|++ +||+|+-.|
T Consensus 170 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h 248 (324)
T cd00827 170 AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPH 248 (324)
T ss_pred cCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc-cccceeecc
Confidence 123333222211110 00 000 01011 0234467889999999999 999999999
Q ss_pred CCCC-CCCCHHHHHHHHHHhcccCCCCCceeee--ccCCCCCccccchhhHHHHHH
Q psy616 931 GTGT-KLGDPVEINALHDVFKNKTYNQKFCAIT--SNKSNIGHTFAASGLVSLINL 983 (1152)
Q Consensus 931 gtgT-~~gD~~E~~al~~~f~~~~~~~~~~~ig--svKsniGH~~~AaG~~~lik~ 983 (1152)
-.+- ..-+.+ .+.++-.. ..+... ..-..+||+.+|+=...|-..
T Consensus 249 ~~~~~~~~~~~-----~~~l~~~~---~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~ 296 (324)
T cd00827 249 QPNGKKILEAV-----AKKLGGPP---EKASQTRWILLRRVGNMYAASILLGLASL 296 (324)
T ss_pred CchHHHHHHHH-----HHHccchH---hhhccchhhHHHHhCchHHHHHHHHHHHH
Confidence 7765 322222 22222100 001111 245678999988766655543
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.4e-10 Score=129.81 Aligned_cols=152 Identities=20% Similarity=0.300 Sum_probs=109.6
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHH----hCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLK----KFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~----~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
++++|||||+|+||..++++|+++|.. |+++.|.. ........+. ..+.++.++.+|++|++++..+++..
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--- 80 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYK-VVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST--- 80 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC---
Confidence 578999999999999999999999875 44444432 2222122222 12446788999999999998887652
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------ 384 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------ 384 (1152)
.+|.|||+||... .. .+.+++...+++|+.++.++.+++. ......||++||. +..|..
T Consensus 81 --~~d~vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~~v~~Ss~-~vyg~~~~~~~~ 145 (352)
T PLN02240 81 --RFDAVIHFAGLKA-VG----ESVAKPLLYYDNNLVGTINLLEVMA-------KHGCKKLVFSSSA-TVYGQPEEVPCT 145 (352)
T ss_pred --CCCEEEEccccCC-cc----ccccCHHHHHHHHHHHHHHHHHHHH-------HcCCCEEEEEccH-HHhCCCCCCCCC
Confidence 6999999998753 21 1334567899999999999998742 2234679999995 333321
Q ss_pred ------CChhhhHHHHHHHHHHHHHHhc
Q psy616 385 ------GSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 385 ------g~~~Yaaana~l~~la~~~~~~ 406 (1152)
....|+.+|.+.+.+++.....
T Consensus 146 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 173 (352)
T PLN02240 146 EEFPLSATNPYGRTKLFIEEICRDIHAS 173 (352)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3468999999999999876543
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.8e-10 Score=126.02 Aligned_cols=210 Identities=23% Similarity=0.352 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCs 796 (1152)
..-+..+++.+||++||+++++++ -+++.+.+.++. ....|.+|...||+++ +.+-+.++||
T Consensus 52 ~s~la~~Aa~~AL~~Agi~~~dID----lII~aT~tpd~~-------------~Ps~A~~vq~~LG~~~~~afDl~aaCs 114 (323)
T COG0332 52 TSDLAVEAARKALEDAGISPDDID----LIIVATSTPDHL-------------FPSTACLVQARLGLGGAPAFDLQAACS 114 (323)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCcccC-------------CChHHHHHHHHhCCCCcceeechhhhH
Confidence 456889999999999999999887 667776655432 1236889999999998 9999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
+.+.||..|.+.|++|..+.+||.|.+.+ .+.+- |+++...+.+|+|+|+|||++-+ +
T Consensus 115 gf~yaL~~A~~~i~sG~~k~vLVVg~e~~-----------S~~ld-------~~dR~t~vlFgDGAgAvvl~~~~----~ 172 (323)
T COG0332 115 GFLYALSVADGLIRSGGYKNVLVVGAETL-----------SRILD-------WTDRDTCVLFGDGAGAVVLEATE----D 172 (323)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEehhHh-----------hccCC-------HhhccceEEEcCCceEEEEecCC----C
Confidence 99999999999999999999999999984 11222 33346778899999999999876 1
Q ss_pred CCceEEEEEEEEEecCCCCC-------------------CCCCC--------CHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy616 877 GDPIHAIIRGSGINYDGKTN-------------------GITAP--------NGISQTELIKSVYKKSNLNPEDINYIIT 929 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~~~-------------------~~~~P--------~~~~q~~~i~~al~~Agi~p~dI~yve~ 929 (1152)
...|+ .+....||... +...- ....+.++++++|++++++++||||+-.
T Consensus 173 ~~~i~----~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vp 248 (323)
T COG0332 173 DNGIL----DTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVP 248 (323)
T ss_pred CcCee----eeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcc
Confidence 11222 22222222110 00010 1345578899999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHH
Q psy616 930 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSL 980 (1152)
Q Consensus 930 hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~l 980 (1152)
|=..-. =++++.+-++-.. .+. +- .--..|++-+||=...|
T Consensus 249 HQan~r-----i~~~i~~~l~~~~--~k~--~~-~~~~yGNtsaAsiplaL 289 (323)
T COG0332 249 HQANLR-----IIEAIAKKLGIPE--EKV--VV-TVDKYGNTSAASIPLAL 289 (323)
T ss_pred ccccHH-----HHHHHHHHcCCCH--HHH--hh-HHHHhcccccchHHHHH
Confidence 944322 2334444444311 111 11 22235887777644444
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.1e-09 Score=127.21 Aligned_cols=165 Identities=21% Similarity=0.170 Sum_probs=113.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++|||||+|.||..++++|+++|.. |+++.|+.........+... ..++.++.+|++|.+++.+++. .
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 80 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYA-VNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------G 80 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCE-EEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------c
Confidence 688999999999999999999999985 44444443222111111111 1257889999999988877654 4
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC----------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---------- 383 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~---------- 383 (1152)
+|.|||+|+... . .. .+.+...+++|+.|+.++.+++... ...+.||++||.+.+-+.
T Consensus 81 ~d~vih~A~~~~-~---~~--~~~~~~~~~~nv~g~~~ll~a~~~~------~~~~~~v~~SS~~~~g~~~~~~~~~~~~ 148 (338)
T PLN00198 81 CDLVFHVATPVN-F---AS--EDPENDMIKPAIQGVHNVLKACAKA------KSVKRVILTSSAAAVSINKLSGTGLVMN 148 (338)
T ss_pred CCEEEEeCCCCc-c---CC--CChHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEeecceeeeccCCCCCCceec
Confidence 799999998532 1 11 1234567899999999999986431 234689999997654311
Q ss_pred --------------CCChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcccC
Q psy616 384 --------------FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 384 --------------~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 426 (1152)
+....|+.+|.+.+.+++....+ ++ +++.+..+..-+
T Consensus 149 E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~------~~~~~R~~~vyG 200 (338)
T PLN00198 149 EKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNI------DLITVIPTLMAG 200 (338)
T ss_pred cccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCc------eEEEEeCCceEC
Confidence 12346999999999998875543 33 777777655543
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.9e-10 Score=128.26 Aligned_cols=167 Identities=15% Similarity=0.121 Sum_probs=113.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCC--CcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN--NKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g--~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+.+++|||||+|.||..+++.|+++|..++++..+..........+...+ .++.++.+|++|.+.+.++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence 46789999999999999999999998855544433222222222222112 357889999999988877764
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC--------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------- 384 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-------- 384 (1152)
.+|.|||+|+... .. .. +.+...+++|+.|+.+|.+++.+. .....||++||.....+..
T Consensus 77 ~~d~ViH~A~~~~-~~---~~--~~~~~~~~~Nv~gt~~ll~aa~~~------~~~~r~v~~SS~~~~~~~~~~~~~~~E 144 (351)
T PLN02650 77 GCTGVFHVATPMD-FE---SK--DPENEVIKPTVNGMLSIMKACAKA------KTVRRIVFTSSAGTVNVEEHQKPVYDE 144 (351)
T ss_pred CCCEEEEeCCCCC-CC---CC--CchhhhhhHHHHHHHHHHHHHHhc------CCceEEEEecchhhcccCCCCCCccCc
Confidence 3799999998543 11 11 223567899999999999996542 1245799999975443210
Q ss_pred --------------CChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcccC
Q psy616 385 --------------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 --------------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+.+|.+.+.+++....+ ++ +++.+..+..-+
T Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~ilRp~~v~G 195 (351)
T PLN02650 145 DCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGL------DFISIIPTLVVG 195 (351)
T ss_pred ccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCC------eEEEECCCceEC
Confidence 1136999999999998776543 33 777776654433
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-09 Score=124.14 Aligned_cols=168 Identities=14% Similarity=0.133 Sum_probs=113.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh---CCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK---FNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~---~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||+|.||..+++.|+++|..++++..+...... ...+.. ...++.++.+|++|.+++..+++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKK-TEHLLALDGAKERLHLFKANLLEEGSFDSVVD------ 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhh-HHHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence 46889999999999999999999999855544433322222 222221 12468889999999988776664
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-cCC-C-----
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGD-F----- 384 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-~g~-~----- 384 (1152)
.+|.|||+|+... .. . ... ....+++|+.|+.++.+++... .....||++||.++. .+. +
T Consensus 76 -~~d~Vih~A~~~~-~~-~--~~~--~~~~~~~nv~gt~~ll~a~~~~------~~~~~~v~~SS~~~~~y~~~~~~~~~ 142 (322)
T PLN02662 76 -GCEGVFHTASPFY-HD-V--TDP--QAELIDPAVKGTLNVLRSCAKV------PSVKRVVVTSSMAAVAYNGKPLTPDV 142 (322)
T ss_pred -CCCEEEEeCCccc-CC-C--CCh--HHHHHHHHHHHHHHHHHHHHhC------CCCCEEEEccCHHHhcCCCcCCCCCC
Confidence 4799999998643 11 1 111 2467899999999999985421 134579999997642 221 1
Q ss_pred ---------------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCc
Q psy616 385 ---------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 427 (1152)
Q Consensus 385 ---------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 427 (1152)
....|+.+|...+.+++...++ .+.+++.+..+..-+.
T Consensus 143 ~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lRp~~v~Gp 195 (322)
T PLN02662 143 VVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE-----NGIDMVTINPAMVIGP 195 (322)
T ss_pred cCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH-----cCCcEEEEeCCcccCC
Confidence 0147999999998888755432 1237777777665543
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.2e-09 Score=126.02 Aligned_cols=239 Identities=19% Similarity=0.262 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
..+..+++.+||+++|+++++++ .|++|+...++. .+ .+.++...+++++ |++.|..+|+|
T Consensus 52 ~~la~~A~~~aL~~ag~~~~dId----~vi~~s~~~~~~---------~~-----~~~~v~~~Lg~~~~~~~~v~~~Cas 113 (326)
T CHL00203 52 TKLAAEAANKALDKAHMDPLEID----LIILATSTPDDL---------FG-----SASQLQAEIGATRAVAFDITAACSG 113 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC---------Cc-----hHHHHHHHhCCCCCceeeecccchh
Confidence 56889999999999999988876 577775443211 01 1346888889876 77899999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCC
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 877 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dg 877 (1152)
++.||+.|.+.|++|.++.+||.|++.+. .. +. ++...+.++.|+|++++||++.+.
T Consensus 114 g~~al~~A~~~i~sg~~~~~Lvv~~e~~s-~~----------~~-------~~~~~~~~~fgDga~A~ll~~~~~----- 170 (326)
T CHL00203 114 FILALVTATQFIQNGSYKNILVVGADTLS-KW----------ID-------WSDRKTCILFGDGAGAAIIGASYE----- 170 (326)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhh-Cc----------CC-------cccCCceEEEcceeeEEEEEEcCC-----
Confidence 99999999999999999999999998731 11 11 122235688999999999986432
Q ss_pred CceEEEEEEEEEecCCCCC----------------CCCCCC---------H--------HHHHHHHHHHHHHcCCCCCCc
Q psy616 878 DPIHAIIRGSGINYDGKTN----------------GITAPN---------G--------ISQTELIKSVYKKSNLNPEDI 924 (1152)
Q Consensus 878 d~i~avI~g~a~~~dG~~~----------------~~~~P~---------~--------~~q~~~i~~al~~Agi~p~dI 924 (1152)
..|. ++....||+.. ....|. + ....++++++|+++|++++||
T Consensus 171 ~~~~----~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~~di 246 (326)
T CHL00203 171 NSIL----GFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISIDEV 246 (326)
T ss_pred CCeE----EEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 1222 22222222110 001111 0 113357899999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcc
Q psy616 925 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 1004 (1152)
Q Consensus 925 ~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~ 1004 (1152)
+++-.|-.+.+. .+++.+.++-...+ +. .+=.+.||+.+|+=...|-.+ +++|.+.|
T Consensus 247 d~~~~hq~~~~~-----~~~~~~~lgl~~~k---~~--~~l~~~Gn~~sasi~~~L~~~---~~~g~~~~---------- 303 (326)
T CHL00203 247 DWFILHQANKRI-----LEAIANRLSVPNSK---MI--TNLEKYGNTSAASIPLALDEA---IQNNKIQP---------- 303 (326)
T ss_pred CEEEECCCCHHH-----HHHHHHHhCCCHHH---hh--hHHHhhCcHHHHHHHHHHHHH---HHhCCCCC----------
Confidence 999999777553 33455555432211 11 123578999987765555443 34443321
Q ss_pred cccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1005 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1005 i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
-.+.++-+||.|=+-..++++
T Consensus 304 -----------------------Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 304 -----------------------GQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred -----------------------CCEEEEEEEchhhhheEEEEE
Confidence 134567889988777777775
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.4e-10 Score=128.51 Aligned_cols=172 Identities=18% Similarity=0.207 Sum_probs=136.7
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchH-HHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS-IIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~-~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
.+-.+|++|||||+|.||.++|+++++.+.+++++.+|++... ....+++.. ..++.++-+||.|.+.+..+++..
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~- 324 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH- 324 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence 3457999999999999999999999999999999999997653 445566553 367888999999999998888653
Q ss_pred hhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 309 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 309 ~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
++|.|+|+|..-. -|+.+..+ .+.+.+|+.|+.|+.+++.. .....||++|+=-+..+. ..
T Consensus 325 ----kvd~VfHAAA~KH--VPl~E~nP---~Eai~tNV~GT~nv~~aa~~-------~~V~~~V~iSTDKAV~Pt---Nv 385 (588)
T COG1086 325 ----KVDIVFHAAALKH--VPLVEYNP---EEAIKTNVLGTENVAEAAIK-------NGVKKFVLISTDKAVNPT---NV 385 (588)
T ss_pred ----CCceEEEhhhhcc--CcchhcCH---HHHHHHhhHhHHHHHHHHHH-------hCCCEEEEEecCcccCCc---hH
Confidence 7999999998644 45555554 35789999999999999643 367789999998777553 57
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
|+++|...+.+.++.+.... +.+++..++-.|..-
T Consensus 386 mGaTKr~aE~~~~a~~~~~~--~~~T~f~~VRFGNVl 420 (588)
T COG1086 386 MGATKRLAEKLFQAANRNVS--GTGTRFCVVRFGNVL 420 (588)
T ss_pred hhHHHHHHHHHHHHHhhccC--CCCcEEEEEEeccee
Confidence 99999999999998876432 124677888887663
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.5e-09 Score=127.59 Aligned_cols=242 Identities=18% Similarity=0.222 Sum_probs=157.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCs 796 (1152)
..-|..+++.+||+++|+++++++ -+++++...++. . -.+..+...+|+++ |++.|..+|+
T Consensus 96 ~~~La~~Aa~~aL~~agi~~~dId----~li~~s~~~~~~---------~-----~~a~~v~~~LG~~~~~~~dv~~~Ca 157 (379)
T PLN02326 96 LTSLAVEAAKKALEMAGVDPEDVD----LVLLCTSSPDDL---------F-----GSAPQVQAALGCTNALAFDLTAACS 157 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCcc---------C-----cHHHHHHHHhCCCCCceeeccccch
Confidence 457889999999999999887765 455554433211 0 13556888899976 6788999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||++|.+.|++|.++.+||+|++.+.. .+ .|+...+..++|+|++++||++.+...
T Consensus 158 ~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~-----------~~-------~~~d~~~~~lfGDGAaAvlL~~~~~~~-- 217 (379)
T PLN02326 158 GFVLGLVTAARFIRGGGYKNVLVIGADALSR-----------YV-------DWTDRGTCILFGDGAGAVVLQACDDDE-- 217 (379)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEechhcC-----------CC-------CccccCceEEEcceeEEEEEEEcCCCC--
Confidence 9999999999999999999999999987321 11 123345567899999999999754321
Q ss_pred CCceEEEEEEEEEecCCCC------------------------------CCC--CCCCH--------HHHHHHHHHHHHH
Q psy616 877 GDPIHAIIRGSGINYDGKT------------------------------NGI--TAPNG--------ISQTELIKSVYKK 916 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~~------------------------------~~~--~~P~~--------~~q~~~i~~al~~ 916 (1152)
..+.. +.+.++|.. .++ ...++ ....++++++|++
T Consensus 218 -~~i~~----~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~ 292 (379)
T PLN02326 218 -DGLLG----FDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQK 292 (379)
T ss_pred -CceEE----EEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 12222 111111100 000 00011 1123578899999
Q ss_pred cCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCC
Q psy616 917 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASL 996 (1152)
Q Consensus 917 Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~ 996 (1152)
+|++++||+|+-.|-.+-.+- +.+.+.++-... .+. -.+ ..+||+.+|+=...|-..+ +.+.+-
T Consensus 293 ~gl~~~dId~~v~Hq~n~~~~-----~~~~~~Lgl~~e---k~~-~~l-~~~GNt~sAsi~~~L~~~~---~~g~~~--- 356 (379)
T PLN02326 293 AGLTAESIDWLLLHQANQRII-----DAVAQRLGIPPE---KVI-SNL-ANYGNTSAASIPLALDEAV---RSGKVK--- 356 (379)
T ss_pred cCCCHHHCCEEEECCCCHHHH-----HHHHHHcCCCHH---Hee-ecH-hhcCcHHHHHHHHHHHHHH---HcCCCC---
Confidence 999999999999997765432 234555543211 122 234 5889999887666554432 232210
Q ss_pred CCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 997 HCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 997 ~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+-.+.++.+||.|-+-..++|+
T Consensus 357 ------------------------------~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 357 ------------------------------KGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred ------------------------------CCCEEEEEEEChhheeeEEEEE
Confidence 1134578889998888888875
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.2e-09 Score=116.61 Aligned_cols=206 Identities=19% Similarity=0.150 Sum_probs=143.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHH---HHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSI---IYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~---~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+++|+||||+|=||..+++.|+++|..+... .|++..++ .+.+|+..+.+...+.+|++|++++.++++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gt-VR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------ 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGT-VRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID------ 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEE-EcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh------
Confidence 57899999999999999999999999965544 45544333 355566556678999999999999888876
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-C--C---
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F--G--- 385 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-~--g--- 385 (1152)
..|||||.|.... . ...+ -=.+.+++.+.|+.++.+++.. ......||+.||++++..+ + +
T Consensus 78 -gcdgVfH~Asp~~-~---~~~~--~e~~li~pav~Gt~nVL~ac~~------~~sVkrvV~TSS~aAv~~~~~~~~~~~ 144 (327)
T KOG1502|consen 78 -GCDGVFHTASPVD-F---DLED--PEKELIDPAVKGTKNVLEACKK------TKSVKRVVYTSSTAAVRYNGPNIGENS 144 (327)
T ss_pred -CCCEEEEeCccCC-C---CCCC--cHHhhhhHHHHHHHHHHHHHhc------cCCcceEEEeccHHHhccCCcCCCCCc
Confidence 3899999997544 1 1111 1236899999999999999642 2357889999999998765 1 1
Q ss_pred ----------------ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhH---Hh----
Q psy616 386 ----------------SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFY---FK---- 442 (1152)
Q Consensus 386 ----------------~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~---~~---- 442 (1152)
...|+.+|..-+.-|.....++ +...++||++..-+.++........... ++
T Consensus 145 vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~-----~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~ 219 (327)
T KOG1502|consen 145 VVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN-----GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAE 219 (327)
T ss_pred ccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-----CccEEEecCCceECCCcccccchhHHHHHHHHhcccc
Confidence 1248888887777776666553 4488999999998777654222111111 11
Q ss_pred ---hcCCCCCCHHHHHHHHHHHHhcC
Q psy616 443 ---SSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 443 ---~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
...+..+..++.+.+...++..+
T Consensus 220 ~~~n~~~~~VdVrDVA~AHv~a~E~~ 245 (327)
T KOG1502|consen 220 TYPNFWLAFVDVRDVALAHVLALEKP 245 (327)
T ss_pred cCCCCceeeEeHHHHHHHHHHHHcCc
Confidence 11112356677777777776655
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.8e-09 Score=126.19 Aligned_cols=169 Identities=18% Similarity=0.212 Sum_probs=116.9
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+|||||+|.||..+++.|+++|...++.+.+...... ...+... +.++.++.+|++|.+++.+++++ ..+|
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d 75 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN-LESLADVSDSERYVFEHADICDRAELDRIFAQ-----HQPD 75 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch-HHHHHhcccCCceEEEEecCCCHHHHHHHHHh-----cCCC
Confidence 48999999999999999999999876665555321111 1112211 34577899999999999888875 2699
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCC--CCCEEEEecCCccccCC----------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN--KLDFVCYFSSSSAILGD---------- 383 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~--~~~~iV~~SS~a~~~g~---------- 383 (1152)
.|||+||... .. ...+..+..+++|+.|+.++.+++.+.|++.... ....||++||.+.+ |.
T Consensus 76 ~vih~A~~~~-~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vy-g~~~~~~~~~~~ 149 (352)
T PRK10084 76 AVMHLAAESH-VD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVY-GDLPHPDEVENS 149 (352)
T ss_pred EEEECCcccC-Cc----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhc-CCCCcccccccc
Confidence 9999998754 21 1122346689999999999999988765432211 23468889886432 21
Q ss_pred ------------CCChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcc
Q psy616 384 ------------FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 384 ------------~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 424 (1152)
.....|+.+|.+.+.+++...+. +. +.+.+..+..
T Consensus 150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~------~~vilr~~~v 197 (352)
T PRK10084 150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGL------PTIVTNCSNN 197 (352)
T ss_pred ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCC------CEEEEeccce
Confidence 12358999999999999876543 33 6666665433
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.7e-09 Score=124.41 Aligned_cols=165 Identities=15% Similarity=0.212 Sum_probs=114.9
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
+|||||+|.||..+++.|.++|..++ +..|. .........+...+ .+.++.+|+++.+++.++++. +++|.|
T Consensus 2 vlV~GatG~iG~~l~~~l~~~g~~V~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~-----~~~d~v 74 (328)
T TIGR01179 2 ILVTGGAGYIGSHTVRQLLESGHEVV-VLDNLSNGSPEALKRGERIT-RVTFVEGDLRDRELLDRLFEE-----HKIDAV 74 (328)
T ss_pred EEEeCCCCHHHHHHHHHHHhCCCeEE-EEeCCCccchhhhhhhcccc-ceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence 79999999999999999999988654 44443 22222222232222 577889999999999888763 479999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------------C
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------G 385 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------------g 385 (1152)
||+||... ... +.++....+..|+.++.++.+++. +.....||++||... .|.. .
T Consensus 75 v~~ag~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~~v~~ss~~~-~g~~~~~~~~e~~~~~~ 141 (328)
T TIGR01179 75 IHFAGLIA-VGE----SVQDPLKYYRNNVVNTLNLLEAMQ-------QTGVKKFIFSSSAAV-YGEPSSIPISEDSPLGP 141 (328)
T ss_pred EECccccC-cch----hhcCchhhhhhhHHHHHHHHHHHH-------hcCCCEEEEecchhh-cCCCCCCCccccCCCCC
Confidence 99999754 221 223445678899999999998743 223467888888643 3332 2
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCc
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 427 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 427 (1152)
...|+.+|+.++.+.+....+. .+.+++.+.++.+-+.
T Consensus 142 ~~~y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 142 INPYGRSKLMSERILRDLSKAD----PGLSYVILRYFNVAGA 179 (328)
T ss_pred CCchHHHHHHHHHHHHHHHHhc----cCCCEEEEecCcccCC
Confidence 3679999999999888775431 1347788887666543
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.08 E-value=2e-09 Score=125.33 Aligned_cols=154 Identities=18% Similarity=0.122 Sum_probs=106.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc--hHHHHHHHHh-----CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--NSIIYKKLKK-----FNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~--~~~~~~~l~~-----~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
+++|||||+|.||..+++.|+++|..++++ .|+.. .......+.. .+..+.++.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGL-IRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEE-ecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC--
Confidence 579999999999999999999999855444 45432 1111222211 1345889999999999998888764
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC------
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------ 383 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~------ 383 (1152)
++|.|||+|+... ... ..+.-...+++|+.|+.++.+++.+. .-.....||++||.+- .|.
T Consensus 78 ---~~d~ViH~Aa~~~-~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~----~~~~~~~~v~~SS~~v-yg~~~~~~~ 144 (343)
T TIGR01472 78 ---KPTEIYNLAAQSH-VKV----SFEIPEYTADVDGIGTLRLLEAVRTL----GLIKSVKFYQASTSEL-YGKVQEIPQ 144 (343)
T ss_pred ---CCCEEEECCcccc-cch----hhhChHHHHHHHHHHHHHHHHHHHHh----CCCcCeeEEEeccHHh-hCCCCCCCC
Confidence 5899999999754 211 11222456778999999999987542 1111125888888643 332
Q ss_pred ------CCChhhhHHHHHHHHHHHHHHhc
Q psy616 384 ------FGSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 384 ------~g~~~Yaaana~l~~la~~~~~~ 406 (1152)
.....|+++|.+.+.+++..+++
T Consensus 145 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 173 (343)
T TIGR01472 145 NETTPFYPRSPYAAAKLYAHWITVNYREA 173 (343)
T ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 13468999999999999877554
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.7e-09 Score=121.97 Aligned_cols=241 Identities=18% Similarity=0.165 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEec-cCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE-EGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~-~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaC 795 (1152)
..-+..+++.+||+++|+++++++ .+++..+ ..++. . ...+.+|...+|+++ |++.|..+|
T Consensus 53 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~~~~~~~~~--------~-----p~~a~~l~~~lGl~~~~~~~v~~~C 115 (339)
T PRK06840 53 TSDMAIAAAKPALKQAGVDPAAID----VVIYIGSEHKDYP--------V-----WSSAPKIQHEIGAKNAWAFDIMAVC 115 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCCCCC--------C-----CchHHHHHHHhCCCCcccccccccc
Confidence 467888999999999999988775 4443322 21110 1 123578999999975 888899999
Q ss_pred hhHHHHHHHHHHHHHc-CCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCc--ccccccEEEEEcccch
Q psy616 796 SSSLVATHIACQSLRQ-HECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGL--VPSEAVVAVVLKRLSR 872 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~-G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~--v~gEG~~~vvLk~l~~ 872 (1152)
+|++.||..|++.|++ |.++.+||.+.+.... .+. |+....++ ..|+|++++||++...
T Consensus 116 ~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~-----------~~~-------~~~~~~~~~~~~GDgAaA~ll~~~~~ 177 (339)
T PRK06840 116 ASFPIALKVAKDLLYSDPSIENVLLVGGYRNSD-----------LVD-------YDNPRTRFMFNFAAGGSAALLKKDAG 177 (339)
T ss_pred hHHHHHHHHHHHHHhcCCCccEEEEEeeccccc-----------ccC-------cCCCCeeeeccCCCceeEEEEEecCC
Confidence 9999999999999999 9999999888764211 011 11122332 3699999999986432
Q ss_pred hhcCCCceEEEEEEEEEecCCCC-C-------CC------------------CCCCH----------HHHHHHHHHHHHH
Q psy616 873 ALSDGDPIHAIIRGSGINYDGKT-N-------GI------------------TAPNG----------ISQTELIKSVYKK 916 (1152)
Q Consensus 873 A~~dgd~i~avI~g~a~~~dG~~-~-------~~------------------~~P~~----------~~q~~~i~~al~~ 916 (1152)
+..|. ++...+|+.. . +. ..|+. ....++++++|++
T Consensus 178 ----~~~il----~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 249 (339)
T PRK06840 178 ----KNRIL----GSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRK 249 (339)
T ss_pred ----CCceE----EEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 22332 2222222210 0 00 00110 1235789999999
Q ss_pred cCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCC
Q psy616 917 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASL 996 (1152)
Q Consensus 917 Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~ 996 (1152)
+|++++||+|+-.|-.+... .+.+.+.++-...+ .. +...+||+.+|+=...|-.. ++.+.+.|
T Consensus 250 ~gl~~~did~~~~h~~~~~~-----~~~~~~~Lgl~~~~---~~---~~~~~Gn~~sas~~~~L~~~---~~~~~~~~-- 313 (339)
T PRK06840 250 SGYTPKDIDYLAILHMKRSA-----HIALLEGLGLTEEQ---AI---YLDEYGHLGQLDQILSLHLA---LEQGKLKD-- 313 (339)
T ss_pred cCCCHHHCCEEEECCcCHHH-----HHHHHHHcCCCHHH---eE---eHHhccchhhhhHHHHHHHH---HHcCCCCC--
Confidence 99999999998887554332 23455555432211 22 24589999988766666433 23322111
Q ss_pred CCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 997 HCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 997 ~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
-.+.++.+||.|.+-..++|+
T Consensus 314 -------------------------------Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 314 -------------------------------GDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred -------------------------------CCEEEEEEEehhhheeEEEEE
Confidence 124578899999999999887
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.5e-09 Score=121.97 Aligned_cols=151 Identities=17% Similarity=0.309 Sum_probs=106.9
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
.+|||||+|.||..+++.|+++|..++++..+..........+... +.++.++.+|++|.+++.++++. .++|.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~ 76 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT 76 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence 5899999999999999999999986655543322222222223322 34577889999999988887753 36999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-------------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------------- 383 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~------------- 383 (1152)
|||+||... ... ..+.....+.+|+.++.++.+++. ......||++||... .|.
T Consensus 77 vvh~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~~v~~Ss~~~-yg~~~~~~~~E~~~~~ 143 (338)
T PRK10675 77 VIHFAGLKA-VGE----SVQKPLEYYDNNVNGTLRLISAMR-------AANVKNLIFSSSATV-YGDQPKIPYVESFPTG 143 (338)
T ss_pred EEECCcccc-ccc----hhhCHHHHHHHHHHHHHHHHHHHH-------HcCCCEEEEeccHHh-hCCCCCCccccccCCC
Confidence 999998754 221 123345678999999999998743 224567999999643 221
Q ss_pred CCChhhhHHHHHHHHHHHHHHhc
Q psy616 384 FGSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 384 ~g~~~Yaaana~l~~la~~~~~~ 406 (1152)
.....|+.+|.+.+.+++...+.
T Consensus 144 ~p~~~Y~~sK~~~E~~~~~~~~~ 166 (338)
T PRK10675 144 TPQSPYGKSKLMVEQILTDLQKA 166 (338)
T ss_pred CCCChhHHHHHHHHHHHHHHHHh
Confidence 12578999999999999887543
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.5e-09 Score=119.78 Aligned_cols=165 Identities=18% Similarity=0.211 Sum_probs=114.1
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHHHhC--C--C--cEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKKF--N--N--KAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~-~~~~~~l~~~--g--~--~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+|||||+|.||.+++++|++.+.+.|++++|++.. -.+.++++.. + . .+..+.+|+.|.+.+..++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence 69999999999999999999999999999998643 3444555321 2 2 2345678999999888777542
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
++|.|||+|..-. -++.+..+ .+.+.+|+.|+.++.+++.. .....||++|+=-+.-+ -..|++
T Consensus 77 -~pdiVfHaAA~Kh--Vpl~E~~p---~eav~tNv~GT~nv~~aa~~-------~~v~~~v~ISTDKAv~P---tnvmGa 140 (293)
T PF02719_consen 77 -KPDIVFHAAALKH--VPLMEDNP---FEAVKTNVLGTQNVAEAAIE-------HGVERFVFISTDKAVNP---TNVMGA 140 (293)
T ss_dssp -T-SEEEE--------HHHHCCCH---HHHHHHHCHHHHHHHHHHHH-------TT-SEEEEEEECGCSS-----SHHHH
T ss_pred -CCCEEEEChhcCC--CChHHhCH---HHHHHHHHHHHHHHHHHHHH-------cCCCEEEEccccccCCC---CcHHHH
Confidence 7999999998643 45556555 45799999999999999653 35778999999776654 368999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
+|...+.+....+.... ...++..++-.|..-
T Consensus 141 tKrlaE~l~~~~~~~~~--~~~t~f~~VRFGNVl 172 (293)
T PF02719_consen 141 TKRLAEKLVQAANQYSG--NSDTKFSSVRFGNVL 172 (293)
T ss_dssp HHHHHHHHHHHHCCTSS--SS--EEEEEEE-EET
T ss_pred HHHHHHHHHHHHhhhCC--CCCcEEEEEEeccee
Confidence 99999999988876542 335688888887654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >KOG1406|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=5.8e-10 Score=116.19 Aligned_cols=246 Identities=20% Similarity=0.250 Sum_probs=162.4
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-CcccccccchhHHH
Q psy616 722 LLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSSSLV 800 (1152)
Q Consensus 722 ~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsSsl~ 800 (1152)
.-|+...||.|||+..+++...-+|-..|-+ ....|.-|..|++| |.+.|+..|+++..
T Consensus 33 a~ea~tkal~da~ikys~vqqa~vgyvfgds--------------------tcgqraiyevgmtgipi~nvnnncatgss 92 (408)
T KOG1406|consen 33 AKEAITKALQDAGIKYSEVQQAVVGYVFGDS--------------------TCGQRAIYEVGMTGIPIYNVNNNCATGSS 92 (408)
T ss_pred HHHHHHHHHHhcCCCHHHHHhhhheeeecCC--------------------ccchHHHHhccccCcceeeccCccccCch
Confidence 3467789999999998888766667666532 23457778999999 99999999999999
Q ss_pred HHHHHHHHHHcCCCCEEEEeccccCcCH-------------HHHH-HHHhcCCCC-------------------------
Q psy616 801 ATHIACQSLRQHECDTAISAGVNLMISP-------------EAYI-AMTSAGMLS------------------------- 841 (1152)
Q Consensus 801 Al~~A~~~l~~G~~d~alvgGv~~~~~~-------------~~~~-~~~~~g~ls------------------------- 841 (1152)
||.+|.+.|.+|..|.+|+-|.+-+..- +..+ .++..--|+
T Consensus 93 alflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfgnagkehmekygtk~e 172 (408)
T KOG1406|consen 93 ALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFGNAGKEHMEKYGTKPE 172 (408)
T ss_pred HHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhhhhHHHHHHHhCCCHH
Confidence 9999999999999999999998863211 0000 000000000
Q ss_pred ----------CCCCcccCCCCCCCccc---------------------ccccEEEEEcccchhhcCCCceEE-EEEEEEE
Q psy616 842 ----------PDGKCYVFDERANGLVP---------------------SEAVVAVVLKRLSRALSDGDPIHA-IIRGSGI 889 (1152)
Q Consensus 842 ----------~~g~~~~Fd~~a~G~v~---------------------gEG~~~vvLk~l~~A~~dgd~i~a-vI~g~a~ 889 (1152)
....-.|++.-.|-|-+ ++|+++.+|-+..--.+.|-.-.| .|.|.-+
T Consensus 173 hfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em 252 (408)
T KOG1406|consen 173 HFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEM 252 (408)
T ss_pred HHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHh
Confidence 11123345544454442 778888888877666666643333 3666555
Q ss_pred ecCCCCC----CC-CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh----------cccCC
Q psy616 890 NYDGKTN----GI-TAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVF----------KNKTY 954 (1152)
Q Consensus 890 ~~dG~~~----~~-~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f----------~~~~~ 954 (1152)
..|-.+. ++ -.-..+..+.+.++.+++.|++|.||+.||.|.+-.+ ++.|-.+||.-.= ++++.
T Consensus 253 ~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs~-nelityealglcpegqg~~~vdrgdnty 331 (408)
T KOG1406|consen 253 ATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSA-NELITYEALGLCPEGQGGEFVDRGDNTY 331 (408)
T ss_pred ccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccch-hhhhhHHHhcCCCCCCCceeeecCCCcc
Confidence 5554321 11 1111234567789999999999999999999999765 4445555554211 01111
Q ss_pred CCCc--eeeeccCCCCCccccchhhHHHHHHHHhhhc
Q psy616 955 NQKF--CAITSNKSNIGHTFAASGLVSLINLVQSIKY 989 (1152)
Q Consensus 955 ~~~~--~~igsvKsniGH~~~AaG~~~lik~~l~l~~ 989 (1152)
...+ -|-|..-|. ||+.+|.|+++......+|+.
T Consensus 332 ggkwvinpsgglisk-ghplgatglaqcaelcwqlrg 367 (408)
T KOG1406|consen 332 GGKWVINPSGGLISK-GHPLGATGLAQCAELCWQLRG 367 (408)
T ss_pred CceEEECCCCccccC-CCcCccchHHHHHHHHHHHhh
Confidence 1111 123555566 999999999999999999986
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.6e-08 Score=116.89 Aligned_cols=170 Identities=16% Similarity=0.155 Sum_probs=113.2
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC------CCcEEEEEecCCCHHHHHHHHHHH
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF------NNKAIYIQVDVSDKLKMISEINSI 307 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~------g~~v~~~~~Dvsd~~~v~~~~~~~ 307 (1152)
..++++|||||+|.||..+++.|+++|..++++. |+.......+.+... ...+.++.+|++|.+++.++++.
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~-r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~- 128 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAV-DTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG- 128 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh-
Confidence 4578999999999999999999999998554444 442221112233221 12578899999999998887753
Q ss_pred HhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcc-ccCC---
Q psy616 308 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA-ILGD--- 383 (1152)
Q Consensus 308 ~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~-~~g~--- 383 (1152)
+|.|||.|+... ....... ......+++.|+.++.+++.. ......||++||.++ .+|.
T Consensus 129 ------~d~V~hlA~~~~-~~~~~~~----~~~~~~~nv~gt~~llea~~~------~~~v~r~V~~SS~~~~vyg~~~~ 191 (367)
T PLN02686 129 ------CAGVFHTSAFVD-PAGLSGY----TKSMAELEAKASENVIEACVR------TESVRKCVFTSSLLACVWRQNYP 191 (367)
T ss_pred ------ccEEEecCeeec-ccccccc----cchhhhhhHHHHHHHHHHHHh------cCCccEEEEeccHHHhcccccCC
Confidence 688999998754 2211111 123456789999999998531 123567999999742 2221
Q ss_pred ---C----------------CChhhhHHHHHHHHHHHHHHh-cccccCCCceEEEEeCCcccCcc
Q psy616 384 ---F----------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNNSK 428 (1152)
Q Consensus 384 ---~----------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~~G 428 (1152)
+ ....|+.+|.+.+.+++.... .++ ++++|..+..-+.|
T Consensus 192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl------~~v~lRp~~vyGp~ 250 (367)
T PLN02686 192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGL------KLATICPALVTGPG 250 (367)
T ss_pred CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCc------eEEEEcCCceECCC
Confidence 0 124699999999999876544 333 77888776555444
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.6e-08 Score=115.73 Aligned_cols=239 Identities=15% Similarity=0.165 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaC 795 (1152)
...+.++++.+||+|||+++++++ ++++++...++. . ...+..+...+|++. |.+.|..+|
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~dID----~li~~s~~~~~~--------~-----p~~a~~v~~~LGl~~~~~~~dv~~aC 112 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPKDIG----AVYVGSESHPYA--------V-----KPTATIVAEAIGATPDLTAADLEFAC 112 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCcc--------c-----cchHHHHHHHcCCCCCceEEEHHHhH
Confidence 367899999999999999998887 677765443211 0 113567889999863 788899999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhc
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 875 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~ 875 (1152)
++++.||+.|...|++|.++.+||.+.+.... .++. . -=+..|+|++++||.+...
T Consensus 113 ~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~-------------~~~~------~--~~~~~GDGAaA~vl~~~~~--- 168 (345)
T TIGR00748 113 KAGTAGIQACMGLVASGMIKYGLAIGADTAQG-------------APGD------A--LEYTAGAGGAAYIIGEKNT--- 168 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc-------------CCCc------c--CcccCCCceEEEEEccCCc---
Confidence 99999999999999999999999999997420 1111 1 1145699999999985321
Q ss_pred CCCceEEEEEEEE-EecCCC----CCCCCCC------C-----HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCH
Q psy616 876 DGDPIHAIIRGSG-INYDGK----TNGITAP------N-----GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 939 (1152)
Q Consensus 876 dgd~i~avI~g~a-~~~dG~----~~~~~~P------~-----~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~ 939 (1152)
.+.+.+.. ...|+. ..+...| + ...-.++++++|+++|++++||+|+-.|-.+-.+
T Consensus 169 -----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~~--- 240 (345)
T TIGR00748 169 -----VAYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGKF--- 240 (345)
T ss_pred -----ceEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChHH---
Confidence 11222221 111110 0000001 0 1112267889999999999999999999554432
Q ss_pred HHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccc
Q psy616 940 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNK 1019 (1152)
Q Consensus 940 ~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~ 1019 (1152)
.+.+.+.++-... .+...-.=..+||+.+|+=...|...+ + .+. +
T Consensus 241 --~~~~~~~lgl~~e---k~~~~~~~~~~GNt~sAsipl~L~~~~---~--~~~-------~------------------ 285 (345)
T TIGR00748 241 --YLVAARMLGFPKE---QVKPGLLTPRIGNTYSGATPVGLSAVL---D--IAE-------P------------------ 285 (345)
T ss_pred --HHHHHHHcCCCHH---HeeccccccccCchhhhHHHHHHHHHH---H--hcC-------C------------------
Confidence 2234444442211 112111114789999998777665543 1 110 0
Q ss_pred cccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1020 KWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1020 ~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+ .+.++.+||.|-+-+.++++
T Consensus 286 ------G--d~vll~~~G~G~s~~~~~~~ 306 (345)
T TIGR00748 286 ------G--DRILAVSYGSGAGSDAFSIV 306 (345)
T ss_pred ------C--CEEEEEEecCCcceeEEEEE
Confidence 1 24678899999888888884
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1e-08 Score=111.21 Aligned_cols=145 Identities=21% Similarity=0.270 Sum_probs=110.6
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
++|||||.|=||..++..|++.|..++|+..-+....+.+..++ +.++..|+.|.+.+++++++. +||.|
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~~-----~idaV 71 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEEN-----KIDAV 71 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHhc-----CCCEE
Confidence 68999999999999999999999988888766544444333322 578999999998888888763 79999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC-----------
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS----------- 386 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~----------- 386 (1152)
||.||... -+. +.+.=.+.++.|+.|++.|.+++.. .....|| |||.++..|.+..
T Consensus 72 iHFAa~~~-VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am~~-------~gv~~~v-FSStAavYG~p~~~PI~E~~~~~p 138 (329)
T COG1087 72 VHFAASIS-VGE----SVQNPLKYYDNNVVGTLNLIEAMLQ-------TGVKKFI-FSSTAAVYGEPTTSPISETSPLAP 138 (329)
T ss_pred EECccccc-cch----hhhCHHHHHhhchHhHHHHHHHHHH-------hCCCEEE-EecchhhcCCCCCcccCCCCCCCC
Confidence 99999765 332 2233345788999999999999432 2344454 6888888887753
Q ss_pred -hhhhHHHHHHHHHHHHHHh
Q psy616 387 -CDYAMGNRFQTVYAKYLNN 405 (1152)
Q Consensus 387 -~~Yaaana~l~~la~~~~~ 405 (1152)
..|+.+|...+.+-+....
T Consensus 139 ~NPYG~sKlm~E~iL~d~~~ 158 (329)
T COG1087 139 INPYGRSKLMSEEILRDAAK 158 (329)
T ss_pred CCcchhHHHHHHHHHHHHHH
Confidence 4799999999988776654
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.6e-08 Score=115.94 Aligned_cols=164 Identities=16% Similarity=0.177 Sum_probs=110.6
Q ss_pred EEEEECCchhHHHHHHHHHHHcCC-cEEEEecCCcc--hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKL--NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~--~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++||||+|+||.+++++|+++|. ..|+++.|... ..+..+.+.. ..++.++.+|++|++++.++++.. ++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 74 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH-----QP 74 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence 379999999999999999999873 35666554321 1111222221 235778899999999998887653 58
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----------- 383 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~----------- 383 (1152)
|.|||+|+... . +.+.+.++..+++|+.|+.++.+++...+ ....+|++||....-+.
T Consensus 75 d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~i~~Ss~~v~g~~~~~~~~~e~~~ 143 (317)
T TIGR01181 75 DAVVHFAAESH-V----DRSISGPAAFIETNVVGTYTLLEAVRKYW------HEFRFHHISTDEVYGDLEKGDAFTETTP 143 (317)
T ss_pred CEEEEcccccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHhcC------CCceEEEeeccceeCCCCCCCCcCCCCC
Confidence 99999998754 1 22345567789999999999998864321 11258888885422111
Q ss_pred -CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCc
Q psy616 384 -FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPL 423 (1152)
Q Consensus 384 -~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~ 423 (1152)
.....|+.+|...+.+++....+. +.+++.+..+.
T Consensus 144 ~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~ 179 (317)
T TIGR01181 144 LAPSSPYSASKAASDHLVRAYHRTY-----GLPALITRCSN 179 (317)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHh-----CCCeEEEEecc
Confidence 123469999999999988754321 22556665543
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.9e-09 Score=115.56 Aligned_cols=165 Identities=20% Similarity=0.170 Sum_probs=114.6
Q ss_pred EEECCchhHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 240 LITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 240 LITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
|||||+|=||..+++.|.++|. ..|....+...... ...+...+ ...++.+|++|++++.++++ ..|+||
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~-~~~~~~~~-~~~~~~~Di~d~~~l~~a~~-------g~d~V~ 71 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF-LKDLQKSG-VKEYIQGDITDPESLEEALE-------GVDVVF 71 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc-chhhhccc-ceeEEEeccccHHHHHHHhc-------CCceEE
Confidence 6999999999999999999993 34444444432221 11222222 23389999999999988775 479999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC--------------
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------------- 384 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-------------- 384 (1152)
|+|.... ... ....+..+++|+.|+.++.+++. +.....||+.||++.+..+.
T Consensus 72 H~Aa~~~-~~~-----~~~~~~~~~vNV~GT~nvl~aa~-------~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~ 138 (280)
T PF01073_consen 72 HTAAPVP-PWG-----DYPPEEYYKVNVDGTRNVLEAAR-------KAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPY 138 (280)
T ss_pred EeCcccc-ccC-----cccHHHHHHHHHHHHHHHHHHHH-------HcCCCEEEEEcCcceeEeccCCCCcccCCcCCcc
Confidence 9998755 211 33456789999999999999964 33678899999998876511
Q ss_pred ---CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 385 ---GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 ---g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+.+|+.-+.++..........+....+++|.++..-+
T Consensus 139 ~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyG 183 (280)
T PF01073_consen 139 PSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYG 183 (280)
T ss_pred cccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeC
Confidence 234799999999988876554212223345777787655443
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.2e-08 Score=109.94 Aligned_cols=201 Identities=17% Similarity=0.113 Sum_probs=116.8
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCH-HHHHHHHHHHHhhc-CC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDK-LKMISEINSIINNI-GP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~-~~v~~~~~~~~~~~-G~ 313 (1152)
.+++|||||+|+||+.+++.|+++|.. |+++.|+... ..+.+. .+..+.++.+|++|. +++. + .+ ..
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~-V~~~~R~~~~--~~~~~~-~~~~~~~~~~Dl~d~~~~l~---~----~~~~~ 85 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFA-VKAGVRDVDK--AKTSLP-QDPSLQIVRADVTEGSDKLV---E----AIGDD 85 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCE-EEEEecCHHH--HHHhcc-cCCceEEEEeeCCCCHHHHH---H----HhhcC
Confidence 578999999999999999999999875 5555565321 111121 234688899999983 3322 2 22 26
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc---CCCCChhhh
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---GDFGSCDYA 390 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~---g~~g~~~Ya 390 (1152)
+|.|||++|......+. ..+.+|+.|+.++.+++. ......||++||+...- +.+....|.
T Consensus 86 ~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~-------~~~~~~iV~iSS~~v~g~~~~~~~~~~~~ 149 (251)
T PLN00141 86 SDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACR-------KAGVTRFILVSSILVNGAAMGQILNPAYI 149 (251)
T ss_pred CCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHH-------HcCCCEEEEEccccccCCCcccccCcchh
Confidence 99999999874311111 113577788888888853 23456899999986421 122234476
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+.|.+...+...+..+..-...+.+++.|..+...+..+. ....... ....-...+++++..+.+..++..+.
T Consensus 150 ~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~-~~~~~~~--~~~~~~~~i~~~dvA~~~~~~~~~~~ 222 (251)
T PLN00141 150 FLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPT-GNIVMEP--EDTLYEGSISRDQVAEVAVEALLCPE 222 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCC-ceEEECC--CCccccCcccHHHHHHHHHHHhcChh
Confidence 6665544332222111000012347788887755433221 1100000 00001135899999999999887654
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=4e-08 Score=114.47 Aligned_cols=212 Identities=17% Similarity=0.220 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaC 795 (1152)
-..++.+++.+||+|||+++++++ .+++++...++. . ...+.++...+|+++ |.+.+..+|
T Consensus 51 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~~~~--------~-----p~~a~~v~~~Lgl~~~~~~~dv~~~C 113 (347)
T PRK04262 51 TATIAVEAARNALKRAGIDPKEIG----AVYVGSESHPYA--------V-----KPTATIVAEALGATPDLTAADLEFAC 113 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCcc--------c-----ccHHHHHHHHcCCCCCceEEEHHHhH
Confidence 357889999999999999988876 566665433211 0 112457888999975 678899999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhc
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 875 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~ 875 (1152)
++++.||+.|...|++|.++.+||.+.+.... .++.. +. +..|+|++++||.+.+.
T Consensus 114 ~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~~~~~---~~-----~~~GDGA~A~ll~~~~~--- 169 (347)
T PRK04262 114 KAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------APGDA---LE-----YTAAAGGAAFIIGKEEV--- 169 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------CCCCC---CC-----CcCCCCcEEEEEecCcc---
Confidence 99999999999999999999999999886210 11111 10 23489999999985221
Q ss_pred CCCceEEEEEEEE-EecCCCC----CCCCCC----------C-HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCH
Q psy616 876 DGDPIHAIIRGSG-INYDGKT----NGITAP----------N-GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 939 (1152)
Q Consensus 876 dgd~i~avI~g~a-~~~dG~~----~~~~~P----------~-~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~ 939 (1152)
. +.|.++. ...|+.. .+...| . .....++++++|+++|++++||+|+-.|-.+..+-+.
T Consensus 170 -~----~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~ 244 (347)
T PRK04262 170 -I----AEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPLR 244 (347)
T ss_pred -c----ceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHHH
Confidence 1 2233321 1112110 000001 1 1344578899999999999999999999555544333
Q ss_pred HHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHH
Q psy616 940 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINL 983 (1152)
Q Consensus 940 ~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~ 983 (1152)
+.+.++-... + +..+-+=..+||+.+|+=...|-..
T Consensus 245 -----~~~~Lgl~~e--k-~~~~~~~~~~GNt~sAsi~~~L~~~ 280 (347)
T PRK04262 245 -----VAKMLGFTKE--Q-VKPGLLTPYIGNTYSGSALLGLAAV 280 (347)
T ss_pred -----HHHHcCCCHH--H-hhccchhhhhCChHHHHHHHHHHHH
Confidence 3333332111 1 2211122678999998866666443
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.8e-08 Score=116.12 Aligned_cols=155 Identities=16% Similarity=0.134 Sum_probs=109.6
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
+++||||+|.||..+++.|+++|. .|+++.|++... ..+. ...+.++.+|++|.+++.++++ .+|.|
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~v 68 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGE-EVRVLVRPTSDR---RNLE--GLDVEIVEGDLRDPASLRKAVA-------GCRAL 68 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCC-EEEEEEecCccc---cccc--cCCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence 689999999999999999999987 555556654221 1122 2247789999999988877664 47999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-C-----------
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-G----------- 385 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-g----------- 385 (1152)
||+|+... . ..+++...+++|+.|+.++.+++.. ...+.||++||.+.+.... +
T Consensus 69 i~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~-------~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~ 134 (328)
T TIGR03466 69 FHVAADYR-L------WAPDPEEMYAANVEGTRNLLRAALE-------AGVERVVYTSSVATLGVRGDGTPADETTPSSL 134 (328)
T ss_pred EEeceecc-c------CCCCHHHHHHHHHHHHHHHHHHHHH-------hCCCeEEEEechhhcCcCCCCCCcCccCCCCc
Confidence 99997543 1 1123566788999999999998542 2356799999976543211 1
Q ss_pred ---ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 386 ---SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 386 ---~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
...|+.+|.+.+.+.+..... .+.+++.+..+..
T Consensus 135 ~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilR~~~~ 171 (328)
T TIGR03466 135 DDMIGHYKRSKFLAEQAALEMAAE-----KGLPVVIVNPSTP 171 (328)
T ss_pred ccccChHHHHHHHHHHHHHHHHHh-----cCCCEEEEeCCcc
Confidence 347999999999998876543 1236677766544
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.3e-08 Score=108.80 Aligned_cols=175 Identities=18% Similarity=0.231 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccccccchh
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 797 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCsS 797 (1152)
...|+.+++.+||++||+++++++ .+++|... + ..+.++.++..+|+ |.+-|.+||||
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID----~IIvGdl~--------~--------Q~~~As~vA~~LGI--P~fdV~~ACST 107 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVD----FFLAGDLL--------N--------QIITANFVARDLGI--PFLGLYGACST 107 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeCCC--------C--------cccHHHHHHHHhCC--CEEEEeccCHH
Confidence 357889999999999999998887 57776311 0 01246678888886 88999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCC
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 877 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dg 877 (1152)
++.||..|...|++|.+|.+||.+.+...+.+....+ .+.. |. .+...-...|.|+|++||.+.. +|
T Consensus 108 f~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqfr~----p~ey-g~----q~~~ta~~tgdGAGA~vl~~~~----~~ 174 (327)
T TIGR02845 108 SMETLALGAMLVDGGFADRVLAATSSHYATAERQFRY----PTEY-GV----QKPPTAQWTVTGAGAVLLASTG----GG 174 (327)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhccc----cccc-cc----CCCCeeeEEEcccEEEEEeecC----CC
Confidence 9999999999999999999999999986554432211 0011 11 1223446689999999998742 45
Q ss_pred CceEEEEEEEEEecCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 878 DPIHAIIRGSGINYDGKTNGITAPN------GISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 878 d~i~avI~g~a~~~dG~~~~~~~P~------~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
-+|-.+=-|--+- .|++.|+ .++-...|.+=+++-|.+|+|-|.|-+-.-
T Consensus 175 ~~i~~~t~gkv~d-----~g~~d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i~tgdl 230 (327)
T TIGR02845 175 PRITSATIGKVVD-----YGITDPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDL 230 (327)
T ss_pred CceEEEEEEEEEe-----cCCCCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEecch
Confidence 5554433333222 2333443 345578899999999999999999987433
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.1e-08 Score=113.72 Aligned_cols=168 Identities=21% Similarity=0.196 Sum_probs=112.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh-----CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-----FNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~-----~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
+.+.+|||||+|=||..++++|.++|..++++..+..........+.. ...++.++.+|+.|.+++..+++
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---- 89 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---- 89 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh----
Confidence 357899999999999999999999987555554433222221222211 11357889999999888776664
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-C----
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F---- 384 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-~---- 384 (1152)
.+|.|||+|+... . .... ++-...+++|+.|+.+|.+++. ......||++||...+ |. .
T Consensus 90 ---~~d~ViHlAa~~~-~-~~~~---~~~~~~~~~Nv~gt~nll~~~~-------~~~~~~~v~~SS~~vy-g~~~~~~~ 153 (348)
T PRK15181 90 ---NVDYVLHQAALGS-V-PRSL---KDPIATNSANIDGFLNMLTAAR-------DAHVSSFTYAASSSTY-GDHPDLPK 153 (348)
T ss_pred ---CCCEEEECccccC-c-hhhh---hCHHHHHHHHHHHHHHHHHHHH-------HcCCCeEEEeechHhh-CCCCCCCC
Confidence 3799999998644 1 1112 2234568899999999999853 2245679999986432 31 1
Q ss_pred -------CChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcccCcc
Q psy616 385 -------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNSK 428 (1152)
Q Consensus 385 -------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~G 428 (1152)
....|+.+|...+.+++..... ++ +++.+..+.+-+.+
T Consensus 154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~------~~~~lR~~~vyGp~ 199 (348)
T PRK15181 154 IEERIGRPLSPYAVTKYVNELYADVFARSYEF------NAIGLRYFNVFGRR 199 (348)
T ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHhCC------CEEEEEecceeCcC
Confidence 1247999999999988765433 33 77777776665433
|
|
| >PRK00982 acpP acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=4e-09 Score=94.72 Aligned_cols=72 Identities=21% Similarity=0.288 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.+.+++.++++++++++.|+.+.+| .++|+|||+.+++...++++||++++...+++++||.+|++||.++
T Consensus 4 i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlglDSl~~~~li~~le~~f~i~i~~~~~~~~~ti~~l~~~l~~~ 76 (78)
T PRK00982 4 IFEKVKKIIVEQLGVDEEEVTPEASFVDDLGADSLDTVELVMALEEEFGIEIPDEDAEKIKTVGDAVDYIEKH 76 (78)
T ss_pred HHHHHHHHHHHHHCCCHHHCCCCcchHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCcHHHHHHHHHHh
Confidence 56789999999999999999999999 8999999999999999999999999999999999999999999764
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=98.85 E-value=1e-07 Score=110.09 Aligned_cols=241 Identities=20% Similarity=0.209 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
.-+..+++.+||+++|+++++++ -+++++...++. . ...+.+|...+|++. +++.|..+|++
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~~Id----~li~~t~~~d~~--------~-----p~~a~~v~~~Lg~~~~~~~di~~~C~g 115 (326)
T PRK05963 53 SDLAASAGDMALSDAGIERSDIA----LTLLATSTPDHL--------L-----PPSAPLLAHRLGLQNSGAIDLAGACAG 115 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC--------C-----CcHHHHHHHHhCCCCCceeeccchhhH
Confidence 57889999999999999888876 566665543321 1 124568999999954 78889999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCC
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 877 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dg 877 (1152)
++.||+.|...|++|. +.|||.+++.. + ..+.++ ....+++.|+|++++||.+.++. +
T Consensus 116 ~~~aL~~A~~~l~~~~-~~aLVv~~d~~-s----------~~~~~~-------~~~~~~lfGDgA~A~ll~~~~~~---~ 173 (326)
T PRK05963 116 FLYALVLADGFVRAQG-KPVLVVAANIL-S----------RRINMA-------ERASAVLFADAAGAVVLAPSAKA---N 173 (326)
T ss_pred HHHHHHHHHHHHHcCC-CeEEEEEechh-h----------ccCCcc-------ccCceEEEeecceEEEEEecCCC---C
Confidence 9999999999999985 88888888762 1 112221 22357889999999999864421 1
Q ss_pred CceEEEEEEEEEecCCC------------CC-----------CCCCCC--------HHHHHHHHHHHHHHcCCCCCCccE
Q psy616 878 DPIHAIIRGSGINYDGK------------TN-----------GITAPN--------GISQTELIKSVYKKSNLNPEDINY 926 (1152)
Q Consensus 878 d~i~avI~g~a~~~dG~------------~~-----------~~~~P~--------~~~q~~~i~~al~~Agi~p~dI~y 926 (1152)
..+.. .....+|. .. .+...+ .....++++++|+++|++++||+|
T Consensus 174 ~~~l~----~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~ 249 (326)
T PRK05963 174 SGVLG----SQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTPQDIDR 249 (326)
T ss_pred CceEE----EEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 12221 11111111 00 000001 112346788999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccc
Q psy616 927 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII 1006 (1152)
Q Consensus 927 ve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~ 1006 (1152)
+-.|-.+.. =.+.+.+.++-... + + +. .=..+||+.+|+=...|-. .++.+.+-
T Consensus 250 ~~~h~~~~~-----~~~~~~~~l~l~~~--k-~-~~-~l~~~Gn~~sas~~~~L~~---~~~~~~~~------------- 303 (326)
T PRK05963 250 FFPHQANAR-----IVDKVCETIGIPRA--K-A-AS-TLETYGNSSAATIPLSLSL---ANLEQPLR------------- 303 (326)
T ss_pred EEeCCCCHH-----HHHHHHHHcCCCHH--H-h-hh-hHHhhCcHHHHHHHHHHHH---HHHhCCCC-------------
Confidence 999966533 23334444432211 1 1 11 2257799866654443321 12222110
Q ss_pred cCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1007 LKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1007 ~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+-.+.++-+||.|-+-..++|+
T Consensus 304 --------------------~Gd~vll~~~G~G~~~~~~ll~ 325 (326)
T PRK05963 304 --------------------EGERLLFAAAGAGMTGGAVVMR 325 (326)
T ss_pred --------------------CCCEEEEEEEehhhhheeeEEe
Confidence 1134578889998888888775
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.9e-08 Score=113.49 Aligned_cols=164 Identities=15% Similarity=0.195 Sum_probs=109.6
Q ss_pred EEEEECCchhHHHHHHHHHHHcCC-cEEEEecCCcchHH----HHHHHHhCC--------CcEEEEEecCCCHHH-H-HH
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSI----IYKKLKKFN--------NKAIYIQVDVSDKLK-M-IS 302 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~~~~----~~~~l~~~g--------~~v~~~~~Dvsd~~~-v-~~ 302 (1152)
+++||||+|+||..+++.|+++|. .+|+++.|+...+. +.+.++..+ .++.++.+|++++.- + ..
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 479999999999999999999984 36666677654332 222222211 468899999986520 0 01
Q ss_pred HHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC
Q psy616 303 EINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 382 (1152)
Q Consensus 303 ~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g 382 (1152)
....+ ...+|.|||||+... .. ..+...+++|+.|+.++.+++.. .....||++||++....
T Consensus 81 ~~~~~---~~~~d~vih~a~~~~-~~-------~~~~~~~~~nv~g~~~ll~~a~~-------~~~~~~v~iSS~~v~~~ 142 (367)
T TIGR01746 81 EWERL---AENVDTIVHNGALVN-WV-------YPYSELRAANVLGTREVLRLAAS-------GRAKPLHYVSTISVLAA 142 (367)
T ss_pred HHHHH---HhhCCEEEeCCcEec-cC-------CcHHHHhhhhhHHHHHHHHHHhh-------CCCceEEEEccccccCC
Confidence 11222 236999999999754 21 12456778999999999988532 23445999999876533
Q ss_pred CC----------------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 383 DF----------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 383 ~~----------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
.. ....|+.+|...+.+.+.....++ +++.+..+...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~------~~~i~Rpg~v~ 195 (367)
T TIGR01746 143 IDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGL------PVTIVRPGRIL 195 (367)
T ss_pred cCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCC------CEEEECCCcee
Confidence 11 124699999999999887665554 67777766554
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.1e-07 Score=104.02 Aligned_cols=162 Identities=23% Similarity=0.288 Sum_probs=118.5
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
+|||||+|=||.++++.|.++|..++.+..++.......... ++.++.+|+.|.+.++++++.. .+|.||
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi 70 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI 70 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence 689999999999999999999987665555544332222211 6899999999999999999876 799999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------------CC
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------GS 386 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------------g~ 386 (1152)
|+|+... ...+.+.....+..|+.++.++.+++... +...||++||. +..+.. ..
T Consensus 71 ~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-------~~~~~i~~sS~-~~y~~~~~~~~~e~~~~~~~ 137 (236)
T PF01370_consen 71 HLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAREA-------GVKRFIFLSSA-SVYGDPDGEPIDEDSPINPL 137 (236)
T ss_dssp EEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHH-------TTSEEEEEEEG-GGGTSSSSSSBETTSGCCHS
T ss_pred Eeecccc-----ccccccccccccccccccccccccccccc-------ccccccccccc-cccccccccccccccccccc
Confidence 9998742 11122456778889999999999986532 33679999994 444433 23
Q ss_pred hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcc
Q psy616 387 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSK 428 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~G 428 (1152)
..|+.+|...+.+.+...+.. +.+++.+..+.+-+.+
T Consensus 138 ~~Y~~~K~~~e~~~~~~~~~~-----~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 138 SPYGASKRAAEELLRDYAKKY-----GLRVTILRPPNVYGPG 174 (236)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-----TSEEEEEEESEEESTT
T ss_pred ccccccccccccccccccccc-----cccccccccccccccc
Confidence 569999999999888766541 3378888877665544
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.6e-08 Score=114.31 Aligned_cols=159 Identities=14% Similarity=0.016 Sum_probs=105.7
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch-H--HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-S--IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~-~--~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
..+.+++||||+|.||..+++.|+++|.. |+++.|+... . ....++......+.++.+|++|.+++.++++...
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~-- 134 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYN-VVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG-- 134 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC--
Confidence 35678999999999999999999999875 4555555321 1 1112222223457889999999999998887531
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
+++|.||||+|... .. . . ..+++++.++.++.+++. ......||++||..... ....|.
T Consensus 135 -~~~D~Vi~~aa~~~-~~-~----~----~~~~vn~~~~~~ll~aa~-------~~gv~r~V~iSS~~v~~---p~~~~~ 193 (390)
T PLN02657 135 -DPVDVVVSCLASRT-GG-V----K----DSWKIDYQATKNSLDAGR-------EVGAKHFVLLSAICVQK---PLLEFQ 193 (390)
T ss_pred -CCCcEEEECCccCC-CC-C----c----cchhhHHHHHHHHHHHHH-------HcCCCEEEEEeeccccC---cchHHH
Confidence 27999999998532 11 1 1 224567788888888743 22456799999986432 245688
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCc
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPL 423 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~ 423 (1152)
.+|..++...+. ... +.+++.|..+.
T Consensus 194 ~sK~~~E~~l~~-~~~------gl~~tIlRp~~ 219 (390)
T PLN02657 194 RAKLKFEAELQA-LDS------DFTYSIVRPTA 219 (390)
T ss_pred HHHHHHHHHHHh-ccC------CCCEEEEccHH
Confidence 888887766543 122 33666666543
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=98.77 E-value=8.2e-08 Score=110.07 Aligned_cols=139 Identities=15% Similarity=0.160 Sum_probs=98.3
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
+|||||+|.||..+++.|.++|...|++++|...... +...+. ..+..|+++.+.++.+.+. .++.+|.||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~----~~~~~~--~~~~~d~~~~~~~~~~~~~---~~~~~D~vv 71 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK----FLNLAD--LVIADYIDKEDFLDRLEKG---AFGKIEAIF 71 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh----hhhhhh--eeeeccCcchhHHHHHHhh---ccCCCCEEE
Confidence 5899999999999999999999756666666543221 111111 3467888887776655543 356899999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC------------CCC
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------------FGS 386 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~------------~g~ 386 (1152)
|+|+... . +.++....+++|+.|+.++.+++.. ... .||++||.. .+|. ...
T Consensus 72 h~A~~~~-~------~~~~~~~~~~~n~~~~~~ll~~~~~-------~~~-~~v~~SS~~-vy~~~~~~~~e~~~~~~p~ 135 (314)
T TIGR02197 72 HQGACSD-T------TETDGEYMMENNYQYSKRLLDWCAE-------KGI-PFIYASSAA-TYGDGEAGFREGRELERPL 135 (314)
T ss_pred ECccccC-c------cccchHHHHHHHHHHHHHHHHHHHH-------hCC-cEEEEccHH-hcCCCCCCcccccCcCCCC
Confidence 9998643 2 1234567889999999999998642 122 588899864 3331 135
Q ss_pred hhhhHHHHHHHHHHHH
Q psy616 387 CDYAMGNRFQTVYAKY 402 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~ 402 (1152)
..|+.+|...+.+++.
T Consensus 136 ~~Y~~sK~~~e~~~~~ 151 (314)
T TIGR02197 136 NVYGYSKFLFDQYVRR 151 (314)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 6799999999999875
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.5e-07 Score=111.55 Aligned_cols=161 Identities=12% Similarity=0.146 Sum_probs=105.9
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC-----CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-----NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~-----g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++|||||+|-||..+++.|+++|...|+.+.|+... ...+... ..++.++.+|++|.+.+.++++
T Consensus 15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~---~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------ 85 (386)
T PLN02427 15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDK---IKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------ 85 (386)
T ss_pred cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchh---hhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence 5799999999999999999999854456655655321 1122211 2358899999999988877664
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 384 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------- 384 (1152)
.+|.|||+|+... ..... ... ...+..|+.|+.++.+++.. .. ..||++||.. .+|..
T Consensus 86 -~~d~ViHlAa~~~-~~~~~-~~~---~~~~~~n~~gt~~ll~aa~~-------~~-~r~v~~SS~~-vYg~~~~~~~~e 150 (386)
T PLN02427 86 -MADLTINLAAICT-PADYN-TRP---LDTIYSNFIDALPVVKYCSE-------NN-KRLIHFSTCE-VYGKTIGSFLPK 150 (386)
T ss_pred -cCCEEEEcccccC-hhhhh-hCh---HHHHHHHHHHHHHHHHHHHh-------cC-CEEEEEeeee-eeCCCcCCCCCc
Confidence 2699999998754 21111 122 23355799999999888531 12 4699999964 33321
Q ss_pred ---------------------------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 385 ---------------------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 ---------------------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+.+|...+.++....+. .+.+++.+..+..-+
T Consensus 151 ~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~g~~~~ilR~~~vyG 214 (386)
T PLN02427 151 DHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIG 214 (386)
T ss_pred ccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh-----cCCceEEecccceeC
Confidence 0135999999999888765432 123666666654443
|
|
| >KOG1390|consensus | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.8e-08 Score=107.02 Aligned_cols=236 Identities=22% Similarity=0.258 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHH--cCCCCCcccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYF--MDLKGPVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~--~~l~GPs~tvdtaC 795 (1152)
-+.|.-.+...|||.+++++++.. -||+|.--....-+ ..+-..+-- +...=|+.||+--|
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~----eVi~GnVl~AnlGQ-------------apaRQaalgAGlp~sv~~tTvNkvC 92 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVA----EVIFGNVLSANLGQ-------------APARQAALGAGLPYSVPATTVNKVC 92 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhh----hhhhccccccccCc-------------chHHHHHhhcCCCcceeeEeehhhh
Confidence 345666788999999999887655 36666422111000 111122222 22355999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCC----------CCCC---------------------
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGML----------SPDG--------------------- 844 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~l----------s~~g--------------------- 844 (1152)
+|++.|+.+|.|+|+.|..|++++||.+.+..-- |+...+.+.- ..||
T Consensus 93 aSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP-~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE~~a~~~ 171 (396)
T KOG1390|consen 93 ASGMKAVILAAQSIQTGHADIVVAGGMESMSNVP-YLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAENTAKKY 171 (396)
T ss_pred hhhHHHHHHHHHHHhcCCccEEEecccchhccCc-chhhhccCcCcCCeeeeechhhcchHHHhccCCcchhHhhhHHHh
Confidence 9999999999999999999999999998754322 2222222110 0111
Q ss_pred -------------------------------------------------------------Ccc-cCCCCCCCcc-----
Q psy616 845 -------------------------------------------------------------KCY-VFDERANGLV----- 857 (1152)
Q Consensus 845 -------------------------------------------------------------~~~-~Fd~~a~G~v----- 857 (1152)
.-| .|- ..+|++
T Consensus 172 ~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~vF~-~~ggTVTaaNA 250 (396)
T KOG1390|consen 172 QITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPVFK-EDGGTVTAANA 250 (396)
T ss_pred CCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccceee-cCCCeeccccc
Confidence 011 111 112222
Q ss_pred --cccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy616 858 --PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTK 935 (1152)
Q Consensus 858 --~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~ 935 (1152)
+-+|+++++|.+.+.+.+.|-+++|.|.|++-..---..--++| .-++.++|++||+..+||+|+|..-
T Consensus 251 S~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP-----~laipk~lk~aG~~~sdVd~~EiNE---- 321 (396)
T KOG1390|consen 251 STLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAP-----ALAIPKALKKAGLEQSDVDYWEINE---- 321 (396)
T ss_pred cccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccch-----HHHHHHHHHHcCcchhhhhHHhhhh----
Confidence 46899999999999999999999999999873311111111334 5679999999999999999999752
Q ss_pred CCCHHHHH--HHHHHhcccCCCCCceee--eccCCCCCccccchhhHHHHHHHHhhhc
Q psy616 936 LGDPVEIN--ALHDVFKNKTYNQKFCAI--TSNKSNIGHTFAASGLVSLINLVQSIKY 989 (1152)
Q Consensus 936 ~gD~~E~~--al~~~f~~~~~~~~~~~i--gsvKsniGH~~~AaG~~~lik~~l~l~~ 989 (1152)
..-.- |..+.++-...+ +-+ |+| -|||+.++||.-=++-.+..|+.
T Consensus 322 ---AFs~v~lA~iK~LgldP~k---VNv~GGAV--alGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 322 ---AFSVVVLANIKKLGLDPSK---VNVHGGAV--ALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred ---hhhHHHHHHHHHhCCCHhh---ccCCCcee--ecCCCcCCcchhHHHHHHHHHHh
Confidence 11112 222223221111 111 222 37999999998777777777765
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.4e-07 Score=105.07 Aligned_cols=231 Identities=15% Similarity=0.146 Sum_probs=142.4
Q ss_pred hhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccc
Q psy616 712 AERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVM 789 (1152)
Q Consensus 712 a~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~ 789 (1152)
+....--..+..+++.+||+++|+++++++ .++++++.+ +. ....+.+|...+|++. +++
T Consensus 79 ~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id----~li~~s~~~-~~-------------~P~~a~~i~~~lgl~~~~~~~ 140 (361)
T cd00831 79 DIALEEARELAEEAARGALDEAGLRPSDID----HLVVNTSTG-NP-------------TPSLDAMLINRLGLRPDVKRY 140 (361)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEECCCC-CC-------------CCCHHHHHHHHhCCCcccchh
Confidence 334444567889999999999999887775 555555432 11 1235668999999974 677
Q ss_pred ccc-ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEc
Q psy616 790 AIN-TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLK 868 (1152)
Q Consensus 790 tvd-taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk 868 (1152)
-|. .+|++++.||+.|...|++|..+.|||.+++.... . +.++. ..+.--..+..|+|++++||.
T Consensus 141 dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~-~----------~~~~d---~~~~~~~~~lfGDgaaA~ll~ 206 (361)
T cd00831 141 NLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSL-W----------YRGPD---HRSMLVGNALFGDGAAAVLLS 206 (361)
T ss_pred ccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccc-e----------eCCCC---cHHHhhhhhhccCCceEEEEE
Confidence 887 89999999999999999999999999999987322 0 11111 000001357789999999999
Q ss_pred ccchhhcCCCceEEEEEEEEE--------------ecCCCCCCCC--CCC--HHHHHHHHHHHHHHc--CCCCCCccEEE
Q psy616 869 RLSRALSDGDPIHAIIRGSGI--------------NYDGKTNGIT--APN--GISQTELIKSVYKKS--NLNPEDINYII 928 (1152)
Q Consensus 869 ~l~~A~~dgd~i~avI~g~a~--------------~~dG~~~~~~--~P~--~~~q~~~i~~al~~A--gi~p~dI~yve 928 (1152)
+.++...-... ...+.++.. ...+....+. .|+ .....++++++|+++ |++++||+|+-
T Consensus 207 ~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~ 285 (361)
T cd00831 207 NDPRDRRRERP-LFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWC 285 (361)
T ss_pred cCCCccccccc-ceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCccccceEEE
Confidence 75543100011 111222111 0111000000 011 124456789999999 99999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhcccCCCCCceee-eccCCCCCccccchhhHHHHHH
Q psy616 929 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINL 983 (1152)
Q Consensus 929 ~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~i-gsvKsniGH~~~AaG~~~lik~ 983 (1152)
.|-.+-+.- +++.+.++-...+ +.. -.+=..+||+.+|+=...|-..
T Consensus 286 ~H~~~~~i~-----~~v~~~lgl~~~~---~~~s~~~l~~~GN~~sasi~~~L~~~ 333 (361)
T cd00831 286 VHPGGRAVL-----DAVEKALGLSPED---LEASRMVLRRYGNMSSSSVLYVLAYM 333 (361)
T ss_pred ECCCChHHH-----HHHHHHcCCCHHH---HHHHHHHHHHhCCchhccHHHHHHHH
Confidence 997665433 3455555432111 110 0122467999988866655543
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-07 Score=108.21 Aligned_cols=155 Identities=16% Similarity=0.204 Sum_probs=102.3
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh--hcCCeeE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN--NIGPIDG 316 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~--~~G~idg 316 (1152)
+|||||+|-||..+++.|+++|..+++++.+....... . ....+|++|..+...+++.+.+ .++.+|.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~ 71 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V---------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEA 71 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H---------hhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence 79999999999999999999997666665554322111 0 1234677776666666665542 3568999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------ 384 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------------ 384 (1152)
|||+||... .. ..+. ...++.|+.++.+|.+++.. ... .||++||.+.+ |..
T Consensus 72 Vih~A~~~~-~~---~~~~---~~~~~~n~~~t~~ll~~~~~-------~~~-~~i~~SS~~vy-g~~~~~~~~E~~~~~ 135 (308)
T PRK11150 72 IFHEGACSS-TT---EWDG---KYMMDNNYQYSKELLHYCLE-------REI-PFLYASSAATY-GGRTDDFIEEREYEK 135 (308)
T ss_pred EEECceecC-Cc---CCCh---HHHHHHHHHHHHHHHHHHHH-------cCC-cEEEEcchHHh-CcCCCCCCccCCCCC
Confidence 999998644 22 2222 34689999999999998642 123 38888887532 321
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
....|+.+|.+.+.+++...... +.+++.+..+..
T Consensus 136 p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~lR~~~v 170 (308)
T PRK11150 136 PLNVYGYSKFLFDEYVRQILPEA-----NSQICGFRYFNV 170 (308)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeeeee
Confidence 12579999999888877654321 225666655433
|
|
| >CHL00124 acpP acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.2e-08 Score=90.78 Aligned_cols=76 Identities=20% Similarity=0.294 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCccc-cCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLAD-YGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~e-lGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
+.+.+.+++.+++.++++++.|.++.+|.+ ||+|||..++|...|+++||++++...+++.+|+.++++||.++..
T Consensus 4 ~~i~~~l~~ii~~~~~~~~~~i~~d~~l~~dlg~DSl~~~eli~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~ 80 (82)
T CHL00124 4 NDIFEKVQSIVAEQLGIEKSEVTLDANFTRDLGADSLDVVELVMAIEEKFDIEIPDEDAEKISTLQEAVDFISQKIN 80 (82)
T ss_pred HHHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCccCHHHHHHcCCHHHHHHHHHHHhc
Confidence 446778999999999999999999999987 9999999999999999999999999999999999999999987643
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.5e-07 Score=107.97 Aligned_cols=229 Identities=13% Similarity=0.130 Sum_probs=136.2
Q ss_pred CCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC
Q psy616 706 EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK 785 (1152)
Q Consensus 706 ~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~ 785 (1152)
.+..+.....+.-.-+..+++.+||+++|+++++++ -|+++++.+.+ .+ ..+.++...||++
T Consensus 96 ~~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~---------~P-----~~a~~v~~~LGl~ 157 (399)
T PLN03171 96 SLDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTNSGAH---------IP-----GVDFRLVPLLGLR 157 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCC---------CC-----chHHHHHHHhCCC
Confidence 344455555566778899999999999999988876 56666655421 11 2356788888997
Q ss_pred CC---cccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCccccccc
Q psy616 786 GP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 862 (1152)
Q Consensus 786 GP---s~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~ 862 (1152)
.- .+-+..+|++.+.||+.|...|++|....+||.+++.... .+.+..+. .++..-.+..+|+|+
T Consensus 158 ~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~-----------~~~~~d~~-~~~~~v~~~LFGDGA 225 (399)
T PLN03171 158 PSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLL-----------LFNGPDEG-CFQTLLNQGLFGDGA 225 (399)
T ss_pred cccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEecccc-----------ccCCCCcc-cHHhhhccccccCcc
Confidence 53 3456679999999999999999999999999999997311 01111110 112222367899999
Q ss_pred EEEEEcccchhhcCCCceEEEEEEEEEecCCC--------------CCCCCCCCH-HHHHHHHHHHHHH---------cC
Q psy616 863 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGK--------------TNGITAPNG-ISQTELIKSVYKK---------SN 918 (1152)
Q Consensus 863 ~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~--------------~~~~~~P~~-~~q~~~i~~al~~---------Ag 918 (1152)
+++||.+.+...+. .++ .|.......++. ...+...+. ....+.+++++++ +|
T Consensus 226 aA~vl~~~~~~~~~--~~~-~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g 302 (399)
T PLN03171 226 AAVIVGADADAAER--PLF-EIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGG 302 (399)
T ss_pred EEEEEecCCCCCCC--Cce-EEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccC
Confidence 99999875432111 222 222221111111 111111222 3344445666654 68
Q ss_pred CCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchh
Q psy616 919 LNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASG 976 (1152)
Q Consensus 919 i~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG 976 (1152)
++++||+++ .|=-+- .=++++.+.++-...+ +... .+=...|++-+|+=
T Consensus 303 ~~~~di~~~-~Hq~~~-----~il~~v~~~Lgl~~ek---~~~s~~~l~~yGNtssaSi 352 (399)
T PLN03171 303 AEWNDLFWA-VHPGSS-----AILDQVDAALGLEPEK---LAASRRVLSDYGNMFGATV 352 (399)
T ss_pred CCcccceEE-EcCCcH-----HHHHHHHHHcCCCHHH---hHHHHHHHHHhCcchhhhH
Confidence 899999998 684443 3444555555432211 1110 11235688777653
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.1e-08 Score=115.44 Aligned_cols=245 Identities=20% Similarity=0.238 Sum_probs=138.4
Q ss_pred HHHHHHHHhcCCC--CCCCCCCc-eEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--CcccccccchhH
Q psy616 724 QESWLALEDAGYG--PNQIANQK-IGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACSSS 798 (1152)
Q Consensus 724 ~~a~~AledAG~~--~~~l~~~~-~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCsSs 798 (1152)
+....++.|+++. +++++... -.+++|+.... +.....++..++...|+.+ |.++|+.+|+|+
T Consensus 28 e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~------------g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c~SG 95 (392)
T COG0183 28 EALGAALIDAGLERAPADVDAADVDDVILGCVLQA------------GEQGQNIARQAALAAGLPGSVPAVTVNRACASG 95 (392)
T ss_pred HHHHHHHHHHHhhhccccCCHHHhhhheecccccc------------ccccccHHHHHHHHcCCCCCCCceEEeccchhH
Confidence 4446677777763 23455432 25666643321 1112345667888899987 999999999999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEeccccCcCHHH----HHH--------HH---------------------hcCCCC----
Q psy616 799 LVATHIACQSLRQHECDTAISAGVNLMISPEA----YIA--------MT---------------------SAGMLS---- 841 (1152)
Q Consensus 799 l~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~----~~~--------~~---------------------~~g~ls---- 841 (1152)
+.|++.|+++|++|++|++|+||++.+..-.. ... +. +.| .+
T Consensus 96 ~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~~A~~~~~~yG-itre~~ 174 (392)
T COG0183 96 LAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYG-ISREDQ 174 (392)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchhHHHHHHHHHHHHhC-CCHHHH
Confidence 99999999999999999999999975433211 000 00 001 00
Q ss_pred --------------CC-CC----------cccCCCC----CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEe-c
Q psy616 842 --------------PD-GK----------CYVFDER----ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN-Y 891 (1152)
Q Consensus 842 --------------~~-g~----------~~~Fd~~----a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~-~ 891 (1152)
|. +. -++|+.+ .|-....||++.+++-..+.+ | .++.|.+.. +
T Consensus 175 d~~Av~sh~~A~~np~a~~~~eI~~~~v~~~~~~~dp~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagnas~i~ 247 (392)
T COG0183 175 DEVAVKSHKNAAANPKAGFFDEITPEDVLNSPVVADPLRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNASGIN 247 (392)
T ss_pred HHHHHHHHHHHHhhHhcCCCCceeeEEecCCceecCCcccCCCCCChhhhcCceeccccCC---c----eEEEecccccc
Confidence 00 00 0122211 121234677777776554432 1 455554421 2
Q ss_pred CCCCCCCCCCCHHH-----HHHHHHHHHHHcCCCCC--CccEEEecCCCCCCCCH-HHH---------HHHHHH-hcccC
Q psy616 892 DGKTNGITAPNGIS-----QTELIKSVYKKSNLNPE--DINYIITHGTGTKLGDP-VEI---------NALHDV-FKNKT 953 (1152)
Q Consensus 892 dG~~~~~~~P~~~~-----q~~~i~~al~~Agi~p~--dI~yve~hgtgT~~gD~-~E~---------~al~~~-f~~~~ 953 (1152)
||...-.+..-... -..+-.++|+.+|++|. ++++.|.|..-|..+-. +|- -++... .-...
T Consensus 248 dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~nEafa~~~~~~~~~~ 327 (392)
T COG0183 248 DGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKIL 327 (392)
T ss_pred cHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCchhhhcCceecChHHHHHHHhhHHhc
Confidence 33311011110011 12233466778888877 77777777766665443 331 111111 10111
Q ss_pred CCCCceeeeccCCCCCccccchhhHHHHHHHHhhhc
Q psy616 954 YNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 989 (1152)
Q Consensus 954 ~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~ 989 (1152)
...+..+-|..|+. ||+.+|+|+..+...+.+|+.
T Consensus 328 G~~~VN~~GGaiA~-GHPiGAtG~~~~~~l~~ql~~ 362 (392)
T COG0183 328 GDLPVNPSGGAIAL-GHPIGATGARILVELARQLRG 362 (392)
T ss_pred CCceeCCCcchhhc-CCCccchHHHHHHHHHHHHhh
Confidence 11222345888877 999999999999999999998
|
|
| >PRK05883 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.1e-08 Score=90.36 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
...+.+.+++++++.|++++++|.++.+| .+||+|||..+++...|+++||++++..++.+.+|+.+|++|+.++.
T Consensus 12 ~~~I~~~l~~iia~~l~v~~~~I~~d~~l~~dlg~DSL~~v~lv~~lE~~fgI~i~~ee~~~~~TV~dl~~~v~~~~ 88 (91)
T PRK05883 12 PSTVSATLLSILRDDLNVDLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEDLLSCDTVGDLEAAIAAKV 88 (91)
T ss_pred HHHHHHHHHHHHHHHhCCChhhCCCCCchhhccCCChHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHc
Confidence 45588899999999999999999999999 78999999999999999999999999999999999999999997754
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.1e-07 Score=102.07 Aligned_cols=153 Identities=18% Similarity=0.250 Sum_probs=112.2
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHH---HHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIY---KKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~---~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.+++|||||.|=||.+++.+|.++|..++++..-........ +.+...+..+.++..|+.|.+.++++++..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 468999999999999999999999998888754332222222 233333578999999999999998888765
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC--------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------- 384 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-------- 384 (1152)
.+|.|+|.|+... .+.-.+. -......|+.|+++|.+.+ ...+...+|+.|| ++..|.+
T Consensus 77 ~fd~V~Hfa~~~~-vgeS~~~----p~~Y~~nNi~gtlnlLe~~-------~~~~~~~~V~sss-atvYG~p~~ip~te~ 143 (343)
T KOG1371|consen 77 KFDAVMHFAALAA-VGESMEN----PLSYYHNNIAGTLNLLEVM-------KAHNVKALVFSSS-ATVYGLPTKVPITEE 143 (343)
T ss_pred CCceEEeehhhhc-cchhhhC----chhheehhhhhHHHHHHHH-------HHcCCceEEEecc-eeeecCcceeeccCc
Confidence 4999999998766 3332222 2667889999999999984 2334455665444 5555543
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhc
Q psy616 385 -----GSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 385 -----g~~~Yaaana~l~~la~~~~~~ 406 (1152)
....|+.+|.+++...+..+..
T Consensus 144 ~~t~~p~~pyg~tK~~iE~i~~d~~~~ 170 (343)
T KOG1371|consen 144 DPTDQPTNPYGKTKKAIEEIIHDYNKA 170 (343)
T ss_pred CCCCCCCCcchhhhHHHHHHHHhhhcc
Confidence 2356999999999999887654
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.3e-07 Score=99.87 Aligned_cols=175 Identities=19% Similarity=0.245 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccccccchhH
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSS 798 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCsSs 798 (1152)
..|+.+++.+||++||+++++++ .+|+|... + ..+.++.++..+++ |.+-|++||||+
T Consensus 57 seLa~eAa~~ALekAGI~~~DID----~lI~Gdll--------~--------Q~~sAs~vA~~LGI--Pa~dV~gACST~ 114 (337)
T PRK08304 57 RKMMEDAIQQALQKANLKKSDID----YLLAGDLL--------N--------QIISANFAARELGI--PFLGLYGACSTM 114 (337)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEECCC--------C--------CcchHHHHHHHhCC--cEEEEeccCHHH
Confidence 57889999999999999998887 67777321 0 01345667777775 999999999999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCCC
Q psy616 799 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGD 878 (1152)
Q Consensus 799 l~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd 878 (1152)
..||++|+..|++|.+|.+||.+.+...+.+..+-|- + .=|.-||.. -...+.|+|+++|.+. ..|-
T Consensus 115 ~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqfr~P----~-eyg~qrp~t----aqwtvtGAGA~i~~~~----~~~~ 181 (337)
T PRK08304 115 MESLALGSMLIDGGFADRVLAATSSHFATAERQFRFP----T-EYGGQRPPT----AQWTVTGAGAVLLSRE----GSGP 181 (337)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhccCc----h-hccccCCCc----ceEEeeccEEEEEecC----CCCc
Confidence 9999999999999999999999999765554322110 0 012223322 2345779999999753 2333
Q ss_pred ceEEEEEEEEEecCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy616 879 PIHAIIRGSGINYDGKTNGITAPN------GISQTELIKSVYKKSNLNPEDINYIITHGTG 933 (1152)
Q Consensus 879 ~i~avI~g~a~~~dG~~~~~~~P~------~~~q~~~i~~al~~Agi~p~dI~yve~hgtg 933 (1152)
+|-.+=-|--+- -|+..|+ .++-.+.|.+=+++.|.+|+|-|.|-+-.-|
T Consensus 182 ~i~~~t~Gkv~D-----~g~~d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg 237 (337)
T PRK08304 182 RITHATIGKVVD-----LGIKDPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLG 237 (337)
T ss_pred eEEEEeEEEEEe-----cCCCCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchH
Confidence 443322222221 2333443 3455788999999999999999999874433
|
|
| >PRK12449 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.6e-08 Score=87.26 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
+.+.+.+++.+++.++.++..|.++.+| .+||+||+..++|...|+++||++++..++++++|+.+|++||.+++
T Consensus 4 ~~i~~~l~~il~~~~~~~~~~i~~~~~l~~dlg~DSl~~~~li~~lE~~f~i~i~~~~~~~~~ti~~l~~~l~~~~ 79 (80)
T PRK12449 4 EEIFERLINLIQKQRSYLSLAITEQTHLKDDLAVDSIELVEFIINVEDEFHIAIPDEDVEDMVSMGDLLDYLVQRL 79 (80)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCcHHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHhc
Confidence 3467789999999999988899999999 69999999999999999999999999999999999999999997753
|
|
| >PRK05350 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=6.7e-08 Score=87.57 Aligned_cols=75 Identities=20% Similarity=0.278 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
+.+.+.+++.+++.+++++++|+++.+| .+||+|||..++|...|+++||++++...+.+.+|+.++++|+.+..
T Consensus 5 ~~i~~~v~~ii~~~~~~~~~~i~~d~~l~~dlg~DSld~veli~~lE~~fgI~i~~~~~~~~~Tv~dlv~~v~~~~ 80 (82)
T PRK05350 5 EEILERLRAILVELFEIDPEDITPEANLYEDLDLDSIDAVDLVVHLQKLTGKKIKPEEFKSVRTVQDVVDAVERLL 80 (82)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCCCccchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHhhcCcHHHHHHHHHHHh
Confidence 4567789999999999999999999996 99999999999999999999999999999999999999999998754
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.3e-07 Score=113.24 Aligned_cols=166 Identities=17% Similarity=0.202 Sum_probs=109.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHH--hCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLK--KFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~G-a~~vil~~R~~~~~~~~~~l~--~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||+|-||..+++.|.++| ..+|+.+.|....... ..+. ....++.++.+|++|.+.+..++..
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----- 78 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNL-KNLNPSKSSPNFKFVKGDIASADLVNYLLIT----- 78 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchh-hhhhhcccCCCeEEEECCCCChHHHHHHHhh-----
Confidence 46789999999999999999999985 2355555554221111 1111 1134688999999998877665432
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 384 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------- 384 (1152)
..+|.|||+|+... .. ...++-...+++|+.|+.+|.+++.. .+....||++||...+ |..
T Consensus 79 ~~~D~ViHlAa~~~-~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~------~~~vkr~I~~SS~~vy-g~~~~~~~~~ 146 (668)
T PLN02260 79 EGIDTIMHFAAQTH-VD----NSFGNSFEFTKNNIYGTHVLLEACKV------TGQIRRFIHVSTDEVY-GETDEDADVG 146 (668)
T ss_pred cCCCEEEECCCccC-ch----hhhhCHHHHHHHHHHHHHHHHHHHHh------cCCCcEEEEEcchHHh-CCCccccccC
Confidence 36999999998754 11 11122245678999999999988532 1235679999996432 211
Q ss_pred --------CChhhhHHHHHHHHHHHHHHh-cccccCCCceEEEEeCCcc
Q psy616 385 --------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 --------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w 424 (1152)
....|+.+|...+.+.+.... .++ +++.+..+..
T Consensus 147 ~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l------~~vilR~~~V 189 (668)
T PLN02260 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL------PVITTRGNNV 189 (668)
T ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCC------CEEEECcccc
Confidence 134699999999998876544 333 5666655433
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=9.9e-07 Score=103.72 Aligned_cols=276 Identities=15% Similarity=0.164 Sum_probs=164.2
Q ss_pred CCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC
Q psy616 706 EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK 785 (1152)
Q Consensus 706 ~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~ 785 (1152)
.+..+....+.-.-.|..+++.+||++||+++++++ -+++.++.+.. . ..++.++...||++
T Consensus 90 ~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId----~ii~~t~t~~~---------~-----P~~a~~l~~~LGl~ 151 (393)
T PLN03172 90 SLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSGVD---------M-----PGADYQLTKLLGLK 151 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCc---------C-----chHHHHHHHHhCCC
Confidence 556666666667778999999999999999887775 45555544311 1 13678899999998
Q ss_pred CC---cccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCccccccc
Q psy616 786 GP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 862 (1152)
Q Consensus 786 GP---s~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~ 862 (1152)
.- .+.+..+|++++.+|..|.+.+++|....+||.+++++.- . + ..++.+ ..+.--....+|+|+
T Consensus 152 ~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~--~---~-----~~~~d~--~~~~~v~~~LFGDGA 219 (393)
T PLN03172 152 PSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAV--T---F-----RGPSDT--HLDSLVGQALFGDGA 219 (393)
T ss_pred CCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhh--h---h-----cccccc--cHHhhhccchhcCce
Confidence 74 3456899999999999999999999999999999998331 0 0 111110 000011246689999
Q ss_pred EEEEEcccchhhcCCCceEEEEEEEE---EecCCCC------CCC----C--CCC--HHHHHHHHHHHHHHcCCCCCCcc
Q psy616 863 VAVVLKRLSRALSDGDPIHAIIRGSG---INYDGKT------NGI----T--APN--GISQTELIKSVYKKSNLNPEDIN 925 (1152)
Q Consensus 863 ~~vvLk~l~~A~~dgd~i~avI~g~a---~~~dG~~------~~~----~--~P~--~~~q~~~i~~al~~Agi~p~dI~ 925 (1152)
+++||.+.++.. .+..++.++.... ...+|.. .|+ . .|. .......+++.|++.|+++.||+
T Consensus 220 aAvVl~~~~~~~-~~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~ 298 (393)
T PLN03172 220 AAVIIGADPDTK-IERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSI 298 (393)
T ss_pred EEEEEecCCCCc-ccCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccccc
Confidence 999998643321 1123333332211 1222210 111 1 111 22345677888999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHHHHHHH-hhhcCCcCCCCCCCCCCc
Q psy616 926 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQ-SIKYKIIPASLHCEKENN 1003 (1152)
Q Consensus 926 yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~lik~~l-~l~~~~ipp~~~~~~~np 1003 (1152)
++-.|=-|-+ =++++.+.++-...+ +... .+=...|++-+|+=+.-|-+..- .++.+.+.
T Consensus 299 ~~~~Hqgg~~-----Il~~v~~~Lgl~~~~---~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~---------- 360 (393)
T PLN03172 299 FWIAHPGGPA-----ILDQVEIKLDLKEEK---LRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGS---------- 360 (393)
T ss_pred eEEecCCcHH-----HHHHHHHHcCCCHHH---HHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCC----------
Confidence 9999965544 344555555432211 1100 12234588776653333322110 01111110
Q ss_pred ccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1004 YIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1004 ~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
.......+...+||.|=+-..++|+..
T Consensus 361 --------------------~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 361 --------------------TGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred --------------------CCCCcceEEEEEeCCcceeeeeeeEec
Confidence 001113567889999888888888853
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.58 E-value=8.2e-07 Score=96.07 Aligned_cols=153 Identities=18% Similarity=0.176 Sum_probs=105.9
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcE-EEEecCC--cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTN-LILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~-vil~~R~--~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+.+|||||.|=||..+++++.++.... |+.+..- ....+.++.+.. ..+..++++||+|.+.+.+++.+- .
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~-----~ 74 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEY-----Q 74 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhc-----C
Confidence 368999999999999999999987643 5544332 111223333332 357899999999988888777653 7
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecC--CccccCC--------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSS--SSAILGD-------- 383 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS--~a~~~g~-------- 383 (1152)
+|.|+|.|.-..-|.. .+.=..-+++|+.|+++|.+++..+.. .=.|+.+|. +-|-++.
T Consensus 75 ~D~VvhfAAESHVDRS-----I~~P~~Fi~TNv~GT~~LLEaar~~~~------~frf~HISTDEVYG~l~~~~~~FtE~ 143 (340)
T COG1088 75 PDAVVHFAAESHVDRS-----IDGPAPFIQTNVVGTYTLLEAARKYWG------KFRFHHISTDEVYGDLGLDDDAFTET 143 (340)
T ss_pred CCeEEEechhcccccc-----ccChhhhhhcchHHHHHHHHHHHHhcc------cceEEEeccccccccccCCCCCcccC
Confidence 9999999976542333 333345688999999999999765421 113777765 2222221
Q ss_pred ---CCChhhhHHHHHHHHHHHHHHhc
Q psy616 384 ---FGSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 384 ---~g~~~Yaaana~l~~la~~~~~~ 406 (1152)
.-.+.|+|+||+-|.|++...+.
T Consensus 144 tp~~PsSPYSASKAasD~lVray~~T 169 (340)
T COG1088 144 TPYNPSSPYSASKAASDLLVRAYVRT 169 (340)
T ss_pred CCCCCCCCcchhhhhHHHHHHHHHHH
Confidence 23468999999999999977653
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=9.9e-07 Score=104.01 Aligned_cols=225 Identities=14% Similarity=0.130 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCC---cccccc
Q psy616 717 PRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGP---VMAINT 793 (1152)
Q Consensus 717 pq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GP---s~tvdt 793 (1152)
....|..+++.+||+++|+++++++ -+++++.. ++. .+ ..+..|...||++.- .+-+..
T Consensus 105 ~~~~La~~Aa~~aL~~ag~~~~dId----~lI~~t~t-~~~--------~P-----~~a~~l~~~LGl~~~~~~~~d~~~ 166 (391)
T PLN03169 105 AVTQMAVEASLACIKEWGRPVSDIT----HLVYVSSS-EAR--------LP-----GGDLYLAKQLGLSPDVQRVMLYFL 166 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCC----EEEEECcC-CCC--------CC-----cHHHHHHHHhCcCCcceeeecccC
Confidence 3456889999999999999888775 45555442 221 11 235578888999753 467889
Q ss_pred cchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchh
Q psy616 794 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRA 873 (1152)
Q Consensus 794 aCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A 873 (1152)
+|++++.||..|...|++|....|||.+++.. +.. +. .++ .-+ ++.......+|+|++++||++...+
T Consensus 167 gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~-s~~----~~-----~~~-~~~-~~d~~~~~lFGDGAaA~vl~~~~~~ 234 (391)
T PLN03169 167 GCSGGVAGLRVAKDIAENNPGSRVLLTTSETT-ILG----FR-----PPS-PDR-PYDLVGAALFGDGAAAVIIGADPIP 234 (391)
T ss_pred hhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcC-hhh----cc-----CCC-ccc-hhhhhhhhhccCceEEEEEecCCCc
Confidence 99999999999999999999999999999973 111 10 010 001 1222345678999999999864432
Q ss_pred hcCCCceEEEEEEEE-------------EecCCCC--CCCCCCC--HHHHHHHHHHHHHHcCCCCCCcc--EEEecCCCC
Q psy616 874 LSDGDPIHAIIRGSG-------------INYDGKT--NGITAPN--GISQTELIKSVYKKSNLNPEDIN--YIITHGTGT 934 (1152)
Q Consensus 874 ~~dgd~i~avI~g~a-------------~~~dG~~--~~~~~P~--~~~q~~~i~~al~~Agi~p~dI~--yve~hgtgT 934 (1152)
. .+..++....... +..+|.. .+-..|+ ......+++++|+++|++++||+ ++-.|=.+.
T Consensus 235 ~-~~~~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~ 313 (391)
T PLN03169 235 V-SESPFFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGP 313 (391)
T ss_pred c-cCCcceEEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCH
Confidence 1 0112222111111 0001100 0111121 22345678999999999999898 888886553
Q ss_pred CCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHH
Q psy616 935 KLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSL 980 (1152)
Q Consensus 935 ~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~l 980 (1152)
. =++++.+.++-...+ +... .+=...||+-+|+=..-|
T Consensus 314 ~-----il~~v~~~Lgl~~ek---~~~s~~~l~~~GNtsSasip~~L 352 (391)
T PLN03169 314 A-----ILNRLEKKLKLAPEK---LECSRRALMDYGNVSSNTIVYVL 352 (391)
T ss_pred H-----HHHHHHHHcCCCHHH---HHHHHHHHHHhCCchHhHHHHHH
Confidence 3 334455554422111 1110 112356998877644333
|
|
| >PRK09184 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.3e-07 Score=86.46 Aligned_cols=74 Identities=23% Similarity=0.380 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHhCC---CCcccccCCCc--cccCCchHHHHHHHHHHHHhcCcccCc---eecccCCCHHHHHHHHHH
Q psy616 504 FIENDIKNHICNILNT---KKSEIYKNKNL--ADYGFDSISLAEFSRILSKFYSLDIMP---SIFFSYSTLERLITYFIK 575 (1152)
Q Consensus 504 ~~~~~l~~~ia~~L~~---~~~~i~~~~~f--~elGlDSL~aveL~~~l~~~fgv~L~~---~~lf~~~Ti~~La~~L~~ 575 (1152)
.+...|++.+++.|++ ++++|.++.+| -+||+|||-+++|...++++||++++. ..++..+|+++|++|+.+
T Consensus 6 ~l~~~l~~~I~e~l~~~~i~~~~I~~d~~l~~~dLglDSld~velv~~lE~~fgi~i~~~~~~~~~~~~TV~~l~~~I~~ 85 (89)
T PRK09184 6 ALERELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALAAYVAA 85 (89)
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHCCCCcccccccCCCcHHHHHHHHHHHHHHHCCcCCCcchhhhhccCCHHHHHHHHHH
Confidence 4677899999999985 88999999998 359999999999999999999999974 446678999999999987
Q ss_pred hh
Q psy616 576 NH 577 (1152)
Q Consensus 576 ~~ 577 (1152)
+.
T Consensus 86 ~~ 87 (89)
T PRK09184 86 HR 87 (89)
T ss_pred hh
Confidence 53
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.1e-06 Score=103.30 Aligned_cols=213 Identities=17% Similarity=0.185 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCs 796 (1152)
.-+.++++.+||+++ ++++++ -+++|+..+.+. ....+..|...||+++ +.+-+..+|+
T Consensus 50 ~~la~~Aa~~aL~~a--~~~~Id----~li~~t~s~~~~-------------~~s~a~~v~~~Lgl~~~~~~~dv~~aC~ 110 (379)
T TIGR01835 50 VTMAASAAKPILDRN--DKQKID----MVIFGTESGIDQ-------------SKAAAVYVHGLLGLQPFCRSFELKQACY 110 (379)
T ss_pred HHHHHHHHHHHHHhC--CHhhCC----EEEEEeCCCCCC-------------CCCHHHHHHHHhCCCCCceEEEeccccH
Confidence 478899999999998 565554 566777654321 1136778999999976 7888999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
+++.||+.|+..|++|..+.|||.+++.... . + ....-...|+|++++||.+-
T Consensus 111 gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~----------~---~--------~~~~~~~~GdGA~A~Ll~~~------ 163 (379)
T TIGR01835 111 GATAALQMAKGHVALSPDRKVLVIASDIAKY----------G---L--------ESPGEPTQGAGAVAMLVSAD------ 163 (379)
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEeehhhc----------c---c--------CCCCCccccCccEEEEEecC------
Confidence 9999999999999999999999999986200 0 0 01112457999999999752
Q ss_pred CCceEEEEEEEEEecCCC-----CCCCCCC--CH--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy616 877 GDPIHAIIRGSGINYDGK-----TNGITAP--NG--------ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~-----~~~~~~P--~~--------~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E 941 (1152)
.+|..+-.++....+.. ..+-..| ++ .....++++.++++|++++||+|+-.|-.-++++-
T Consensus 164 -~~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~--- 239 (379)
T TIGR01835 164 -PKLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGL--- 239 (379)
T ss_pred -CCeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHH---
Confidence 23433321222112111 1111122 11 12346778888999999999999999986665432
Q ss_pred HHHHHHHhcccCCCC-Cce------eeeccCCCCCccccchhhHHHHHH
Q psy616 942 INALHDVFKNKTYNQ-KFC------AITSNKSNIGHTFAASGLVSLINL 983 (1152)
Q Consensus 942 ~~al~~~f~~~~~~~-~~~------~igsvKsniGH~~~AaG~~~lik~ 983 (1152)
+++.+++....... ..+ .+ -.-..+||+.+|+=..+|...
T Consensus 240 -k~~~~~l~~~~~~~~~~~~~~~~~s~-~~~~~~GN~~sas~~l~L~~~ 286 (379)
T TIGR01835 240 -KALRHILKKNYEDEDESVQNAYLESI-IYNREVGNLYTGSLYLGLASL 286 (379)
T ss_pred -HHHHHHHhhcccccHHHHHHHhhhhh-hhhhhcCchHhHHHHHHHHHH
Confidence 23223222110000 000 00 012378999999877777654
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.1e-06 Score=103.28 Aligned_cols=163 Identities=14% Similarity=0.047 Sum_probs=106.2
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
....++++|||||+|-||..++++|.++|..+ +.+.|.... . +......+.++.+|++|.+.+..++.
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V-~~v~r~~~~--~---~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 84 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEGHYI-IASDWKKNE--H---MSEDMFCHEFHLVDLRVMENCLKVTK------ 84 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCCCEE-EEEEecccc--c---cccccccceEEECCCCCHHHHHHHHh------
Confidence 34567899999999999999999999998754 444443211 0 11111124578899999877665542
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc----------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL---------- 381 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~---------- 381 (1152)
.+|.|||+|+... ........ ....+..|+.++.+|.+++.. .....||++||...+-
T Consensus 85 -~~D~Vih~Aa~~~-~~~~~~~~---~~~~~~~N~~~t~nll~aa~~-------~~vk~~V~~SS~~vYg~~~~~~~~~~ 152 (370)
T PLN02695 85 -GVDHVFNLAADMG-GMGFIQSN---HSVIMYNNTMISFNMLEAARI-------NGVKRFFYASSACIYPEFKQLETNVS 152 (370)
T ss_pred -CCCEEEEcccccC-CccccccC---chhhHHHHHHHHHHHHHHHHH-------hCCCEEEEeCchhhcCCccccCcCCC
Confidence 4799999998653 11111111 233566799999999998532 2456799999964211
Q ss_pred -------CCCCChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcc
Q psy616 382 -------GDFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 382 -------g~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 424 (1152)
+......|+.+|...+.+++..... ++ +++.+..+.+
T Consensus 153 ~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~------~~~ilR~~~v 197 (370)
T PLN02695 153 LKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGI------ECRIGRFHNI 197 (370)
T ss_pred cCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CEEEEEECCc
Confidence 1113457999999999988775443 33 5666655443
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.4e-06 Score=102.95 Aligned_cols=346 Identities=11% Similarity=0.123 Sum_probs=196.2
Q ss_pred CcEEEEeeeeccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCC----
Q psy616 631 ELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFF---- 705 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f---- 705 (1152)
-+..|.|++..+|.- -..+++++.+..=-+. ...|..+-.....+.. ..+..++....+++...++.++
T Consensus 19 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~-----sgI~~R~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PLN03170 19 GPATVLAIGTATPANCVHQADYPDYYFRITKS-EHMTELKEKFKRMCDK-----SQIRKRYMHLTEEYLAENPNMCAYMA 92 (401)
T ss_pred CCeEEEEEeecCCCccccHHHHHHHHHHHccc-cCchhHHHHHHHHHHh-----CCCCceeEeccccchhhCccccccCC
Confidence 346799999999984 5666677766542211 1112111001112221 1222233222122222223333
Q ss_pred -CCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC
Q psy616 706 -EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL 784 (1152)
Q Consensus 706 -~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l 784 (1152)
.+..+.....+-.-.|..+++.+||++||+++++++ -+++.++.+.. . ..++.+|...||+
T Consensus 93 p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg~~---------~-----Ps~a~~l~~~LGl 154 (401)
T PLN03170 93 PSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKIT----HLVFCTTSGVD---------M-----PGADYQLTKMLGL 154 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCC---------C-----ChHHHHHHHHhCc
Confidence 556666666666777899999999999999887775 44455443311 1 2367889999999
Q ss_pred CCC---cccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccc
Q psy616 785 KGP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 861 (1152)
Q Consensus 785 ~GP---s~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG 861 (1152)
+.- .+-+..+|++++.+|..|.+.+++|....+||.++++... . |. .++. .+ .+..-....+|+|
T Consensus 155 ~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~-~----~~-----~~~~-~~-~~~~~~~~LFGDG 222 (401)
T PLN03170 155 RPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAV-T----FR-----GPSE-SH-LDSMVGQALFGDG 222 (401)
T ss_pred CcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhh-c----cC-----Cccc-ch-hhhhhhhhhhhce
Confidence 864 5789999999999999999999999999999999998331 0 10 1110 00 1112224578999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEEE--------------EecCCCCCCC--CCCC--HHHHHHHHHHHHHHcCCCCCC
Q psy616 862 VVAVVLKRLSRALSDGDPIHAIIRGSG--------------INYDGKTNGI--TAPN--GISQTELIKSVYKKSNLNPED 923 (1152)
Q Consensus 862 ~~~vvLk~l~~A~~dgd~i~avI~g~a--------------~~~dG~~~~~--~~P~--~~~q~~~i~~al~~Agi~p~d 923 (1152)
++++||.+.+... -.... ..+.+.+ +..+|....+ ..|. ......+++++|+++|++++|
T Consensus 223 AaAvVl~~~~~~~-~~~~~-~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~d 300 (401)
T PLN03170 223 AAAVIVGADPDER-VERPL-FQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYN 300 (401)
T ss_pred eEEEEEecCCccc-ccCCc-eEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 9999998643220 00111 1122211 1111211001 0111 223456788999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceee-eccCCCCCccccchhhHHHHHHHH-hhhcCCcCCCCCCCCC
Q psy616 924 INYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINLVQ-SIKYKIIPASLHCEKE 1001 (1152)
Q Consensus 924 I~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~i-gsvKsniGH~~~AaG~~~lik~~l-~l~~~~ipp~~~~~~~ 1001 (1152)
|+++-.|=-|.. =++++.+.++-...+ +.. -.+=...||+-+|+=+..|-+..- .++.|.+.+
T Consensus 301 i~~~v~Hqgg~~-----il~~v~~~Lgl~~~~---~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~------- 365 (401)
T PLN03170 301 SIFWVAHPGGPA-----ILDQVEAKVGLEKER---MRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATT------- 365 (401)
T ss_pred cCeEEecCCcHH-----HHHHHHHHcCCChHH---HHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCC-------
Confidence 999999955443 344555555432211 110 012346799888775555544321 112222211
Q ss_pred CcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccccc
Q psy616 1002 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYIS 1052 (1152)
Q Consensus 1002 np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~ 1052 (1152)
..........+||.|=+-..++|+..+.
T Consensus 366 -----------------------G~~~~~~ll~afGpG~t~~~~ll~~~~~ 393 (401)
T PLN03170 366 -----------------------GEGFDWGVLFGFGPGLTVETVVLHSVPI 393 (401)
T ss_pred -----------------------CCCccEEEEEEeCchHhHHhHHheeccc
Confidence 0011346788999988888888886443
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.7e-07 Score=103.36 Aligned_cols=145 Identities=13% Similarity=0.016 Sum_probs=99.4
Q ss_pred EEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEEE
Q psy616 240 LITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLH 319 (1152)
Q Consensus 240 LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvIh 319 (1152)
|||||+|-||..+++.|.++|..++++..+ ..+|++|.+++.++++.. .+|.|||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih 55 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYVIL 55 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence 699999999999999999998866655322 148999999888877652 5799999
Q ss_pred cccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC----------------
Q psy616 320 IAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---------------- 383 (1152)
Q Consensus 320 ~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~---------------- 383 (1152)
+|+... ...-... +-...++.|+.++.+|.+++.. .....||++||.. ++|.
T Consensus 56 ~A~~~~-~~~~~~~---~~~~~~~~n~~~~~~ll~~~~~-------~~~~~~i~~SS~~-vyg~~~~~~~~E~~~~~~~~ 123 (306)
T PLN02725 56 AAAKVG-GIHANMT---YPADFIRENLQIQTNVIDAAYR-------HGVKKLLFLGSSC-IYPKFAPQPIPETALLTGPP 123 (306)
T ss_pred eeeeec-ccchhhh---CcHHHHHHHhHHHHHHHHHHHH-------cCCCeEEEeCcee-ecCCCCCCCCCHHHhccCCC
Confidence 998743 1111111 2234677899999999998532 2456799999964 3331
Q ss_pred -CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 384 -FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 384 -~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
+....|+.+|...+.+++...+.. +.+++.+..+.+-+
T Consensus 124 ~p~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~~R~~~vyG 162 (306)
T PLN02725 124 EPTNEWYAIAKIAGIKMCQAYRIQY-----GWDAISGMPTNLYG 162 (306)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHh-----CCCEEEEEecceeC
Confidence 111249999999998876554321 23667776655443
|
|
| >PRK06060 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.1e-07 Score=121.61 Aligned_cols=77 Identities=13% Similarity=0.301 Sum_probs=69.7
Q ss_pred hHHHHHHHHHHHHHHhCCC-CcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 502 EKFIENDIKNHICNILNTK-KSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~-~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
...+.+.+.+.++++|+.+ ++.|+.+++|++||+|||++++|+++|++.||++|+++.+|+|||+.+|++||.+.+.
T Consensus 543 ~~~~~~~v~~~~a~vl~~~~~~~i~~~~~f~~lG~dSl~av~l~~~l~~~~g~~l~~~~~~~~pt~~~la~~l~~~~~ 620 (705)
T PRK06060 543 QRLVVDAVCAEAAKMLGEPDPWSVDQDLAFSELGFDSQMTVTLCKRLAAVTGLRLPETVGWDYGSISGLAQYLEAELA 620 (705)
T ss_pred HHHHHHHHHHHHHHHhCCCChhhCCCCCChhhcCchHHHHHHHHHHHHHHhCCCCCceeeecCCCHHHHHHHHHHHhc
Confidence 3445677899999999985 5679999999999999999999999999999999999999999999999999987653
|
|
| >TIGR00517 acyl_carrier acyl carrier protein | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.6e-07 Score=84.12 Aligned_cols=72 Identities=21% Similarity=0.298 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.+.+++.+++.+++++++|+.+.+| .++|+|||..++|...|+++||++++...+.+..|+.++++|+.++
T Consensus 4 i~~~l~~il~~~~~~~~~~i~~~~~l~~dlglDSl~~veli~~lE~~f~i~i~~~~~~~~~tv~~l~~~i~~~ 76 (77)
T TIGR00517 4 IFEKVKAIIKEQLNVDEDQVTPDASFVEDLGADSLDTVELVMALEEEFDIEIPDEEAEKIATVGDAVDYIEEN 76 (77)
T ss_pred HHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHCCcHHHHHHHHHhc
Confidence 56789999999999999999999998 5799999999999999999999999999999999999999999653
|
S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.5e-06 Score=98.35 Aligned_cols=126 Identities=17% Similarity=0.130 Sum_probs=92.3
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
+|||||+|.||..++++|.++|. .|+++.|+ .+|+.|.++++++++.. .+|.||
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~-~v~~~~r~--------------------~~d~~~~~~~~~~~~~~-----~~d~vi 55 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGR-VVVALTSS--------------------QLDLTDPEALERLLRAI-----RPDAVV 55 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCC-EEEEeCCc--------------------ccCCCCHHHHHHHHHhC-----CCCEEE
Confidence 79999999999999999999987 45555553 47999999998887652 589999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-----------CCCh
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-----------FGSC 387 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-----------~g~~ 387 (1152)
|+||... ... ........+..|+.++.++.+++.. .+ ..||++||.+.+-+. ....
T Consensus 56 ~~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-------~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 122 (287)
T TIGR01214 56 NTAAYTD-VDG----AESDPEKAFAVNALAPQNLARAAAR-------HG-ARLVHISTDYVFDGEGKRPYREDDATNPLN 122 (287)
T ss_pred ECCcccc-ccc----cccCHHHHHHHHHHHHHHHHHHHHH-------cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcc
Confidence 9998654 211 1223456788999999999998532 12 258888986432111 1245
Q ss_pred hhhHHHHHHHHHHHHH
Q psy616 388 DYAMGNRFQTVYAKYL 403 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~ 403 (1152)
.|+.+|...+.+++..
T Consensus 123 ~Y~~~K~~~E~~~~~~ 138 (287)
T TIGR01214 123 VYGQSKLAGEQAIRAA 138 (287)
T ss_pred hhhHHHHHHHHHHHHh
Confidence 7999999998888654
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.53 E-value=8.3e-07 Score=101.58 Aligned_cols=159 Identities=18% Similarity=0.166 Sum_probs=105.9
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
+|||||+|-||..++++|.++|..++.+........... ..+..+.+|++|.+.+.+.+.. .. |.||
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~----~~--d~vi 69 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKG----VP--DAVI 69 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhc----CC--CEEE
Confidence 899999999999999999999875555544333221111 4577889999998544444332 11 9999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC----CCCh-------
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----FGSC------- 387 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~----~g~~------- 387 (1152)
|+|+... .. ....+ .....+.+|+.|+.++.+++. ......||+.||.+...+. +-.-
T Consensus 70 h~aa~~~-~~-~~~~~--~~~~~~~~nv~gt~~ll~aa~-------~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p 138 (314)
T COG0451 70 HLAAQSS-VP-DSNAS--DPAEFLDVNVDGTLNLLEAAR-------AAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRP 138 (314)
T ss_pred EccccCc-hh-hhhhh--CHHHHHHHHHHHHHHHHHHHH-------HcCCCeEEEeCCCceECCCCCCCCcccccCCCCC
Confidence 9998765 21 11111 345688999999999999953 2355678886665544432 1111
Q ss_pred --hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 388 --DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 388 --~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
.|+.+|...+.+++..... .+.+++.+.++.+-+
T Consensus 139 ~~~Yg~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~vyG 174 (314)
T COG0451 139 LNPYGVSKLAAEQLLRAYARL-----YGLPVVILRPFNVYG 174 (314)
T ss_pred CCHHHHHHHHHHHHHHHHHHH-----hCCCeEEEeeeeeeC
Confidence 3999999999998877652 123677777664433
|
|
| >KOG1389|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.9e-07 Score=97.69 Aligned_cols=227 Identities=23% Similarity=0.330 Sum_probs=146.8
Q ss_pred HHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHc-CC--CCCcccccccchhHHHHH
Q psy616 726 SWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFM-DL--KGPVMAINTACSSSLVAT 802 (1152)
Q Consensus 726 a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~-~l--~GPs~tvdtaCsSsl~Al 802 (1152)
....+|+-+++|..+.. |.+|..-.. +. .....|++.++ |+ +=|.++|+--|||+|.|+
T Consensus 69 l~a~ie~t~~dp~~igd----i~vG~vL~p------------g~--ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaV 130 (435)
T KOG1389|consen 69 LRAVIEKTNLDPSLIGD----IVVGTVLAP------------GS--GASECRMAAFYAGFPETVPVRTVNRQCSSGLQAV 130 (435)
T ss_pred HHHHHhhcCCCHHHhcc----eeeeeccCC------------Cc--chHHHHHHHHHcCCCcccchhhhhhhhhhHHHHH
Confidence 34556888887766653 455543211 11 13455665553 44 559999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEeccccCcCHH--H--------HHH-------HHhcCCCC------------------------
Q psy616 803 HIACQSLRQHECDTAISAGVNLMISPE--A--------YIA-------MTSAGMLS------------------------ 841 (1152)
Q Consensus 803 ~~A~~~l~~G~~d~alvgGv~~~~~~~--~--------~~~-------~~~~g~ls------------------------ 841 (1152)
..=...|++|..|.-|++|++.+.+-+ . ... +--+|..|
T Consensus 131 adiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kk 210 (435)
T KOG1389|consen 131 ADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKK 210 (435)
T ss_pred HHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhhhHHHHHHHHH
Confidence 999999999999999999999754431 0 000 11122221
Q ss_pred -----------------------CCCCccc------------------------CCCCCCCcc-------cccccEEEEE
Q psy616 842 -----------------------PDGKCYV------------------------FDERANGLV-------PSEAVVAVVL 867 (1152)
Q Consensus 842 -----------------------~~g~~~~------------------------Fd~~a~G~v-------~gEG~~~vvL 867 (1152)
+.|.-+| |-+ ||.. .++|+++|+|
T Consensus 211 Aa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkk--dGttTagNsSQvSDGa~aVLL 288 (435)
T KOG1389|consen 211 AAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLL 288 (435)
T ss_pred HHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhc--CCccccCchhhcccchhhhhh
Confidence 1111111 111 2222 4789999999
Q ss_pred cccchhhcCCCceEEEEEEEEEe-cCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHH
Q psy616 868 KRLSRALSDGDPIHAIIRGSGIN-YDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALH 946 (1152)
Q Consensus 868 k~l~~A~~dgd~i~avI~g~a~~-~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~ 946 (1152)
.+.+.|.+-|-+|+++.+.+++- -+..-.|+ +-+-+|-.+++.+|+..+||||+|.. |.=|-.
T Consensus 289 mkRs~A~qlgLPvlgvfr~f~~vGv~P~iMGi------GPavAIp~alk~aGL~v~did~FEIN----------EAFAsQ 352 (435)
T KOG1389|consen 289 MKRSVAMQLGLPVLGVFRDFAAVGVPPAIMGI------GPAVAIPKALKAAGLEVDDIDLFEIN----------EAFASQ 352 (435)
T ss_pred hhhhhHhhcCCceeEEeeeeeeecCCHHHcCC------CchhhhHHHHHHcCCcccccceeehh----------HHHHHH
Confidence 99999999999999999988653 12122221 12557899999999999999999985 555555
Q ss_pred HHhcccCCC---CCceeeeccCCCCCccccchhhHHHHHHHHhhhc
Q psy616 947 DVFKNKTYN---QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 989 (1152)
Q Consensus 947 ~~f~~~~~~---~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~ 989 (1152)
-+|+...-. .+.-+-|..- -|||+.+|+|.-.++-.+--|++
T Consensus 353 ~~yc~~KL~ld~ekVN~~GGai-AlGHPlGatGAR~VaTlL~emKr 397 (435)
T KOG1389|consen 353 ALYCRNKLGLDPEKVNVNGGAI-ALGHPLGATGARCVATLLHEMKR 397 (435)
T ss_pred HHHHHHHhCCCHHHcCCCCcee-eccCCcCCccHhHHHHHHHHHHh
Confidence 555532100 0000111111 37999999999998888877876
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.3e-06 Score=102.67 Aligned_cols=305 Identities=11% Similarity=0.126 Sum_probs=169.5
Q ss_pred CcEEEEeeeeccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCC-CC----CCCCcC
Q psy616 631 ELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPG-ID----EFDPLF 704 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~----~FD~~~ 704 (1152)
-+..|.|++..+|.- -..+++++.+..--.. ...|..+-.....+.. ..+..++-...++ ++ .+|..+
T Consensus 15 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~-----sgI~~R~~~~~~~~~~~~~~~~~~~~ 88 (391)
T PLN03173 15 GPATIMAIGTSTPPNCVDQSTYPDYYFRITNS-EHKVELKEKFKRMCEK-----SMIKKRYMHLTEEILKENPSVCEYMA 88 (391)
T ss_pred CCeEEEEEEccCCCcccCHHHHHHHHHHHhcc-ccchhHHHHHHHHHHh-----CCCCeeeEeccchhhhhCcccccccC
Confidence 346799999999984 5666676666542210 0111110001111111 1122222211111 11 112112
Q ss_pred CCCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC
Q psy616 705 FEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL 784 (1152)
Q Consensus 705 f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l 784 (1152)
-.+..+.....+-.-.|..+++.+||+++|+++++++ -+++.++.+.. . ..++.+|...+|+
T Consensus 89 p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~li~~t~t~~~---------~-----P~~a~~l~~~LGl 150 (391)
T PLN03173 89 PSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSGVD---------M-----PGADYQLTKLLGL 150 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCc---------c-----cHHHHHHHHHhCC
Confidence 2444555555555668888999999999999888775 45555443310 1 1367789999999
Q ss_pred CCC---cccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccc
Q psy616 785 KGP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 861 (1152)
Q Consensus 785 ~GP---s~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG 861 (1152)
+.- .+-+..+|++++.+|..|.+.++++....+||.+++++. . . | ..++.+ ..+.--.-..+|+|
T Consensus 151 ~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S-~-~---~-----~~~~d~--~~~~~v~~~LFGDG 218 (391)
T PLN03173 151 RSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITA-V-T---F-----RGPSDT--HLDSLVGQALFGDG 218 (391)
T ss_pred CccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhh-h-h---h-----CCcccc--chhhhhhhhhhcCc
Confidence 873 456799999999999999999999999999999999732 1 0 0 111110 00111224668999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEE-------------EEecCCCCCCC--CCCC--HHHHHHHHHHHHHHcCCCCCCc
Q psy616 862 VVAVVLKRLSRALSDGDPIHAIIRGS-------------GINYDGKTNGI--TAPN--GISQTELIKSVYKKSNLNPEDI 924 (1152)
Q Consensus 862 ~~~vvLk~l~~A~~dgd~i~avI~g~-------------a~~~dG~~~~~--~~P~--~~~q~~~i~~al~~Agi~p~dI 924 (1152)
++++||...+.. .-+.+.+.++... .+...|....+ ..|. ......++++.|++.|++++||
T Consensus 219 AaAvvl~~~~~~-~~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di 297 (391)
T PLN03173 219 AAAIIIGSDPVL-GVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNS 297 (391)
T ss_pred eEEEEEeCCCCC-CcCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 999999863211 0011223222211 11111211001 1121 2234567889999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHH
Q psy616 925 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSL 980 (1152)
Q Consensus 925 ~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~l 980 (1152)
+++-.|=-|-+ =++++.+.++-...+ +... .+=...|++-+|+=..-|
T Consensus 298 ~~~v~Hqgg~~-----Il~~v~~~LgL~~ek---l~~s~~vl~~yGNtSSaSv~~vL 346 (391)
T PLN03173 298 LFWIAHPGGPA-----ILDQVEAKLALKPEK---LRATRHVLSEYGNMSSACVLFIL 346 (391)
T ss_pred CeEEECCCcHH-----HHHHHHHHcCCChHH---HHHHHHHHHHhCcchhhHHHHHH
Confidence 99999966654 344555555432211 1110 123455888777633333
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.4e-06 Score=110.32 Aligned_cols=163 Identities=13% Similarity=0.126 Sum_probs=107.5
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHH-HHHHHHHHHhh
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLK-MISEINSIINN 310 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~-v~~~~~~~~~~ 310 (1152)
.+++++++|||||+|-||..++++|.+++...|+.+.|..... ..+.. ..++.++.+|++|..+ +++++ +
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~---~~~~~-~~~~~~~~gDl~d~~~~l~~~l----~- 381 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI---SRFLG-HPRFHFVEGDISIHSEWIEYHI----K- 381 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh---hhhcC-CCceEEEeccccCcHHHHHHHh----c-
Confidence 4567889999999999999999999987444565556654211 11111 2357888999998654 33333 2
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------ 384 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------ 384 (1152)
.+|.|||+|+... .... ..+. ...+++|+.|+.++.+++.. .. ..||++||... +|..
T Consensus 382 --~~D~ViHlAa~~~-~~~~-~~~~---~~~~~~Nv~~t~~ll~a~~~-------~~-~~~V~~SS~~v-yg~~~~~~~~ 445 (660)
T PRK08125 382 --KCDVVLPLVAIAT-PIEY-TRNP---LRVFELDFEENLKIIRYCVK-------YN-KRIIFPSTSEV-YGMCTDKYFD 445 (660)
T ss_pred --CCCEEEECccccC-chhh-ccCH---HHHHHhhHHHHHHHHHHHHh-------cC-CeEEEEcchhh-cCCCCCCCcC
Confidence 5899999999755 2111 1222 34678999999999998642 12 46889998642 3310
Q ss_pred -------------CChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCccc
Q psy616 385 -------------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 385 -------------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 425 (1152)
....|+.+|...+.+++..... ++ +++.+..+.+-
T Consensus 446 E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~------~~~ilR~~~vy 494 (660)
T PRK08125 446 EDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGL------RFTLFRPFNWM 494 (660)
T ss_pred ccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCC------ceEEEEEceee
Confidence 1236999999999998876543 33 66666654443
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.8e-06 Score=94.24 Aligned_cols=160 Identities=14% Similarity=0.180 Sum_probs=94.0
Q ss_pred EECCchhHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHH--------------hCCCcEEEEEecCCCHH-HH-HHH
Q psy616 241 ITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLK--------------KFNNKAIYIQVDVSDKL-KM-ISE 303 (1152)
Q Consensus 241 ITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~~~~~~~~l~--------------~~g~~v~~~~~Dvsd~~-~v-~~~ 303 (1152)
|||++|=||..+.+.|++++. .+|+++.|........+.+. ....++.++..|++++. -+ .+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999976 37777777754433333331 12578999999999853 01 111
Q ss_pred HHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC
Q psy616 304 INSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD 383 (1152)
Q Consensus 304 ~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~ 383 (1152)
.+.+.+ .+|.|||||+...... .++...++|+.|+.+|.+.+. ......|+++|| +...+.
T Consensus 81 ~~~L~~---~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~-------~~~~~~~~~iST-a~v~~~ 141 (249)
T PF07993_consen 81 YQELAE---EVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAA-------QGKRKRFHYIST-AYVAGS 141 (249)
T ss_dssp HHHHHH---H--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHT-------SSS---EEEEEE-GGGTTS
T ss_pred hhcccc---ccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHH-------hccCcceEEecc-ccccCC
Confidence 222222 4899999998766222 233467799999999999853 222337999999 322221
Q ss_pred C---------------------CChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCccc
Q psy616 384 F---------------------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 384 ~---------------------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 425 (1152)
. ....|..+|..-+.+.+...++ |+ ++..+..|...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~------p~~I~Rp~~i~ 199 (249)
T PF07993_consen 142 RPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGL------PVTIYRPGIIV 199 (249)
T ss_dssp -TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---------EEEEEE-EEE
T ss_pred CCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCc------eEEEEecCccc
Confidence 1 1246999999999998887765 65 66667666553
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.5e-06 Score=99.17 Aligned_cols=302 Identities=13% Similarity=0.125 Sum_probs=167.9
Q ss_pred CcEEEEeeeeccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCC----
Q psy616 631 ELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFF---- 705 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f---- 705 (1152)
-+..|.|++..+|.- -..+++++.+..=.+. ...|..+-.....+.. ..+..++....++...-++.|.
T Consensus 14 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~-----sgI~~R~~~~~~~~~~~~~~~~~~~~ 87 (389)
T PLN03168 14 GPACVLGIGTAVPPAEFLQSEYPDFFFNITNC-GEKEALKAKFKRICDK-----SGIRKRHMFLTEEVLKANPGICTYME 87 (389)
T ss_pred CCeEEEEEeccCCCcccCHHHHHHHHHHhccc-cCcHHHHHHHHHHHHh-----cCCCeeeeeccccchhhCcccccccC
Confidence 446799999999984 5666677665542211 0111110001111111 1122222211111111112222
Q ss_pred -CCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC
Q psy616 706 -EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL 784 (1152)
Q Consensus 706 -~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l 784 (1152)
.+..+.....+---.|..+++.+||++||+++++++ -++++++++ +. . -.++.+|...||+
T Consensus 88 ps~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg-~~--------~-----Ps~a~~l~~~LGl 149 (389)
T PLN03168 88 PSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDIT----HIVFATTSG-VN--------M-----PGADHALAKLLGL 149 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCC-CC--------C-----ccHHHHHHHHhCc
Confidence 344555555556667888999999999999988876 566666554 11 1 1257789999999
Q ss_pred CCC---cccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccc
Q psy616 785 KGP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 861 (1152)
Q Consensus 785 ~GP---s~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG 861 (1152)
+.- .+-+..+|++++.||..|...|++|....+||.+++++. . .+. .++. ...|..-....+|+|
T Consensus 150 ~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S-~----~~~-----~~~~--~~~~~~~~~~LFGDG 217 (389)
T PLN03168 150 KPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTA-V----TYR-----APSE--NHLDGLVGSALFGDG 217 (389)
T ss_pred CCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhh-h----hcc-----Cccc--ccHHHHhccccccCc
Confidence 863 588899999999999999999999999999999999842 1 110 0000 001111235678999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEEEE-e--cCCC------CCCC----CC--CC--HHHHHHHHHHHHHHcCCCCCCc
Q psy616 862 VVAVVLKRLSRALSDGDPIHAIIRGSGI-N--YDGK------TNGI----TA--PN--GISQTELIKSVYKKSNLNPEDI 924 (1152)
Q Consensus 862 ~~~vvLk~l~~A~~dgd~i~avI~g~a~-~--~dG~------~~~~----~~--P~--~~~q~~~i~~al~~Agi~p~dI 924 (1152)
+|++||+.-.... .+..++.+...... - .+|. ..++ .. |. ......++++++...|....|+
T Consensus 218 AaAvvl~~~~~~~-~~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~ 296 (389)
T PLN03168 218 AGVYVVGSDPKPE-VEKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNE 296 (389)
T ss_pred cEEEEEecCCCCc-cCCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 9999998643211 01234444433211 0 1111 0111 11 11 1233566777888888877788
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhh
Q psy616 925 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGL 977 (1152)
Q Consensus 925 ~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~ 977 (1152)
+++-.|=-|-++ ++++.+.++-...+ +... .+=...|++-+|+=.
T Consensus 297 ~~~v~Hqgg~~I-----l~~v~~~Lgl~~ek---~~~s~~vl~~yGNtSSaSv~ 342 (389)
T PLN03168 297 MFWAVHPGGPAI-----LDQVEAKLKLTKDK---MQGSRDILSEFGNMSSASVL 342 (389)
T ss_pred ceEEecCCcHHH-----HHHHHHHcCCCHHH---HHHHHHHHHHhCccHhhhHH
Confidence 888899655543 44455554422111 1110 123456887776633
|
|
| >smart00823 PKS_PP Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.8e-07 Score=81.67 Aligned_cols=74 Identities=18% Similarity=0.337 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcc-cccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 503 KFIENDIKNHICNILNTKKSE-IYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~-i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
..+...+...+...++..... ++.+.+|+++|+||+++++++.++++.|+++++...+|++||+..|+.++.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~dSl~~~~~~~~l~~~~~~~i~~~~~~~~~t~~~l~~~i~~~ 85 (86)
T smart00823 11 RLLLDLVREQVAAVLGHAAAEAIDPDRPFRDLGLDSLTAVELRNRLEAATGLRLPATLVFDHPTPAALAEHLAAE 85 (86)
T ss_pred HHHHHHHHHHHHHHHCCCccccCCCCCCHHHcCchHHHHHHHHHHHHHHHCCCCChHHHHcCCCHHHHHHHHHHh
Confidence 345677888999999987666 48899999999999999999999999999999999999999999999999764
|
Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311. |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=98.46 E-value=5e-06 Score=87.42 Aligned_cols=173 Identities=17% Similarity=0.110 Sum_probs=109.4
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
++|+||+|.+|..+++.|.++|. .|.++.|++..... ...+.++.+|+.|.+++.+++. ..|.||
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi 65 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALK-------GADAVI 65 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc-------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence 68999999999999999999996 55555555432111 5679999999999988776664 589999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC---------hhh
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS---------CDY 389 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~---------~~Y 389 (1152)
|++|... . +...+.++.++ ++ ..+...+|++||........+. ..|
T Consensus 66 ~~~~~~~-~-----------------~~~~~~~~~~a----~~---~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~ 120 (183)
T PF13460_consen 66 HAAGPPP-K-----------------DVDAAKNIIEA----AK---KAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEY 120 (183)
T ss_dssp ECCHSTT-T-----------------HHHHHHHHHHH----HH---HTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHH
T ss_pred hhhhhhc-c-----------------ccccccccccc----cc---ccccccceeeeccccCCCCCcccccccccchhhh
Confidence 9998654 2 03333344444 22 2356689999998766544442 245
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHh
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~ 463 (1152)
...+...+.+. +..+ .+++.+..+...+.. .. ....... ....+...++.++.++++.+++.
T Consensus 121 ~~~~~~~e~~~---~~~~------~~~~ivrp~~~~~~~-~~-~~~~~~~-~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 121 ARDKREAEEAL---RESG------LNWTIVRPGWIYGNP-SR-SYRLIKE-GGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp HHHHHHHHHHH---HHST------SEEEEEEESEEEBTT-SS-SEEEESS-TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HhcC------CCEEEEECcEeEeCC-Cc-ceeEEec-cCCCCcCcCCHHHHHHHHHHHhC
Confidence 55555444333 2333 388888776654432 11 0010000 11223457888999988888764
|
... |
| >PRK07081 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.7e-07 Score=82.68 Aligned_cols=74 Identities=11% Similarity=0.273 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHhCC--CCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceeccc--CCCHHHHHHHHHHhhhh
Q psy616 506 ENDIKNHICNILNT--KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFS--YSTLERLITYFIKNHNN 579 (1152)
Q Consensus 506 ~~~l~~~ia~~L~~--~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~--~~Ti~~La~~L~~~~~~ 579 (1152)
++.+++++.+.++. +++.++.+.+|++||+|||.+++|...|+++||+++|...+.. .+||..|++|+.+...+
T Consensus 2 ~~~i~~ii~~~~~~~~~~~~i~~d~~l~dlGlDSl~~v~li~~lE~~f~I~i~~~~~~~~~~~tv~~l~~~V~~~~~~ 79 (83)
T PRK07081 2 KNTIRTILKKVAKLEVPIDSIADDADLYEAGLSSLATVQLMLAIEDAFDIEIPDEMLNRKLFASIDALAGAVTQLQDA 79 (83)
T ss_pred hHHHHHHHHHHHcCCCCHHhcCCCCCHhhcCCCHHHHHHHHHHHHHHhCCcCCHHHcCHHHhccHHHHHHHHHHHHhh
Confidence 35688888887544 6678999999999999999999999999999999999998875 89999999999876543
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.4e-06 Score=99.49 Aligned_cols=129 Identities=15% Similarity=0.046 Sum_probs=91.5
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
.+|||||+|=||..+++.|.++| . |+.+.|... .+..|++|.+++.++++.. ++|.|
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~-V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V 58 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-N-LIALDVHST----------------DYCGDFSNPEGVAETVRKI-----RPDVI 58 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-C-EEEeccccc----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence 58999999999999999999998 4 555555421 2357999999988887752 57999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------------C
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------G 385 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------------g 385 (1152)
||+|+... .. ..+..+ ...+.+|+.|+.+|.+++.. .. ..||++||..- +|.. .
T Consensus 59 ih~Aa~~~-~~-~~~~~~---~~~~~~N~~~~~~l~~aa~~-------~g-~~~v~~Ss~~V-y~~~~~~p~~E~~~~~P 124 (299)
T PRK09987 59 VNAAAHTA-VD-KAESEP---EFAQLLNATSVEAIAKAANE-------VG-AWVVHYSTDYV-FPGTGDIPWQETDATAP 124 (299)
T ss_pred EECCccCC-cc-hhhcCH---HHHHHHHHHHHHHHHHHHHH-------cC-CeEEEEccceE-ECCCCCCCcCCCCCCCC
Confidence 99998754 21 112222 34567899999999998642 12 35888888543 2221 1
Q ss_pred ChhhhHHHHHHHHHHHHH
Q psy616 386 SCDYAMGNRFQTVYAKYL 403 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~ 403 (1152)
...|+.+|...+.+++..
T Consensus 125 ~~~Yg~sK~~~E~~~~~~ 142 (299)
T PRK09987 125 LNVYGETKLAGEKALQEH 142 (299)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 246999999999888654
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.9e-07 Score=103.10 Aligned_cols=242 Identities=13% Similarity=0.134 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaC 795 (1152)
...+..+++.+||++||+++++++ -+++++...++.. ...+.+|...||++. +.+-|..+|
T Consensus 60 ~~~la~~Aa~~aL~~a~~~~~dId----~lI~~t~t~d~~~-------------P~~a~~v~~~Lg~~~~~~~~di~~~C 122 (353)
T PRK12880 60 VSDLGKHAANTLLQGLNIDKNSLD----ALIVVTQSPDFFM-------------PSTACYLHQLLNLSSKTIAFDLGQAC 122 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCCC-------------CcHHHHHHHHhCCCCCceEEehhhhh
Confidence 467889999999999999988876 5666666544321 235778999999963 678899999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhc
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 875 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~ 875 (1152)
++++.||+.|...|++|..+ +++.+++.. + ..+.++. ...-..+|+|++++||++-+.+
T Consensus 123 ~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~-S----------~~~~~~d-------~~~~~lFGDGAaA~vl~~~~~~-- 181 (353)
T PRK12880 123 AGYLYGLFVAHSLIQSGLGK-ILLICGDTL-S----------KFIHPKN-------MNLAPIFGDGVSATLIEKTDFN-- 181 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCC-EEEEEehhh-h----------ccCCccc-------CCceeeecccceEEEEEecCCC--
Confidence 99999999999999999999 777777652 1 1122221 1224578999999999864322
Q ss_pred CCCceEEEEEEEEEe-------cCCC-CC-------CC------------CCCC-H-------HHHHHHHHHHHHHcCCC
Q psy616 876 DGDPIHAIIRGSGIN-------YDGK-TN-------GI------------TAPN-G-------ISQTELIKSVYKKSNLN 920 (1152)
Q Consensus 876 dgd~i~avI~g~a~~-------~dG~-~~-------~~------------~~P~-~-------~~q~~~i~~al~~Agi~ 920 (1152)
..++ .+..-+.. .+|. .. .. ...+ . .....+++++|+++|++
T Consensus 182 --~~~~-~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~ 258 (353)
T PRK12880 182 --EAFF-ELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVD 258 (353)
T ss_pred --CceE-EEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1111 11110000 0010 00 00 0001 1 11136789999999999
Q ss_pred CCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCC
Q psy616 921 PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEK 1000 (1152)
Q Consensus 921 p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~ 1000 (1152)
++||+++-.|=.+ .-=++++.+.++-...+ ++. .+=...|++-+|+=...|-.. ++.+
T Consensus 259 ~~did~~v~HQ~~-----~~i~~~i~~~Lgl~~ek---~~~-~~l~~~GNtssasip~~L~~~---~~~~---------- 316 (353)
T PRK12880 259 EKDIAFHLFHQSN-----AYLVDCIKEELKLNDDK---VPN-FIMEKYANLSACSLPALLCEL---DTPK---------- 316 (353)
T ss_pred HHHCCEEEECCCC-----HHHHHHHHHHhCCCHHH---hhh-hhHHhhCCHHHHHHHHHHHHH---HHcC----------
Confidence 9999999999444 44555666666532211 211 112346887766533333222 1110
Q ss_pred CCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1001 ENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1001 ~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+.+ ....+||.|=+-+.++|+=
T Consensus 317 --------------------------~~~-~ll~~~G~G~s~g~~ll~~ 338 (353)
T PRK12880 317 --------------------------EFK-ASLSAFGAGLSWGSAVLNF 338 (353)
T ss_pred --------------------------CcE-EEEEEEchhhhheEeEEEE
Confidence 112 4688899988999998873
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.8e-06 Score=102.17 Aligned_cols=126 Identities=17% Similarity=0.194 Sum_probs=85.9
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcC--CcEEEEecCCcchH----HHHHHH---------Hh-CC--------CcEE
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKY--STNLILSGRSKLNS----IIYKKL---------KK-FN--------NKAI 288 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~G--a~~vil~~R~~~~~----~~~~~l---------~~-~g--------~~v~ 288 (1152)
+-.+++++||||+|-||..+++.|++.+ ..+|+++.|....+ .+..++ ++ .+ .++.
T Consensus 8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 4468999999999999999999998764 34677777754321 111111 11 11 4789
Q ss_pred EEEecCCC-------HHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy616 289 YIQVDVSD-------KLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTIL 361 (1152)
Q Consensus 289 ~~~~Dvsd-------~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~ 361 (1152)
++..|+++ .+.++.+++ .+|.|||+|+... .. +.....+++|+.|+.+|.+++..
T Consensus 88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~-~~-------~~~~~~~~~Nv~gt~~ll~~a~~--- 149 (491)
T PLN02996 88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN-FD-------ERYDVALGINTLGALNVLNFAKK--- 149 (491)
T ss_pred EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC-Cc-------CCHHHHHHHHHHHHHHHHHHHHh---
Confidence 99999984 333444332 4899999998754 21 23566889999999999988532
Q ss_pred HhcCCCCCEEEEecCCcc
Q psy616 362 KLQKNKLDFVCYFSSSSA 379 (1152)
Q Consensus 362 ~~~~~~~~~iV~~SS~a~ 379 (1152)
......||++||...
T Consensus 150 ---~~~~k~~V~vST~~v 164 (491)
T PLN02996 150 ---CVKVKMLLHVSTAYV 164 (491)
T ss_pred ---cCCCCeEEEEeeeEE
Confidence 123567888888654
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.2e-06 Score=98.65 Aligned_cols=158 Identities=12% Similarity=0.116 Sum_probs=102.8
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCC-CHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVS-DKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvs-d~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||+|=||..++++|++++...|+.+.|+.. . ...+.. ...+.++.+|++ +.+.+.++++ .+|
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~--~-~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~d 70 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTD--R-LGDLVN-HPRMHFFEGDITINKEWIEYHVK-------KCD 70 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHH--H-HHHhcc-CCCeEEEeCCCCCCHHHHHHHHc-------CCC
Confidence 469999999999999999999874346666666432 1 112211 235788899998 6665544432 489
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-CC---------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-FG--------- 385 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-~g--------- 385 (1152)
.|||+|+... .... .. +-...+++|+.|+.++.+++.. .. ..||+.||... +|. .+
T Consensus 71 ~ViH~aa~~~-~~~~-~~---~p~~~~~~n~~~~~~ll~aa~~-------~~-~~~v~~SS~~v-yg~~~~~~~~ee~~~ 136 (347)
T PRK11908 71 VILPLVAIAT-PATY-VK---QPLRVFELDFEANLPIVRSAVK-------YG-KHLVFPSTSEV-YGMCPDEEFDPEASP 136 (347)
T ss_pred EEEECcccCC-hHHh-hc---CcHHHHHHHHHHHHHHHHHHHh-------cC-CeEEEEeccee-eccCCCcCcCccccc
Confidence 9999998654 2111 11 2245678999999999888532 12 46999999743 331 10
Q ss_pred ---------ChhhhHHHHHHHHHHHHHHh-cccccCCCceEEEEeCCccc
Q psy616 386 ---------SCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 386 ---------~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~ 425 (1152)
...|+.+|.+.+.+++.... .++ +++.+..+.+-
T Consensus 137 ~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~------~~~ilR~~~v~ 180 (347)
T PRK11908 137 LVYGPINKPRWIYACSKQLMDRVIWAYGMEEGL------NFTLFRPFNWI 180 (347)
T ss_pred cccCcCCCccchHHHHHHHHHHHHHHHHHHcCC------CeEEEeeeeee
Confidence 12599999999988876543 333 55556554443
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.4e-05 Score=88.64 Aligned_cols=175 Identities=15% Similarity=0.164 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccccccchh
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 797 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCsS 797 (1152)
...|+.+++.+||+|||+++++++ -+|+|...+. .+.++.++..+| =|.+-|.+||||
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID----~i~vGdL~nQ----------------~ipssfvar~LG--IP~~gV~gACST 111 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQ----FFLAGDLMNQ----------------ITPTSFAARTLG--IPYLGLFGACST 111 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCC----------------cCcHHHHHHHhC--CCccceeecCHH
Confidence 457899999999999999998887 6777754311 223445666666 577999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCC
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 877 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dg 877 (1152)
+..||.+|...|++|.+|.+||+-.+-.-+.+..+-| =-.=|.-||..+ .=+| -|+|++||.+. .++
T Consensus 112 g~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~-----P~eyG~Qrp~ta--qwTv--Tgaga~~l~~~----~~~ 178 (334)
T PRK12404 112 SMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRY-----PTEYGGQKPPTA--QWTV--TGAGAAILSKT----GDG 178 (334)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccC-----cccccCcCCCcc--cEEE--EceEEEEEecC----CCC
Confidence 9999999999999999999999998876665543322 111233445432 2233 46677777653 234
Q ss_pred CceEEEEEEEEEecCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 878 DPIHAIIRGSGINYDGKTNGITAPN------GISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 878 d~i~avI~g~a~~~dG~~~~~~~P~------~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
-+|-++=-|--+- .|+..|+ .++-.+.|.+=+++-|.+|+|-|.|-+-.-
T Consensus 179 ~~i~~~T~Gkv~D-----~g~~d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDL 234 (334)
T PRK12404 179 PRVTSATIGRVVD-----MGLTDPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDL 234 (334)
T ss_pred ceEEEEEEEEEEe-----cCCCCcccchhhhhHHHHHHHHHHHHHhCCChhhccEEEEcch
Confidence 4443332332221 2344443 345578899999999999999999987433
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.1e-06 Score=100.47 Aligned_cols=142 Identities=18% Similarity=0.223 Sum_probs=95.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++.+|||||+|-||..++++|.++|..++++..... ..+.....+. ..++.++..|+.++. + -.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~--~~~~~~i~~D~~~~~-----l-------~~ 183 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS--NPNFELIRHDVVEPI-----L-------LE 183 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc--CCceEEEECCccChh-----h-------cC
Confidence 5688999999999999999999999886555432211 1111111111 235777889987752 1 14
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC---------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 384 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~--------- 384 (1152)
+|.|||+|+... .. ....+ -...+++|+.|+.+|.+++... .. .||++||...+ |..
T Consensus 184 ~D~ViHlAa~~~-~~-~~~~~---p~~~~~~Nv~gt~nLleaa~~~-------g~-r~V~~SS~~VY-g~~~~~p~~E~~ 249 (442)
T PLN02206 184 VDQIYHLACPAS-PV-HYKFN---PVKTIKTNVVGTLNMLGLAKRV-------GA-RFLLTSTSEVY-GDPLQHPQVETY 249 (442)
T ss_pred CCEEEEeeeecc-hh-hhhcC---HHHHHHHHHHHHHHHHHHHHHh-------CC-EEEEECChHHh-CCCCCCCCCccc
Confidence 899999998654 11 11112 3467899999999999986421 22 58889987533 211
Q ss_pred --------CChhhhHHHHHHHHHHHHHH
Q psy616 385 --------GSCDYAMGNRFQTVYAKYLN 404 (1152)
Q Consensus 385 --------g~~~Yaaana~l~~la~~~~ 404 (1152)
....|+.+|...+.++....
T Consensus 250 ~~~~~P~~~~s~Y~~SK~~aE~~~~~y~ 277 (442)
T PLN02206 250 WGNVNPIGVRSCYDEGKRTAETLTMDYH 277 (442)
T ss_pred cccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 13579999999999887643
|
|
| >PRK07117 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.3e-07 Score=80.05 Aligned_cols=74 Identities=20% Similarity=0.235 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHh-CCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 503 KFIENDIKNHICNIL-NTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L-~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.+.+.+++.+++.+ ++++++|.++.+|.+||+|||-.+++...++++||+++|...+-+-.|+.++++||.++
T Consensus 4 ~ei~~~v~~ii~e~~p~i~~~~I~~~~~l~DLg~DSlD~veiv~~led~f~i~I~~~~~~~i~Tv~d~v~~i~~~ 78 (79)
T PRK07117 4 QRIFDILVRHIREVLPDLDQHQFQPEDSLVDLGANSMDRAEIVIMTLESLSLKIPLVEFAGAKNIGELADLLYAK 78 (79)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHCCCCCChhhcCCChHHHHHHHHHHHHHHCCccCHHHHHhcCCHHHHHHHHHHh
Confidence 346778999999999 79999999999999999999999999999999999999999999999999999999764
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.6e-06 Score=96.93 Aligned_cols=144 Identities=16% Similarity=0.143 Sum_probs=96.5
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
+++||||+|-||..++++|.++|.. |..+.|+... ...+... .+.++.+|++|++++.++++ .+|.|
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~-V~~l~R~~~~---~~~l~~~--~v~~v~~Dl~d~~~l~~al~-------g~d~V 68 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQ-VRCLVRNLRK---ASFLKEW--GAELVYGDLSLPETLPPSFK-------GVTAI 68 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcChHH---hhhHhhc--CCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence 5899999999999999999999875 5555555321 1223323 36788999999988876654 47999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHHH
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 397 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~ 397 (1152)
||+++... . + .....+.++.|+.++.+++. ......||++||..+. ..+...|..+|...+
T Consensus 69 i~~~~~~~-~------~---~~~~~~~~~~~~~~l~~aa~-------~~gvkr~I~~Ss~~~~--~~~~~~~~~~K~~~e 129 (317)
T CHL00194 69 IDASTSRP-S------D---LYNAKQIDWDGKLALIEAAK-------AAKIKRFIFFSILNAE--QYPYIPLMKLKSDIE 129 (317)
T ss_pred EECCCCCC-C------C---ccchhhhhHHHHHHHHHHHH-------HcCCCEEEEecccccc--ccCCChHHHHHHHHH
Confidence 99876432 1 1 11244567889999988843 3356689999986432 123456888888776
Q ss_pred HHHHHHHhcccccCCCceEEEEeCC
Q psy616 398 VYAKYLNNKNIYKKYTNKLITINWP 422 (1152)
Q Consensus 398 ~la~~~~~~g~~~~~~~~~~si~wg 422 (1152)
.+.+ ..+. +++.+..+
T Consensus 130 ~~l~---~~~l------~~tilRp~ 145 (317)
T CHL00194 130 QKLK---KSGI------PYTIFRLA 145 (317)
T ss_pred HHHH---HcCC------CeEEEeec
Confidence 6543 3333 66666554
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.4e-06 Score=104.65 Aligned_cols=160 Identities=16% Similarity=0.117 Sum_probs=103.7
Q ss_pred EEEEECCchhHHHHHHHHHHH--cCCcEEEEecCCcchHHHHHHHHhCC-CcEEEEEecCCCHHH--HHHHHHHHHhhcC
Q psy616 238 TYLITGGTGRLGMLFSDYLIN--KYSTNLILSGRSKLNSIIYKKLKKFN-NKAIYIQVDVSDKLK--MISEINSIINNIG 312 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~--~Ga~~vil~~R~~~~~~~~~~l~~~g-~~v~~~~~Dvsd~~~--v~~~~~~~~~~~G 312 (1152)
++|||||+|-||..+++.|++ +|. .|+++.|+.............+ .++.++.+|++|++. ....++.+ .
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~ 76 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREA-TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G 76 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCC-EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence 589999999999999999994 665 5666666543333322222222 468899999998531 01122222 3
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC--------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------- 384 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-------- 384 (1152)
.+|.|||+||... .. .+ ......+|+.|+.++.+++.. .....||++||....-...
T Consensus 77 ~~D~Vih~Aa~~~-~~----~~---~~~~~~~nv~gt~~ll~~a~~-------~~~~~~v~~SS~~v~g~~~~~~~e~~~ 141 (657)
T PRK07201 77 DIDHVVHLAAIYD-LT----AD---EEAQRAANVDGTRNVVELAER-------LQAATFHHVSSIAVAGDYEGVFREDDF 141 (657)
T ss_pred CCCEEEECceeec-CC----CC---HHHHHHHHhHHHHHHHHHHHh-------cCCCeEEEEeccccccCccCccccccc
Confidence 6899999999754 21 12 234667899999999988532 2345799999976531111
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 385 -----GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 385 -----g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
....|+.+|...+.+.+. ..+ .+++.+..+.+-
T Consensus 142 ~~~~~~~~~Y~~sK~~~E~~~~~--~~g------~~~~ilRp~~v~ 179 (657)
T PRK07201 142 DEGQGLPTPYHRTKFEAEKLVRE--ECG------LPWRVYRPAVVV 179 (657)
T ss_pred hhhcCCCCchHHHHHHHHHHHHH--cCC------CcEEEEcCCeee
Confidence 124599999999888753 223 366667665553
|
|
| >PRK05828 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-06 Score=79.27 Aligned_cols=75 Identities=16% Similarity=0.110 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHH-HhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 503 KFIENDIKNHICN-ILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 503 ~~~~~~l~~~ia~-~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
+.+.+.+++++++ .+.++++.+..+.+|.+||+|||-.++|...|+++||+++|-..+-+..|+.++.+|+.+..
T Consensus 4 ~eI~~~i~~ii~e~~~~~~~d~i~~~~~~~dLg~DSLd~velv~~lE~~f~I~i~~e~~~~i~Tv~d~~~~v~~~~ 79 (84)
T PRK05828 4 MEILLKIKEIAKKKNFAVTLDESNINKPYRELKIDSLDMFSIIVSLESEFNIEFSDEKLMKLKNLADLILEVKELK 79 (84)
T ss_pred HHHHHHHHHHHHHhccCCCcccccCCCCHHhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHH
Confidence 3456678888987 68888889999999999999999999999999999999999999999999999999997754
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.2e-06 Score=95.27 Aligned_cols=102 Identities=11% Similarity=0.113 Sum_probs=77.7
Q ss_pred CEEEEECC-chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGG-TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg-~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+=.||.. +||||+++|+.|+++|+.++++ ++... +.... ...||+++.+++.++++.+.+.+|++|
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv-~~~~~-------l~~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~iD 82 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLV-TTKRA-------LKPEP----HPNLSIREIETTKDLLITLKELVQEHD 82 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEE-cChhh-------ccccc----CCcceeecHHHHHHHHHHHHHHcCCCC
Confidence 45567775 7899999999999999965554 44211 11111 245899999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~ 354 (1152)
++|||||+.. ..++.+.+.++|++++.. +.+.+.+
T Consensus 83 iLVnnAgv~d-~~~~~~~s~e~~~~~~~~---~~~~~~~ 117 (227)
T TIGR02114 83 ILIHSMAVSD-YTPVYMTDLEQVQASDNL---NEFLSKQ 117 (227)
T ss_pred EEEECCEecc-ccchhhCCHHHHhhhcch---hhhhccc
Confidence 9999999876 678899999999988543 4444443
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.4e-06 Score=97.11 Aligned_cols=91 Identities=27% Similarity=0.379 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaCs 796 (1152)
+-|+-+++.++|+++|+++++++ .|++|+...... ...++..++...|| +-|.++|+.+|+
T Consensus 27 ~~L~~~a~~~al~~~~i~~~~Id----~v~~G~~~~~~~-------------g~~~ar~~~l~aGl~~~vp~~~V~~~Ca 89 (264)
T PF00108_consen 27 EDLAAEAVKAALERAGIDPEDID----AVIVGNVLQEGE-------------GQNIARQAALAAGLPESVPATTVNRACA 89 (264)
T ss_dssp HHHHHHHHHHHHHHHTSHGGGEE----EEEEE-SSSCTT-------------TCHHHHHHHHHTTS-TTSEEEEEE-GGG
T ss_pred HHHHHHHHHHHHHhcccchhhhh----hcCccccccccc-------------chhhhhhhhhhcccccccceeeehhhhh
Confidence 35677899999999999988877 789997654211 12245555666677 349999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCc
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMI 826 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~ 826 (1152)
||+.||++|++.|++|+.|++||||++.+.
T Consensus 90 SG~~Av~~a~~~I~sG~~dvvlagGvE~mS 119 (264)
T PF00108_consen 90 SGLQAVHLAAMAIASGEADVVLAGGVESMS 119 (264)
T ss_dssp HHHHHHHHHHHHHHTTS-SEEEEEEEEETT
T ss_pred HHHHHHHHhhhhhcCCCccEEEEecccccc
Confidence 999999999999999999999999999843
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=98.28 E-value=2e-05 Score=87.74 Aligned_cols=186 Identities=11% Similarity=0.034 Sum_probs=142.4
Q ss_pred CCEEEEECC-chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC-
Q psy616 236 GGTYLITGG-TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG- 312 (1152)
Q Consensus 236 ~~~~LITGg-~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G- 312 (1152)
..++||.|. .--|++.+|.-|-++|..++|++... ..++ .++.. ...+..+..|..++.++...+.++.+.+.
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~-ed~~---~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~ 78 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSA-EDEK---YVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSR 78 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCH-HHHH---HHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence 468899996 78999999999999999666655433 2222 23222 34577888888777777776666654332
Q ss_pred -------------CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcc
Q psy616 313 -------------PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA 379 (1152)
Q Consensus 313 -------------~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~ 379 (1152)
.+.+||..-....+.+++++++.++|.+.++.++.-.+...+.++|+|+.....+...|++.-|+.+
T Consensus 79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s 158 (299)
T PF08643_consen 79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS 158 (299)
T ss_pred CCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence 5777877665444578999999999999999999999999999999986533245566777779999
Q ss_pred ccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCc
Q psy616 380 ILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 427 (1152)
Q Consensus 380 ~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 427 (1152)
.+..+-.+.-++..++|.+|++.++++-. ..+++++-|+.|..+=+
T Consensus 159 sl~~PfhspE~~~~~al~~~~~~LrrEl~--~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 159 SLNPPFHSPESIVSSALSSFFTSLRRELR--PHNIDVTQIKLGNLDIG 204 (299)
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHhh--hcCCceEEEEeeeeccc
Confidence 99999999999999999999999988754 45678899998887644
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.1e-05 Score=96.83 Aligned_cols=144 Identities=19% Similarity=0.202 Sum_probs=94.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+..++|||||+|=||..++++|.++|..++++.............+.. ..++.++..|+.+.. +..+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~------------~~~~ 185 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI------------LLEV 185 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc------------ccCC
Confidence 456899999999999999999999988555544322111111111211 235778888987642 1258
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF---------- 384 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~---------- 384 (1152)
|.|||+|+... ... ...+ -...+.+|+.|+.+|.+++... . ..||++||... +|.+
T Consensus 186 D~ViHlAa~~~-~~~-~~~~---p~~~~~~Nv~gT~nLleaa~~~-------g-~r~V~~SS~~V-Yg~~~~~p~~E~~~ 251 (436)
T PLN02166 186 DQIYHLACPAS-PVH-YKYN---PVKTIKTNVMGTLNMLGLAKRV-------G-ARFLLTSTSEV-YGDPLEHPQKETYW 251 (436)
T ss_pred CEEEECceecc-chh-hccC---HHHHHHHHHHHHHHHHHHHHHh-------C-CEEEEECcHHH-hCCCCCCCCCcccc
Confidence 99999998654 111 1122 2467889999999999986421 2 25888888643 2321
Q ss_pred -------CChhhhHHHHHHHHHHHHHHh
Q psy616 385 -------GSCDYAMGNRFQTVYAKYLNN 405 (1152)
Q Consensus 385 -------g~~~Yaaana~l~~la~~~~~ 405 (1152)
....|+.+|...+.+++....
T Consensus 252 ~~~~p~~p~s~Yg~SK~~aE~~~~~y~~ 279 (436)
T PLN02166 252 GNVNPIGERSCYDEGKRTAETLAMDYHR 279 (436)
T ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 134699999999988876543
|
|
| >PRK08172 putative acyl carrier protein IacP; Validated | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.6e-06 Score=78.30 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
+.+.+++.+++.|++++++|.++.+| .++|.|||-.++|...|+++||++++..++.+-.|+.++.+|+.++..
T Consensus 5 i~~~v~~iiae~l~v~~~~i~~d~~l~~dL~~DSld~v~lv~~lEe~F~I~i~~~d~~~i~Tv~di~~~v~~~~~ 79 (82)
T PRK08172 5 IEARVKKVITSCIAVDVDSINGQTHLVEDLYADSLDLIDIVFGLSEEFDISCNENDLPDMTTFADICRVVKKSLE 79 (82)
T ss_pred HHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHHHh
Confidence 56789999999999999999999999 889999999999999999999999999999999999999999987654
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.3e-05 Score=101.82 Aligned_cols=104 Identities=22% Similarity=0.267 Sum_probs=77.9
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
.++||||+|.||.++++.|+++|.. |+.+.|+... .+ ...+.++.+|++|.+++.++++ .+|.|
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~-Vv~l~R~~~~-----~~---~~~v~~v~gDL~D~~~l~~al~-------~vD~V 65 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHE-VVGIARHRPD-----SW---PSSADFIAADIRDATAVESAMT-------GADVV 65 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCE-EEEEECCchh-----hc---ccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence 5899999999999999999999885 4555555321 11 1247789999999998887764 38999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 378 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a 378 (1152)
||+|+... . .+++|+.|+.++.+++. ....+.||++||..
T Consensus 66 VHlAa~~~-~-------------~~~vNv~GT~nLLeAa~-------~~gvkr~V~iSS~~ 105 (854)
T PRK05865 66 AHCAWVRG-R-------------NDHINIDGTANVLKAMA-------ETGTGRIVFTSSGH 105 (854)
T ss_pred EECCCccc-c-------------hHHHHHHHHHHHHHHHH-------HcCCCeEEEECCcH
Confidence 99997543 1 35789999999888742 22456799999963
|
|
| >COG0236 AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=2e-06 Score=77.55 Aligned_cols=73 Identities=25% Similarity=0.389 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 504 FIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 504 ~~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
.+...+++.+++.|+.++.++..+..|. +||+|||-+++|.-.|+++||+++|...+....|++++++|+.+.
T Consensus 5 ~~~~~i~~ii~e~l~~~~~~i~~~~~~~~dlg~DSld~veLi~~lE~~f~i~i~~e~~~~~~tv~~l~~~i~~~ 78 (80)
T COG0236 5 AIEERVKDIIAEQLGVDEEEITTEASFVEDLGLDSLDLVELVMALEEEFGIEIPDEELENIKTVGDLVDYIEEL 78 (80)
T ss_pred HHHHHHHHHHHHHhCCchhhcCcccccccccCccHHHHHHHHHHHHHHHCCcCCHHHHHHHHhHHHHHHHHHHh
Confidence 3567899999999999988899999998 599999999999999999999999999999999999999999764
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.6e-06 Score=86.02 Aligned_cols=83 Identities=19% Similarity=0.170 Sum_probs=64.5
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++||||+ |+|..+++.|+++|+.++++ .|+. ..+.+...+.. +.++.++++|++|++++.++++.+.+.+|++|.
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~-~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~ 78 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVI-ARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL 78 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEE-ECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence 58999998 78888999999999865555 4543 22333333432 457888999999999999999999999999999
Q ss_pred EEEcccc
Q psy616 317 VLHIAGI 323 (1152)
Q Consensus 317 vIh~AG~ 323 (1152)
+|+..-+
T Consensus 79 lv~~vh~ 85 (177)
T PRK08309 79 AVAWIHS 85 (177)
T ss_pred EEEeccc
Confidence 9986643
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.3e-05 Score=90.31 Aligned_cols=221 Identities=11% Similarity=0.099 Sum_probs=139.9
Q ss_pred cCCCEEEEECCc-hhHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHH----HhCCCcEEEEEecCCCHHHHHHHHHHH
Q psy616 234 KQGGTYLITGGT-GRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKL----KKFNNKAIYIQVDVSDKLKMISEINSI 307 (1152)
Q Consensus 234 ~~~~~~LITGg~-gGIG~~lA~~La~~Ga~~vil~~R~~~~-~~~~~~l----~~~g~~v~~~~~Dvsd~~~v~~~~~~~ 307 (1152)
-.+++.||||++ |.||.+++..|...|+.+|+.++|-... .+..+.| ...|....++.++.++..+++.+++.|
T Consensus 394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI 473 (866)
T COG4982 394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI 473 (866)
T ss_pred cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence 357899999976 7899999999999999888888775322 2233333 345778899999999999999999998
Q ss_pred Hhhc----C----------CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhc--CCCCCEE
Q psy616 308 INNI----G----------PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQ--KNKLDFV 371 (1152)
Q Consensus 308 ~~~~----G----------~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~--~~~~~~i 371 (1152)
..+- | .++.+|-.|.... .+.+.+.... -+..+++-+.....|+-.+.+. ...+ ..++..|
T Consensus 474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~-~s~r~v~~R~hVV 550 (866)
T COG4982 474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-SGELADAGSR-AEFAMRILLWNVLRLIGGLKKQ-GSSRGVDTRLHVV 550 (866)
T ss_pred ccccccccCCcceecccccCcceeeecccCCc-cCccccCCch-HHHHHHHHHHHHHHHHHHhhhh-ccccCcccceEEE
Confidence 6431 1 3577777776554 4555554321 1112222233333333332221 0000 1123334
Q ss_pred EEecCCccccCCCCChhhhHHHHHHHHHHHHHHhcc-cccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCC
Q psy616 372 CYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKN-IYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLH 450 (1152)
Q Consensus 372 V~~SS~a~~~g~~g~~~Yaaana~l~~la~~~~~~g-~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~ 450 (1152)
+-.|---|.+|+ -+.|+-+|++||++...+.++. +........--|.|. +++|++..++... ...+..|++..+
T Consensus 551 LPgSPNrG~FGg--DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWt--rGTGLMg~Ndiiv-~aiEk~GV~tyS 625 (866)
T COG4982 551 LPGSPNRGMFGG--DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWT--RGTGLMGHNDIIV-AAIEKAGVRTYS 625 (866)
T ss_pred ecCCCCCCccCC--CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeee--ccccccCCcchhH-HHHHHhCceecC
Confidence 444556677774 4679999999999988777654 433333333457785 6778765544333 345678999999
Q ss_pred HHHHHHHHHHHH
Q psy616 451 ENDGLKLFEQLL 462 (1152)
Q Consensus 451 ~~e~~~~l~~~l 462 (1152)
++|....|.-++
T Consensus 626 ~~EmA~~LLgL~ 637 (866)
T COG4982 626 TDEMAFNLLGLA 637 (866)
T ss_pred HHHHHHHHHhhc
Confidence 999887765544
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.4e-05 Score=91.35 Aligned_cols=167 Identities=16% Similarity=0.136 Sum_probs=115.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~G-a~~vil~~R~~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+..+||||||+|=||+.+++.|.+++ ...+.+............+.. .....+.++++|+.|...+...++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~------- 75 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ------- 75 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence 46789999999999999999999998 566666665543222222221 135679999999999877766553
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG------- 385 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g------- 385 (1152)
.. .|+|+|.... +... .. +-+..+++|+.|+.++.+.+.. ....++|+.||..-.+++.-
T Consensus 76 ~~-~Vvh~aa~~~-~~~~-~~---~~~~~~~vNV~gT~nvi~~c~~-------~~v~~lIYtSs~~Vvf~g~~~~n~~E~ 142 (361)
T KOG1430|consen 76 GA-VVVHCAASPV-PDFV-EN---DRDLAMRVNVNGTLNVIEACKE-------LGVKRLIYTSSAYVVFGGEPIINGDES 142 (361)
T ss_pred Cc-eEEEeccccC-cccc-cc---chhhheeecchhHHHHHHHHHH-------hCCCEEEEecCceEEeCCeecccCCCC
Confidence 34 6777775543 2222 21 4567899999999999998543 36788999999876665421
Q ss_pred -------ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 386 -------SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 386 -------~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
...|+.+|+--+.+....+.. ....+.++-.+..-+
T Consensus 143 ~p~p~~~~d~Y~~sKa~aE~~Vl~an~~-----~~l~T~aLR~~~IYG 185 (361)
T KOG1430|consen 143 LPYPLKHIDPYGESKALAEKLVLEANGS-----DDLYTCALRPPGIYG 185 (361)
T ss_pred CCCccccccccchHHHHHHHHHHHhcCC-----CCeeEEEEccccccC
Confidence 247999999888888765531 123566676655544
|
|
| >PRK07639 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=4.9e-06 Score=75.89 Aligned_cols=75 Identities=12% Similarity=0.165 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHhCCCC-cccccCCCccc-cCCchHHHHHHHHHHHHhcCcccCceec--ccCCCHHHHHHHHHHhh
Q psy616 503 KFIENDIKNHICNILNTKK-SEIYKNKNLAD-YGFDSISLAEFSRILSKFYSLDIMPSIF--FSYSTLERLITYFIKNH 577 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~-~~i~~~~~f~e-lGlDSL~aveL~~~l~~~fgv~L~~~~l--f~~~Ti~~La~~L~~~~ 577 (1152)
+.+.+.+++++++.++++. +++.++.+|.+ +|+|||.+++|...|+++||+++|...+ -.-.|+..+++|+.++.
T Consensus 4 ~ei~~~i~~il~e~l~~~~~~~i~~d~~l~edL~lDSld~velv~~lE~~fgi~i~d~~~~~~~~~Tv~~l~~~i~~~~ 82 (86)
T PRK07639 4 EALKNAVLKIMEEKLELKNVTHLEETMRLNEDLYIDSVMMLQLIVYIEMDVKLCVPEDEVDPKAFLTVGSLLDFMEELQ 82 (86)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHccHHHhCCHHHHHHHHHHhh
Confidence 3466789999999999975 78999999965 9999999999999999999999998876 36779999999997753
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.7e-05 Score=86.89 Aligned_cols=161 Identities=14% Similarity=0.157 Sum_probs=112.2
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-----------hCCCcEEEEEecCCCH------HH
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-----------KFNNKAIYIQVDVSDK------LK 299 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~-----------~~g~~v~~~~~Dvsd~------~~ 299 (1152)
+++++|||+|=||.-+.+.|..+--.+|++.-|....+...+.|+ ....+|.++..|++.+ ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999988777777665556766666655444333332 2246899999999843 22
Q ss_pred HHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcc
Q psy616 300 MISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA 379 (1152)
Q Consensus 300 v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~ 379 (1152)
.+.+. ..+|.|||||....... ...+...+|+.|+..+.+.+. .++...+.++||++-
T Consensus 81 ~~~La-------~~vD~I~H~gA~Vn~v~--------pYs~L~~~NVlGT~evlrLa~-------~gk~Kp~~yVSsisv 138 (382)
T COG3320 81 WQELA-------ENVDLIIHNAALVNHVF--------PYSELRGANVLGTAEVLRLAA-------TGKPKPLHYVSSISV 138 (382)
T ss_pred HHHHh-------hhcceEEecchhhcccC--------cHHHhcCcchHhHHHHHHHHh-------cCCCceeEEEeeeee
Confidence 22222 25999999998765222 245577899999999999853 345667999999875
Q ss_pred ccCCC--------------------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 380 ILGDF--------------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 380 ~~g~~--------------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
.-... -.+.|+-+|.+.+-+++.-..+|+ ++..+-.|...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGL------pv~I~Rpg~I~ 198 (382)
T COG3320 139 GETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGL------PVTIFRPGYIT 198 (382)
T ss_pred ccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCC------CeEEEecCeee
Confidence 32211 125699999999999988777776 77777776653
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.3e-05 Score=89.37 Aligned_cols=131 Identities=15% Similarity=0.225 Sum_probs=85.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
..+.+|||||+|-||..+++.|.++|..+++. ..|+.|.+.+...++.. +.
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~------------------------~~~~~~~~~v~~~l~~~-----~~ 58 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYG------------------------SGRLENRASLEADIDAV-----KP 58 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEe------------------------cCccCCHHHHHHHHHhc-----CC
Confidence 34679999999999999999999998754321 13455666555555432 58
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-C-----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-G----------- 382 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~-g----------- 382 (1152)
|.|||+||... .... +...++-...+.+|+.|+.+|.+++.. ....+ +++||...+- +
T Consensus 59 D~ViH~Aa~~~-~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~-------~gv~~-v~~sS~~vy~~~~~~p~~~~~~~ 128 (298)
T PLN02778 59 THVFNAAGVTG-RPNV-DWCESHKVETIRANVVGTLTLADVCRE-------RGLVL-TNYATGCIFEYDDAHPLGSGIGF 128 (298)
T ss_pred CEEEECCcccC-CCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH-------hCCCE-EEEecceEeCCCCCCCcccCCCC
Confidence 99999999764 2111 111223356888999999999998642 12334 4455432110 0
Q ss_pred ------CCCChhhhHHHHHHHHHHHHHH
Q psy616 383 ------DFGSCDYAMGNRFQTVYAKYLN 404 (1152)
Q Consensus 383 ------~~g~~~Yaaana~l~~la~~~~ 404 (1152)
.+....|+.+|.+.+.+++...
T Consensus 129 ~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~ 156 (298)
T PLN02778 129 KEEDTPNFTGSFYSKTKAMVEELLKNYE 156 (298)
T ss_pred CcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence 0112579999999999887543
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.1e-05 Score=89.12 Aligned_cols=127 Identities=21% Similarity=0.205 Sum_probs=88.8
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
.+||||++|=||.++.++|.++|. .++.+.|+ .+|++|.+++.+++.+. +.|.|
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~-~v~~~~r~--------------------~~dl~d~~~~~~~~~~~-----~pd~V 55 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGY-EVIATSRS--------------------DLDLTDPEAVAKLLEAF-----KPDVV 55 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSE-EEEEESTT--------------------CS-TTSHHHHHHHHHHH-------SEE
T ss_pred EEEEECCCCHHHHHHHHHHhhCCC-EEEEeCch--------------------hcCCCCHHHHHHHHHHh-----CCCeE
Confidence 589999999999999999998875 55555665 68999999999998775 58999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-----------C
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-----------S 386 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g-----------~ 386 (1152)
|||||+... +.-+++-+..+.+|+.++.+|.+++.. ....+|++||..-+-|..+ .
T Consensus 56 in~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~--------~~~~li~~STd~VFdG~~~~~y~E~d~~~P~ 122 (286)
T PF04321_consen 56 INCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKE--------RGARLIHISTDYVFDGDKGGPYTEDDPPNPL 122 (286)
T ss_dssp EE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHH--------CT-EEEEEEEGGGS-SSTSSSB-TTS----S
T ss_pred eccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHH--------cCCcEEEeeccEEEcCCcccccccCCCCCCC
Confidence 999987641 112233456888999999999998642 2346999999754444322 3
Q ss_pred hhhhHHHHHHHHHHHHH
Q psy616 387 CDYAMGNRFQTVYAKYL 403 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~ 403 (1152)
..|+-+|...+...+..
T Consensus 123 ~~YG~~K~~~E~~v~~~ 139 (286)
T PF04321_consen 123 NVYGRSKLEGEQAVRAA 139 (286)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 57999999988877653
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.4e-05 Score=85.26 Aligned_cols=126 Identities=18% Similarity=0.179 Sum_probs=96.5
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
+||||++|-+|.++++.|. +...|+.+.|.+ +|++|.+.+.+++.+. +.|.||
T Consensus 3 iLi~G~~GqLG~~L~~~l~--~~~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~-----~PDvVI 55 (281)
T COG1091 3 ILITGANGQLGTELRRALP--GEFEVIATDRAE--------------------LDITDPDAVLEVIRET-----RPDVVI 55 (281)
T ss_pred EEEEcCCChHHHHHHHHhC--CCceEEeccCcc--------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence 8999999999999999998 334555555443 8999999999999876 799999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-----------Ch
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-----------SC 387 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g-----------~~ 387 (1152)
|+|....- +.-+.+-+..+.+|..|+.++.+++.. -...+|.+|+=.-+-|..+ ..
T Consensus 56 n~AAyt~v-----D~aE~~~e~A~~vNa~~~~~lA~aa~~--------~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~n 122 (281)
T COG1091 56 NAAAYTAV-----DKAESEPELAFAVNATGAENLARAAAE--------VGARLVHISTDYVFDGEKGGPYKETDTPNPLN 122 (281)
T ss_pred ECcccccc-----ccccCCHHHHHHhHHHHHHHHHHHHHH--------hCCeEEEeecceEecCCCCCCCCCCCCCCChh
Confidence 99988652 222333467899999999999999643 2345888888654444442 46
Q ss_pred hhhHHHHHHHHHHHHHH
Q psy616 388 DYAMGNRFQTVYAKYLN 404 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~ 404 (1152)
.|+.+|..-+...+...
T Consensus 123 vYG~sKl~GE~~v~~~~ 139 (281)
T COG1091 123 VYGRSKLAGEEAVRAAG 139 (281)
T ss_pred hhhHHHHHHHHHHHHhC
Confidence 79999999988887654
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.7e-05 Score=95.73 Aligned_cols=126 Identities=17% Similarity=0.249 Sum_probs=86.2
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHH-------------Hh-C--------CCcEE
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYS--TNLILSGRSKLNSIIYKKL-------------KK-F--------NNKAI 288 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga--~~vil~~R~~~~~~~~~~l-------------~~-~--------g~~v~ 288 (1152)
+-.+++++||||+|=||..+++.|++.+. .+|.++.|....+...+.+ ++ . ..++.
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 45799999999999999999999998753 4677777753322211111 11 1 24688
Q ss_pred EEEecCCCHH-----HHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHh
Q psy616 289 YIQVDVSDKL-----KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKL 363 (1152)
Q Consensus 289 ~~~~Dvsd~~-----~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~ 363 (1152)
.+..|++++. +..+ .+.+ .+|.|||+|+... . + +..+..+++|+.|+.++.+++..
T Consensus 196 ~v~GDl~d~~LGLs~~~~~---~L~~---~vDiVIH~AA~v~-f----~---~~~~~a~~vNV~GT~nLLelA~~----- 256 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLAD---EIAK---EVDVIINSAANTT-F----D---ERYDVAIDINTRGPCHLMSFAKK----- 256 (605)
T ss_pred EEEeeCCCcccCCCHHHHH---HHHh---cCCEEEECccccc-c----c---cCHHHHHHHHHHHHHHHHHHHHH-----
Confidence 9999999872 3222 2222 4899999998754 1 1 24567888999999999998532
Q ss_pred cCCCCCEEEEecCCc
Q psy616 364 QKNKLDFVCYFSSSS 378 (1152)
Q Consensus 364 ~~~~~~~iV~~SS~a 378 (1152)
...+..||++||..
T Consensus 257 -~~~lk~fV~vSTay 270 (605)
T PLN02503 257 -CKKLKLFLQVSTAY 270 (605)
T ss_pred -cCCCCeEEEccCce
Confidence 22356688888753
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.06 E-value=6.6e-05 Score=90.02 Aligned_cols=272 Identities=16% Similarity=0.159 Sum_probs=156.0
Q ss_pred CCCcCCCCCHH--HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHH
Q psy616 700 FDPLFFEISPL--EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 700 FD~~~f~is~~--ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~r 777 (1152)
+-+.++.++|+ -.....--+-.+-.++.++|+++|+++++++ -+++. +...+ ..-.++.+
T Consensus 168 ~P~~~~~~~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID----~LIv~-cS~~~-------------p~PSlAa~ 229 (521)
T PLN02854 168 LPRGITSRPPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIG----ILIVN-CSLFN-------------PTPSLSAM 229 (521)
T ss_pred cCccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEE-CCCCC-------------CCCCHHHH
Confidence 44444555552 2233334455667788899999999887765 34443 33321 01235778
Q ss_pred HHHHcCCCC--Cccccc-ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCC
Q psy616 778 LAYFMDLKG--PVMAIN-TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN 854 (1152)
Q Consensus 778 is~~~~l~G--Ps~tvd-taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~ 854 (1152)
|...+|+++ .++-+. .|||+++.||+.|.+.|+.|....|||.+++.+. ...+. | ++...
T Consensus 230 I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S-~~~y~-----------g-----~Drs~ 292 (521)
T PLN02854 230 IVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT-LNWYF-----------G-----NDRSM 292 (521)
T ss_pred HHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee-cCCCC-----------C-----Cchhh
Confidence 888899984 567777 7999999999999999999999999999999843 11100 0 11112
Q ss_pred ---CcccccccEEEEEcccchhh-cCCCceEEEEEEEEEecCCCC----------CC-----CC--CCC--HHH------
Q psy616 855 ---GLVPSEAVVAVVLKRLSRAL-SDGDPIHAIIRGSGINYDGKT----------NG-----IT--APN--GIS------ 905 (1152)
Q Consensus 855 ---G~v~gEG~~~vvLk~l~~A~-~dgd~i~avI~g~a~~~dG~~----------~~-----~~--~P~--~~~------ 905 (1152)
-...|.|+|++||.+-+... +..-++..+++- ....||.. .| +. .|. +..
T Consensus 293 lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t-~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~ 371 (521)
T PLN02854 293 LLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRT-HKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNIT 371 (521)
T ss_pred hcceeeeccceeEEEEecccccccccchheeeEEEE-EEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhh
Confidence 34679999999998633110 001112222221 11111110 01 00 011 010
Q ss_pred ---------------HHHHHHHHHHHcCCCC------CCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeecc
Q psy616 906 ---------------QTELIKSVYKKSNLNP------EDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSN 964 (1152)
Q Consensus 906 ---------------q~~~i~~al~~Agi~p------~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsv 964 (1152)
...++++.+.++|+.+ .||+++-.|--|..+ ++++.+.++-...... +.-.+
T Consensus 372 ~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~I-----Id~v~k~LgL~~~~~e--~sr~t 444 (521)
T PLN02854 372 TLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAV-----LDELQKNLQLSDWHME--PSRMT 444 (521)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHHH-----HHHHHHHcCCCccccc--chHHH
Confidence 1356788899999997 699999999776554 4455555543211111 11122
Q ss_pred CCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEE
Q psy616 965 KSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAH 1044 (1152)
Q Consensus 965 KsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah 1044 (1152)
=...|++-+||=...|-.. ++.|.+. +-.+...-+||.|=+-..
T Consensus 445 L~rfGNTSSASI~~~L~~~---~~kGrik---------------------------------~GD~Vl~iaFGsGft~~s 488 (521)
T PLN02854 445 LHRFGNTSSSSLWYELAYT---EAKGRVS---------------------------------AGDRVWQIAFGSGFKCNS 488 (521)
T ss_pred hhhcCChHhhHHHHHHHHH---HHcCCCC---------------------------------CCCEEEEEEEchhhhhhh
Confidence 3356888776633333322 1222211 112356778998888888
Q ss_pred EEEccc
Q psy616 1045 IVLQEY 1050 (1152)
Q Consensus 1045 ~il~~~ 1050 (1152)
++++-.
T Consensus 489 av~~~~ 494 (521)
T PLN02854 489 AVWKAL 494 (521)
T ss_pred eeeEEe
Confidence 888744
|
|
| >PTZ00171 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.2e-05 Score=80.68 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
.+.+.+.+++++++.+++++++|.++.+|. ++|+|||..++|...|+++||+++|..++-+-.|+.++++|+.++
T Consensus 68 ~~~v~~~l~eiiae~l~vd~~~I~~ds~~~~dLg~DSLd~veLv~~LEdeFgI~Ipded~~~i~TV~dlvd~V~~~ 143 (148)
T PTZ00171 68 KEDVLTRVKKVVKNFEKVDASKITPESNFVKDLGADSLDVVELLIAIEQEFNLTIPDHDAEKIKTVQDAIDYIEQN 143 (148)
T ss_pred HHHHHHHHHHHHHHHhCCCHhhCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHHCCCHHHHHHHHHHH
Confidence 345778899999999999999999999985 999999999999999999999999999999999999999999765
|
|
| >KOG1391|consensus | Back alignment and domain information |
|---|
Probab=97.99 E-value=8.8e-05 Score=77.98 Aligned_cols=232 Identities=21% Similarity=0.276 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC------CCCcccccc
Q psy616 720 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL------KGPVMAINT 793 (1152)
Q Consensus 720 rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l------~GPs~tvdt 793 (1152)
.|-..++..||..|++.++.++.--+|-.+.++...-| ++...|| .-|.++|+.
T Consensus 30 dL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIY--------------------l~RHvGL~~GvP~e~pALtiNR 89 (396)
T KOG1391|consen 30 DLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIY--------------------LARHVGLRVGVPKETPALTINR 89 (396)
T ss_pred hHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceE--------------------eeeccccccCCcCccCceeehh
Confidence 44566788899999999988884333333333322111 1111222 238999999
Q ss_pred cchhHHHHHHHHHHHHHcCCCCEEEEeccccCc-CH--------------------------------------------
Q psy616 794 ACSSSLVATHIACQSLRQHECDTAISAGVNLMI-SP-------------------------------------------- 828 (1152)
Q Consensus 794 aCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~-~~-------------------------------------------- 828 (1152)
-|-|+..++-.+|+.|.-|+.+++|+||++-+. .|
T Consensus 90 LCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~TAEnL~~ 169 (396)
T KOG1391|consen 90 LCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAMTAENLAV 169 (396)
T ss_pred hhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhhhHHHhhh
Confidence 999999999999999999999999999998631 11
Q ss_pred -----------------HHHHHHHhcCCCC------------------CCCCccc-------------CCCCCCCcc---
Q psy616 829 -----------------EAYIAMTSAGMLS------------------PDGKCYV-------------FDERANGLV--- 857 (1152)
Q Consensus 829 -----------------~~~~~~~~~g~ls------------------~~g~~~~-------------Fd~~a~G~v--- 857 (1152)
..+..-...|.+. -|.+.|| |. .||.|
T Consensus 170 qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLppvFk--KdG~VtAG 247 (396)
T KOG1391|consen 170 QYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPPVFK--KDGTVTAG 247 (396)
T ss_pred hheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCchhc--cCCeeecc
Confidence 0000011111111 0112221 22 24444
Q ss_pred ----cccccEEEEEcccchhhcCCCceEEEEEEEEEe-cCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 858 ----PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN-YDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 858 ----~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~-~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
..+|+++|++...+.-.+.+-+.+|.|.++.+. .|..-.|+ -| .-+|+.+|+.+|+...|||.||..-.
T Consensus 248 nASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGI-GP-----vPAI~~vLKksGlkl~DiDl~EvNEA 321 (396)
T KOG1391|consen 248 NASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGI-GP-----VPAISGVLKKSGLKLKDIDLVEVNEA 321 (396)
T ss_pred ccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccc-cC-----cHHHHHHHHHcCCcccccceEEechh
Confidence 468999999988776666778889988887643 33332332 23 34789999999999999999998744
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhh
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSI 987 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l 987 (1152)
-.+ ..-|..+.+.-...+ +-+..--=.+||+.+|||.-=-...+.-|
T Consensus 322 FAp-----Q~LAv~r~L~ld~sK---lNVNGGAIALGHPLgaSGsRIt~HlVHEL 368 (396)
T KOG1391|consen 322 FAP-----QYLAVERSLDLDISK---LNVNGGAIALGHPLGASGSRITAHLVHEL 368 (396)
T ss_pred hch-----HHHHHHHhhCCChhh---ccccCceeeccCccccCcchhhHHHHHHH
Confidence 333 223344444322211 11211111369999999954333333333
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.95 E-value=9.5e-06 Score=111.98 Aligned_cols=75 Identities=16% Similarity=0.193 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
..+++.+.+.|+++|+.+.++|+.+++||++|+|||++++|+++|++.||++|+..++|++||+.+|+++|.+..
T Consensus 847 ~~~~~~l~~~~~~vl~~~~~~i~~~~~ff~lGgdSL~a~~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~l~~~~ 921 (1389)
T TIGR03443 847 TETEREIRDLWLELLPNRPATISPDDSFFDLGGHSILATRMIFELRKKLNVELPLGLIFKSPTIKGFAKEVDRLK 921 (1389)
T ss_pred CHHHHHHHHHHHHHhCCCccccCcCcchhhcCccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhhh
Confidence 346778999999999997778999999999999999999999999999999999999999999999999997643
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0004 Score=79.05 Aligned_cols=214 Identities=21% Similarity=0.291 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCccccc--ccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAIN--TACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvd--taCs 796 (1152)
.-+.++++..+|..+++++..+. .|++|++++.+... .++.-|+..||+.--..+.| -||-
T Consensus 52 vTmaveAA~~~l~r~~~D~~~Ig----~v~vgTES~~d~~K-------------~~at~v~~~lg~~~~~~~~d~~~AC~ 114 (377)
T COG3425 52 VTMAVEAARNALKRADIDPSKIG----AVIVGSESGPDAVK-------------PTATIVAEALGLNPSARAADVEFACY 114 (377)
T ss_pred HHHHHHHHHHHHhccCCCHHHCc----eEEEecCCCccccc-------------chHHHHHHHhCCCCceehhhHHHHHH
Confidence 35789999999999988776655 68889877654322 24566778888876666644 5999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
++..||++|...+.+|..+.+||.|.++...- +.. +-=+--|.|++++|+.+
T Consensus 115 agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~-------------~~~--------~~E~t~GAGavA~lIg~------- 166 (377)
T COG3425 115 AGTAALQAAIGWVESGMISYGLVIGADTAQYA-------------PGD--------ALEYTAGAGAVAFLIGK------- 166 (377)
T ss_pred HHHHHHHHHHHHHHcCCccceEEEeehhhccC-------------CCc--------ccCccCCCceEEEEEcc-------
Confidence 99999999999999999999999999973210 000 11133577888888864
Q ss_pred CCceEEEEEEEEEe-cCC----CCCCCCCCC------H----HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy616 877 GDPIHAIIRGSGIN-YDG----KTNGITAPN------G----ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941 (1152)
Q Consensus 877 gd~i~avI~g~a~~-~dG----~~~~~~~P~------~----~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E 941 (1152)
+.++.+++.+.+.- .|- |..+.+.|. - .....+.+..+++.|.+|+|.+|+-.|-.-+++ =
T Consensus 167 n~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~----~ 242 (377)
T COG3425 167 NPPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKF----P 242 (377)
T ss_pred CCCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCch----H
Confidence 24566666554433 221 112222332 2 234455666678899999999999999888773 3
Q ss_pred HHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHHHHHHH
Q psy616 942 INALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQ 985 (1152)
Q Consensus 942 ~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~lik~~l 985 (1152)
.++++...-... + +.-| ....+||.+.++|...+|++.+-
T Consensus 243 ~ka~k~l~~~~e---~-v~~~l~~~~~vGN~YtgS~~L~Las~L~ 283 (377)
T COG3425 243 KKAAKSLGFKEE---Q-VKPGLVYPQRIGNTYTGSLLLGLASLLD 283 (377)
T ss_pred HHHHHHhCccHh---h-cCccchhhhhcCcccchhHHHHHHHHHh
Confidence 444444433211 1 1112 22347999999999999988653
|
|
| >PRK05087 D-alanine--poly(phosphoribitol) ligase subunit 2; Validated | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.5e-05 Score=69.64 Aligned_cols=71 Identities=14% Similarity=0.233 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCccccC-CchHHHHHHHHHHHHhcCcccCceeccc--CCCHHHHHHHHHH
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNLADYG-FDSISLAEFSRILSKFYSLDIMPSIFFS--YSTLERLITYFIK 575 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f~elG-lDSL~aveL~~~l~~~fgv~L~~~~lf~--~~Ti~~La~~L~~ 575 (1152)
+++.+++.+.+.++.+..++..+.+|++.| +|||-+++|...|+++||++++..++-. ..|+..|++|+.+
T Consensus 3 i~~~I~~iL~~~~~~~~~~~~~d~~l~~~g~lDSl~~veli~~lE~~fgi~i~~~e~~~~~f~Tv~~i~~~v~~ 76 (78)
T PRK05087 3 FKEQVLDILEELTGEDIVSENMDEDLFEEGILDSMGTVELLVELENRFDIEVPVSEFDRDDWNTPNKIIAKVEE 76 (78)
T ss_pred HHHHHHHHHHHHhCCChhccCCccchhhccCcchHHHHHHHHHHHHHhCCccChHhcCHHhhcCHHHHHHHHHH
Confidence 456788888888888777788899999998 6999999999999999999999998877 8999999999865
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00038 Score=82.85 Aligned_cols=176 Identities=18% Similarity=0.187 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC----Cccccccc
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG----PVMAINTA 794 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G----Ps~tvdta 794 (1152)
.-+.++++..+|+++|+.+++++ -|++|+..+.+.. ..++..|...|++-| .++-+..|
T Consensus 51 ~tma~~AA~~lL~~a~id~~~Id----~Liv~TeS~~d~s-------------ps~a~~v~~lL~~lG~~~~~~fDi~~A 113 (454)
T TIGR01833 51 NSLCLTVVSKLMERYNIDYNQIG----RLEVGTETIIDKS-------------KSVKTVLMQLFEESGNTDVEGIDTTNA 113 (454)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCCC-------------CchHHHHHHHHHhcCCCCceEEecccc
Confidence 45788999999999999888776 5777876654321 124556666555433 45668889
Q ss_pred chhHHHHHHHHHHHHHcCCC--CEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccch
Q psy616 795 CSSSLVATHIACQSLRQHEC--DTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 872 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~--d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~ 872 (1152)
|+++..||..|+..|++|.. +-|||.|.++.... ++.+.| ..|+|+++++|.+-..
T Consensus 114 C~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~--------------~~~~~~--------t~GaGAvAmLv~~~~~ 171 (454)
T TIGR01833 114 CYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYA--------------KGNARP--------TGGAGAVAMLIGPNAP 171 (454)
T ss_pred chhHHHHHHHHHHHHHcCCcCCCeEEEEEecccccc--------------CCCeee--------ccccceEEEEeccCcc
Confidence 99999999999999999975 99999999982211 111111 3499999999975433
Q ss_pred hhcCCCceEEEEEEEEEecCCC--CCCCCC--C------CHHHHHHHHHHHHH-----------Hc----CCCCCCccEE
Q psy616 873 ALSDGDPIHAIIRGSGINYDGK--TNGITA--P------NGISQTELIKSVYK-----------KS----NLNPEDINYI 927 (1152)
Q Consensus 873 A~~dgd~i~avI~g~a~~~dG~--~~~~~~--P------~~~~q~~~i~~al~-----------~A----gi~p~dI~yv 927 (1152)
+.-+. .+.++.+.+.+. ...... | |.....+++.++|. .+ +..++|++|+
T Consensus 172 -~~~~~----~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~~dfd~~ 246 (454)
T TIGR01833 172 -IVFER----GLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTLNDFDYM 246 (454)
T ss_pred -ceecC----ccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCHhHcCEE
Confidence 11111 123444443331 122211 1 23345666555552 22 5788999999
Q ss_pred EecCCCCCCCC
Q psy616 928 ITHGTGTKLGD 938 (1152)
Q Consensus 928 e~hgtgT~~gD 938 (1152)
--|-.-|+++-
T Consensus 247 ~fH~P~~km~~ 257 (454)
T TIGR01833 247 VFHSPYCKLVQ 257 (454)
T ss_pred eccCCcccHHH
Confidence 99988887553
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.87 E-value=1.8e-05 Score=66.99 Aligned_cols=67 Identities=24% Similarity=0.333 Sum_probs=59.6
Q ss_pred HHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 509 IKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 509 l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
|++.+.++++-+++++++++||.++|+|||-++.|..++++. |.+|+-..|.++|||.+=-+.|..+
T Consensus 3 Lr~~~~~Ll~e~~~~l~dqeNLi~~GLDSiR~M~L~~~wR~~-G~~i~F~~La~~PTl~aW~qLl~~~ 69 (74)
T COG3433 3 LREQIAELLGESVEELDDQENLIDYGLDSIRMMALLERWRKR-GADIDFAQLAANPTLAAWWQLLSTR 69 (74)
T ss_pred HHHHHHHHHcCChhhcCchhhHHHhchhHHHHHHHHHHHHHc-CCcccHHHHHhCccHHHHHHHHHhc
Confidence 567888899988899999999999999999999999999776 7789999999999999977766543
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=1.4e-05 Score=109.76 Aligned_cols=73 Identities=16% Similarity=0.209 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
...+++.+.++|+++|+++ .++.+++||++|+|||++++|..+|++.||++|+..++|++|||++|+++|.+.
T Consensus 976 ~~~~e~~l~~~~~~~l~~~--~~~~~~~ff~lGg~Sl~a~~l~~~l~~~~~~~l~~~~~~~~pti~~la~~l~~~ 1048 (1296)
T PRK10252 976 KTGTETIIAAAFSSLLGCD--VVDADADFFALGGHSLLAMKLAAQLSRQFARQVTPGQVMVASTVAKLATLLDAE 1048 (1296)
T ss_pred CCHHHHHHHHHHHHHhCCC--CCCCCcCHHHcCCChHHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHhcc
Confidence 3457788999999999986 688899999999999999999999999999999999999999999999999653
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00017 Score=99.76 Aligned_cols=167 Identities=14% Similarity=0.157 Sum_probs=109.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcC---CcEEEEecCCcchHHHHHHHH----hCC-------CcEEEEEecCCCHHH-
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKY---STNLILSGRSKLNSIIYKKLK----KFN-------NKAIYIQVDVSDKLK- 299 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~G---a~~vil~~R~~~~~~~~~~l~----~~g-------~~v~~~~~Dvsd~~~- 299 (1152)
..++++|||++|-||..+++.|++++ ..+|+.+.|........+.+. ..+ .++.++.+|++++.-
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 45789999999999999999999887 356777777644333222222 111 368899999985420
Q ss_pred -HHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc
Q psy616 300 -MISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 378 (1152)
Q Consensus 300 -v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a 378 (1152)
-....+++. ..+|.|||||+... . ... +.....+|+.|+.++.+.+. ..+...|+++||++
T Consensus 1050 l~~~~~~~l~---~~~d~iiH~Aa~~~-~----~~~---~~~~~~~nv~gt~~ll~~a~-------~~~~~~~v~vSS~~ 1111 (1389)
T TIGR03443 1050 LSDEKWSDLT---NEVDVIIHNGALVH-W----VYP---YSKLRDANVIGTINVLNLCA-------EGKAKQFSFVSSTS 1111 (1389)
T ss_pred cCHHHHHHHH---hcCCEEEECCcEec-C----ccC---HHHHHHhHHHHHHHHHHHHH-------hCCCceEEEEeCee
Confidence 011122222 36899999998754 1 122 23345679999999998853 22345799999975
Q ss_pred cccC--------------CC--------------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 379 AILG--------------DF--------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 379 ~~~g--------------~~--------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
.+-+ .. ....|+.+|...+.+++.....|+ +++.+..+...
T Consensus 1112 v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~------~~~i~Rpg~v~ 1180 (1389)
T TIGR03443 1112 ALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGL------RGCIVRPGYVT 1180 (1389)
T ss_pred ecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCC------CEEEECCCccc
Confidence 4311 00 123599999999998877655444 77777776554
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00021 Score=80.83 Aligned_cols=98 Identities=23% Similarity=0.156 Sum_probs=62.9
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
+|||||+|-||..+++.|+++|. .|+.+.|+...... +... . ..|+.. . .....+..+|.||
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~~----~--~~~~~~-~-------~~~~~~~~~D~Vv 62 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH-EVTILTRSPPAGAN---TKWE----G--YKPWAP-L-------AESEALEGADAVI 62 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC-EEEEEeCCCCCCCc---ccce----e--eecccc-c-------chhhhcCCCCEEE
Confidence 58999999999999999999987 45555565432111 1000 0 112222 1 1123345799999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHH
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALE 357 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~ 357 (1152)
|+||... . ....+.+.....++.|+.++.++.+++.
T Consensus 63 h~a~~~~-~--~~~~~~~~~~~~~~~n~~~~~~l~~a~~ 98 (292)
T TIGR01777 63 NLAGEPI-A--DKRWTEERKQEIRDSRIDTTRALVEAIA 98 (292)
T ss_pred ECCCCCc-c--cccCCHHHHHHHHhcccHHHHHHHHHHH
Confidence 9998643 1 1223445566788999999999999853
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00047 Score=78.06 Aligned_cols=75 Identities=23% Similarity=0.265 Sum_probs=56.0
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC-eeEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP-IDGV 317 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~-idgv 317 (1152)
++||||+|.||..++++|.++|.. |.++.|++... ... .+..+.+|+.|++++..+++.. +.+.. +|.|
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~-V~~~~R~~~~~------~~~--~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v 71 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVP-FLVASRSSSSS------AGP--NEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAV 71 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCc-EEEEeCCCccc------cCC--CCccccccCCCHHHHHHHHhcc-cCcCCceeEE
Confidence 799999999999999999999875 55555654321 112 3455678999999999888653 33444 9999
Q ss_pred EEcccc
Q psy616 318 LHIAGI 323 (1152)
Q Consensus 318 Ih~AG~ 323 (1152)
+|+++.
T Consensus 72 ~~~~~~ 77 (285)
T TIGR03649 72 YLVAPP 77 (285)
T ss_pred EEeCCC
Confidence 998864
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG1392|consensus | Back alignment and domain information |
|---|
Probab=97.76 E-value=1.9e-05 Score=83.95 Aligned_cols=149 Identities=22% Similarity=0.287 Sum_probs=98.4
Q ss_pred cccccEEEEEcccchhhcCCCceEEEEEEE-EEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy616 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGS-GINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 936 (1152)
Q Consensus 858 ~gEG~~~vvLk~l~~A~~dgd~i~avI~g~-a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~ 936 (1152)
+.+|+.+.++...+.|++.|-...|.+|.. -+++|....-+..| +-+|-+.|++||++..|||.+|.|-.-..
T Consensus 302 ltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgp-----ay~ipkll~kagltlkdid~feiheafag- 375 (465)
T KOG1392|consen 302 LTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGP-----AYVIPKLLDKAGLTLKDIDVFEIHEAFAG- 375 (465)
T ss_pred hcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheeccc-----ccccHHHHHHcCCcccccchhhhHHHHhH-
Confidence 467888888899999999998888888876 46777766555555 34678899999999999999999954221
Q ss_pred CCH-HHHHHHH-HHhccc----CCCCCc-------eeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCc
Q psy616 937 GDP-VEINALH-DVFKNK----TYNQKF-------CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENN 1003 (1152)
Q Consensus 937 gD~-~E~~al~-~~f~~~----~~~~~~-------~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np 1003 (1152)
.- ..++|+. +.|+.. ..+-.. .|=||. .|||+.+|.|+-=...++--|+.
T Consensus 376 -qilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggsl--sighpfgatgvrl~mh~anrl~~-------------- 438 (465)
T KOG1392|consen 376 -QILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSL--SIGHPFGATGVRLAMHSANRLKE-------------- 438 (465)
T ss_pred -HHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcce--ecCCcccccchhhHHHHHhHHHh--------------
Confidence 10 1233442 223321 111111 122433 38999999986433222222221
Q ss_pred ccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1004 YIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1004 ~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
++-+++.|-....||....+++|.|+
T Consensus 439 ----------------------e~gqygvvaacaaggqgvamlieayp 464 (465)
T KOG1392|consen 439 ----------------------EKGQYGVVAACAAGGQGVAMLIEAYP 464 (465)
T ss_pred ----------------------hcCceeEeehhhcCCcceEEEeeccC
Confidence 22367788888899999999999886
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=97.76 E-value=2.5e-05 Score=117.84 Aligned_cols=73 Identities=16% Similarity=0.234 Sum_probs=67.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHH
Q psy616 501 IEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 575 (1152)
Q Consensus 501 ~~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~ 575 (1152)
+...++..|.++|+++|+++ +|+.+++||++|+|||+|++|..++++.||++|++.++|++|||.+||++|..
T Consensus 4238 p~~~~e~~l~~iw~~vL~~~--~i~~~d~Ff~lGg~Sl~a~~l~~~~~~~~~~~~~~~~~f~~~t~~~la~~~~~ 4310 (4334)
T PRK05691 4238 PRNELEQTLATIWADVLKVE--RVGVHDNFFELGGHSLLATQIASRVQKALQRNVPLRAMFECSTVEELAEYIEG 4310 (4334)
T ss_pred CCCHHHHHHHHHHHHHhCCC--cCCCCCchhhcCCcHHHHHHHHHHHHHHhCCCccHHHHhcCCCHHHHHHHHhh
Confidence 34568889999999999985 68999999999999999999999999999999999999999999999999964
|
|
| >PRK06508 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=4.6e-05 Score=70.25 Aligned_cols=73 Identities=14% Similarity=0.221 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecc-----------cCCCHHHHHHH
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFF-----------SYSTLERLITY 572 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf-----------~~~Ti~~La~~ 572 (1152)
+.+.+++++++.++++++.|.++.+| .+||+|||..++|.-.|+++||++++..++- .+.|+++|+.+
T Consensus 4 i~ekv~~Ilae~~~vd~~~It~ds~~~edL~~DSLd~veli~~lE~eFgI~i~~ee~~~~~n~~~~~~~~~~~l~~~~~~ 83 (93)
T PRK06508 4 TFDKVADIIAETSDIPRDTITPESHTIDDLGIDSLDFLDIVFAIDKAFGIKLPLEQWTQEVNEGKVPTEEYFVLKNLCAK 83 (93)
T ss_pred HHHHHHHHHHHHhCCCHHHCCCCCcchhccCCCHHHHHHHHHHHHHHHCCccCHHHHHHhhcccccccchHHHHHHHHHH
Confidence 45679999999999999999999976 8999999999999999999999999987764 45577788877
Q ss_pred HHHhh
Q psy616 573 FIKNH 577 (1152)
Q Consensus 573 L~~~~ 577 (1152)
+.+..
T Consensus 84 i~~~~ 88 (93)
T PRK06508 84 IDELV 88 (93)
T ss_pred HHHHH
Confidence 76543
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00034 Score=89.04 Aligned_cols=130 Identities=18% Similarity=0.258 Sum_probs=89.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+...+|||||+|=||.++++.|.++|.... +...|++|.+.+...+... .+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~------------------------~~~~~l~d~~~v~~~i~~~-----~p 429 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYE------------------------YGKGRLEDRSSLLADIRNV-----KP 429 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEE------------------------eeccccccHHHHHHHHHhh-----CC
Confidence 345699999999999999999998876421 2234688888887776653 58
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC------------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------ 382 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g------------ 382 (1152)
|.|||+|+... ... .+...++-...+++|+.|+.+|.+++.. .... +|++||...+-+
T Consensus 430 d~Vih~Aa~~~-~~~-~~~~~~~~~~~~~~N~~gt~~l~~a~~~-------~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~ 499 (668)
T PLN02260 430 THVFNAAGVTG-RPN-VDWCESHKVETIRANVVGTLTLADVCRE-------NGLL-MMNFATGCIFEYDAKHPEGSGIGF 499 (668)
T ss_pred CEEEECCcccC-CCC-CChHHhCHHHHHHHHhHHHHHHHHHHHH-------cCCe-EEEEcccceecCCcccccccCCCC
Confidence 99999999754 211 1223344567888999999999999643 2233 556665331110
Q ss_pred ------CCCChhhhHHHHHHHHHHHHH
Q psy616 383 ------DFGSCDYAMGNRFQTVYAKYL 403 (1152)
Q Consensus 383 ------~~g~~~Yaaana~l~~la~~~ 403 (1152)
.+-...|+.+|.+.+.+++..
T Consensus 500 ~E~~~~~~~~~~Yg~sK~~~E~~~~~~ 526 (668)
T PLN02260 500 KEEDKPNFTGSFYSKTKAMVEELLREY 526 (668)
T ss_pred CcCCCCCCCCChhhHHHHHHHHHHHhh
Confidence 011257999999999988654
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00057 Score=82.14 Aligned_cols=119 Identities=18% Similarity=0.224 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Cccccc-
Q psy616 716 DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAIN- 792 (1152)
Q Consensus 716 dpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvd- 792 (1152)
.--..++.+++.+||+++|+++++++ -+++ ++.+.+ ..-.++.+|...||++. +++-+.
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID----~LVv-~cS~~~-------------~~PSlaa~V~~~LGlr~~v~afdL~g 231 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIG----ILVV-NCSLFN-------------PTPSLSAMIVNKYKLRGNIRSFNLGG 231 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC----EEEE-ECCCCC-------------CCCcHHHHHHHHhCCCCCCeEEeccc
Confidence 33557888999999999999988775 3333 333321 01235778888899986 788888
Q ss_pred ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCC----CcccccccEEEEEc
Q psy616 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN----GLVPSEAVVAVVLK 868 (1152)
Q Consensus 793 taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~----G~v~gEG~~~vvLk 868 (1152)
.+||+++.||+.|.+.|+.|....|||.+++.+. ...+ ++++.. ....|.|+|+++|.
T Consensus 232 mGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S-~~~~-----------------~~d~~s~lv~n~LFgDGAaAvlLs 293 (502)
T PLN02377 232 MGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENIT-QNWY-----------------FGNKKSMLIPNCLFRVGGSAVLLS 293 (502)
T ss_pred chhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-cccC-----------------CCCCccccccceeeccccEEEEEe
Confidence 5999999999999999999999999999999732 2111 111112 25569999999998
Q ss_pred cc
Q psy616 869 RL 870 (1152)
Q Consensus 869 ~l 870 (1152)
..
T Consensus 294 ~~ 295 (502)
T PLN02377 294 NK 295 (502)
T ss_pred cc
Confidence 63
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=3.3e-05 Score=115.55 Aligned_cols=73 Identities=15% Similarity=0.163 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHH
Q psy616 501 IEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 575 (1152)
Q Consensus 501 ~~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~ 575 (1152)
+...+++.+.++|+++|+++ .|+.+++||++|+|||++++|..+|++.||++|+..++|++|||++|++++..
T Consensus 3602 p~~~~e~~l~~i~~~vL~~~--~i~~~d~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~~ 3674 (3956)
T PRK12467 3602 PRSEVEQQLAAIWADVLGVE--QVGVTDNFFELGGDSLLALQVLSRIRQSLGLKLSLRDLMSAPTIAELAGYSPL 3674 (3956)
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCcchhcccchHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHhh
Confidence 34567889999999999985 58999999999999999999999999999999999999999999999999853
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00011 Score=86.38 Aligned_cols=77 Identities=18% Similarity=0.289 Sum_probs=58.3
Q ss_pred CCCEEEEECC----------------chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy616 235 QGGTYLITGG----------------TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 298 (1152)
Q Consensus 235 ~~~~~LITGg----------------~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~ 298 (1152)
.++++||||| +|++|.++|+.|+++|+.++++.+... .+ . ..+ +..+|+++.+
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~-~~~----~~~~dv~~~~ 255 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T-PAG----VKRIDVESAQ 255 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C-CCC----cEEEccCCHH
Confidence 5789999999 666999999999999996555544322 11 0 011 3568999999
Q ss_pred HHHHHHHHHHhhcCCeeEEEEcccccC
Q psy616 299 KMISEINSIINNIGPIDGVLHIAGISG 325 (1152)
Q Consensus 299 ~v~~~~~~~~~~~G~idgvIh~AG~~~ 325 (1152)
++.+.+. +.++++|++|||||+..
T Consensus 256 ~~~~~v~---~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 256 EMLDAVL---AALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHHHHH---HhcCCCCEEEEcccccc
Confidence 9887776 45789999999999875
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=97.66 E-value=8.1e-05 Score=112.51 Aligned_cols=73 Identities=10% Similarity=0.088 Sum_probs=67.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
...+++.|.++|+++|+++ +|+.+++||++|+|||.+++|..++++.||++|+..++|++|||.+|++++.+.
T Consensus 1636 ~~~~e~~l~~iw~~vL~~~--~i~~~d~Ff~lGGdSl~a~~l~~~~~~~~~~~l~~~~~f~~~tl~~la~~i~~~ 1708 (4334)
T PRK05691 1636 RTELQQQIAAIWREVLGLP--RVGLRDDFFALGGHSLLATQIVSRTRQACDVELPLRALFEASELGAFAEQVARI 1708 (4334)
T ss_pred CCHHHHHHHHHHHHHhCCC--CCCCCCchHHhcccHHHHHHHHHHHHHHhCCCcchhhhhcCCcHHHHHHHhhhh
Confidence 3457788999999999986 688899999999999999999999999999999999999999999999998653
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00063 Score=81.32 Aligned_cols=126 Identities=14% Similarity=0.181 Sum_probs=90.8
Q ss_pred hcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Cccc
Q psy616 713 ERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMA 790 (1152)
Q Consensus 713 ~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~t 790 (1152)
...+-...++.+++.+||+++|+++++++ -+++.++.+. ..-.++.+|...+|++. +++-
T Consensus 143 ~~~~ea~~la~~Aa~~aL~~agi~p~dId----~lIv~tst~~--------------~~Pslaa~V~~~lGlr~~i~~fd 204 (478)
T PLN02932 143 VSRKETEEVIIGAVDNLFRNTGISPSDIG----ILVVNSSTFN--------------PTPSLSSILVNKFKLRDNIKSLN 204 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCC--------------CCCcHHHHHHHHhCCCCCceEEE
Confidence 33445667889999999999999987775 4555554431 11235778888999974 6888
Q ss_pred cc-ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcc
Q psy616 791 IN-TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKR 869 (1152)
Q Consensus 791 vd-taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~ 869 (1152)
+. .|||+++.||..|.+.|+.|....|||.+++.+ ++..+.. +. +. ..-.-..+|.|+++++|..
T Consensus 205 L~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~-S~~~~~~---------d~--r~--~l~t~~LFgDGAAAvlLs~ 270 (478)
T PLN02932 205 LGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENI-TQNLYLG---------NN--KS--MLVTNCLFRIGGAAILLSN 270 (478)
T ss_pred eccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeec-ccccCCC---------cc--hh--hhccceeecccceEEEEec
Confidence 88 799999999999999999999999999999983 3222110 00 00 0012456799999999986
Q ss_pred c
Q psy616 870 L 870 (1152)
Q Consensus 870 l 870 (1152)
.
T Consensus 271 ~ 271 (478)
T PLN02932 271 R 271 (478)
T ss_pred c
Confidence 4
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00056 Score=74.22 Aligned_cols=199 Identities=17% Similarity=0.112 Sum_probs=119.9
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
++||||+|=||++++..|.+.|..+.+++++....+.. ....+. ..+. +++.... ++|.||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~------~~~~v~-------~~~~----~~~~~~~--~~DavI 61 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN------LHPNVT-------LWEG----LADALTL--GIDAVI 61 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh------cCcccc-------ccch----hhhcccC--CCCEEE
Confidence 58999999999999999999988666666655432211 111111 1111 1222221 799999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh----HHHH
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA----MGNR 394 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya----aana 394 (1152)
|.||..-..+ .-+.+.=+..++.-+..+..|.+.+.. .+.+...+| -+|..|+.|..+...|. ..+.
T Consensus 62 NLAG~~I~~r---rWt~~~K~~i~~SRi~~T~~L~e~I~~-----~~~~P~~~i-saSAvGyYG~~~~~~~tE~~~~g~~ 132 (297)
T COG1090 62 NLAGEPIAER---RWTEKQKEEIRQSRINTTEKLVELIAA-----SETKPKVLI-SASAVGYYGHSGDRVVTEESPPGDD 132 (297)
T ss_pred ECCCCccccc---cCCHHHHHHHHHHHhHHHHHHHHHHHh-----ccCCCcEEE-ecceEEEecCCCceeeecCCCCCCC
Confidence 9999644122 146666677888888888888777532 223334444 37778888887766553 4577
Q ss_pred HHHHHHHHHHhcccc-cCCCceEEEEeCCccc--CccccccccccchhHH------hhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIY-KKYTNKLITINWPLWN--NSKFKIGNNEQTDFYF------KSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~-~~~~~~~~si~wg~w~--~~Gm~~~~~~~~~~~~------~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|+..+|+.+...... ...+++++-+--|..- ++|+...........+ .++-+..|..++.++++..++.+.
T Consensus 133 Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~ 212 (297)
T COG1090 133 FLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE 212 (297)
T ss_pred hHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc
Confidence 888888877655442 2346677777666543 2444322111111000 012234578899999998888753
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00065 Score=80.97 Aligned_cols=172 Identities=15% Similarity=0.125 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHH---HHcCCCC-Cccccccc
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLA---YFMDLKG-PVMAINTA 794 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris---~~~~l~G-Ps~tvdta 794 (1152)
.-+.++++..||+++|+++++++ -|++|++.+.+.. ...|..|. ..+|.+. +++=+..|
T Consensus 54 ~tmA~~AA~~aL~~agid~~~Id----llivaTeT~~d~~-------------ps~A~~v~~ll~~LG~~~~~afDi~~A 116 (459)
T PLN02577 54 ISMSLTVVKSLLEKYNIDPKQIG----RLEVGSETVIDKS-------------KSIKTFLMQLFEESGNTDIEGVDSTNA 116 (459)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCCC-------------CchHHHHHHHHHHhCCCCcEEeehhhh
Confidence 46789999999999999988876 6778877654321 11344443 3345443 56778899
Q ss_pred chhHHHHHHHHHHHHHcCCC--CEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccch
Q psy616 795 CSSSLVATHIACQSLRQHEC--DTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 872 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~--d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~ 872 (1152)
|++++.||+.|...|++|.. +-|||.|.++... ..+ +. ++ .-|.|++++++.+-.
T Consensus 117 C~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~--------~~~---~~---e~--------t~GdGA~A~lv~~~~- 173 (459)
T PLN02577 117 CYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVY--------AEG---PA---RP--------TGGAGAVAMLVGPNA- 173 (459)
T ss_pred hHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhc--------cCC---CC---CC--------CCCcceEEEEEccCC-
Confidence 99999999999999999985 9999999997211 011 11 11 128999999997421
Q ss_pred hhcCCCceEEEEEEEEEecCC-CCCCCCCCC-------------HHHHHHHH----HHHHHHc------CCCCCCccEEE
Q psy616 873 ALSDGDPIHAIIRGSGINYDG-KTNGITAPN-------------GISQTELI----KSVYKKS------NLNPEDINYII 928 (1152)
Q Consensus 873 A~~dgd~i~avI~g~a~~~dG-~~~~~~~P~-------------~~~q~~~i----~~al~~A------gi~p~dI~yve 928 (1152)
+ .+|.......++ ....+..|+ .....+.+ ++.+++. |+.++|++|+-
T Consensus 174 ------~--~~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d~d~~v 245 (459)
T PLN02577 174 ------P--IVFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISDADYFV 245 (459)
T ss_pred ------C--ceeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHcCEEE
Confidence 1 122211110111 011111111 11223333 4444444 88999999999
Q ss_pred ecCCCCCCCC
Q psy616 929 THGTGTKLGD 938 (1152)
Q Consensus 929 ~hgtgT~~gD 938 (1152)
.|-.-|+++-
T Consensus 246 fHqP~~km~~ 255 (459)
T PLN02577 246 FHAPYNKLVQ 255 (459)
T ss_pred ecCCccchhH
Confidence 9988887553
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=6.7e-05 Score=112.36 Aligned_cols=73 Identities=11% Similarity=0.156 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
...+++.|.++|+++|+++ .|+.+++||++|+|||++++|..++++.||++|++.++|++|||.+|+++|.+.
T Consensus 1028 ~~~~e~~l~~i~~~vL~~~--~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~lf~~~t~~~la~~~~~~ 1100 (3956)
T PRK12467 1028 QTELEKRLAAIWADVLKVE--RVGLTDNFFELGGHSLLATQVISRVRQRLGIQVPLRTLFEHQTLAGFAQAVAAQ 1100 (3956)
T ss_pred CCHHHHHHHHHHHHHhCCC--CCCCCCCchhccCccHHHHHHHHHHHHHhCCCcchHHhhccchHHHHHHHhhhh
Confidence 3457788999999999985 689999999999999999999999999999999999999999999999999764
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=97.57 E-value=6.3e-05 Score=73.19 Aligned_cols=121 Identities=17% Similarity=0.214 Sum_probs=76.9
Q ss_pred ceEEEEEEEEEec-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCC
Q psy616 879 PIHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQK 957 (1152)
Q Consensus 879 ~i~avI~g~a~~~-dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~ 957 (1152)
++.|.|.+++... |... ..+ +-..+++++|+++|++++|||++|.|-..+. .++..++. ++-.. .+
T Consensus 2 ~pla~i~~~~~~~~~P~~-~~~-----~p~~A~~~al~~ag~~~~did~~Ei~EaFA~----~~l~~~~~-lg~~~--~~ 68 (123)
T PF02803_consen 2 KPLARIVGYASAGVDPED-MGL-----GPVPAARKALERAGLTPDDIDVIEINEAFAA----QVLAFLEA-LGLDP--EK 68 (123)
T ss_dssp -ESEEEEEEEEEE--GGG-GGG-----THHHHHHHHHHHHT--GGGESEEEE--SBHH----HHHHHHHH-HTTGG--GG
T ss_pred CeEEEEEEEEEEecCHHH-hCc-----hHHHHHHHHHHHhCCCccccchhhccchhhh----HHHHhhcc-ccccc--cc
Confidence 3678888887653 2221 112 2357899999999999999999999977654 34433333 33221 11
Q ss_pred ceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcC
Q psy616 958 FCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFG 1037 (1152)
Q Consensus 958 ~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG 1037 (1152)
.-+-|+.++ +||+.+|+|+..++.++.+|+.+ ..+++.++.-+
T Consensus 69 vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~------------------------------------~~~~gla~~~~ 111 (123)
T PF02803_consen 69 VNPNGGALA-LGHPLGASGARLVVELAHQLRRR------------------------------------GGRYGLAAICA 111 (123)
T ss_dssp BSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHH------------------------------------TTSEEEEEEEE
T ss_pred cCccccccc-ccccccccccchhhhhHHHHHHh------------------------------------chhhhhHHhcc
Confidence 223466666 49999999999999999999872 12456666677
Q ss_pred CCcceEEEEEcc
Q psy616 1038 MSGTNAHIVLQE 1049 (1152)
Q Consensus 1038 ~gG~nah~il~~ 1049 (1152)
-||....+|||+
T Consensus 112 ggG~g~a~ller 123 (123)
T PF02803_consen 112 GGGQGSAVLLER 123 (123)
T ss_dssp TTTEEEEEEEEE
T ss_pred cceeeEEEEEEC
Confidence 788999999874
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00022 Score=80.89 Aligned_cols=81 Identities=15% Similarity=0.126 Sum_probs=62.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~----~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
++++++|+|+ ||+|++++..|++.|+++|.++.|+. ..+++.+++...+..+.+..+|+++.+++.+.++
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~----- 198 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA----- 198 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc-----
Confidence 4689999998 79999999999999998888888874 3455555665555556667889988777655443
Q ss_pred cCCeeEEEEcccc
Q psy616 311 IGPIDGVLHIAGI 323 (1152)
Q Consensus 311 ~G~idgvIh~AG~ 323 (1152)
..|+||||.-+
T Consensus 199 --~~DilINaTp~ 209 (289)
T PRK12548 199 --SSDILVNATLV 209 (289)
T ss_pred --cCCEEEEeCCC
Confidence 35999998754
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00041 Score=86.57 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=71.6
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
.+|||||+|-||..+++.|.++|.. |+++.|.... . ....+.++.+|++|.. +.+++ ..+|.|
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~-Vi~ldr~~~~------~--~~~~ve~v~~Dl~d~~-l~~al-------~~~D~V 64 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHT-VSGIAQHPHD------A--LDPRVDYVCASLRNPV-LQELA-------GEADAV 64 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCE-EEEEeCChhh------c--ccCCceEEEccCCCHH-HHHHh-------cCCCEE
Confidence 5899999999999999999999874 4445554321 1 1235778999999973 33322 258999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 378 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a 378 (1152)
||+|+... .. ...+|+.|+.++.+++.. ... .||++||..
T Consensus 65 IHLAa~~~-~~------------~~~vNv~Gt~nLleAA~~-------~Gv-RiV~~SS~~ 104 (699)
T PRK12320 65 IHLAPVDT-SA------------PGGVGITGLAHVANAAAR-------AGA-RLLFVSQAA 104 (699)
T ss_pred EEcCccCc-cc------------hhhHHHHHHHHHHHHHHH-------cCC-eEEEEECCC
Confidence 99998643 11 114789999999988532 222 588888763
|
|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=8.6e-05 Score=113.38 Aligned_cols=72 Identities=13% Similarity=0.169 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHH
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 575 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~ 575 (1152)
...++..+.++|+++|+++ +|+.+++||++|+|||.+++|.++|++.||++|++.++|++|||++|+++|..
T Consensus 5070 ~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~~ 5141 (5163)
T PRK12316 5070 RSELEQQVAAIWAEVLQLE--RVGLDDNFFELGGHSLLAIQVTSRIQLELGLELPLRELFQTPTLAAFVELAAA 5141 (5163)
T ss_pred CcHHHHHHHHHHHHHhCCC--CCCCCCChhhccchHHHHHHHHHHHHHHcCCCCCHHHHHcCCCHHHHHHHHHh
Confidence 3457888999999999985 68899999999999999999999999999999999999999999999999954
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00084 Score=80.55 Aligned_cols=118 Identities=17% Similarity=0.186 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Cccccc-c
Q psy616 717 PRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAIN-T 793 (1152)
Q Consensus 717 pq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvd-t 793 (1152)
--..++-.++.+||+++|+++++++ -+++.+ ...+ ..-.++.+|...+|++. +++-+. .
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p~DID----iLIv~~-S~~~-------------~~PSlaa~I~n~lGlr~~i~afdLsgm 236 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKPKDIG----ILIVNC-SLFN-------------PTPSLSAMVINHYKLRGNILSYNLGGM 236 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEC-CCCC-------------CCchHHHHHHHHhCCCCCceEEEcccc
Confidence 3557788999999999999887765 333432 2211 11235778888889985 788898 6
Q ss_pred cchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCC----cccccccEEEEEcc
Q psy616 794 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANG----LVPSEAVVAVVLKR 869 (1152)
Q Consensus 794 aCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G----~v~gEG~~~vvLk~ 869 (1152)
+||+++.||+.|.+.|+.+....|||.+++.+. ...+. ..+++- ..+|.|+|++||..
T Consensus 237 GCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S-~n~y~-----------------g~drs~lv~n~LFgDGAaAvLLs~ 298 (511)
T PLN02192 237 GCSAGLISIDLAKHLLQVHPNSYALVISMENIT-LNWYF-----------------GNDRSMLVSNCLFRMGGAAILLSN 298 (511)
T ss_pred hhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc-ccCCC-----------------CCCHHHHhccccccccceEEEEec
Confidence 999999999999999999999999999999743 11100 011111 24699999999986
Q ss_pred c
Q psy616 870 L 870 (1152)
Q Consensus 870 l 870 (1152)
.
T Consensus 299 ~ 299 (511)
T PLN02192 299 K 299 (511)
T ss_pred c
Confidence 3
|
|
| >TIGR01688 dltC D-alanine--poly(phosphoribitol) ligase, subunit 2 | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00027 Score=61.76 Aligned_cols=68 Identities=13% Similarity=0.252 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhCCCCcccccCCCccccCC-chHHHHHHHHHHHHhcCcccCceecc--cCCCHHHHHHHHH
Q psy616 507 NDIKNHICNILNTKKSEIYKNKNLADYGF-DSISLAEFSRILSKFYSLDIMPSIFF--SYSTLERLITYFI 574 (1152)
Q Consensus 507 ~~l~~~ia~~L~~~~~~i~~~~~f~elGl-DSL~aveL~~~l~~~fgv~L~~~~lf--~~~Ti~~La~~L~ 574 (1152)
+.+.++++++.+.+..+...+++|++-|+ ||+-.++|...|+++||+++|++++- ...|+..+.+.+.
T Consensus 2 e~i~eIL~~i~~~~~~~~~~d~~L~~~GllDS~~~v~Li~~lE~ef~I~i~~~el~~enf~S~~~i~~~v~ 72 (73)
T TIGR01688 2 NGVLDILAEVTGSDDVKENPDLELFEEGLLDSFGTVQLLLEIQNQFDIDVPISEFDRDEWDTPNKIVAKLE 72 (73)
T ss_pred hHHHHHHHHHhcCcccccCccHHHHHccchhHHHHHHHHHHHHHHhCCccCHHHcCHHHhcCHHHHHHHHh
Confidence 35778888888776556688999999998 99999999999999999999998874 5568888887763
|
This protein is part of the teichoic acid operon in gram-positive organisms. Gram positive organisms incorporate teichoic acid in their cell walls, and in the fatty acid residues of the glycolipid component of the outer layer of the cytoplasmic membrane. This gene, dltC, encodes the alanyl carrier protein. |
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00016 Score=110.49 Aligned_cols=73 Identities=12% Similarity=0.174 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
...+++.+.++|+++|+++ .|+.+++||+||+|||++++|.+++++.||++|+..++|++||+.+|+..+.+.
T Consensus 2514 ~~~~e~~l~~iw~~vL~~~--~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~~f~~~ti~~la~~l~~~ 2586 (5163)
T PRK12316 2514 QEGLEQRLAAIWQAVLKVE--QVGLDDHFFELGGHSLLATQVVSRVRQDLGLEVPLRILFERPTLAAFAASLESG 2586 (5163)
T ss_pred CCHHHHHHHHHHHHHhCCC--ccCCCCchhhhcchHHHHHHHHHHHHHHhCCCcCHHHHhhCccHHHHhhhhhhh
Confidence 3457888999999999985 688999999999999999999999999999999999999999999999988654
|
|
| >KOG4022|consensus | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.011 Score=58.61 Aligned_cols=155 Identities=17% Similarity=0.176 Sum_probs=92.8
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC--C
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG--P 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G--~ 313 (1152)
.+.++|-||-|.+|.++.+++-.++.-+.-+. -++.. +... -.++..|-+=.++-+.+++++-+..+ +
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siD-l~eNe--------~Ad~-sI~V~~~~swtEQe~~v~~~vg~sL~gek 72 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSID-LSENE--------QADS-SILVDGNKSWTEQEQSVLEQVGSSLQGEK 72 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEe-ecccc--------cccc-eEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence 46789999999999999999998876443331 11110 1111 22344555545666677777766553 7
Q ss_pred eeEEEEcccccCcCcccccCCH-HHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANY-KNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~-e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+|+||.-||-.. .+.-..++. ...+-++.-.+...-.-.+....+ ++ +.+.+-+..--++.-|.||...|+++
T Consensus 73 vDav~CVAGGWA-GGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~H---LK--~GGLL~LtGAkaAl~gTPgMIGYGMA 146 (236)
T KOG4022|consen 73 VDAVFCVAGGWA-GGNAKSKDLVKNADLMWKQSVWTSAISAKLATTH---LK--PGGLLQLTGAKAALGGTPGMIGYGMA 146 (236)
T ss_pred cceEEEeecccc-CCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhc---cC--CCceeeecccccccCCCCcccchhHH
Confidence 999999998654 232221111 111112222222222222322222 22 33445555666677788999999999
Q ss_pred HHHHHHHHHHHHhc
Q psy616 393 NRFQTVYAKYLNNK 406 (1152)
Q Consensus 393 na~l~~la~~~~~~ 406 (1152)
|+++..|++.+..+
T Consensus 147 KaAVHqLt~SLaak 160 (236)
T KOG4022|consen 147 KAAVHQLTSSLAAK 160 (236)
T ss_pred HHHHHHHHHHhccc
Confidence 99999999999765
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00056 Score=80.55 Aligned_cols=134 Identities=22% Similarity=0.197 Sum_probs=91.4
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcC--CcEEEEecCCcchH------------HHHHHHHhC----CCcEEEEEec
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKY--STNLILSGRSKLNS------------IIYKKLKKF----NNKAIYIQVD 293 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~G--a~~vil~~R~~~~~------------~~~~~l~~~----g~~v~~~~~D 293 (1152)
.+-.+|+++||||+|-+|..+.+.|.+.- ..++.++-|....+ .+-+.+++. -.++..+..|
T Consensus 8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 35579999999999999999999999763 45777777764321 122223322 2578889999
Q ss_pred CCCHHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEE
Q psy616 294 VSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCY 373 (1152)
Q Consensus 294 vsd~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~ 373 (1152)
+++++---+.-+.- .-.-.+|+|||+|+.... .|.++..+..|+.|+.++.+.+... ..++.+|.
T Consensus 88 i~~~~LGis~~D~~-~l~~eV~ivih~AAtvrF--------de~l~~al~iNt~Gt~~~l~lak~~------~~l~~~vh 152 (467)
T KOG1221|consen 88 ISEPDLGISESDLR-TLADEVNIVIHSAATVRF--------DEPLDVALGINTRGTRNVLQLAKEM------VKLKALVH 152 (467)
T ss_pred ccCcccCCChHHHH-HHHhcCCEEEEeeeeecc--------chhhhhhhhhhhHhHHHHHHHHHHh------hhhheEEE
Confidence 98764211111100 112369999999988762 2456778999999999999886443 25678999
Q ss_pred ecCCccc
Q psy616 374 FSSSSAI 380 (1152)
Q Consensus 374 ~SS~a~~ 380 (1152)
+|..-+.
T Consensus 153 VSTAy~n 159 (467)
T KOG1221|consen 153 VSTAYSN 159 (467)
T ss_pred eehhhee
Confidence 9886554
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.005 Score=67.42 Aligned_cols=142 Identities=19% Similarity=0.180 Sum_probs=84.7
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
++|+|++|.+|+.+++.|.+.+..+.+++ |+. .....++++..|.+ ++.+|..|.+++.++++ .+|.||
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~-R~~-~~~~~~~l~~~g~~--vv~~d~~~~~~l~~al~-------g~d~v~ 69 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALV-RDP-SSDRAQQLQALGAE--VVEADYDDPESLVAALK-------GVDAVF 69 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEE-SSS-HHHHHHHHHHTTTE--EEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEE-ecc-chhhhhhhhcccce--EeecccCCHHHHHHHHc-------CCceEE
Confidence 68999999999999999999877555555 444 34455677777865 56999999988877664 689999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-C-C--hhhhHHHH
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-G-S--CDYAMGNR 394 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-g-~--~~Yaaana 394 (1152)
.+-+... . .-+....++.+++.. ....+|| +||........ + . ..+-..|.
T Consensus 70 ~~~~~~~-~----------------~~~~~~~~li~Aa~~-------agVk~~v-~ss~~~~~~~~~~~~p~~~~~~~k~ 124 (233)
T PF05368_consen 70 SVTPPSH-P----------------SELEQQKNLIDAAKA-------AGVKHFV-PSSFGADYDESSGSEPEIPHFDQKA 124 (233)
T ss_dssp EESSCSC-C----------------CHHHHHHHHHHHHHH-------HT-SEEE-ESEESSGTTTTTTSTTHHHHHHHHH
T ss_pred eecCcch-h----------------hhhhhhhhHHHhhhc-------cccceEE-EEEecccccccccccccchhhhhhh
Confidence 8776532 1 112233445555432 2477887 57755443211 1 1 11223444
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
.++ ++++..++ +++.|..|.|.
T Consensus 125 ~ie---~~l~~~~i------~~t~i~~g~f~ 146 (233)
T PF05368_consen 125 EIE---EYLRESGI------PYTIIRPGFFM 146 (233)
T ss_dssp HHH---HHHHHCTS------EBEEEEE-EEH
T ss_pred hhh---hhhhhccc------cceeccccchh
Confidence 443 44445444 67777766553
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00062 Score=73.67 Aligned_cols=150 Identities=19% Similarity=0.171 Sum_probs=104.7
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHHH----hCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLK----KFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~-~~~~~~l~----~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.|++||||=+|-=|.-+|+.|.++|..+.=+.+|+... .... .|. ..+.+++.+.+|++|...+.++++.+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v--- 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV--- 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence 58999999999999999999999999887788775322 1111 221 22456889999999999999999887
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------ 384 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------ 384 (1152)
..|-|.|.|+-.. ...+.++=....+++..|+.+|.++..-+ . +.+.-.+..|.+-.+|..
T Consensus 78 --~PdEIYNLaAQS~-----V~vSFe~P~~T~~~~~iGtlrlLEaiR~~----~--~~~~rfYQAStSE~fG~v~~~pq~ 144 (345)
T COG1089 78 --QPDEIYNLAAQSH-----VGVSFEQPEYTADVDAIGTLRLLEAIRIL----G--EKKTRFYQASTSELYGLVQEIPQK 144 (345)
T ss_pred --Cchhheecccccc-----ccccccCcceeeeechhHHHHHHHHHHHh----C--CcccEEEecccHHhhcCcccCccc
Confidence 5788888886433 22333333456778889999999985422 1 212334455555555532
Q ss_pred ------CChhhhHHHHHHHHHHHH
Q psy616 385 ------GSCDYAMGNRFQTVYAKY 402 (1152)
Q Consensus 385 ------g~~~Yaaana~l~~la~~ 402 (1152)
-.+.|++||.+-..++..
T Consensus 145 E~TPFyPrSPYAvAKlYa~W~tvN 168 (345)
T COG1089 145 ETTPFYPRSPYAVAKLYAYWITVN 168 (345)
T ss_pred cCCCCCCCCHHHHHHHHHHheeee
Confidence 357899999987766543
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00097 Score=72.84 Aligned_cols=98 Identities=9% Similarity=0.130 Sum_probs=63.5
Q ss_pred CEEEEECCc-hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGT-GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~-gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+=.||+.+ |.||.++|+.|+++|+.++++.++.... .. ....+.++.+ .+.+++.+.+ .+.++.+|
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-----~~--~~~~v~~i~v--~s~~~m~~~l---~~~~~~~D 83 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-----PE--PHPNLSIIEI--ENVDDLLETL---EPLVKDHD 83 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-----CC--CCCCeEEEEE--ecHHHHHHHH---HHHhcCCC
Confidence 466788765 5599999999999998655554432210 00 1123455554 3333433333 33456799
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhch
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKIS 347 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~ 347 (1152)
+||||||+.. ..+....+.++|..+++++-.
T Consensus 84 ivIh~AAvsd-~~~~~~~~~~~~~~~~~v~~~ 114 (229)
T PRK06732 84 VLIHSMAVSD-YTPVYMTDLEEVSASDNLNEF 114 (229)
T ss_pred EEEeCCccCC-ceehhhhhhhhhhhhhhhhhh
Confidence 9999999976 566777788889888777544
|
|
| >KOG1748|consensus | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00041 Score=66.59 Aligned_cols=74 Identities=15% Similarity=0.227 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.+.+.+...+....+++++.+.++..| .|||+|||-.||+.-.|+++||+++|-.+-=+--|+++.++|+.++
T Consensus 52 ~~v~~RVl~VVk~~dki~~~k~~~~s~f~~DLGlDSLD~VEiVMAlEEEFgiEIpd~dAdki~t~~da~~yI~~~ 126 (131)
T KOG1748|consen 52 KEVVDRVLDVVKKFDKIDPSKLTTDSDFFKDLGLDSLDTVEIVMALEEEFGIEIPDEDADKIKTVRDAADYIADK 126 (131)
T ss_pred HHHHHHHHHHHHHhhcCCccccchhhHHHHhcCCcccccchhhhhhHHHhCCccCcchhhhhCCHHHHHHHHHhc
Confidence 4466778888888899999888877666 6899999999999999999999999998888899999999999875
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0024 Score=68.53 Aligned_cols=113 Identities=13% Similarity=0.167 Sum_probs=93.7
Q ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-----------ccccccccccchhhHHH
Q psy616 707 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-----------DRLDQVNLTSTHNAILS 775 (1152)
Q Consensus 707 is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~a 775 (1152)
|++.+.++|.+..|+.++++++++++.+ +++ .++.++..|+... ..+.+..|..+..|.++
T Consensus 23 lp~m~rRRls~~~rla~~~a~~~~~~~~----~~d----~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~a 94 (218)
T PF13723_consen 23 LPPMQRRRLSRLSRLALEAALECLAEDE----QPD----AIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAA 94 (218)
T ss_pred CCHHHHcccCHHHHHHHHHHHHHHhccC----CCC----cEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHH
Confidence 9999999999999999999999996531 211 5666676666321 23456667777788999
Q ss_pred HHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCH
Q psy616 776 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISP 828 (1152)
Q Consensus 776 ~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~ 828 (1152)
+.+|...+.+||+.++..+-.|-..||..|+-.|..| ++-+|++.++..+++
T Consensus 95 G~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~ 146 (218)
T PF13723_consen 95 GYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPE 146 (218)
T ss_pred HHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCCh
Confidence 9999999999999999999999999999999999999 999999999986544
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00082 Score=78.80 Aligned_cols=81 Identities=17% Similarity=0.239 Sum_probs=59.1
Q ss_pred CCCEEEEECC---------------chh-HHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy616 235 QGGTYLITGG---------------TGR-LGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 298 (1152)
Q Consensus 235 ~~~~~LITGg---------------~gG-IG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~ 298 (1152)
+++.+||||| ++| +|.++|+.|..+|+.++++.++.... ... .+..+|+++.+
T Consensus 184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~~~~ 252 (390)
T TIGR00521 184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVSTAE 252 (390)
T ss_pred CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEeccHH
Confidence 4788899998 455 99999999999999766666554321 111 12568999999
Q ss_pred HH-HHHHHHHHhhcCCeeEEEEcccccCcCccc
Q psy616 299 KM-ISEINSIINNIGPIDGVLHIAGISGLTSNI 330 (1152)
Q Consensus 299 ~v-~~~~~~~~~~~G~idgvIh~AG~~~~~~~~ 330 (1152)
++ +.+++++ ++.+|++|||||+.. ..+.
T Consensus 253 ~~~~~~~~~~---~~~~D~~i~~Aavsd-~~~~ 281 (390)
T TIGR00521 253 EMLEAALNEL---AKDFDIFISAAAVAD-FKPK 281 (390)
T ss_pred HHHHHHHHhh---cccCCEEEEcccccc-cccc
Confidence 99 5555443 578999999999976 4443
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0033 Score=74.34 Aligned_cols=142 Identities=13% Similarity=0.115 Sum_probs=82.2
Q ss_pred CCEEEEE----CCchhHHHHHHHHHHHcCCcEEEEecCCcchHHH-------HHHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy616 236 GGTYLIT----GGTGRLGMLFSDYLINKYSTNLILSGRSKLNSII-------YKKLKKFNNKAIYIQVDVSDKLKMISEI 304 (1152)
Q Consensus 236 ~~~~LIT----Gg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~-------~~~l~~~g~~v~~~~~Dvsd~~~v~~~~ 304 (1152)
.+.+||| ||+|-||..+++.|+++|..++++.++....... ..++...+ +.++.+|+.| +.+++
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d---~~~~~ 126 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAG--VKTVWGDPAD---VKSKV 126 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcC--ceEEEecHHH---HHhhh
Confidence 4679999 9999999999999999987555444433221111 12333333 6778888876 33333
Q ss_pred HHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC
Q psy616 305 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 384 (1152)
Q Consensus 305 ~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~ 384 (1152)
. ...+|.|||++|.. ..++..+.+++ .......||++||... .|..
T Consensus 127 ~-----~~~~d~Vi~~~~~~---------------------~~~~~~ll~aa-------~~~gvkr~V~~SS~~v-yg~~ 172 (378)
T PLN00016 127 A-----GAGFDVVYDNNGKD---------------------LDEVEPVADWA-------KSPGLKQFLFCSSAGV-YKKS 172 (378)
T ss_pred c-----cCCccEEEeCCCCC---------------------HHHHHHHHHHH-------HHcCCCEEEEEccHhh-cCCC
Confidence 1 13689999987521 11344455553 2234668999999753 3321
Q ss_pred CChh--------hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 385 GSCD--------YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 385 g~~~--------Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
.... ...+|...+.+.+ ..++ +++.+..+.+-
T Consensus 173 ~~~p~~E~~~~~p~~sK~~~E~~l~---~~~l------~~~ilRp~~vy 212 (378)
T PLN00016 173 DEPPHVEGDAVKPKAGHLEVEAYLQ---KLGV------NWTSFRPQYIY 212 (378)
T ss_pred CCCCCCCCCcCCCcchHHHHHHHHH---HcCC------CeEEEeceeEE
Confidence 1100 1125666665543 3333 67777765543
|
|
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.004 Score=56.08 Aligned_cols=62 Identities=24% Similarity=0.332 Sum_probs=46.0
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEccc
Q psy616 791 INTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRL 870 (1152)
Q Consensus 791 vdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l 870 (1152)
|..+|++.+.||+.|...|++|.++.+|+.+.+....... + ......++.|+|++++||++.
T Consensus 3 i~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~-----------~-------~~~~~~~~~gDgAaA~vl~~~ 64 (80)
T PF08545_consen 3 INQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVD-----------R-------TDRQTAFIFGDGAAAVVLSRD 64 (80)
T ss_dssp EE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSH-----------T-------THHHHHTTB-EEEEEEEEEEE
T ss_pred ccccchHHHHHHHHHHHHHhhccCCEEEEEeecccccccc-----------c-------cccCcceeecchheEEEEEec
Confidence 5789999999999999999999999999999997432100 0 012234578999999999986
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.018 Score=61.28 Aligned_cols=79 Identities=23% Similarity=0.230 Sum_probs=55.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++|+||+|++|+.+++.|+++|+ +|++++|+. ..+...+.+.+.. ...+..+|..+.+++.++++ .
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~-------~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK-------G 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh-------c
Confidence 468899999999999999999999986 677777773 2233444443221 23355678888888766653 4
Q ss_pred eeEEEEccc
Q psy616 314 IDGVLHIAG 322 (1152)
Q Consensus 314 idgvIh~AG 322 (1152)
.|.||++..
T Consensus 98 ~diVi~at~ 106 (194)
T cd01078 98 ADVVFAAGA 106 (194)
T ss_pred CCEEEECCC
Confidence 688888654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.018 Score=62.73 Aligned_cols=163 Identities=18% Similarity=0.262 Sum_probs=105.9
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCc-EEEEecCCcch--HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLN--SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~-~vil~~R~~~~--~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+.++||||.|=||...+..++...-. +.+.+..-.-. ...+++.+ ...+..++..|+.++..+.-++.+ .+
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~-----~~ 80 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR-NSPNYKFVEGDIADADLVLYLFET-----EE 80 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc-cCCCceEeeccccchHHHHhhhcc-----Cc
Confidence 88999999999999999999987532 33332211100 12222222 245678999999998887766643 38
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-------------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI------------- 380 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~------------- 380 (1152)
||.|||.|.....+. +.-+--.....|+.++..|.+.+.. .+....||.+|+-.-.
T Consensus 81 id~vihfaa~t~vd~-----s~~~~~~~~~nnil~t~~Lle~~~~------sg~i~~fvhvSTdeVYGds~~~~~~~E~s 149 (331)
T KOG0747|consen 81 IDTVIHFAAQTHVDR-----SFGDSFEFTKNNILSTHVLLEAVRV------SGNIRRFVHVSTDEVYGDSDEDAVVGEAS 149 (331)
T ss_pred hhhhhhhHhhhhhhh-----hcCchHHHhcCCchhhhhHHHHHHh------ccCeeEEEEecccceecCccccccccccc
Confidence 999999997654111 1111123456789999999988643 3467789999984321
Q ss_pred cCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCC
Q psy616 381 LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWP 422 (1152)
Q Consensus 381 ~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg 422 (1152)
..+|+ ..||++|++.+.+.+....+ .+.+++.+.-+
T Consensus 150 ~~nPt-npyAasKaAaE~~v~Sy~~s-----y~lpvv~~R~n 185 (331)
T KOG0747|consen 150 LLNPT-NPYAASKAAAEMLVRSYGRS-----YGLPVVTTRMN 185 (331)
T ss_pred cCCCC-CchHHHHHHHHHHHHHHhhc-----cCCcEEEEecc
Confidence 11222 45999999999998866543 23366666543
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.022 Score=63.23 Aligned_cols=194 Identities=18% Similarity=0.189 Sum_probs=115.7
Q ss_pred CCcEEEEeeeeccCCC---CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCC
Q psy616 630 EELIAIIGMSGRFPAA---RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFE 706 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~---~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~ 706 (1152)
.++|-.+-.+|--|.. -+.+.|++....-.. +++ +.-+|-.+.+..... ...+ .+-+.++.
T Consensus 6 ~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~-f~~-~sl~F~~kIlerSGl--G~eT------------y~P~~~~~ 69 (290)
T PF08392_consen 6 PRPVYLVDFACYKPPDELRVSREEFIEHARRCGR-FDE-ESLDFQRKILERSGL--GDET------------YLPPALHE 69 (290)
T ss_pred CCCEEEEeeeecCCCcccccCHHHHHHHHHhccc-CCh-hHHHHHHHHHHhcCC--Cccc------------cCCccccc
Confidence 4578999999999975 467888887764322 111 000111111111000 0111 12222333
Q ss_pred CCHH--HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC
Q psy616 707 ISPL--EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL 784 (1152)
Q Consensus 707 is~~--ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l 784 (1152)
++|. -....+-...++-.++.++|+.+|+.|++++ .+++.++... ..-.++.+|...|++
T Consensus 70 ~p~~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dId----iLVvncs~f~--------------ptPSLsamIvnr~~m 131 (290)
T PF08392_consen 70 IPPDPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDID----ILVVNCSLFN--------------PTPSLSAMIVNRYGM 131 (290)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECcCCC--------------cCCcHHHHHHHHhCC
Confidence 3332 1112244556777889999999999887765 4445443321 111356677777788
Q ss_pred CCCccccc---ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccc
Q psy616 785 KGPVMAIN---TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 861 (1152)
Q Consensus 785 ~GPs~tvd---taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG 861 (1152)
+.-..+++ -|||+|+.+|.+|.+.|+.-.-..|||..++.+ ++..|.+-.+..+++ ...++.|
T Consensus 132 r~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~-s~~~Y~G~~rsmlv~-------------NcLFr~G 197 (290)
T PF08392_consen 132 RSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENI-SANWYRGNDRSMLVS-------------NCLFRMG 197 (290)
T ss_pred CcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeec-ccccccCCcHHHhhc-------------cccccCC
Confidence 87544432 489999999999999999999999999999974 444444433333333 1235678
Q ss_pred cEEEEEcccc
Q psy616 862 VVAVVLKRLS 871 (1152)
Q Consensus 862 ~~~vvLk~l~ 871 (1152)
+++++|-...
T Consensus 198 gAAvLLSn~~ 207 (290)
T PF08392_consen 198 GAAVLLSNKP 207 (290)
T ss_pred ceeEEeecCc
Confidence 8888887543
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.019 Score=66.85 Aligned_cols=77 Identities=22% Similarity=0.291 Sum_probs=60.7
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+.+||.|+ |++|+.+|..|+++|...|.+.+|+.... +++. ..+.++..+++|+.|.+++.+++++. |
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~---~~i~~~~~~~v~~~~vD~~d~~al~~li~~~-------d 70 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKC---ARIAELIGGKVEALQVDAADVDALVALIKDF-------D 70 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHH---HHHHhhccccceeEEecccChHHHHHHHhcC-------C
Confidence 45788887 99999999999999988999999985322 2222 22458999999999999998888652 9
Q ss_pred EEEEccccc
Q psy616 316 GVLHIAGIS 324 (1152)
Q Consensus 316 gvIh~AG~~ 324 (1152)
.|||++...
T Consensus 71 ~VIn~~p~~ 79 (389)
T COG1748 71 LVINAAPPF 79 (389)
T ss_pred EEEEeCCch
Confidence 999998643
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.011 Score=70.20 Aligned_cols=76 Identities=24% Similarity=0.359 Sum_probs=55.0
Q ss_pred EEEECCchhHHHHHHHHHHHcCCc-EEEEecCCcch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~-~vil~~R~~~~-~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
++|.|+ |.+|..+++.|++++.. .|++.+|+... ++..+++ .+.++.++++|+.|.+++.+++++ .|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~-------~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLRG-------CDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHTT-------SSE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHhc-------CCE
Confidence 589999 99999999999999866 88999998532 2222222 567899999999999998777643 499
Q ss_pred EEEccccc
Q psy616 317 VLHIAGIS 324 (1152)
Q Consensus 317 vIh~AG~~ 324 (1152)
||||+|-.
T Consensus 71 Vin~~gp~ 78 (386)
T PF03435_consen 71 VINCAGPF 78 (386)
T ss_dssp EEE-SSGG
T ss_pred EEECCccc
Confidence 99999864
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.033 Score=66.15 Aligned_cols=120 Identities=16% Similarity=0.189 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccc-cc
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINT-AC 795 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdt-aC 795 (1152)
+--+..++.+||+++|+++++++ +++-++.+.+ ..-.++.++...+|++. ..+-|.. +|
T Consensus 135 em~i~~A~~~aL~~aGi~p~dID-----~LIvs~T~~~-------------~~Pslaa~l~~~LGLr~~v~~~dL~gmGC 196 (466)
T PLN00415 135 ELVIFGALNSLFKKTGIEPREVG-----IFIVNCSLFN-------------PNPSLSSMIVNRYKLKTDVKTYNLSGMGC 196 (466)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEECcCCC-------------CCchHHHHHHHHhCCCCCceEEEeccccc
Confidence 33444577788899999987765 3332222211 01235677888889972 4566776 99
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEccc
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRL 870 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l 870 (1152)
|+++.+|..|.+.++++....|||.+++.+. ...+ ..+.+.. -=.-..+|.|++++||...
T Consensus 197 sggv~aL~lA~~ll~a~~~~~aLVVs~E~~S-~~~~---------~~~dr~~----lv~n~LFgDGAAAvlLs~~ 257 (466)
T PLN00415 197 SAGAISVDLATNLLKANPNTYAVIVSTENMT-LSMY---------RGNDRSM----LVPNCLFRVGGAAVMLSNR 257 (466)
T ss_pred hHHHHHHHHHHHHHHhCCCCEEEEEEEeccc-cccc---------CCCcHhH----hccceeecccceEEEEecC
Confidence 9999999999999999999999999999732 1110 0000000 0002356999999999863
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.075 Score=59.30 Aligned_cols=129 Identities=16% Similarity=0.150 Sum_probs=81.4
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
.+|||||+|.+|..+++.|.++|..+.++.++.+... .+. ..+.+...|+.+...+...++ .++++
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~----~~~---~~v~~~~~d~~~~~~l~~a~~-------G~~~~ 67 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAA----ALA---GGVEVVLGDLRDPKSLVAGAK-------GVDGV 67 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHH----hhc---CCcEEEEeccCCHhHHHHHhc-------cccEE
Confidence 5899999999999999999999775555554443322 222 567889999999888766553 57777
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHHH
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 397 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~ 397 (1152)
++..+... ... . ..........+..+.. . .....++.+|++.+.. .....|..+|...+
T Consensus 68 ~~i~~~~~-~~~-~---------~~~~~~~~~~~~a~~a-------~-~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e 126 (275)
T COG0702 68 LLISGLLD-GSD-A---------FRAVQVTAVVRAAEAA-------G-AGVKHGVSLSVLGADA--ASPSALARAKAAVE 126 (275)
T ss_pred EEEecccc-ccc-c---------hhHHHHHHHHHHHHHh-------c-CCceEEEEeccCCCCC--CCccHHHHHHHHHH
Confidence 77776532 111 1 1112233333444331 1 2345567666654432 35578999988887
Q ss_pred HHHH
Q psy616 398 VYAK 401 (1152)
Q Consensus 398 ~la~ 401 (1152)
....
T Consensus 127 ~~l~ 130 (275)
T COG0702 127 AALR 130 (275)
T ss_pred HHHH
Confidence 6654
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.014 Score=63.65 Aligned_cols=82 Identities=23% Similarity=0.305 Sum_probs=50.0
Q ss_pred CCCEEEEECCc----------------hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy616 235 QGGTYLITGGT----------------GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 298 (1152)
Q Consensus 235 ~~~~~LITGg~----------------gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~ 298 (1152)
.++.+|||+|. |-+|.++|++|.++|+.++++.+-...... .+ ..+..+..+.. ..
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~-~~~~~~~~V~s----~~ 73 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI-NNQLELHPFEG----II 73 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc-CCceeEEEEec----HH
Confidence 46788888875 899999999999999977666553221110 00 01222333333 23
Q ss_pred HHHHHHHHHHhhcCCeeEEEEcccccC
Q psy616 299 KMISEINSIINNIGPIDGVLHIAGISG 325 (1152)
Q Consensus 299 ~v~~~~~~~~~~~G~idgvIh~AG~~~ 325 (1152)
++...+.++... ...|.|||+|++..
T Consensus 74 d~~~~l~~~~~~-~~~D~VIH~AAvsD 99 (229)
T PRK09620 74 DLQDKMKSIITH-EKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHHHHhcc-cCCCEEEECccccc
Confidence 333444444332 25799999999865
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.08 Score=54.31 Aligned_cols=140 Identities=7% Similarity=0.077 Sum_probs=91.6
Q ss_pred ceEEEEecCchhHHHHHHHHccCCc-EEEEecCC--cccc-------ccCCC--ccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 29 NNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSD--NIKI-------SPNDT--VHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 29 ~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~--~~~~-------~~~~~--~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
+++||+....+++.+++++|-+++. ++++.... .... ..... ..+..+..++++..++++.+......
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3689999999999999999988743 33333332 1111 11112 13666778999999999999999999
Q ss_pred cCEEEEeCCCCCccccc-------------ChHHHHHHHHHHHhCCCCceEEEEEcccccc-cCCccchhhhHHHHHHHH
Q psy616 97 IDSVFYLWPLEDKNCIY-------------NIMPIIYFLQAVKKSKLYLRKLIISGISINK-KNEEDLYYCYFNSWVAFE 162 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~~~-------------~~~~l~~l~qal~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~g~~ 162 (1152)
+|.+||..+........ ++.+-+.+.|++.. .....+++++...... ......+....+++.+|+
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~ 159 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLT 159 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchhhccCCCCChhHHHHHHHHHHHH
Confidence 99999998763321111 23566778888776 2244555555432222 223344555667789999
Q ss_pred HHHHHHc
Q psy616 163 RSLHIIM 169 (1152)
Q Consensus 163 r~~~~e~ 169 (1152)
++++.|+
T Consensus 160 ~~la~e~ 166 (167)
T PF00106_consen 160 QSLAAEL 166 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999885
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.035 Score=63.58 Aligned_cols=121 Identities=15% Similarity=0.049 Sum_probs=77.5
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+.+...+.|||+.|.+|..+|..|+.++. ..++|+.+. ..+....+|....... ...+.+|+.+.. +.+
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~-~~~g~a~Dl~~~~~~~--~v~~~td~~~~~-------~~l 74 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV-GAPGVAADLSHIDTPA--KVTGYADGELWE-------KAL 74 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC-CCcccccchhhcCcCc--eEEEecCCCchH-------HHh
Confidence 34566899999999999999999997664 478888773 2222222343322222 233555533322 223
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCC
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSS 377 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~ 377 (1152)
...|.||++||... . + .. .+...+..|+..+..+.+.+. ....+.+|+++|.
T Consensus 75 ~gaDvVVitaG~~~-~-~--~~---tR~dll~~N~~i~~~i~~~i~-------~~~~~~iviv~SN 126 (321)
T PTZ00325 75 RGADLVLICAGVPR-K-P--GM---TRDDLFNTNAPIVRDLVAAVA-------SSAPKAIVGIVSN 126 (321)
T ss_pred CCCCEEEECCCCCC-C-C--CC---CHHHHHHHHHHHHHHHHHHHH-------HHCCCeEEEEecC
Confidence 46899999999854 2 1 22 356689999999888887743 2355678888773
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.26 Score=54.89 Aligned_cols=154 Identities=12% Similarity=0.040 Sum_probs=93.8
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP 105 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~ 105 (1152)
..+++||.....+++.+++++|.+.+. ++.+.... .......-..+..+..++++...+++.+.+..+.+|.|||...
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag 86 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHG-GDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAG 86 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc-cccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 456788888899999999999987765 44443321 1111111224677889999999999999988888999999876
Q ss_pred CCCcc--------------c--------ccChHHHHHHHHHHHhCC---CCceEEEEEccccccc-CCccchhhhHHHHH
Q psy616 106 LEDKN--------------C--------IYNIMPIIYFLQAVKKSK---LYLRKLIISGISINKK-NEEDLYYCYFNSWV 159 (1152)
Q Consensus 106 ~~~~~--------------~--------~~~~~~l~~l~qal~~~~---~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~ 159 (1152)
..... . .-++.+.+.+++++.... ...+++.++....... .....+....+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 166 (266)
T PRK06171 87 INIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALN 166 (266)
T ss_pred ccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHHHHH
Confidence 42110 0 012345567777754321 1234444443221111 11223333446678
Q ss_pred HHHHHHHHHcCCCcEEEEEecC
Q psy616 160 AFERSLHIIMPETQISIVFAEK 181 (1152)
Q Consensus 160 g~~r~~~~e~p~~~~~~vd~~~ 181 (1152)
+|+|+++.|+....+++.-+.+
T Consensus 167 ~l~~~la~e~~~~gi~v~~v~p 188 (266)
T PRK06171 167 SFTRSWAKELGKHNIRVVGVAP 188 (266)
T ss_pred HHHHHHHHHhhhcCeEEEEEec
Confidence 9999999998654444444443
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.36 Score=53.38 Aligned_cols=154 Identities=9% Similarity=0.050 Sum_probs=94.0
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP 105 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~ 105 (1152)
.++++||.....+++.+++++|.+.+. ++.+............-..+..+..++++..++++.+.+..+.+|.|||..+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag 84 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAG 84 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 457788988999999999999987765 4444433211011111124677888999999999999888888999999876
Q ss_pred CCCcc-------------cccChHHHHHHHHHHHh----CCCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHHH
Q psy616 106 LEDKN-------------CIYNIMPIIYFLQAVKK----SKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLHI 167 (1152)
Q Consensus 106 ~~~~~-------------~~~~~~~l~~l~qal~~----~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~~ 167 (1152)
..... ...++.+.+.+++++.. .....++++++....... .....+.....++.+|+|+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~ 164 (252)
T PRK07856 85 GSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAV 164 (252)
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHHHH
Confidence 42211 11234566677776532 111234455544322111 1222334444667899999999
Q ss_pred HcCCCcEEEEEecC
Q psy616 168 IMPETQISIVFAEK 181 (1152)
Q Consensus 168 e~p~~~~~~vd~~~ 181 (1152)
|+... +++..+.+
T Consensus 165 e~~~~-i~v~~i~P 177 (252)
T PRK07856 165 EWAPK-VRVNAVVV 177 (252)
T ss_pred HhcCC-eEEEEEEe
Confidence 98543 55544443
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.44 Score=52.94 Aligned_cols=142 Identities=12% Similarity=0.085 Sum_probs=90.8
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP 105 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~ 105 (1152)
+++++||.....+++.+++++|.+.|. |+.+..... . ...-..+..+-.++++..++++++.+..+.+|.|||...
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~-~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag 81 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP-S--YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc-c--cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 457899999999999999999988775 444433211 0 011224677888999999999999988888999999876
Q ss_pred CCCcc-----c--------ccChHHHHHHHHHHHhC---CCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHHHH
Q psy616 106 LEDKN-----C--------IYNIMPIIYFLQAVKKS---KLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLHII 168 (1152)
Q Consensus 106 ~~~~~-----~--------~~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~~e 168 (1152)
..... . .-++.+.+.++|++... ....+++.++....... .....+....+++.++.|+++.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~e 161 (258)
T PRK06398 82 IESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVD 161 (258)
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHHH
Confidence 42111 1 12345666777775421 12344555544322111 12223444456688999999999
Q ss_pred cCC
Q psy616 169 MPE 171 (1152)
Q Consensus 169 ~p~ 171 (1152)
+..
T Consensus 162 ~~~ 164 (258)
T PRK06398 162 YAP 164 (258)
T ss_pred hCC
Confidence 864
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.074 Score=57.91 Aligned_cols=122 Identities=14% Similarity=0.158 Sum_probs=85.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++-++-|-|++|=+|+-++.+|++.|-..||=.+-++-...-.+-+-.+ ++|.+...|+.|+++++++++. -
T Consensus 60 sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL-GQvl~~~fd~~DedSIr~vvk~-------s 131 (391)
T KOG2865|consen 60 SGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL-GQVLFMKFDLRDEDSIRAVVKH-------S 131 (391)
T ss_pred cceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc-cceeeeccCCCCHHHHHHHHHh-------C
Confidence 4557778899999999999999999875555443333222212222222 5799999999999999998864 4
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI 380 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~ 380 (1152)
+.|||.-|.-. .-.+.+.+ ++|+.++..|.+.+ ++.....||.+|+..+.
T Consensus 132 NVVINLIGrd~---eTknf~f~------Dvn~~~aerlAric-------ke~GVerfIhvS~Lgan 181 (391)
T KOG2865|consen 132 NVVINLIGRDY---ETKNFSFE------DVNVHIAERLARIC-------KEAGVERFIHVSCLGAN 181 (391)
T ss_pred cEEEEeecccc---ccCCcccc------cccchHHHHHHHHH-------HhhChhheeehhhcccc
Confidence 78999888643 22334444 37888988888884 33456679999987644
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.1 Score=55.00 Aligned_cols=84 Identities=20% Similarity=0.254 Sum_probs=63.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYS--TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga--~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+.++||||+|=.|.+|.+.+.++|. .+.++.+.. .||+++.+++++++++. +.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk--------------------d~DLt~~a~t~~lF~~e-----kP 56 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK--------------------DADLTNLADTRALFESE-----KP 56 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc--------------------cccccchHHHHHHHhcc-----CC
Confidence 5799999999999999999999987 566665443 37999999999999874 46
Q ss_pred eEEEEcccccCcCcccccC--CHHHHHHHHhhhch
Q psy616 315 DGVLHIAGISGLTSNILEA--NYKNFYSVLSSKIS 347 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~--~~e~~~~~~~~kv~ 347 (1152)
..|||.|...+ +.+.+. ..+-|..-+.+|-.
T Consensus 57 thVIhlAAmVG--Glf~N~~ynldF~r~Nl~indN 89 (315)
T KOG1431|consen 57 THVIHLAAMVG--GLFHNNTYNLDFIRKNLQINDN 89 (315)
T ss_pred ceeeehHhhhc--chhhcCCCchHHHhhcceechh
Confidence 67899887765 455554 45556666655543
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.047 Score=62.76 Aligned_cols=72 Identities=19% Similarity=0.245 Sum_probs=49.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHc-CCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~-Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.+++++|||++|.||..+|++|+++ |...++++.|+.. ...+..++. ..|+. ++. +.+.
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~---------~~~i~---~l~-------~~l~ 214 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG---------GGKIL---SLE-------EALP 214 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc---------cccHH---hHH-------HHHc
Confidence 5789999999999999999999865 6778999988742 222222221 12222 122 2344
Q ss_pred CeeEEEEcccccC
Q psy616 313 PIDGVLHIAGISG 325 (1152)
Q Consensus 313 ~idgvIh~AG~~~ 325 (1152)
..|.|||+++...
T Consensus 215 ~aDiVv~~ts~~~ 227 (340)
T PRK14982 215 EADIVVWVASMPK 227 (340)
T ss_pred cCCEEEECCcCCc
Confidence 6899999998754
|
|
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.42 Score=53.02 Aligned_cols=185 Identities=22% Similarity=0.270 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccccccchh
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 797 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCsS 797 (1152)
+.+++-+++..||+.||+.+++++ .+++ ++...+. +.++..+..|+ =|-+-+..|||+
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId-----~~~a---GDLlnQ~------------i~s~f~ar~l~--iPf~GlygACST 108 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDID-----YLFA---GDLLNQI------------ISSSFAARDLG--IPFLGLYGACST 108 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-S-----EEEE---EETTCCC------------CHHHHHHHHHT----EEEB--CCCH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCe-----EEEe---hhhhhhh------------HHHHHHHHhcC--CCccchhhHHHH
Confidence 468888999999999999888776 5555 2322211 12333333333 377889999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCC
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 877 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dg 877 (1152)
+..+|.+|...+..|-.|.++++..+-.-+.+..+-|- + .=|.-||-. +.= ---|+|+++|.+..
T Consensus 109 ~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P----~-EyG~Qrp~t--Aqw--TVTGaGa~il~~~~------ 173 (329)
T PF07451_consen 109 MMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFP----T-EYGGQRPPT--AQW--TVTGAGAAILSKEG------ 173 (329)
T ss_dssp HHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT-------G-GGT----TT----E--E--EEEEEEEESS-------
T ss_pred HHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCc----h-hccCCCCCc--ccE--EEeceEEEEEecCC------
Confidence 99999999999999999999999998766666544331 0 012223322 122 23467788887432
Q ss_pred CceEEEEEEEEEecCCC--CCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH--HHHHHH
Q psy616 878 DPIHAIIRGSGINYDGK--TNGITAPN------GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE--INALHD 947 (1152)
Q Consensus 878 d~i~avI~g~a~~~dG~--~~~~~~P~------~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E--~~al~~ 947 (1152)
.. -.|.+.-+ |+ ..|++.|+ .++-.+.|.+=+++-|.+|+|-|.|-+ ||--+ .+-+.+
T Consensus 174 ~~--p~It~~T~---GkVvD~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvT-------GDLg~vG~~il~~ 241 (329)
T PF07451_consen 174 SG--PRITHATI---GKVVDMGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVT-------GDLGKVGRKILRD 241 (329)
T ss_dssp -S--EEEEEEE-------B-SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEE-------SS-HHHHHHHHHH
T ss_pred CC--cEEEEEEE---EEEEEcCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEe-------cchHHHHHHHHHH
Confidence 22 22333222 32 35677887 345567899999999999999999987 45443 345555
Q ss_pred Hhcc
Q psy616 948 VFKN 951 (1152)
Q Consensus 948 ~f~~ 951 (1152)
.+.+
T Consensus 242 Ll~~ 245 (329)
T PF07451_consen 242 LLKE 245 (329)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.49 Score=52.82 Aligned_cols=142 Identities=11% Similarity=0.065 Sum_probs=86.0
Q ss_pred CceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccccc-CCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC
Q psy616 28 KNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISP-NDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP 105 (1152)
Q Consensus 28 ~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~-~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~ 105 (1152)
..+++|....++++..++++|.+.+. |+.+... ...... ..-..+..+..++++..++++.+.+..+.+|.|||..+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag 82 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRN-PARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG 82 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-hhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 35688888899999999999988775 4444432 111111 11234778888999999999999988889999999887
Q ss_pred CCCccc-------------ccChHHHHHHHHHHH----hCCCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHHH
Q psy616 106 LEDKNC-------------IYNIMPIIYFLQAVK----KSKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLHI 167 (1152)
Q Consensus 106 ~~~~~~-------------~~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~~ 167 (1152)
...... .-++.+.+.+++++. +.+ ..++++++....... .....+.....++.++.++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~ 161 (270)
T PRK06179 83 VGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDH 161 (270)
T ss_pred CCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 532111 112345566666642 222 234444443211111 1112233333556778888888
Q ss_pred HcCC
Q psy616 168 IMPE 171 (1152)
Q Consensus 168 e~p~ 171 (1152)
|+.+
T Consensus 162 el~~ 165 (270)
T PRK06179 162 EVRQ 165 (270)
T ss_pred HHhh
Confidence 7643
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.077 Score=64.30 Aligned_cols=75 Identities=12% Similarity=0.199 Sum_probs=53.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.+++++|+|+++ +|+++|+.|+++|+.+.+ ..+.. ..++..+++.+.| +.++..|..+ +..+
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~-~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~------------~~~~ 67 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVIL-TDEKEEDQLKEALEELGELG--IELVLGEYPE------------EFLE 67 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEE-EeCCchHHHHHHHHHHHhcC--CEEEeCCcch------------hHhh
Confidence 468899999877 999999999999985544 44442 2233345565556 4467778776 1235
Q ss_pred CeeEEEEcccccC
Q psy616 313 PIDGVLHIAGISG 325 (1152)
Q Consensus 313 ~idgvIh~AG~~~ 325 (1152)
..|.||+++|+..
T Consensus 68 ~~d~vv~~~g~~~ 80 (450)
T PRK14106 68 GVDLVVVSPGVPL 80 (450)
T ss_pred cCCEEEECCCCCC
Confidence 7899999999754
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.11 Score=55.30 Aligned_cols=147 Identities=22% Similarity=0.237 Sum_probs=95.7
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHH-----hCCCcEEEEEecCCCHHHHHHHH
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLK-----KFNNKAIYIQVDVSDKLKMISEI 304 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~-----~~g~~v~~~~~Dvsd~~~v~~~~ 304 (1152)
..+++.++.||||=+|-=|.-+|+.|..+|..+--+++|+.. ....++.|- ..|+.....-.|++|...+.+++
T Consensus 23 ~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I 102 (376)
T KOG1372|consen 23 GAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI 102 (376)
T ss_pred cCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence 456788999999999999999999999999987777777643 222333332 23566777889999999999999
Q ss_pred HHHHhhcCCeeEEEEcccccCcCc---ccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc
Q psy616 305 NSIINNIGPIDGVLHIAGISGLTS---NILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL 381 (1152)
Q Consensus 305 ~~~~~~~G~idgvIh~AG~~~~~~---~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~ 381 (1152)
+.+ ..+-|.|.|.-.. .+ .+.+.|. ++...|++.|..+.... .-..... .+-.|.+-++
T Consensus 103 ~~i-----kPtEiYnLaAQSH-VkvSFdlpeYTA-------eVdavGtLRlLdAi~~c---~l~~~Vr--fYQAstSEly 164 (376)
T KOG1372|consen 103 STI-----KPTEVYNLAAQSH-VKVSFDLPEYTA-------EVDAVGTLRLLDAIRAC---RLTEKVR--FYQASTSELY 164 (376)
T ss_pred hcc-----Cchhhhhhhhhcc-eEEEeeccccee-------eccchhhhhHHHHHHhc---Cccccee--EEecccHhhc
Confidence 887 3556677765433 11 2233333 46677888888774321 0111211 2234444444
Q ss_pred C------------CCCChhhhHHHHH
Q psy616 382 G------------DFGSCDYAMGNRF 395 (1152)
Q Consensus 382 g------------~~g~~~Yaaana~ 395 (1152)
| ..-.+.|+++|.+
T Consensus 165 Gkv~e~PQsE~TPFyPRSPYa~aKmy 190 (376)
T KOG1372|consen 165 GKVQEIPQSETTPFYPRSPYAAAKMY 190 (376)
T ss_pred ccccCCCcccCCCCCCCChhHHhhhh
Confidence 4 2235789999875
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.094 Score=52.37 Aligned_cols=76 Identities=13% Similarity=0.116 Sum_probs=52.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++.++|.|+ ||.|++++.+|++.|+.+|.++.|+.. .+++.+.+ .+..+.++.. .+.. +....
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~--~~~~~~~~~~--~~~~----------~~~~~ 75 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF--GGVNIEAIPL--EDLE----------EALQE 75 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH--TGCSEEEEEG--GGHC----------HHHHT
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc--CccccceeeH--HHHH----------HHHhh
Confidence 5889999996 899999999999999999999999843 34444444 2333544443 2221 11236
Q ss_pred eeEEEEcccccC
Q psy616 314 IDGVLHIAGISG 325 (1152)
Q Consensus 314 idgvIh~AG~~~ 325 (1152)
.|+||++.+...
T Consensus 76 ~DivI~aT~~~~ 87 (135)
T PF01488_consen 76 ADIVINATPSGM 87 (135)
T ss_dssp ESEEEE-SSTTS
T ss_pred CCeEEEecCCCC
Confidence 899999987643
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.15 Score=61.80 Aligned_cols=110 Identities=11% Similarity=0.052 Sum_probs=67.4
Q ss_pred EECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEEEc
Q psy616 241 ITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHI 320 (1152)
Q Consensus 241 ITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvIh~ 320 (1152)
|+||.||+|.++++.|...|+.++. ..+.+... ...+..+++++++.
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~-~~~~~~~~--------------------------------~~~~~~~~~~~~~d 89 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVA-NNDGGLTW--------------------------------AAGWGDRFGALVFD 89 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeee-cCcccccc--------------------------------ccCcCCcccEEEEE
Confidence 7788899999999999999885444 33332100 00112245555543
Q ss_pred ccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHHHHHH
Q psy616 321 AGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYA 400 (1152)
Q Consensus 321 AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~~la 400 (1152)
+-... +.+++. +.+.+.+.+++.| . +.+.||+++|..+.. +...|+++|+++++|+
T Consensus 90 ~~~~~--------~~~~l~--------~~~~~~~~~l~~l---~--~~griv~i~s~~~~~---~~~~~~~akaal~gl~ 145 (450)
T PRK08261 90 ATGIT--------DPADLK--------ALYEFFHPVLRSL---A--PCGRVVVLGRPPEAA---ADPAAAAAQRALEGFT 145 (450)
T ss_pred CCCCC--------CHHHHH--------HHHHHHHHHHHhc---c--CCCEEEEEccccccC---CchHHHHHHHHHHHHH
Confidence 32111 122222 3334444444443 2 346899999987754 3457999999999999
Q ss_pred HHHHhcc
Q psy616 401 KYLNNKN 407 (1152)
Q Consensus 401 ~~~~~~g 407 (1152)
+.+..+.
T Consensus 146 rsla~E~ 152 (450)
T PRK08261 146 RSLGKEL 152 (450)
T ss_pred HHHHHHh
Confidence 9998875
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.43 Score=52.08 Aligned_cols=152 Identities=9% Similarity=0.032 Sum_probs=92.5
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------c--CCCccEEEcCCChhhHHHHHHHHHhcCC-
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------P--NDTVHYKINKDNINDYTFILNKIYEKDK- 95 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~--~~~~~~~i~p~~~~d~~~l~~~l~~~~~- 95 (1152)
.++++||.....+++.+++++|.+.|. |+.+... ..... . ..-..|..+-.++++..++++.+.++.+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~-~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQD-QSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC-HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 356889999999999999999988776 4444322 11110 0 1112467788899999999999988766
Q ss_pred CcCEEEEeCCC-CCc-----cccc--------ChHHHHHHHHHHH----hCCCCceEEEEEcccccccCCccchhhhHHH
Q psy616 96 KIDSVFYLWPL-EDK-----NCIY--------NIMPIIYFLQAVK----KSKLYLRKLIISGISINKKNEEDLYYCYFNS 157 (1152)
Q Consensus 96 ~~~~iv~lw~~-~~~-----~~~~--------~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 157 (1152)
.+|.+||.++. ... ...+ .+.+.+.++|++. +.+....++.++... ... ....+....++
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~-~~~-~~~~Y~asKaa 160 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHD-DHQ-DLTGVESSNAL 160 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCC-CcchhHHHHHH
Confidence 89999999852 111 0111 1234455555532 222234455554321 111 12335555677
Q ss_pred HHHHHHHHHHHcCCCcEEEEEecC
Q psy616 158 WVAFERSLHIIMPETQISIVFAEK 181 (1152)
Q Consensus 158 ~~g~~r~~~~e~p~~~~~~vd~~~ 181 (1152)
+.+|.|+++.|+....+++..+.|
T Consensus 161 l~~~~~~la~el~~~~Irvn~v~P 184 (227)
T PRK08862 161 VSGFTHSWAKELTPFNIRVGGVVP 184 (227)
T ss_pred HHHHHHHHHHHHhhcCcEEEEEec
Confidence 899999999998654444444443
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.18 Score=57.91 Aligned_cols=116 Identities=13% Similarity=0.046 Sum_probs=74.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
..++|||++|.+|..+|..|+.++. ..++|+...+ .+....+|........ ..++++.++.. +.+...|
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~a~Dl~~~~~~~~--i~~~~~~~d~~-------~~l~~aD 88 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGVAADVSHINTPAQ--VRGFLGDDQLG-------DALKGAD 88 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCeeEchhhhCCcCce--EEEEeCCCCHH-------HHcCCCC
Confidence 5799999999999999999998765 4688887765 2221223333222222 22333322222 2345799
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecC
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSS 376 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS 376 (1152)
.|||.||... . + .+ .+...+..|+..+..+.+.+..+ ..+.+|+++|
T Consensus 89 iVVitAG~~~-~-~--g~---~R~dll~~N~~i~~~i~~~i~~~-------~p~aivivvS 135 (323)
T PLN00106 89 LVIIPAGVPR-K-P--GM---TRDDLFNINAGIVKTLCEAVAKH-------CPNALVNIIS 135 (323)
T ss_pred EEEEeCCCCC-C-C--CC---CHHHHHHHHHHHHHHHHHHHHHH-------CCCeEEEEeC
Confidence 9999999855 2 1 22 36678889999888888775332 4556777766
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.47 Score=52.12 Aligned_cols=152 Identities=11% Similarity=0.059 Sum_probs=93.8
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccc----ccCC--CccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKI----SPND--TVHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~----~~~~--~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
+.+++||.....+++..++++|.+.+. ++.+........ .... -..+..+-.++++..++++.+.+....+|.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 457789999999999999999988775 544443221110 1111 124667788999999999999888888999
Q ss_pred EEEeCCCCCcc-------------cccChHHHHHHHHHHHh----CCCCceEEEEEccccccc-CCccchhhhHHHHHHH
Q psy616 100 VFYLWPLEDKN-------------CIYNIMPIIYFLQAVKK----SKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAF 161 (1152)
Q Consensus 100 iv~lw~~~~~~-------------~~~~~~~l~~l~qal~~----~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~ 161 (1152)
|||..+..... ...++.+.+.+++++.. .+...+++++++...... ...+.+....+++.++
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~ 163 (248)
T TIGR01832 84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGL 163 (248)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHH
Confidence 99987652211 11234566777777542 221234444443221111 1223344445668899
Q ss_pred HHHHHHHcC--CCcEEEEE
Q psy616 162 ERSLHIIMP--ETQISIVF 178 (1152)
Q Consensus 162 ~r~~~~e~p--~~~~~~vd 178 (1152)
.|+++.|+. ++++.+|.
T Consensus 164 ~~~la~e~~~~gi~v~~v~ 182 (248)
T TIGR01832 164 TKLLANEWAAKGINVNAIA 182 (248)
T ss_pred HHHHHHHhCccCcEEEEEE
Confidence 999999985 45554443
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.52 E-value=1.1 Score=49.68 Aligned_cols=153 Identities=12% Similarity=0.021 Sum_probs=92.2
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcc---ccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNI---KISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFY 102 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~---~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~ 102 (1152)
.++++||.....+++..++++|.+.+. ++.+...... ......-..+..+..++++..++++.+.+..+.+|.|||
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 457889999999999999999988775 4443222111 111111234677888999999999999988888999999
Q ss_pred eCCCCCccc-----c--------cChHHHHHHHHHHHh----CCCCceEEEEEccccc-cc-CCccchhhhHHHHHHHHH
Q psy616 103 LWPLEDKNC-----I--------YNIMPIIYFLQAVKK----SKLYLRKLIISGISIN-KK-NEEDLYYCYFNSWVAFER 163 (1152)
Q Consensus 103 lw~~~~~~~-----~--------~~~~~l~~l~qal~~----~~~~~~~~~v~~~~~~-~~-~~~~~~~~~~~~~~g~~r 163 (1152)
..+...... . -++.+.+++++++.. .+ ..+++.++..... .. .....+....+++.+|+|
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~ 164 (255)
T PRK06463 86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTR 164 (255)
T ss_pred CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHH
Confidence 876521110 1 123445555555332 22 3345555432211 11 112223444466889999
Q ss_pred HHHHHcCCCcEEEEEec
Q psy616 164 SLHIIMPETQISIVFAE 180 (1152)
Q Consensus 164 ~~~~e~p~~~~~~vd~~ 180 (1152)
+++.|+....+++..+.
T Consensus 165 ~la~e~~~~~i~v~~i~ 181 (255)
T PRK06463 165 RLAFELGKYGIRVNAVA 181 (255)
T ss_pred HHHHHhhhcCeEEEEEe
Confidence 99999865444444333
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.81 Score=50.75 Aligned_cols=154 Identities=8% Similarity=-0.046 Sum_probs=93.7
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------c---CCC-ccEEEcCCChhhHHHHHHHHHhcC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------P---NDT-VHYKINKDNINDYTFILNKIYEKD 94 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~---~~~-~~~~i~p~~~~d~~~l~~~l~~~~ 94 (1152)
..+++||.....+++.+++++|.+++. |+.+.... .... . ... ..+..+..++++..++++.+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDA-ALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 456788988999999999999988775 44443321 1110 0 111 136678889999999999999888
Q ss_pred CCcCEEEEeCCCCCcc-----c--------ccChHHHHHHHHHHHhC---CCCceEEEEEccccccc-CCccchhhhHHH
Q psy616 95 KKIDSVFYLWPLEDKN-----C--------IYNIMPIIYFLQAVKKS---KLYLRKLIISGISINKK-NEEDLYYCYFNS 157 (1152)
Q Consensus 95 ~~~~~iv~lw~~~~~~-----~--------~~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~ 157 (1152)
+.+|.+||..+..... . .-++.+.+.+++++... ....+++.+++...... .....+....++
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa 164 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHG 164 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHH
Confidence 8999999987652110 0 11345667777774321 11234444433211111 112223344466
Q ss_pred HHHHHHHHHHHcCCCcEEEEEecC
Q psy616 158 WVAFERSLHIIMPETQISIVFAEK 181 (1152)
Q Consensus 158 ~~g~~r~~~~e~p~~~~~~vd~~~ 181 (1152)
+.+++|+++.|+....+++..+.+
T Consensus 165 ~~~~~~~la~el~~~gIrvn~v~P 188 (260)
T PRK07063 165 LLGLTRALGIEYAARNVRVNAIAP 188 (260)
T ss_pred HHHHHHHHHHHhCccCeEEEEEee
Confidence 889999999998654444444443
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.72 Score=51.01 Aligned_cols=151 Identities=9% Similarity=0.036 Sum_probs=92.8
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc-------cccCC--CccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK-------ISPND--TVHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~-------~~~~~--~~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
..+++||.....+++.+++++|.+.+. ++.+....... ..... -..+..+-.++++...+++.+.+..+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 456889989999999999999988775 44443321111 11111 123677888999999999999988888
Q ss_pred cCEEEEeCCCCCccc-------------ccChHHHHHHHHHHHhC---CCCceEEEEEcccccccC---CccchhhhHHH
Q psy616 97 IDSVFYLWPLEDKNC-------------IYNIMPIIYFLQAVKKS---KLYLRKLIISGISINKKN---EEDLYYCYFNS 157 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~-------------~~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~ 157 (1152)
+|.|||......... .-++.+.+.++|++... ....++++++........ ....+....++
T Consensus 87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa 166 (254)
T PRK06114 87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAG 166 (254)
T ss_pred CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHH
Confidence 999999987532111 12345566676764321 112344555432211111 12334445567
Q ss_pred HHHHHHHHHHHcCC--CcEEEE
Q psy616 158 WVAFERSLHIIMPE--TQISIV 177 (1152)
Q Consensus 158 ~~g~~r~~~~e~p~--~~~~~v 177 (1152)
+.+++|+++.|+.. +++..|
T Consensus 167 ~~~l~~~la~e~~~~gi~v~~v 188 (254)
T PRK06114 167 VIHLSKSLAMEWVGRGIRVNSI 188 (254)
T ss_pred HHHHHHHHHHHHhhcCeEEEEE
Confidence 88999999999864 444444
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.091 Score=55.44 Aligned_cols=144 Identities=22% Similarity=0.312 Sum_probs=93.9
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~G-a~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
...+|||||.|-+|..+|..|-.+. ...|||..-..+.+... ..| -|+-.|+-|...+++++-. .+|
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~----~~G---PyIy~DILD~K~L~eIVVn-----~RI 111 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT----DVG---PYIYLDILDQKSLEEIVVN-----KRI 111 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc----ccC---CchhhhhhccccHHHhhcc-----ccc
Confidence 4579999999999999999998874 44555533222222211 123 3677899998888776532 389
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF---------- 384 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~---------- 384 (1152)
|-+||....... + -+...--..++|+.|..|+.+.... .++. |++-|.-|.+|..
T Consensus 112 dWL~HfSALLSA---v---GE~NVpLA~~VNI~GvHNil~vAa~-------~kL~--iFVPSTIGAFGPtSPRNPTPdlt 176 (366)
T KOG2774|consen 112 DWLVHFSALLSA---V---GETNVPLALQVNIRGVHNILQVAAK-------HKLK--VFVPSTIGAFGPTSPRNPTPDLT 176 (366)
T ss_pred ceeeeHHHHHHH---h---cccCCceeeeecchhhhHHHHHHHH-------cCee--EeecccccccCCCCCCCCCCCee
Confidence 999997655431 1 1111222567899999999988543 3443 4445555555532
Q ss_pred ---CChhhhHHHHHHHHHHHHHHhc
Q psy616 385 ---GSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 385 ---g~~~Yaaana~l~~la~~~~~~ 406 (1152)
-..-|+.+|---+-+.++...+
T Consensus 177 IQRPRTIYGVSKVHAEL~GEy~~hr 201 (366)
T KOG2774|consen 177 IQRPRTIYGVSKVHAELLGEYFNHR 201 (366)
T ss_pred eecCceeechhHHHHHHHHHHHHhh
Confidence 1356999998888888887654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.42 Score=52.84 Aligned_cols=150 Identities=9% Similarity=0.037 Sum_probs=92.2
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------cC--CCccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------PN--DTVHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~~--~~~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
.++++||.....+++.+++++|.+.|. |+.+... ..... .. .-..+..+..++++..++++++.+..+.
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARH-LDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 457788988899999999999988775 4444332 11110 00 1123667888999999999999888888
Q ss_pred cCEEEEeCCCCCccc-------------ccChHHHHHHHHHHHh----CCCCceEEEEEcccccc---cCCccchhhhHH
Q psy616 97 IDSVFYLWPLEDKNC-------------IYNIMPIIYFLQAVKK----SKLYLRKLIISGISINK---KNEEDLYYCYFN 156 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~-------------~~~~~~l~~l~qal~~----~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~ 156 (1152)
+|.+||..+...... ..++.+.+.+++++.. .+....++.++...... ......+....+
T Consensus 87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKa 166 (253)
T PRK05867 87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKA 166 (253)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHH
Confidence 999999876522110 1234566777776532 22123344443321111 111123444456
Q ss_pred HHHHHHHHHHHHcC--CCcEEEE
Q psy616 157 SWVAFERSLHIIMP--ETQISIV 177 (1152)
Q Consensus 157 ~~~g~~r~~~~e~p--~~~~~~v 177 (1152)
++.+|+|+++.|+- ++++..|
T Consensus 167 al~~~~~~la~e~~~~gI~vn~i 189 (253)
T PRK05867 167 AVIHLTKAMAVELAPHKIRVNSV 189 (253)
T ss_pred HHHHHHHHHHHHHhHhCeEEEEe
Confidence 78899999999985 3555444
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.22 E-value=1 Score=49.88 Aligned_cols=154 Identities=11% Similarity=0.057 Sum_probs=95.2
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc----cccCC-C-ccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK----ISPND-T-VHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~----~~~~~-~-~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
.++++||.....+++.+++++|.+.|. |+.+....... ..... + ..+..+-.++++..++++.+.+..+.+|.
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 457889999999999999999988776 44443221111 00111 1 23678889999999999999888888999
Q ss_pred EEEeCCCCCcc-------------cccChHHHHHHHHHHHh----CCCCceEEEEEccccccc-CCccchhhhHHHHHHH
Q psy616 100 VFYLWPLEDKN-------------CIYNIMPIIYFLQAVKK----SKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAF 161 (1152)
Q Consensus 100 iv~lw~~~~~~-------------~~~~~~~l~~l~qal~~----~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~ 161 (1152)
+||........ ..-++.+.+.+.|++.. .+...+++.++....... .....+...-.++.+|
T Consensus 87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l 166 (251)
T PRK12481 87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGL 166 (251)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHH
Confidence 99987652211 11234567777777543 221234555543221111 1223344455678999
Q ss_pred HHHHHHHcCCCcEEEEEec
Q psy616 162 ERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 162 ~r~~~~e~p~~~~~~vd~~ 180 (1152)
+|+++.|+-...+++..+.
T Consensus 167 ~~~la~e~~~~girvn~v~ 185 (251)
T PRK12481 167 TRALATELSQYNINVNAIA 185 (251)
T ss_pred HHHHHHHHhhcCeEEEEEe
Confidence 9999999854334443333
|
|
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.26 Score=57.68 Aligned_cols=131 Identities=16% Similarity=0.120 Sum_probs=73.9
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC-
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG- 312 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G- 312 (1152)
.+.++++|+|++|++|+-+++.|.++|..+-.++++.+..+.... ..........+..|...+.+...-+ ....+
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~---~~~~~~ 152 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKL---VEAVPK 152 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhh---hhhccc
Confidence 456899999999999999999999999654444444333333322 1111112233444444443332222 22222
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD 383 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~ 383 (1152)
-..+++-++|--. ... ...+. ..+-..|+.++..++. .....+||++||+.+.-.+
T Consensus 153 ~~~~v~~~~ggrp-~~e-d~~~p------~~VD~~g~knlvdA~~-------~aGvk~~vlv~si~~~~~~ 208 (411)
T KOG1203|consen 153 GVVIVIKGAGGRP-EEE-DIVTP------EKVDYEGTKNLVDACK-------KAGVKRVVLVGSIGGTKFN 208 (411)
T ss_pred cceeEEecccCCC-Ccc-cCCCc------ceecHHHHHHHHHHHH-------HhCCceEEEEEeecCcccC
Confidence 2456666666543 221 11112 2345568888888852 2366789999998775544
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.16 Score=55.92 Aligned_cols=188 Identities=20% Similarity=0.182 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCccc---cccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMA---INTA 794 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~t---vdta 794 (1152)
-.-+..++..+||++++|.+++++ -|+.-+++|- ..-.+=.||...|||.--.-. ---+
T Consensus 76 a~~l~v~a~r~aL~~~~l~pedId----~vv~vtsTG~--------------~~Ps~dari~~~Lgl~p~~~Rvpv~glG 137 (356)
T COG3424 76 AVPLGVDALRRALDGSPLRPEDID----AVVTVTSTGL--------------ATPSLDARIVGELGLSPDTRRVPVWGLG 137 (356)
T ss_pred HHHHHHHHHHHHhccCCCCHHHCc----EEEEEeeccc--------------cCCChhHHHHhhcCCCCccceeeeecch
Confidence 446788999999999999988876 4444444331 111233466677777542221 2359
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCC-Cc----ccccccEEEEEcc
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN-GL----VPSEAVVAVVLKR 869 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~-G~----v~gEG~~~vvLk~ 869 (1152)
|+.+..++..|.+..|..--..++|..++++.-- + +|..+-+ .+ .+|+|++++|+.-
T Consensus 138 Caaga~glara~~y~ra~P~~~vlvV~vELCSLt--~----------------~~~d~t~s~lVgtaLF~DG~AA~vv~g 199 (356)
T COG3424 138 CAAGAAGLARARDYCRAAPDANVLVVCVELCSLT--Y----------------VFADDTKSNLVGTALFGDGAAAVVVSG 199 (356)
T ss_pred hhhhhhHHHHHHHHHhhCccceEEEEEeeeeeee--e----------------ecCCCCcccceeeeeecCCeeEEEEec
Confidence 9999999999999999999999999999984321 1 1111111 22 3688999988864
Q ss_pred cchhhc---CCCceEE----------EEEEEEEecCCCCCCC--CCCCH--HHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 870 LSRALS---DGDPIHA----------IIRGSGINYDGKTNGI--TAPNG--ISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 870 l~~A~~---dgd~i~a----------vI~g~a~~~dG~~~~~--~~P~~--~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
-..+.. .+-.|+. -+-|+.++++|...-+ .-|+- ......+...|..-|++-+||+.+-+|=-
T Consensus 200 d~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPG 279 (356)
T COG3424 200 DRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPG 279 (356)
T ss_pred cccccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCC
Confidence 222111 0111110 1346677777754322 22332 23456778899999999999999999977
Q ss_pred CCCCCCHHH
Q psy616 933 GTKLGDPVE 941 (1152)
Q Consensus 933 gT~~gD~~E 941 (1152)
|-++-|.+|
T Consensus 280 G~KVida~~ 288 (356)
T COG3424 280 GPKVIDAYE 288 (356)
T ss_pred CchHHHHHH
Confidence 777655554
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.18 E-value=1.4 Score=48.71 Aligned_cols=141 Identities=11% Similarity=0.048 Sum_probs=86.4
Q ss_pred ceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcc--c----ccc--CCCccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 29 NNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNI--K----ISP--NDTVHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 29 ~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~--~----~~~--~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
+++||.....+++..+++.|.++|. ++.+...... . +.. ..-..+..+..++++..++++++.+..+.+|.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 4688989999999999999988776 4444332110 0 000 11113667888999999999999888888999
Q ss_pred EEEeCCCCCc-----c--------cccChHHHHHHHHHHHh----CCCCceEEEEEccccccc-CCccchhhhHHHHHHH
Q psy616 100 VFYLWPLEDK-----N--------CIYNIMPIIYFLQAVKK----SKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAF 161 (1152)
Q Consensus 100 iv~lw~~~~~-----~--------~~~~~~~l~~l~qal~~----~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~ 161 (1152)
|||+.+.... . ...++.+.+.++|++.. ......++.++....... .....+....+++.+|
T Consensus 82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~ 161 (252)
T PRK07677 82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAM 161 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHH
Confidence 9999864211 0 11123566777887632 222334454543321111 1111223344667899
Q ss_pred HHHHHHHc
Q psy616 162 ERSLHIIM 169 (1152)
Q Consensus 162 ~r~~~~e~ 169 (1152)
+|+++.|+
T Consensus 162 ~~~la~e~ 169 (252)
T PRK07677 162 TRTLAVEW 169 (252)
T ss_pred HHHHHHHh
Confidence 99999997
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.12 E-value=1.5 Score=48.24 Aligned_cols=153 Identities=5% Similarity=0.014 Sum_probs=92.4
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP 105 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~ 105 (1152)
..+++||....++++..++++|.+.+. ++.+.... .......-..+..+..++++..++++.+.+..+.+|.|||...
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag 85 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAG 85 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 346788888889999999999987765 44444332 1111111224777888999999999999988888999999876
Q ss_pred CCCccc-------------ccChHHHHHHHHHHHhC---CCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHHHH
Q psy616 106 LEDKNC-------------IYNIMPIIYFLQAVKKS---KLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLHII 168 (1152)
Q Consensus 106 ~~~~~~-------------~~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~~e 168 (1152)
...... ..++.+.+.++|++... ....+++.++....... .....+.....++.++.++++.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e 165 (252)
T PRK08220 86 ILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLE 165 (252)
T ss_pred cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 522111 11245667777775321 11234444443222111 11222334445678899999999
Q ss_pred cCCCcEEEEEec
Q psy616 169 MPETQISIVFAE 180 (1152)
Q Consensus 169 ~p~~~~~~vd~~ 180 (1152)
+....+++..+.
T Consensus 166 ~~~~~i~v~~i~ 177 (252)
T PRK08220 166 LAPYGVRCNVVS 177 (252)
T ss_pred hhHhCeEEEEEe
Confidence 754444443333
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.08 E-value=1.4 Score=48.22 Aligned_cols=153 Identities=8% Similarity=0.067 Sum_probs=92.7
Q ss_pred CceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----c-CCC-ccEEEcCCChhhHHHHHHHHHhcCCCcCEE
Q psy616 28 KNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----P-NDT-VHYKINKDNINDYTFILNKIYEKDKKIDSV 100 (1152)
Q Consensus 28 ~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----~-~~~-~~~~i~p~~~~d~~~l~~~l~~~~~~~~~i 100 (1152)
++++||.....+++..++++|.+.+. ++.+.... .... . ... ..+..+..+.++...+++.+.+..+.+|.|
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDP-ASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCH-HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46789999999999999999988775 44443321 1111 0 111 236678889999999999998888889999
Q ss_pred EEeCCCCCccc-------------ccChHHHHHHHHHHHhC-CCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHH
Q psy616 101 FYLWPLEDKNC-------------IYNIMPIIYFLQAVKKS-KLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSL 165 (1152)
Q Consensus 101 v~lw~~~~~~~-------------~~~~~~l~~l~qal~~~-~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~ 165 (1152)
||+-....... ..++.+.+.+++++... ....++++++....... .....+.....++.++++++
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~l 164 (249)
T PRK06500 85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTL 164 (249)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHH
Confidence 99865422111 11345677888886532 11234444443221111 12222333345678899999
Q ss_pred HHHcCCCcEEEEEecC
Q psy616 166 HIIMPETQISIVFAEK 181 (1152)
Q Consensus 166 ~~e~p~~~~~~vd~~~ 181 (1152)
+.|+....+++..+.+
T Consensus 165 a~e~~~~gi~v~~i~p 180 (249)
T PRK06500 165 SGELLPRGIRVNAVSP 180 (249)
T ss_pred HHHhhhcCeEEEEEee
Confidence 9988644444444433
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.07 E-value=1.1 Score=50.98 Aligned_cols=152 Identities=5% Similarity=0.050 Sum_probs=92.1
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------c-C-CCccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------P-N-DTVHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~-~-~~~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
...++||....++++.+++++|.+++. |+.+.... .... . . .-..+..+-.++++..++++.+.+..+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~-~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARRE-DLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 557889999999999999999987765 54444331 1100 0 0 1124667788999999999999888888
Q ss_pred cCEEEEeCCCCCccc---------------ccChHHHHHHHHHHH----hCCCCceEEEEEcccccc--cCCccchhhhH
Q psy616 97 IDSVFYLWPLEDKNC---------------IYNIMPIIYFLQAVK----KSKLYLRKLIISGISINK--KNEEDLYYCYF 155 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~---------------~~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~ 155 (1152)
+|.|||..+...... .-++.+.+.+++++. ..+ ..+++.++..+... ......+....
T Consensus 118 id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~p~~~~Y~asK 196 (293)
T PRK05866 118 VDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEASPLFSVYNASK 196 (293)
T ss_pred CCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCCcchHHHHH
Confidence 999999876421100 012455666676643 222 23444444321111 11112233444
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEec
Q psy616 156 NSWVAFERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 156 ~~~~g~~r~~~~e~p~~~~~~vd~~ 180 (1152)
+++.+|+++++.|+.+..+++..+.
T Consensus 197 aal~~l~~~la~e~~~~gI~v~~v~ 221 (293)
T PRK05866 197 AALSAVSRVIETEWGDRGVHSTTLY 221 (293)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEE
Confidence 6678899999999865444444443
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.06 E-value=1.3 Score=49.03 Aligned_cols=151 Identities=9% Similarity=0.058 Sum_probs=91.4
Q ss_pred CCceEEEEecC--chhHHHHHHHHccCCc-EEEEecCCc--cccc---cCCCccEEEcCCChhhHHHHHHHHHhcCCCcC
Q psy616 27 KKNNLLCFSSN--KDFQNKIVESISSYTD-IIFIEQSDN--IKIS---PNDTVHYKINKDNINDYTFILNKIYEKDKKID 98 (1152)
Q Consensus 27 ~~~~~lvf~d~--~~~~~~l~~~l~~~~~-~~~v~~~~~--~~~~---~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~ 98 (1152)
.++++||.... .+++.+++++|.+.|. |+.+...+. .... ...-..|..+-.++++.+++++.+.+..+.+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35667777766 6999999999987775 444422210 0011 11112477888899999999999998888899
Q ss_pred EEEEeCCCCCc---------cc--------ccChHHHHHHHHHHHhCCC-CceEEEEEccccccc-CCccchhhhHHHHH
Q psy616 99 SVFYLWPLEDK---------NC--------IYNIMPIIYFLQAVKKSKL-YLRKLIISGISINKK-NEEDLYYCYFNSWV 159 (1152)
Q Consensus 99 ~iv~lw~~~~~---------~~--------~~~~~~l~~l~qal~~~~~-~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~ 159 (1152)
.+||....... .. .-++.+.++++|++...-. ..+++.++....... .....+...-+++.
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~ 165 (252)
T PRK06079 86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALE 165 (252)
T ss_pred EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHHHHHHH
Confidence 99997654211 00 1134567777877653221 234445543221111 12223344557789
Q ss_pred HHHHHHHHHcCCCcEEEE
Q psy616 160 AFERSLHIIMPETQISIV 177 (1152)
Q Consensus 160 g~~r~~~~e~p~~~~~~v 177 (1152)
+|.|+++.|+....+++.
T Consensus 166 ~l~~~la~el~~~gI~vn 183 (252)
T PRK06079 166 SSVRYLARDLGKKGIRVN 183 (252)
T ss_pred HHHHHHHHHhhhcCcEEE
Confidence 999999999865333333
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.00 E-value=1.4 Score=49.04 Aligned_cols=156 Identities=10% Similarity=0.097 Sum_probs=100.4
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCc------cccccCC---CccEEEcCCChhhHHHHHHHHHhcCC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDN------IKISPND---TVHYKINKDNINDYTFILNKIYEKDK 95 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~------~~~~~~~---~~~~~i~p~~~~d~~~l~~~l~~~~~ 95 (1152)
...++.||....+|++.+++++|.+++. ++.|..... ..+.... -..+.++-.++++...+.+++.+++.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 3567889999999999999999998876 555555421 0111100 11367777899999999999999999
Q ss_pred CcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHhC---CCCceEEEEEccc-ccccCCccchhhhHHHH
Q psy616 96 KIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKS---KLYLRKLIISGIS-INKKNEEDLYYCYFNSW 158 (1152)
Q Consensus 96 ~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~ 158 (1152)
.+|.+|..-+....... -++.++..|.+++... .....++-+...+ .........+.+.-+.+
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v 163 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFV 163 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHH
Confidence 99999998766221111 1346777777775432 1133444444322 22222334445555678
Q ss_pred HHHHHHHHHHcCCCcEEEEEecC
Q psy616 159 VAFERSLHIIMPETQISIVFAEK 181 (1152)
Q Consensus 159 ~g~~r~~~~e~p~~~~~~vd~~~ 181 (1152)
.+|..+|+.|+++.-+++--+.|
T Consensus 164 ~~fSeaL~~EL~~~gV~V~~v~P 186 (265)
T COG0300 164 LSFSEALREELKGTGVKVTAVCP 186 (265)
T ss_pred HHHHHHHHHHhcCCCeEEEEEec
Confidence 99999999999975554444443
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.73 Score=50.64 Aligned_cols=154 Identities=12% Similarity=0.026 Sum_probs=91.9
Q ss_pred CceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc-------ccc--CCCccEEEcCCChhhHHHHHHHHHhcCCCc
Q psy616 28 KNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK-------ISP--NDTVHYKINKDNINDYTFILNKIYEKDKKI 97 (1152)
Q Consensus 28 ~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~-------~~~--~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~ 97 (1152)
.+++||+....+++..++++|.+.+. ++.+....... ... ..-..+..+-.++++..++++++.+..+.+
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL 83 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 36799999999999999999988775 44322211111 000 011236677889999999999998888889
Q ss_pred CEEEEeCCCCCccc-------------ccChHHHHHHHHHHHhCC---CCceEEEEEcccc-cccCCccchhhhHHHHHH
Q psy616 98 DSVFYLWPLEDKNC-------------IYNIMPIIYFLQAVKKSK---LYLRKLIISGISI-NKKNEEDLYYCYFNSWVA 160 (1152)
Q Consensus 98 ~~iv~lw~~~~~~~-------------~~~~~~l~~l~qal~~~~---~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~g 160 (1152)
|.|||..+...... ..++.+.+.+++++.... ...++++++.... ........+.....++.+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~ 163 (250)
T PRK08063 84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEA 163 (250)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHH
Confidence 99999876422111 123345667777654321 1234444443211 111122223334456778
Q ss_pred HHHHHHHHcCCCcEEEEEecC
Q psy616 161 FERSLHIIMPETQISIVFAEK 181 (1152)
Q Consensus 161 ~~r~~~~e~p~~~~~~vd~~~ 181 (1152)
+.++++.|++...+++..+.+
T Consensus 164 ~~~~~~~~~~~~~i~v~~i~p 184 (250)
T PRK08063 164 LTRYLAVELAPKGIAVNAVSG 184 (250)
T ss_pred HHHHHHHHHhHhCeEEEeEec
Confidence 899999998655555554443
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.18 Score=53.07 Aligned_cols=69 Identities=14% Similarity=0.288 Sum_probs=42.8
Q ss_pred CCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEEEccc
Q psy616 243 GGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAG 322 (1152)
Q Consensus 243 Gg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvIh~AG 322 (1152)
-.+|-.|.++|+.+..+|+.+.++.+...... ...+. ..++.+.+++.+.+.+.... -|.+||+|.
T Consensus 26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~---------p~~~~--~i~v~sa~em~~~~~~~~~~---~Di~I~aAA 91 (185)
T PF04127_consen 26 RSSGKMGAALAEEAARRGAEVTLIHGPSSLPP---------PPGVK--VIRVESAEEMLEAVKELLPS---ADIIIMAAA 91 (185)
T ss_dssp S--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEE--EEE-SSHHHHHHHHHHHGGG---GSEEEE-SB
T ss_pred CCcCHHHHHHHHHHHHCCCEEEEEecCccccc---------cccce--EEEecchhhhhhhhccccCc---ceeEEEecc
Confidence 35678999999999999998777777653211 12243 34567777877777765443 499999999
Q ss_pred ccC
Q psy616 323 ISG 325 (1152)
Q Consensus 323 ~~~ 325 (1152)
+..
T Consensus 92 VsD 94 (185)
T PF04127_consen 92 VSD 94 (185)
T ss_dssp --S
T ss_pred hhh
Confidence 876
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.98 E-value=1.2 Score=50.50 Aligned_cols=154 Identities=10% Similarity=-0.016 Sum_probs=93.5
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc-------ccc-CCC-ccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK-------ISP-NDT-VHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~-------~~~-~~~-~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
...++||.....+++..++++|.+.+. ++.+....... ... ..+ ..+..+..+.++...+++++.+....
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 456789989999999999999987765 55544331110 000 011 13567788999999999999888888
Q ss_pred cCEEEEeCCCCCc--------------ccccChHHHHHHHHHHHhCC-CCceEEEEEccccccc-CCccchhhhHHHHHH
Q psy616 97 IDSVFYLWPLEDK--------------NCIYNIMPIIYFLQAVKKSK-LYLRKLIISGISINKK-NEEDLYYCYFNSWVA 160 (1152)
Q Consensus 97 ~~~iv~lw~~~~~--------------~~~~~~~~l~~l~qal~~~~-~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g 160 (1152)
+|.|||....... ....++.+.+.+++++...- ...+++++++...... .....+.....++.+
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~ 204 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHA 204 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHHHH
Confidence 9999998765211 01123467778888765421 1234444443222111 111223444456789
Q ss_pred HHHHHHHHcCCCcEEEEEec
Q psy616 161 FERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 161 ~~r~~~~e~p~~~~~~vd~~ 180 (1152)
++|+++.|+....+++..+.
T Consensus 205 l~~~la~~~~~~gIrv~~i~ 224 (290)
T PRK06701 205 FTRSLAQSLVQKGIRVNAVA 224 (290)
T ss_pred HHHHHHHHhhhcCeEEEEEe
Confidence 99999999864334444333
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.97 E-value=1.2 Score=49.23 Aligned_cols=154 Identities=11% Similarity=0.054 Sum_probs=95.0
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcc-c----ccc-CCC-ccEEEcCCChhhHHHHHHHHHhcCCCcC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNI-K----ISP-NDT-VHYKINKDNINDYTFILNKIYEKDKKID 98 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~-~----~~~-~~~-~~~~i~p~~~~d~~~l~~~l~~~~~~~~ 98 (1152)
..+++||.....+++..++++|.+.|. ++.+...+.. . ... ... ..+..+-.+.++..++++.+.+..+.+|
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id 93 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKID 93 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 567899999999999999999987775 4444333110 1 111 111 2477888899999999999998888899
Q ss_pred EEEEeCCCCCcc-------------cccChHHHHHHHHHHHhC---CCCceEEEEEccccccc-CCccchhhhHHHHHHH
Q psy616 99 SVFYLWPLEDKN-------------CIYNIMPIIYFLQAVKKS---KLYLRKLIISGISINKK-NEEDLYYCYFNSWVAF 161 (1152)
Q Consensus 99 ~iv~lw~~~~~~-------------~~~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~ 161 (1152)
.|||..+..... ...++.+.+.++|++... ....+++.++....... ...+.+.....++.++
T Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 173 (258)
T PRK06935 94 ILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGL 173 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHH
Confidence 999988652211 011345667777765421 11334555544322111 1122334444667899
Q ss_pred HHHHHHHcCCCcEEEEEec
Q psy616 162 ERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 162 ~r~~~~e~p~~~~~~vd~~ 180 (1152)
.|+++.|+....+++..+.
T Consensus 174 ~~~la~e~~~~gi~v~~i~ 192 (258)
T PRK06935 174 TKAFANELAAYNIQVNAIA 192 (258)
T ss_pred HHHHHHHhhhhCeEEEEEE
Confidence 9999999865444443333
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.72 Score=50.91 Aligned_cols=150 Identities=9% Similarity=0.025 Sum_probs=91.0
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc-----cccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK-----ISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSV 100 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~-----~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~i 100 (1152)
..+++||.....+++..++++|.+++. |+.+....... .....-..+..+-.++++...+++.+.+....+|.|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v 93 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL 93 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 456788988899999999999987775 44443321100 000011247778889999999999998887889999
Q ss_pred EEeCCCCCccc-------------ccChHHHHHHHHHHHhC---CCCceEEEEEcccccc-cCCccchhhhHHHHHHHHH
Q psy616 101 FYLWPLEDKNC-------------IYNIMPIIYFLQAVKKS---KLYLRKLIISGISINK-KNEEDLYYCYFNSWVAFER 163 (1152)
Q Consensus 101 v~lw~~~~~~~-------------~~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~g~~r 163 (1152)
||..+...... ..++.+.+.+++++... ....++++++...... ......+.....++.+++|
T Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 173 (255)
T PRK06841 94 VNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTK 173 (255)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHHH
Confidence 99987632111 11345666777765431 1133455554322111 1122223334466788999
Q ss_pred HHHHHcCCCcEEE
Q psy616 164 SLHIIMPETQISI 176 (1152)
Q Consensus 164 ~~~~e~p~~~~~~ 176 (1152)
+++.|+....+++
T Consensus 174 ~la~e~~~~gi~v 186 (255)
T PRK06841 174 VLALEWGPYGITV 186 (255)
T ss_pred HHHHHHHhhCeEE
Confidence 9999986433333
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1152 | ||||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 4e-81 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 7e-79 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 1e-63 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 1e-61 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 7e-24 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 8e-23 | ||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 4e-22 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 3e-20 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 9e-19 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 7e-18 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 1e-17 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 1e-16 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 2e-16 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 5e-16 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 8e-16 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 1e-14 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 1e-14 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 1e-14 | ||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 2e-14 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 2e-14 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 3e-14 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 5e-14 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 2e-13 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 6e-13 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 7e-13 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 1e-12 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 2e-12 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 3e-12 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 6e-12 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 7e-12 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 7e-12 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 8e-12 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 9e-12 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 9e-12 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 2e-11 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 2e-11 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 6e-11 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 7e-11 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 2e-10 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 3e-10 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 4e-10 | ||
| 3slk_A | 795 | Structure Of Ketoreductase And Enoylreductase Didom | 1e-05 | ||
| 3zen_D | 3089 | Cryo-em Structure Of The Mycobacterial Fatty Acid S | 7e-04 |
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795 | Back alignment and structure |
|
| >pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 495 bits (1277), Expect = e-158
Identities = 149/518 (28%), Positives = 247/518 (47%), Gaps = 63/518 (12%)
Query: 629 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKL-YYENPIKSSNKIN 687
+ E + I GMSG+ P + N+ EFW LI D++++ WK Y P
Sbjct: 2 TGEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDR---RWKAGLYGLP-------- 50
Query: 688 SKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGM 747
+ G + + FD FF + P +A MDP+ R LL+ ++ A+ D G P+ + G+
Sbjct: 51 -RRSGKLKDLSRFDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGV 109
Query: 748 FVGVEEGSNYQDRLDQV-------NLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLV 800
+VGV GS + L + ++ A+++ RL++F D +GP +A++TACSSSL+
Sbjct: 110 WVGVS-GSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLM 168
Query: 801 ATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSE 860
A A Q++ +C AI G+N+++ P + GMLSP+G C FD NG SE
Sbjct: 169 ALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSE 228
Query: 861 AVVAVVLKRLSRALSDGDPIHAIIRGSGINYDG-KTNGITAPNGISQTELIKSVYKKSNL 919
VVAV+L + S A ++A I +G N DG K G+T P+G Q +LI+S+Y+ + +
Sbjct: 229 GVVAVLLTKKSLA----RRVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGV 284
Query: 920 NPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQ---KFCAITSNKSNIGHTFAASG 976
PE YI HGTGTK+GDP E+N + + I S KSN+GH ASG
Sbjct: 285 APESFEYIEAHGTGTKVGDPQELNGITR-----ALCATRQEPLLIGSTKSNMGHPEPASG 339
Query: 977 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWN-----TVNEKL--- 1028
L +L ++ S+++ + +LH N I V++ L
Sbjct: 340 LAALAKVLLSLEHGLWAPNLHFHSPNPEI-------------PALLDGRLQVVDQPLPVR 386
Query: 1029 -RIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMK 1087
+++FG G+N HI+L+ + ++ S +T ++++ ++
Sbjct: 387 GGNVGINSFGFGGSNVHIILRPNTQP-----PPAPAPHATLPRLLRASGRTPEAVQKLLE 441
Query: 1088 QILLFLRKNNTVCIENFVYTLMQGRHHFQYRCAIIISS 1125
Q L + + + N + + +R ++
Sbjct: 442 QGLRHSQDLAFLSMLNDIAAV--PATAMPFRGYAVLGG 477
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 519 bits (1338), Expect = e-157
Identities = 149/506 (29%), Positives = 244/506 (48%), Gaps = 43/506 (8%)
Query: 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKL-YYENPIKSSNKINSK 689
E + I GMSG+ P + N+ EFW LI D+++ WK Y P +
Sbjct: 2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDR---RWKAGLYGLP---------R 49
Query: 690 WYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV 749
G + + FD FF + +A MDP+ R LL+ ++ A+ D G P + G++V
Sbjct: 50 RMGKLKDLSRFDASFFGVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWV 109
Query: 750 GVEEGSNYQDRLDQV-------NLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
GV S+ + L + ++ A+++ RL++F D KGP + I+TACSSSL+A
Sbjct: 110 GVS-SSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGPSITIDTACSSSLLAL 168
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 862
A Q++R EC A+ G+N+++ P + + GMLS DG C FD G +EAV
Sbjct: 169 QSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAV 228
Query: 863 VAVVLKRLSRALSDGDPIHAIIRGSGINYDG-KTNGITAPNGISQTELIKSVYKKSNLNP 921
VAV+L + S A ++A I +G N DG K G+T P+G Q +LI+S+Y + +P
Sbjct: 229 VAVLLTKKSLA----RRVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDP 284
Query: 922 EDINYIITHGTGTKLGDPVEINALHDVF-KNKTYNQKFCAITSNKSNIGHTFAASGLVSL 980
E + YI HGTGTK+GDP E+N + + + ++ I S KSN+GH ASG+ +L
Sbjct: 285 ESLEYIEAHGTGTKVGDPQELNGIVNALCATR---REPLLIGSTKSNMGHPEPASGVAAL 341
Query: 981 INLVQSIKYKIIPASLHCEKENNYI-ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMS 1039
I ++ S+++ + +LH N I L++ + +++FG
Sbjct: 342 IKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRG-----GNVGINSFGFG 396
Query: 1040 GTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTV 1099
G+N H++LQ + ++ S +T +++ ++Q L R V
Sbjct: 397 GSNVHVILQPNSRP-----APPPAQHAALPRLLQASGRTLEAVQTLLEQGLRHSRDLAFV 451
Query: 1100 CIENFVYTLMQGRHHFQYRCAIIISS 1125
+ N +R ++
Sbjct: 452 GMLN--EIAAVSPVAMPFRGYAVLGG 475
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 2e-16
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 29/173 (16%)
Query: 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN----SIIYKKLKKFNNKAIYIQ 291
+Y+ITGG G G+ + +L + + L+L+ RS + + ++ ++ + +
Sbjct: 1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVST 1943
Query: 292 VDVSDKL---KMISEINSIINNIGPIDGVLHIAG------ISGLTSNILEANYKNFYSVL 342
+ S +I+E +GP+ GV ++A + T + V
Sbjct: 1944 SNASSLDGARSLITEATQ----LGPVGGVFNLAMVLRDAVLENQTPEFFQD-------VS 1992
Query: 343 SSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395
K SGT L+ +L FV FSS S G+ G +Y N
Sbjct: 1993 KPKYSGTANLDRVTREACPELDY----FVI-FSSVSCGRGNAGQANYGFANSA 2040
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 482 bits (1243), Expect = e-154
Identities = 170/517 (32%), Positives = 280/517 (54%), Gaps = 41/517 (7%)
Query: 629 SEELIAIIGMSGRFP-AARNINEFWKILINNKDVISEIPEKIFD--WKLYYENPIKSSNK 685
+ E IAI+GM+ RFP + FW+ + D I+E P D W+ +P
Sbjct: 37 AGEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPA---DRGWEP---DP------ 84
Query: 686 INSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKI 745
+++ G + +FD FF ISP EA MDP+QR +L+ SW ALE AG+ P +
Sbjct: 85 -DARLGGMLAAAGDFDAGFFGISPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSAT 143
Query: 746 GMFVGVEEGSNYQDRLDQVN-------LTSTHNAILSARLAYFMDLKGPVMAINTACSSS 798
G+F GV +Y R D+ T T +++ S R+AY + L+GP M ++TACSS
Sbjct: 144 GVFTGVG-TVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGPAMTVDTACSSG 202
Query: 799 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVP 858
L A H+A +SLR+ EC A++ GV +M SP A+ S G L+ DG+C F + A+G
Sbjct: 203 LTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGL 262
Query: 859 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSN 918
+E +VL+RLS A +G P+ A++RGS +N DG +NG+TAP+G +Q +I+ + +
Sbjct: 263 AEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAG 322
Query: 919 LNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF-----CAITSNKSNIGHTFA 973
+ D++Y+ HGTGT+LGDP+E++AL TY + I S KSNIGHT A
Sbjct: 323 VRAGDVDYVEAHGTGTRLGDPIEVHALLS-----TYGAERDPDDPLWIGSVKSNIGHTQA 377
Query: 974 ASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV 1033
A+G+ ++ V ++++ +P +LH ++ + I + + W E+ R V
Sbjct: 378 AAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSW-PAGERPRRAGV 436
Query: 1034 SAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFL 1093
S+FG+SGTNAH++++E + +VLS + + +++ + ++ L
Sbjct: 437 SSFGISGTNAHVIVEEAPEA-----DEPEPAPDSGPVPLVLSGRDEQAMRAQAGRLADHL 491
Query: 1094 RKNNTVCIENFVYTLMQGRHHFQYRCAIIISSIEEVV 1130
+ + + +TL R +++R A+++ +E +
Sbjct: 492 AREPRNSLRDTGFTLATRRSAWEHR-AVVVGDRDEAL 527
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 479 bits (1235), Expect = e-153
Identities = 170/523 (32%), Positives = 270/523 (51%), Gaps = 41/523 (7%)
Query: 629 SEELIAIIGMSGRFP-AARNINEFWKILINNKDVISEIPEKIFD--W---KLYYENPIKS 682
+ IAI+ M+ R P W++L + +S P D W +L++ +P +
Sbjct: 4 ESDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPT---DRGWDLARLHHPDP-DN 59
Query: 683 SNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIAN 742
G + FD FF +SP EA MDP+QR LL+ SW +E+AG P+ +
Sbjct: 60 PGTSYVDKGGFLDDAAGFDAEFFGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRG 119
Query: 743 QKIGMFVGVEEGSNYQDRLDQVN------LTSTHNAILSARLAYFMDLKGPVMAINTACS 796
G+F+GV Y + +T A+ S R++Y M L+GP ++++TACS
Sbjct: 120 TATGVFLGVA-KFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEGPSISVDTACS 178
Query: 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGL 856
SSLVA H+A +SLR+ E A+ G +M +P ++ + L+ DG+ F A+G
Sbjct: 179 SSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGF 238
Query: 857 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKK 916
SE V V+L+RLS A +G + A++RGS +N DG +NG++AP+G +Q +I+ +
Sbjct: 239 GFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALES 298
Query: 917 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF-----CAITSNKSNIGHT 971
L P D++ + HGTGT LGDP+E NAL D TY + + S KSNIGHT
Sbjct: 299 CGLEPGDVDAVEAHGTGTALGDPIEANALLD-----TYGRDRDADRPLWLGSVKSNIGHT 353
Query: 972 FAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIG 1031
AA+G+ L+ +V +++ +PA+LH E+ ++ + + N+ W E+ R
Sbjct: 354 QAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPW-RRGERTRRA 412
Query: 1032 AVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILL 1091
AVSAFG+SGTNAH++++E T +V+SA++ +L+ + QI
Sbjct: 413 AVSAFGISGTNAHVIVEEAPERE----HRETTAHDGRPVPLVVSARSTAALRAQAAQIAE 468
Query: 1092 FLRKNNT----VCIENFVYTLMQGRHHFQYRCAIIISSIEEVV 1130
L + + V L R ++R A++ S+ EE V
Sbjct: 469 LLERPDADLAGVG-----LGLATTRARHEHRAAVVASTREEAV 506
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 6e-37
Identities = 90/453 (19%), Positives = 161/453 (35%), Gaps = 88/453 (19%)
Query: 635 IIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSI 694
I GM G +E L ++ + +P+ +D ++++ +
Sbjct: 10 ITGMGGVTALGSRWDEIEAALKAGRNAVRRMPD--WD----------YFESLHTRLAAPL 57
Query: 695 PGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPN-QIANQKIGMFVGVEE 753
PG F + M + ++ S LAL DAG+ + I++ ++G+ G
Sbjct: 58 PG---FAQPAD-WPRKKTRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSS 113
Query: 754 GS-----NYQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINT 793
GS + L+ + T+ + ++ F DLKG ++ ++
Sbjct: 114 GSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSL-------FWDLKGRIVPTSS 166
Query: 794 ACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAG---M--LS-----PD 843
AC+S A A +++ + ++ G E A + S P
Sbjct: 167 ACASGSQAIGYAYENIAMGKQTLMLAGGA------EELSGPAVAVFDTLYATSTRNDEPH 220
Query: 844 GKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNG 903
FD + +GLV E +VL+ A + G IHA I G G N DG +T P
Sbjct: 221 LTPRPFDAKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDG--AHMTQPTA 278
Query: 904 ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITS 963
+ ++ + + L+ I Y+ HGT T GD E A F + I+S
Sbjct: 279 STMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGERM------PISS 332
Query: 964 NKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE------KENNYIILKNSPFYINKS 1017
KS +GHT A G + ++ +K +L+ +YI ++
Sbjct: 333 LKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYI--------RGEA 384
Query: 1018 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050
+ F G N ++ +
Sbjct: 385 RAI------DAEYVMSNNFAFGGINTSLIFRRV 411
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 8e-37
Identities = 104/435 (23%), Positives = 170/435 (39%), Gaps = 65/435 (14%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P + ++W+ L+ ++ I I FD ++ ++ G + FD
Sbjct: 19 PIGNTLQDYWQGLMEGRNGIGPI--TRFD-----------ASDQACRFGGEVKD---FDA 62
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 753
F + EA+RMD + S A+ DA N++ +IG+ +G ++
Sbjct: 63 TQF-LDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQ 121
Query: 754 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
+ D+ + N+ S AI + KGP TAC++ A
Sbjct: 122 QTILLDKGPSRCSPFMIPMMIANMASGLTAI-------NLGAKGPNNCTVTACAAGSNAI 174
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 857
A + ++ I G I+P +Y SA LS P FD+ +G V
Sbjct: 175 GDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFV 234
Query: 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYK 915
E ++L+ L AL+ G I+ + G + D ITAP +G T I K
Sbjct: 235 MGEGSGILILEELESALARGAKIYGEMVGYAMTCDA--YHITAPVPDGRGATRAIAWALK 292
Query: 916 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 975
S L PE ++YI HGT T D E A+ N YN A++S KS GH S
Sbjct: 293 DSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYN---IAVSSTKSMTGHLLGGS 349
Query: 976 GLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSA 1035
G + + V +I +P +++ E + L P +S + + ++
Sbjct: 350 GGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP---GQSRAL------IVDVALSNS 400
Query: 1036 FGMSGTNAHIVLQEY 1050
FG G N + ++Y
Sbjct: 401 FGFGGHNVTLAFKKY 415
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 1e-36
Identities = 90/434 (20%), Positives = 169/434 (38%), Gaps = 64/434 (14%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P ++ W+ + + I +I D + + G + F+
Sbjct: 40 PIGNDVKTTWENALKGVNGIDKI--TRID-----------TEPYSVHLAGELKN---FNI 83
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 753
I EA RMD ++ + + A++DA N+ +IG+++G
Sbjct: 84 EDH-IDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIA 142
Query: 754 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
D+ + ++ + +I + KGP A TAC++ +
Sbjct: 143 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSI-------DLGAKGPNGATVTACATGTNSI 195
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERANGLVP 858
A + +++ + D I+ G I+ A +++ LS + C F E +G V
Sbjct: 196 GEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVM 255
Query: 859 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKK 916
E +V++ L A + G I+A I G G D ITAP G + +++
Sbjct: 256 GEGAGILVIESLESAQARGANIYAEIVGYGTTGDA--YHITAPAPEGEGGSRAMQAAMDD 313
Query: 917 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASG 976
+ + P+D+ Y+ HGT T +GD E+ A+ + F + ++S KS GH A+G
Sbjct: 314 AGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKH---LKVSSTKSMTGHLLGATG 370
Query: 977 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAF 1036
+ I SIK + ++H + L P N++ + ++
Sbjct: 371 GIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP---NEAQDL------DITYAMSNSL 421
Query: 1037 GMSGTNAHIVLQEY 1050
G G NA +V +++
Sbjct: 422 GFGGHNAVLVFKKF 435
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 2e-36
Identities = 73/440 (16%), Positives = 145/440 (32%), Gaps = 81/440 (18%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P + +W +++ + + + FD ++ + G I F
Sbjct: 21 PNGLGLAPYWSAVLDGRHGLGPV--TRFD-----------VSRYPATLAGQIDD---FHA 64
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV-----GVEEGSNY 757
I + DP R L + AL+DA P + + +G+ G +
Sbjct: 65 PDH-IPGRLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHRE 123
Query: 758 QDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
+L + + +I ++GP A+ +
Sbjct: 124 FRKLWSEGPKSVSVYESFAWFYAVNTGQISI-------RHGMRGPSSALVAEQAGG---L 173
Query: 803 HIACQSLR--QHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERANGL 856
+ R + +S GV+ + P +++ ++G +S PD FDERA G
Sbjct: 174 DALGHARRTIRRGTPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERAAGY 233
Query: 857 VPSEAVVAVVLKRLSRALSDG-DPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYK 915
VP E +VL+ + A + G + + G +D + I+
Sbjct: 234 VPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDP--APGSGR-PAGLERAIRLALN 290
Query: 916 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 975
+ PED++ + G G D E A+ VF + +T K+ G ++
Sbjct: 291 DAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGV-----PVTVPKTTTGRLYSGG 345
Query: 976 GLVSLINLVQSIKYKIIPASLHCEKEN-----NYIILKNSPFYINKSNKKWNTVNEKLRI 1030
G + ++ + S++ +I + + ++ + R
Sbjct: 346 GPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVL--------GEPRST------APRT 391
Query: 1031 GAVSAFGMSGTNAHIVLQEY 1050
V A G G N+ VL+ +
Sbjct: 392 ALVLARGRWGFNSAAVLRRF 411
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-36
Identities = 91/434 (20%), Positives = 169/434 (38%), Gaps = 64/434 (14%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P + W+ + ++++ + + K + FD
Sbjct: 16 PIGNDAETSWENAKKGVNGVAKM--TRLN-----------PDDFPVKIAAELKD---FDV 59
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 753
+ + EA +MD + + + +A++D+G + ++G+++G +
Sbjct: 60 EKY-LEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQ 118
Query: 754 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
+ +R + ++ S +I KG TAC+++ +
Sbjct: 119 YEIFLNRGHRRVSPFFVPMMIPDMGSGQVSI-------RFGAKGINSTTVTACATATNSI 171
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERANGLVP 858
A + + + + D I+ G I+ + T+ LS P+ C FD+ +G +
Sbjct: 172 GDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDRDGFII 231
Query: 859 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKK 916
E V+L+ A + G I+A I G G D ITAP NG +K
Sbjct: 232 GEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDA--YHITAPAPNGEGAARAMKMAIDD 289
Query: 917 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASG 976
+ L P+ ++YI HGT T D E A+ VF AI+S KS GHT ASG
Sbjct: 290 AGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKK---LAISSTKSMTGHTLGASG 346
Query: 977 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAF 1036
+ I + +I+ II ++H + ++ L P N++ + + + ++F
Sbjct: 347 GIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVP---NEAREA------NVNVVISNSF 397
Query: 1037 GMSGTNAHIVLQEY 1050
G G NA +V +
Sbjct: 398 GFGGHNATLVFKRI 411
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 2e-35
Identities = 87/450 (19%), Positives = 168/450 (37%), Gaps = 69/450 (15%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
+ I G+ R P +FW++L + + I FD + S+
Sbjct: 5 VVITGVGVRAPGGNGTRQFWELLTSGRTATRRI--SFFD-----------PSPYRSQVAA 51
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV- 751
D P E +RMD + + + A +G P+ + ++G+ +G
Sbjct: 52 EA---DFDPVAEG-FGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSA 107
Query: 752 --------EEGSNYQDRLDQVNLTSTH-----------NAILSARLAYFMDLKGPVMAIN 792
E D + + + ++ A +A+ + +GPV ++
Sbjct: 108 VAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPS-VMPAEVAWAVGAEGPVTMVS 166
Query: 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCY 847
T C+S L + A +++ + D + + I+P + + P+
Sbjct: 167 TGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASR 226
Query: 848 VFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGIS 905
FD +G V +E VL+ AL+ G IHA I G + +T +G
Sbjct: 227 PFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNA--YHMTGLKADGRE 284
Query: 906 QTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNK 965
E I+ +S + DI+YI HG+GT+ D E A ++S K
Sbjct: 285 MAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARR---TPVSSIK 341
Query: 966 SNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKEN-----NYIILKNSPFYINKSNKK 1020
S +GH+ A G + + V ++++ ++P + + + +Y+ P ++ ++
Sbjct: 342 SMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYV-----P---LEARER 393
Query: 1021 WNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050
KLR G G + +VL++
Sbjct: 394 ------KLRSVLTVGSGFGGFQSAMVLRDA 417
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 4e-35
Identities = 99/433 (22%), Positives = 168/433 (38%), Gaps = 67/433 (15%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P F K + K + I FD ++ + + + DP
Sbjct: 14 PIGVGQEAFHKAQLAGKSGVRPI--TRFD-----------ASALPVRIAAEVD----VDP 56
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 753
+ + E R+D ++ L + LALEDAG P + +++G VG +
Sbjct: 57 GAY-LDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQ 115
Query: 754 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
+ +R + N+ S H A+ GP + TAC++ A
Sbjct: 116 SRVFLERGPNRISPFFIPMMIANMASAHIAM-------RYGFTGPSSTVVTACATGADAL 168
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 857
A + ++ E D ++ G I+P A A LS P+ F +G V
Sbjct: 169 GSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFV 228
Query: 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYK 915
E +VL+ A G I+A + G G + D + IT P G + K
Sbjct: 229 MGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADA--HHITEPHPEGKGAALAMARALK 286
Query: 916 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 975
+ + PE + YI HGT T +GD E+ A+ VF + ++S KS IGH A+
Sbjct: 287 DAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKR---LMVSSTKSMIGHLLGAA 343
Query: 976 GLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSA 1035
G V I VQ++ + +IP +++ E + + L ++ + + K+ ++
Sbjct: 344 GAVEAIATVQALYHGVIPPTINLEDPDPELDLD----FVPEPREA------KVDYALSNS 393
Query: 1036 FGMSGTNAHIVLQ 1048
F G NA + +
Sbjct: 394 FAFGGHNAVLAFK 406
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 6e-35
Identities = 96/441 (21%), Positives = 174/441 (39%), Gaps = 61/441 (13%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFD---WKLYYENPIKSSNKINSKWYGSIP---G 696
P R + W+ LI+ + I + D E + + ++++SK +P
Sbjct: 13 PLGRGVETTWRRLIDGECGIRGLTL--DDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSN 70
Query: 697 IDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVG----- 750
EFD + L ++ + + + + AL DA + P + + + G+ +G
Sbjct: 71 PGEFDEALW----LNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGS 126
Query: 751 VEEGSNYQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTAC 795
+ + + + VN+ S H ++ +GP A TAC
Sbjct: 127 ICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSM-------KYGFQGPNHAAVTAC 179
Query: 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVF 849
++ + A + ++ + D ++ G I + + + LS P F
Sbjct: 180 ATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPF 239
Query: 850 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQT 907
D +G V E +VL+ A G I+A + G G++ D + IT P +G
Sbjct: 240 DCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDA--HHITQPPEDGKGAV 297
Query: 908 ELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSN 967
+ ++S L P I+Y+ H T T +GD VE A+ VF + A +S K
Sbjct: 298 LAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTL-AFSSTKGA 356
Query: 968 IGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEK 1027
GH A+G V I + +I + + P +L+ + + + P S K
Sbjct: 357 TGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPL--TTSKKM------L 408
Query: 1028 LRIGAVS-AFGMSGTNAHIVL 1047
+R A+S +FG GTNA ++
Sbjct: 409 VRT-AMSNSFGFGGTNASLLF 428
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 8e-35
Identities = 87/433 (20%), Positives = 167/433 (38%), Gaps = 64/433 (14%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P + WK L+ + IS I FD ++ +K+ G + F+
Sbjct: 30 PVGNTVESTWKALLAGQSGISLI--DHFD-----------TSAYATKFAGLVKD---FNC 73
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 753
IS E +MD ++ + A++D+G + +IG +G E
Sbjct: 74 EDI-ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEEN 132
Query: 754 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
++ + VN+ + H I L+GP ++I TA +S +
Sbjct: 133 HTSLMNGGPRKISPFFVPSTIVNMVAGHLTI-------MYGLRGPSISIATAATSGVHNI 185
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 857
A + + + D ++ G +P +A LS P +D+ +G V
Sbjct: 186 GHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFV 245
Query: 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYK 915
+ +VL+ A G I+A + G G++ D +T+P NG + + +
Sbjct: 246 LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDA--YHMTSPPENGAGAALAMANALR 303
Query: 916 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 975
+ + I Y+ HGT T GD E A+ +F ++S KS GH A+
Sbjct: 304 DAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSMTGHLLGAA 360
Query: 976 GLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSA 1035
G V I + +++ + +P +++ + + L P +++ + + ++
Sbjct: 361 GAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVP---HEARQV-----SGMEYTLCNS 412
Query: 1036 FGMSGTNAHIVLQ 1048
FG GTN ++ +
Sbjct: 413 FGFGGTNGSLIFK 425
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 3e-33
Identities = 99/442 (22%), Positives = 173/442 (39%), Gaps = 74/442 (16%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGID---E 699
P + W LI + I + ++K +P +
Sbjct: 33 PLGVGTHLVWDRLIGGESGIVSLVG--EEYKSI-----------PCSVAAYVPRGSDEGQ 79
Query: 700 FDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVG-----VEE 753
F+ F +S + + M + + LA++D+G+ P A+Q G+ +G +E
Sbjct: 80 FNEQNF-VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEV 138
Query: 754 GSNYQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSS 798
S VN+ + +I LKGP A++TAC++
Sbjct: 139 VSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSI-------RYKLKGPNHAVSTACTTG 191
Query: 799 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERAN 854
A + + + + D ++ G + ISP + + A LS P C F + +
Sbjct: 192 AHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPKRD 251
Query: 855 GLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKS 912
G V E +VL+ A+ I+A + G G++ D ITAP G + +
Sbjct: 252 GFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDA--GHITAPDPEGEGALRCMAA 309
Query: 913 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 972
K + + PE+I+YI H T T LGD E A+ +FK+ Y A++S K GH
Sbjct: 310 ALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYA---LAVSSTKGATGHLL 366
Query: 973 AASGLVSLINLVQSIKYKIIPASLHCEKEN-----NYIILKNSPFYINKSNKKWNTVNEK 1027
A+G V + Y+ +P +L+ + NY+ P K+ + ++
Sbjct: 367 GAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYV-----P---LKAQEW--KTEKR 416
Query: 1028 LRIGAVS-AFGMSGTNAHIVLQ 1048
++ +FG GTNA + +
Sbjct: 417 FI--GLTNSFGFGGTNATLCIA 436
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 3e-33
Identities = 59/424 (13%), Positives = 121/424 (28%), Gaps = 105/424 (24%)
Query: 692 GSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMF-VG 750
G IP ++ + IS ++DP +L A +G + + + VG
Sbjct: 988 GQIP--TGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVG 1045
Query: 751 VEEGS----------NYQDRLDQ-------------VNLTSTHNAILSARLAYFMDLKGP 787
GS ++DR +++ N +L + GP
Sbjct: 1046 NCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL-------ISSSGP 1098
Query: 788 VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAG---M--LS- 841
+ AC++S+ + I +++ + I G + + S M S
Sbjct: 1099 IKTPVGACATSVESVDIGVETILSGKARICIVGGY------DDFQEEGSFEFGNMKATSN 1152
Query: 842 ----------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINY 891
P NG + ++ ++ + AL G PI+ I+ +
Sbjct: 1153 TLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATAT 1212
Query: 892 DGKTNGITAP---NGISQT------------ELIKSVYKKSNLN----------PEDINY 926
D G + P GI T + Y+K L ++
Sbjct: 1213 DK--IGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEA 1270
Query: 927 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQS 986
+ D E +N+ + + + G+ F +
Sbjct: 1271 LKLEAEEIPSEDQNEFLLERTRE---IHNEAESQLRAAQQQWGNDFYKRD-----PRIAP 1322
Query: 987 IKYKIIPASLHCEKENNYIILKNSPFYINK--SNKKWNTVNEKLRIGAVSAFG-MSGTNA 1043
++ + L + + ++ K N NE I + + +
Sbjct: 1323 LRGALATYGLTIDDLG----------VASFHGTSTKANDKNESATINEM--MKHLGRSEG 1370
Query: 1044 HIVL 1047
+ V+
Sbjct: 1371 NPVI 1374
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-23
Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 27/187 (14%)
Query: 877 GDPI-HAIIRGSGINYDGKTN--------GITAPNGISQTELIKSVYKKSNLNPEDINYI 927
D + R I+ + ++ G + ++ L +D+
Sbjct: 1281 EDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVA 1340
Query: 928 ITHGTGTKLGDPVEINALHDVFKNKTYNQ-KFCAITSNKSNIGHTFAASGLVSLINLVQS 986
HGT TK D E ++++ K+ ++ K GH A+G + +Q
Sbjct: 1341 SFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQI 1400
Query: 987 IKYKIIPASLHCE------KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSG 1040
+ IIP + + + ++ Y++ Y +K+ K + +R ++++FG
Sbjct: 1401 LNSGIIPGNRNADNVDKILEQFEYVL------YPSKTLKT-----DGVRAVSITSFGFGQ 1449
Query: 1041 TNAHIVL 1047
++
Sbjct: 1450 KGGQAIV 1456
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 7e-33
Identities = 91/434 (20%), Positives = 154/434 (35%), Gaps = 67/434 (15%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P EFW L K I I FD + + I F
Sbjct: 35 PIGNTPEEFWNSLATGKIGIGGI--TKFD-----------HSDFDVHNAAEIQD---FPF 78
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV---------EE 753
+ + R D + L + A+ A + + G+ V ++
Sbjct: 79 DKY-FVKKDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQ 137
Query: 754 GSNYQDR-----------LDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
++ N+ S + A+ G +INTACSSS A
Sbjct: 138 VLRLHEKGPKRVKPMTLPKALPNMASGNVAM-------RFGANGVCKSINTACSSSNDAI 190
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERANGLVP 858
A +S++ D + G I+P A + LS P FD+ NG V
Sbjct: 191 GDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFVM 250
Query: 859 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKK 916
E +VL+ L A G I A + G G D +T+P G + IK ++
Sbjct: 251 GEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDA--YHMTSPHPEGQGAIKAIKLALEE 308
Query: 917 SNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASG 976
+ ++PE + Y+ HGT T + E A+ V + ++S KS GH A+G
Sbjct: 309 AEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKEV------PVSSTKSFTGHLLGAAG 362
Query: 977 LVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAF 1036
V I ++++++ +P + + ++YI + +K ++ + F
Sbjct: 363 AVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY---GQGLEK------EIPYAISNTF 413
Query: 1037 GMSGTNAHIVLQEY 1050
G G NA + + +
Sbjct: 414 GFGGHNAVLAFKRW 427
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 8e-33
Identities = 92/443 (20%), Positives = 153/443 (34%), Gaps = 71/443 (16%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
P W+ LI + + + K + G FDP
Sbjct: 36 PLGCGKELVWQRLIGGGSGLRRLGD--DIAGEL---SAKVGGTVQDVAEDPEGG---FDP 87
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVGVEEGS-----N 756
+ E +MD + + + AL +AG+ P + + V G
Sbjct: 88 ERS-VPHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAE 146
Query: 757 YQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVA 801
+ NL + +I +GP+ TAC++S+ A
Sbjct: 147 AVRIGETRGVRRLSPFTIPFFLSNLAAGQISI-------KHRFRGPLGCPVTACAASVQA 199
Query: 802 THIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDERANG 855
A + +R E D ++ G + +A LS P FD +G
Sbjct: 200 IGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDG 259
Query: 856 LVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSV 913
V E VV++ L AL+ G A I G G D +TA +G +K
Sbjct: 260 FVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADA--YHMTAGPDDGSGAMRAMKLA 317
Query: 914 YKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFA 973
+ ++ PE ++Y+ H T T +GD EI AL VF AI+S KS GH
Sbjct: 318 LRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGP----AISSTKSATGHLLG 373
Query: 974 ASGLVSLINLVQSIKYKIIPASLHCEKEN------NYIILKNSPFYINKSNKKWNTVNEK 1027
A+G + + +++ ++P +L+ E + + I +
Sbjct: 374 AAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLI-----G---PAARHV------P 419
Query: 1028 LRIGAVSAFGMSGTNAHIVLQEY 1050
+ I + FG G NA ++ + Y
Sbjct: 420 VEIALSNGFGFGGVNASVLFRRY 442
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-32
Identities = 85/441 (19%), Positives = 156/441 (35%), Gaps = 81/441 (18%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
+ +I WK L+ + I + + + + K G +
Sbjct: 24 SISPDIESTWKGLLAGESGIHALED--EF---------VTKWDLAVKIGGHLKD----PV 68
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV-----GVEEGSNY 757
+ L+ RM QR E AG ++ + + V G E
Sbjct: 69 DSH-MGRLDMRRMSYVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVES 125
Query: 758 QDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
D ++ N + + + + VM +ACSS A
Sbjct: 126 YDLMNAGGPRKVSPLAVQMIMPNGAAAVIGL-------QLGARAGVMTPVSACSSGSEAI 178
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERANGLV 857
A + + + D A+ GV I A + +S P+ FD+ +G V
Sbjct: 179 AHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFV 238
Query: 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYK 915
EA ++++ A + G A + G+GI D + AP +G+ + +
Sbjct: 239 FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDA--FHMVAPAADGVRAGRAMTRSLE 296
Query: 916 KSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAAS 975
+ L+P DI+++ HGT T +GD E NA+ ++ A+ + KS +GH+ A
Sbjct: 297 LAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCDQA------AVYAPKSALGHSIGAV 350
Query: 976 GLVSLINLVQSIKYKIIPASLHCEKEN-----NYIILKNSPFYINKSNKKWNTVNEKLRI 1030
G + + V +++ +IP +L+ E + + + + R
Sbjct: 351 GALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVV-----A---GEPRYG------DYRY 396
Query: 1031 GAVS-AFGMSGTNAHIVLQEY 1050
AV+ +FG G N + Y
Sbjct: 397 -AVNNSFGFGGHNVALAFGRY 416
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 129 bits (328), Expect = 4e-32
Identities = 98/439 (22%), Positives = 165/439 (37%), Gaps = 75/439 (17%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDP 702
A + WK+L++ + I + + + ++ P++ G + +EFD
Sbjct: 40 ALATDAETTWKLLLDRQSGIRTLDDPFVEE---FDLPVRIG--------GHLL--EEFDH 86
Query: 703 LFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFV-----GVEEGSNY 757
+++ +E RM QR S E+AG ++ ++ + + EE
Sbjct: 87 ---QLTRIELRRMGYLQRMSTVLSRRLWENAGS--PEVDTNRLMVSIGTGLGSAEELVFS 141
Query: 758 QDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
D + N + + K VM +AC+S A
Sbjct: 142 YDDMRARGMKAVSPLTVQKYMPNGAAAAVGL-------ERHAKAGVMTPVSACASGAEAI 194
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEA---YIAMTSAGMLS-----PDGKCYVFDERAN 854
A Q + E D AI GV I + M +S P G C FD +
Sbjct: 195 ARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIV--MSTNNDDPAGACRPFDRDRD 252
Query: 855 GLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKS 912
G V E ++++ A + G I A I G+ I DG + AP NG I
Sbjct: 253 GFVFGEGGALLLIETEEHAKARGANILARIMGASITSDG--FHMVAPDPNGERAGHAITR 310
Query: 913 VYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTF 972
+ + L P DI+++ H TGT++GD E A+++ A+ + KS +GH+
Sbjct: 311 AIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGNR-----PAVYAPKSALGHSV 365
Query: 973 AASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGA 1032
A G V I V +++ ++IP +L+ + I L + R A
Sbjct: 366 GAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVA---GEPRPG------NYRY-A 415
Query: 1033 VS-AFGMSGTNAHIVLQEY 1050
++ +FG G N I Y
Sbjct: 416 INNSFGFGGHNVAIAFGRY 434
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 5e-32
Identities = 91/428 (21%), Positives = 157/428 (36%), Gaps = 64/428 (14%)
Query: 647 NINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFE 706
N E L K IS E + + + G + D
Sbjct: 39 NTEEVTASLREAKSGISRAEE--YA-----------ELGFRCQ----VHGAPDIDIESL- 80
Query: 707 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVG---------VEEGSNY 757
+ A+ DAG +++N++ G+ +G V+
Sbjct: 81 VDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADIT 140
Query: 758 QDR-LDQVN---LTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATH-I--ACQSLR 810
+++ +V + ++ SA LA F +KG +I++AC++S H I A + ++
Sbjct: 141 REKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATS---NHCIGNAYEMIQ 197
Query: 811 QHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDERANGLVPSEAVVA 864
+ D + G + + + + G +S P +D+ +G V +
Sbjct: 198 YGKQDRMFAGGCEDLDWTLS-VLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGV 256
Query: 865 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 924
+VL+ L AL+ G I+ I G G DG + AP+G +K I
Sbjct: 257 LVLEDLETALARGAKIYGEIVGYGATSDG--YDMVAPSGEGAIRCMKMALSTV---TSKI 311
Query: 925 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLV 984
+YI H T T GD EI A+ +F I + KS GH+ A+G+ I +
Sbjct: 312 DYINPHATSTPAGDAPEIEAIRQIFGAGDVC---PPIAATKSLTGHSLGATGVQEAIYSL 368
Query: 985 QSIKYKIIPASLHCEK--ENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTN 1042
++ I S H E+ + P + + +L ++FG GTN
Sbjct: 369 LMMQNNFICESAHIEELDPA----FADMPIVRKRIDNV------QLNTVLSNSFGFGGTN 418
Query: 1043 AHIVLQEY 1050
A +V Q Y
Sbjct: 419 ATLVFQRY 426
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 6e-32
Identities = 109/447 (24%), Positives = 189/447 (42%), Gaps = 81/447 (18%)
Query: 643 PAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDE--- 699
P A + E WK L+ + + E F+ + + + IP D
Sbjct: 22 PLASGVEETWKRLLAGESGARRVTE--FE-----------VDDLACQIACRIPVGDGTNG 68
Query: 700 -FDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFV-----GVE 752
F+P + P E ++DP + + + AL+DAG+ P +Q + G+ + G+E
Sbjct: 69 TFNPDLH-MDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIE 127
Query: 753 EGSNYQDRLDQ---------------VNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 797
L +NL S H +I L+GP ++ TAC++
Sbjct: 128 GIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSI-------KHKLRGPNHSVVTACAT 180
Query: 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDE 851
A A + + + D ++ G +S + + LS P +DE
Sbjct: 181 GTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDE 240
Query: 852 RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTEL 909
+G V E VVL+ L AL+ G I+A + G G++ D ITAP +G
Sbjct: 241 DRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDA--FHITAPTESGEGAQRC 298
Query: 910 IKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIG 969
+ + K++ + P++I+YI HGT T + D +E+ A+ V +++S KS+IG
Sbjct: 299 MVAALKRAGIVPDEIDYINAHGTST-MADTIELGAVERVVGEAAAK---ISMSSTKSSIG 354
Query: 970 HTFAASGLVSLINLVQSIKYKIIPASLHCEKEN-----NYIILKNSPFYINKSNKKWNTV 1024
H A+G + +I+ I PA+L+ + + + P +K ++
Sbjct: 355 HLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLV-----P---HKPRER---- 402
Query: 1025 NEKLRIGAVS-AFGMSGTNAHIVLQEY 1050
K+ + A+S +FG GTNA +VL+ Y
Sbjct: 403 --KIDV-ALSNSFGFGGTNASLVLRRY 426
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 6e-30
Identities = 91/433 (21%), Positives = 164/433 (37%), Gaps = 75/433 (17%)
Query: 647 NINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFE 706
N E L + I+ E + + S +G++ D
Sbjct: 18 NQQEVLASLREGRSGITFSQE--LK-----------DSGMRSHVWGNVK----LDTTGL- 59
Query: 707 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQ-KIGMFVGVEEGSNYQDRLDQVN 765
I M + A+ DAG P N ++G+ G GS + ++ +
Sbjct: 60 IDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSP-RFQVFGAD 118
Query: 766 LTSTHNA---------------ILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLR 810
+SA LA + G +I++AC++S A + ++
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 811 QHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDERANGLVPSEAVVA 864
+ D + G + A + G LS P+ +D +G V +
Sbjct: 179 LGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGM 237
Query: 865 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 924
VV++ L AL+ G I+A I G G DG + AP+G +K + I
Sbjct: 238 VVVEELEHALARGAHIYAEIVGYGATSDG--ADMVAPSGEGAVRCMKMAMHGVD---TPI 292
Query: 925 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLV 984
+Y+ +HGT T +GD E+ A+ +VF +K+ AI++ K+ GH+ A+G+ I +
Sbjct: 293 DYLNSHGTSTPVGDVKELAAIREVFGDKSP-----AISATKAMTGHSLGAAGVQEAIYSL 347
Query: 985 QSIKYKIIPASLHCEK-----ENNYIILKNSPFYINK--SNKKWNTVNEKLRIGAVSAFG 1037
+++ I S++ E+ I+ + + + SN +FG
Sbjct: 348 LMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSN----------------SFG 391
Query: 1038 MSGTNAHIVLQEY 1050
GTNA +V+++
Sbjct: 392 FGGTNATLVMRKL 404
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-25
Identities = 52/238 (21%), Positives = 89/238 (37%), Gaps = 30/238 (12%)
Query: 237 GTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNS----IIYKKLKKFNNKAIYIQ 291
GT L+TGGTG LG + +L+ + NL+L R + + +L + +
Sbjct: 531 GTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQA 590
Query: 292 VDVSDK---LKMISEINSIINNIGPIDGVLHIAGISGLTSNILEA-NYKNFYSVLSSKIS 347
DV+D+ K+++ I P+ V+H AG+ L + E+ + VL K+
Sbjct: 591 CDVADRETLAKVLASIPDE----HPLTAVVHAAGV--LDDGVSESLTVERLDQVLRPKVD 644
Query: 348 GTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKN 407
G L ++ + FSS S +LG G +YA N F A+ ++
Sbjct: 645 GARNLLELID---------PDVALVLFSSVSGVLGSGGQGNYAAANSFLDALAQQRQSRG 695
Query: 408 IYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465
+ ++ W W E S + +GL F+
Sbjct: 696 L------PTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGA 747
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 2e-22
Identities = 47/304 (15%), Positives = 89/304 (29%), Gaps = 57/304 (18%)
Query: 700 FDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMF-VGVEEGS--- 755
+D + + +++DP ++L AL +G + + + VG GS
Sbjct: 1168 WDARRYGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVG 1227
Query: 756 -------NYQDRLDQ-------------VNLTSTHNAILSARLAYFMDLKGPVMAINTAC 795
Y+DR + + N +L + GP+ AC
Sbjct: 1228 GTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL-------LSSTGPIKTPVGAC 1280
Query: 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYI------AMTSAGMLS-----PDG 844
++++ + + ++ Q + + G + E A ++A P
Sbjct: 1281 ATAVESLDVGYDTIMQGKARVCLVGGFD-DFQEEGSYEFANMGATSNAKEEFARGREPGE 1339
Query: 845 KCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPN-G 903
NG + S+ V+ AL G PI+ I+ + D G + P G
Sbjct: 1340 MSRPTSTTRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDK--IGRSVPAPG 1397
Query: 904 ISQTELIKSVYKKSNLNPEDINY-----------IITHGTGTKLGDPVEINALHDVFKNK 952
+ DI Y I L E+ A+ +
Sbjct: 1398 QGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEE 1457
Query: 953 TYNQ 956
Sbjct: 1458 DGPF 1461
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 83.1 bits (205), Expect = 4e-16
Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 6/134 (4%)
Query: 915 KKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQ-KFCAITSNKSNIGHTFA 973
L +D+ HGT T D E + + K+ + K GH
Sbjct: 1508 ATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKG 1567
Query: 974 ASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAV 1033
A+G L +Q + I+P + + + + + + Y ++S K + ++ +V
Sbjct: 1568 AAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKT-----DGIKAFSV 1622
Query: 1034 SAFGMSGTNAHIVL 1047
++FG A +
Sbjct: 1623 TSFGFGQKGAQAIG 1636
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525 | Back alignment and structure |
|---|
Score = 88.3 bits (219), Expect = 4e-18
Identities = 32/182 (17%), Positives = 59/182 (32%), Gaps = 33/182 (18%)
Query: 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN---------- 285
GT L+TG + L + +L+L + +
Sbjct: 251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAEL 310
Query: 286 -----KAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAG------ISGLTSNILEAN 334
A + D++D + + + P+ VLH+ ++ ++ L
Sbjct: 311 ADLGATATVVTCDLTDAEAAARLLAGVSDA-HPLSAVLHLPPTVDSEPLAATDADALAR- 368
Query: 335 YKNFYSVLSSKISGTIALNYALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGN 393
V+++K + + L+ L + V FSS +AI G G YA G
Sbjct: 369 ------VVTAKATAALHLDRLLRE--AAAAGGRPPVLVL-FSSVAAIWGGAGQGAYAAGT 419
Query: 394 RF 395
F
Sbjct: 420 AF 421
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 88.1 bits (218), Expect = 1e-17
Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 6/152 (3%)
Query: 897 GITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQ 956
G + ++ L +D+ HGT TK D E ++++ K+ ++
Sbjct: 1509 GNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSE 1568
Query: 957 -KFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 1015
K GH A+G + +Q + IIP + + + + + Y +
Sbjct: 1569 GNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPS 1628
Query: 1016 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 1047
K+ K + +R ++++FG ++
Sbjct: 1629 KTLKT-----DGVRAVSITSFGFGQKGGQAIV 1655
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 88.1 bits (218), Expect = 1e-17
Identities = 48/331 (14%), Positives = 97/331 (29%), Gaps = 69/331 (20%)
Query: 700 FDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMF-VGVEEGS--- 755
++ + IS ++DP +L A +G + + + VG GS
Sbjct: 1193 WNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMG 1252
Query: 756 -------NYQDRLDQVNLTSTH------NAILSARLAYFMDLKGPVMAINTACSSSLVAT 802
++DR + + N + + + GP+ AC++S+ +
Sbjct: 1253 GVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESV 1312
Query: 803 HIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAG---M--LS-----------PDGKC 846
I +++ + I G + + S M S P
Sbjct: 1313 DIGVETILSGKARICIVGGY------DDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMS 1366
Query: 847 YVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP---NG 903
NG + ++ ++ + AL G PI+ I+ + D G + P G
Sbjct: 1367 RPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDK--IGRSVPAPGKG 1424
Query: 904 ISQT------------ELIKSVYKKSNLN----------PEDINYIITHGTGTKLGDPVE 941
I T + Y+K L ++ + D E
Sbjct: 1425 ILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNE 1484
Query: 942 INALHDVFKNKTYNQKFCAITSNKSNIGHTF 972
+N+ + + + G+ F
Sbjct: 1485 FLLERTRE---IHNEAESQLRAAQQQWGNDF 1512
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 2e-16
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS----IIYKKLKKFNNKAIYIQ 291
G+ L+TGGTG +G + L + + +L+L+ R ++ + +L++ +
Sbjct: 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAA 298
Query: 292 VDVSDKLKMISEINSIINNI---GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISG 348
D +D+ + +++ + P+ V H AG++ + + + +++ +K++
Sbjct: 299 CDAADR----EALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTA 354
Query: 349 TIALN-YALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRF 395
A + + L LD FV FSS +A+ G G YA N +
Sbjct: 355 --ARHLHEL------TADLDLDAFVL-FSSGAAVWGSGGQPGYAAANAY 394
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 9e-16
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS----IIYKKLKKFNNKAIYIQ 291
GT L+TGGTG +G + +L + + +L+L RS ++ + +L+ +
Sbjct: 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 285
Query: 292 VDVSDKLKMISEINSIINNIG---PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISG 348
DV+D+ + ++ IG P+ V H A + + + +K+ G
Sbjct: 286 CDVTDR----ESVRELLGGIGDDVPLSAVFHAAATLDDGT-VDTLTGERIERASRAKVLG 340
Query: 349 TIALN-YALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRF 395
A N + L ++ L FV FSS ++ G G YA GN +
Sbjct: 341 --ARNLHEL------TRELDLTAFVL-FSSFASAFGAPGLGGYAPGNAY 380
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 81.1 bits (199), Expect = 2e-15
Identities = 109/668 (16%), Positives = 232/668 (34%), Gaps = 183/668 (27%)
Query: 36 SNKD----FQNKIVES-----ISSYTDIIFI-EQSDNIKISPNDTVH-YKI------NKD 78
KD F++ V++ + I E+ D+I +S + ++ ++
Sbjct: 17 QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76
Query: 79 NI----------NDYTFILNKIYE--KDKKIDSVFYLWPLEDKNCIYNIMPII--YF--- 121
+ +Y F+++ I + + + Y +E ++ +YN + Y
Sbjct: 77 EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY---IEQRDRLYNDNQVFAKYNVSR 133
Query: 122 LQAVKKSKLYLRKL-----II------SGISI-------NKKNEEDLYYCYFNSWVAF-- 161
LQ K + L +L ++ SG + + K + + + F W+
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF--WLNLKN 191
Query: 162 --ERSLHIIMPET---QISIVFAEKITN-FNIKNWINILFKELQEPKLFSIMYYGNDLIR 215
+ M + QI + + + NIK I+ + EL+ +L Y N L
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR--RLLKSKPYENCL-- 247
Query: 216 YQLNIKSIILKDFKNSYIKQ----GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK 271
++L + +N+ L+T T + +D+L +T++ L S
Sbjct: 248 -------LVLLNVQNAKAWNAFNLSCKILLT--TRFKQV--TDFLSAATTTHISLDHHSM 296
Query: 272 LNSIIYKKLKKFNNKAI---YIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTS 328
L K++ Y+ D L E+ + P ++ I+
Sbjct: 297 T-------LTPDEVKSLLLKYLDCRPQD-LP--REVLT----TNP----RRLSIIAESIR 338
Query: 329 NILEANYKNFYSVLSSKISGTIALNY-ALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387
+ L A + N+ V K++ I + LE + +
Sbjct: 339 DGL-ATWDNWKHVNCDKLTTIIESSLNVLEPAEYR--------KMFD------------- 376
Query: 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQK 447
++ F + +I L+++ +W + ++ K K
Sbjct: 377 RLSV---FP-------PSAHI----PTILLSL---IWFDVIK----SDVMVVVNKLHKYS 415
Query: 448 VLHENDGLKLFEQLLIQDKIQYLVLSGELEKL----NQIIN--NIAPKVSENKKINNFNI 501
++ + I YL L +LE I++ NI PK ++ + +
Sbjct: 416 LVEKQPKESTIS---IPS--IYLELKVKLENEYALHRSIVDHYNI-PKTFDSDDLIPPYL 469
Query: 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGF-------DSISLAEFSRILS-----K 549
+++ + I +H+ NI + ++ +++ L D+ F DS + IL+ K
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFL-DFRFLEQKIRHDSTAWNASGSILNTLQQLK 528
Query: 550 FYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTESKNISILYDNK--IN 607
FY I + Y L I F+ +I +KY T+ I+++ +++
Sbjct: 529 FYKPYICDND-PKYERLVNAILDFLPKIEENLI---CSKY---TDLLRIALMAEDEAIFE 581
Query: 608 ENYENVSK 615
E ++ V +
Sbjct: 582 EAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.2 bits (150), Expect = 8e-10
Identities = 102/735 (13%), Positives = 208/735 (28%), Gaps = 260/735 (35%)
Query: 493 NKKINNFNIEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYS 552
K I + F + + N C K++ D +S E I+
Sbjct: 18 YKDI----LSVFEDAFVDNFDC-------------KDVQDMPKSILSKEEIDHII----- 55
Query: 553 LDIMPSIFFSYSTLERLITYFIKNHNNTMIKFY----RNKY-----PLKTESKN---ISI 600
+ + S RL + + KF R Y P+KTE + ++
Sbjct: 56 --MSKD---AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTR 110
Query: 601 LYDNKINENYE--------NVSKKSNFI-LNKN-TDINSEELIAIIGMSG---------- 640
+Y + + Y NVS+ ++ L + ++ + + I G+ G
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 641 ----RFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPG 696
+ + FW + + N + + E + KL Y +I+ W
Sbjct: 171 CLSYKVQCKMDFKIFW-LNLKNCNSPETVLEML--QKLLY--------QIDPNW---TSR 216
Query: 697 IDEFDPLFFEISPLEAERMDPRQRHLLQE-----SWLALEDAGYGPNQIANQK-IGMFVG 750
D + L + R LL+ L L + + N K F
Sbjct: 217 SDHSSNI-----KLRIHSIQAELRRLLKSKPYENCLLVLLN-------VQNAKAWNAF-- 262
Query: 751 VEEGSNYQDRLDQVNLTSTHNA----ILSARLAYFMDLKGPVMAINTACSSSLVA--THI 804
N ++ L +T LSA + L M + SL+
Sbjct: 263 -----NLSCKI----LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313
Query: 805 ACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGM------------------------- 839
Q L + +P +++ + +
Sbjct: 314 RPQDLPREVLT----------TNPRR-LSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 840 ---LSPDG--KCY----VFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN 890
L P K + VF A+ +P+ +L + + D +
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAH--IPTI-----LLSLIWFDVIKSDVM---------- 405
Query: 891 YDGKTNGITAPNGISQTELIKSVYKKS--NLNPEDINYIITHGTGTKLGDPVEIN-ALHD 947
++ ++K S P++ I +L +E ALH
Sbjct: 406 -----------------VVVNKLHKYSLVEKQPKESTISI-PSIYLELKVKLENEYALHR 447
Query: 948 VFKNKTYN--QKFCAITSNKSNI-GHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 1004
+ YN + F + + + + I + H + +
Sbjct: 448 SIVDH-YNIPKTFDSDDLIPPYLDQYFY------------SHIGH-------HLKNIEHP 487
Query: 1005 IILKNSPF---YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNN 1061
+ + F +++ ++ + +K+R +A+ SG+ + + Q K K
Sbjct: 488 --ERMTLFRMVFLDF---RF--LEQKIR-HDSTAWNASGSILNTLQQ------LKFYKPY 533
Query: 1062 TFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCIENFVYTLMQGRHHFQYRCAI 1121
+ Y +V + I +F+ + + +Y +
Sbjct: 534 ICDNDPKYERLVNA-------------------------ILDFLPKIEENLICSKYTDLL 568
Query: 1122 IISSIEEVVKIINDT 1136
I+ + E I +
Sbjct: 569 RIALMAEDEAIFEEA 583
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 2e-07
Identities = 52/320 (16%), Positives = 92/320 (28%), Gaps = 88/320 (27%)
Query: 13 WVKSPLISLPISKVKKNNLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIKISPNDTVH 72
++ LP + N + I ESI DN K D +
Sbjct: 310 YLDCRPQDLPREVLTTNPRRL--------SIIAESIRDGLATW-----DNWKHVNCDKLT 356
Query: 73 YKINKDNINDYTFILNK-------IYEKDKKIDSVFY--LWPLEDKNCIYNIM------- 116
I + ++N + ++ I ++ +W K+ + ++
Sbjct: 357 -TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 117 -------------PIIYFLQAVKKSKLY-LRKLIISGISINKK--------NEEDLYYCY 154
P IY VK Y L + I+ +I K D Y+
Sbjct: 416 LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475
Query: 155 FNSWVAFERSLHIIMPE-TQISIVFAEKITNFNIKNWINILFKELQEPKLFSIMYYGNDL 213
+ H+ E + +F +F ++ E K+ N
Sbjct: 476 H---IGH----HLKNIEHPERMTLFRMVFLDF---RFL--------EQKIRHDSTAWNA- 516
Query: 214 IRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYL--INKYSTNLILSGRSK 271
LN L+ K Y I + L + L + K NLI SK
Sbjct: 517 SGSILN----TLQQLKF-YKPY-----ICDNDPKYERLVNAILDFLPKIEENLI---CSK 563
Query: 272 LNSIIYKKLKKFNNKAIYIQ 291
++ L ++AI+ +
Sbjct: 564 YTDLLRIAL-MAEDEAIFEE 582
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511 | Back alignment and structure |
|---|
Score = 77.5 bits (191), Expect = 8e-15
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS----IIYKKLKKFNNKAIYIQV 292
GT LITGG G +G + L + + L+L+ R + + ++L+ + ++
Sbjct: 260 GTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAAC 319
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
DV+++ + + + + P + V H AGI I + ++F +V +K+ G L
Sbjct: 320 DVAERDALAALVTAY-----PPNAVFHTAGILDDAV-IDTLSPESFETVRGAKVCGAELL 373
Query: 353 NYALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRF 395
+ + LD FV FSS + G+ G YA N
Sbjct: 374 HQLTADI------KGLDAFVL-FSSVTGTWGNAGQGAYAAANAA 410
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} Length = 212 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 5e-10
Identities = 13/68 (19%), Positives = 33/68 (48%)
Query: 505 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYS 564
I++ +K + +L ++ D G DS++ ++ R +S+ +S+ + +++
Sbjct: 131 IQDYLKQSLGELLFLDPGQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWP 190
Query: 565 TLERLITY 572
TL+ L
Sbjct: 191 TLKSLADE 198
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} Length = 212 | Back alignment and structure |
|---|
Score = 56.9 bits (137), Expect = 5e-09
Identities = 12/69 (17%), Positives = 28/69 (40%)
Query: 505 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYS 564
++ + +L + +I + G DS+ A++ R ++K Y L I ++Y
Sbjct: 27 CAQFLRQSLAAMLYCEPGQIRDGSRFLELGLDSVIAAQWIREINKHYQLKIPADGIYTYP 86
Query: 565 TLERLITYF 573
+ +
Sbjct: 87 VFKAFTQWV 95
|
| >2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A Length = 88 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 1e-09
Identities = 12/73 (16%), Positives = 31/73 (42%)
Query: 505 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYS 564
I++ + + L+ +I ++ +Y +S L K+ ++ P + F+Y
Sbjct: 15 IQSWLIDQFAQQLDVDPDDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYP 74
Query: 565 TLERLITYFIKNH 577
T+ +L + +
Sbjct: 75 TIAQLAKRLGELY 87
|
| >2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} Length = 89 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 2e-08
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 505 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMP--SIFFS 562
+ + + E+ + N AD G DS+S + LD+ P S+F
Sbjct: 12 KLDAVMRVVSEESGIALEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFID 71
Query: 563 YSTLERLITYFIKNHNN 579
+T+ L + + + +
Sbjct: 72 CTTVRALKDFMLGSGDA 88
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 32/146 (21%)
Query: 240 LITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 298
L+TG +G++G YL KY N+I S + ++ K +I +DVS++
Sbjct: 3 LVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIK----------FITLDVSNR- 51
Query: 299 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA-LNYALE 357
EI+ + ID + H+AGI E + Y V ++GT L A +
Sbjct: 52 ---DEIDRAVEKYS-IDAIFHLAGILSAKG---EKDPALAYKVN---MNGTYNILEAAKQ 101
Query: 358 NTILKLQKNKLDFVCYFSSSSAILGD 383
+ + K+ S+ + G
Sbjct: 102 HRVEKV---------VIPSTIGVFGP 118
|
| >2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A* Length = 99 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-05
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 509 IKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLER 568
+K + L T++SEI +++ D G DSI E++ +++ Y+L++ + + Y TL
Sbjct: 26 LKQQLAEALYTEESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLE 85
Query: 569 LITY 572
L Y
Sbjct: 86 LSGY 89
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 29/147 (19%)
Query: 239 YLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDK 297
LI G G++G + L Y + N+I S KLN N + V+ D
Sbjct: 5 ILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN-------TDVVNSGPFEVVNALDF 57
Query: 298 LKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTI-ALNYAL 356
++I ++ I + +A + T+ KN ++ LN A
Sbjct: 58 ----NQIEHLVEVHK-ITDIYLMAALLSATAE------KNPAFAWDLNMNSLFHVLNLAK 106
Query: 357 ENTILKLQKNKLDFVCYFSSSSAILGD 383
I K+ ++ SS A+ G
Sbjct: 107 AKKIKKI---------FWPSSIAVFGP 124
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 4e-04
Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 31/163 (19%)
Query: 229 KNSYIKQGGTYLITGGTGRLGMLFSDYLINKYS------TNLILSGRSKLNSIIYKKLKK 282
+N Y QG I G G +G + L+ S L +
Sbjct: 8 ENLYF-QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV-----FQPEAPAG 61
Query: 283 FNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVL 342
F+ D+S E ++ D + H+A I + E ++ Y +
Sbjct: 62 FSGAVDARAADLSAP----GEAEKLVEA--RPDVIFHLAAIVSGEA---ELDFDKGYRI- 111
Query: 343 SSKISGTIALNYALENTILKLQKNKLDFVC--YFSSSSAILGD 383
+ GT L + +++ K + F+SS A+ G
Sbjct: 112 --NLDGTRYL---FD--AIRIANGKDGYKPRVVFTSSIAVFGA 147
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 8e-04
Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 39/151 (25%)
Query: 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDK 297
L+TG G+LG + + L L L+ S L+ +Q D++D
Sbjct: 5 RLLVTGAAGQLGRVMRERLAPMAEI-LRLADLSPLDPA--------GPNEECVQCDLADA 55
Query: 298 LKMISEINSIINNIGPIDGVLHIAGISGLTS--NILEANYKNFYSVLSSKISGTIA-LNY 354
+ +N+++ DG++H+ GIS IL+ N I G
Sbjct: 56 ----NAVNAMVAG---CDGIVHLGGISVEKPFEQILQGN-----------IIGLYNLYEA 97
Query: 355 ALENTILKLQKNKLDFVCYFSSSSAILGDFG 385
A + + V F+SS+ +G +
Sbjct: 98 ARAHGQPR-------IV--FASSNHTIGYYP 119
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1152 | |||
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 100.0 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 100.0 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 100.0 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 99.98 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 99.97 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 99.97 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 99.97 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.97 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 99.97 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 99.97 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 99.97 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 99.96 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.96 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.96 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.96 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.96 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 99.96 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.96 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.96 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.95 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.95 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.95 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.95 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.95 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.94 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.94 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.94 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.94 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.94 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.94 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.94 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.93 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.93 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.93 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.93 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.93 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.93 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.93 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.93 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.93 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.93 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.93 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.93 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.93 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.93 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.93 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.93 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.93 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.93 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.93 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.93 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.93 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.93 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.93 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.93 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.93 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.93 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.93 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.93 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.93 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.93 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.93 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.93 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.92 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.92 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.92 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.92 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.92 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.92 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.92 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.92 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.92 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.92 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.92 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.92 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.92 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.92 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.92 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.92 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.92 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.92 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.92 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.92 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.92 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.92 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.92 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.92 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.92 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.92 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.92 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.92 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.92 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.92 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.92 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.92 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.92 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.92 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.92 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.92 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.92 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.92 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.92 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.91 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.91 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.91 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.91 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.91 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.91 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.91 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.91 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.91 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.91 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.91 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.91 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.91 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.91 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.91 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.91 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.91 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.91 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.91 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.91 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.91 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.91 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.91 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.91 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.91 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.91 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.91 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.91 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.91 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.91 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.91 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.91 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.91 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.91 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.9 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.9 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.9 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.9 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.9 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.9 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.9 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.9 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.9 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.9 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.9 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.9 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.9 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.9 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.9 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.9 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.9 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.9 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.9 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.9 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.9 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.9 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.89 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.89 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.89 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.89 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.89 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.89 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.89 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.89 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.89 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.89 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.89 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.89 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.89 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.89 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.89 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.89 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.89 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.89 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.89 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.89 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.89 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.89 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.89 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.89 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.89 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.89 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.89 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.89 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.89 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.89 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.89 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.89 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.89 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.88 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.88 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.88 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.88 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.88 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.88 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.88 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.88 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.88 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.88 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.88 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.88 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.88 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.87 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.87 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.87 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.87 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.87 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.87 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.87 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.87 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.87 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.86 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.86 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.86 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.86 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.86 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.85 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.85 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.85 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.85 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.85 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.85 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.85 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.85 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.85 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.84 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.84 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.84 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.84 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.82 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.81 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.8 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.8 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.8 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.79 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.79 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.77 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.77 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.76 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.74 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.65 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.61 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.61 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.55 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.5 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.5 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.5 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.49 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.46 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.45 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.45 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.44 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.44 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.43 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.43 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.42 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.42 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.42 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.41 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.41 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.41 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.4 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.4 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.4 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.39 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.39 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.39 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.38 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.38 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.38 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.37 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.36 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.36 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.36 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.36 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.36 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.36 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.36 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.35 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.35 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.34 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.33 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.33 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.32 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.32 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.32 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.32 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.32 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.32 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.32 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.32 | |
| 2ju1_A | 95 | Erythronolide synthase; carrier protein domain, mo | 99.31 | |
| 3tzy_A | 491 | Polyketide synthase PKS13; acyltransferase, long f | 99.31 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.31 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.31 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.3 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.29 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.29 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.29 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.29 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.28 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.28 | |
| 2afd_A | 88 | Protein ASL1650; twisted antiparallel helical bund | 99.28 | |
| 4i4d_A | 93 | Peptide synthetase NRPS type II-PCP; structural ge | 99.28 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.26 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.26 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.26 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.26 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.25 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.23 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.23 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.23 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.22 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.22 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.22 | |
| 2liu_A | 99 | CURA; holo state, transferase; NMR {Lyngbya majusc | 99.22 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.22 | |
| 2kr5_A | 89 | PKS, aflatoxin biosynthesis polyketide synthase; a | 99.22 | |
| 1dny_A | 91 | Non-ribosomal peptide synthetase peptidyl carrier | 99.21 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.21 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.2 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.19 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.19 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.18 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.17 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.16 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.14 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.13 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.13 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.13 | |
| 2cg5_B | 91 | Fatty acid synthase; transferase-hydrolase complex | 99.12 | |
| 2ava_A | 82 | ACP I, acyl carrier protein I, chloroplast; four-h | 99.12 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.11 | |
| 2cq8_A | 110 | 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH | 99.11 | |
| 1l0i_A | 78 | Acyl carrier protein; acyl chain binding, fatty ac | 99.1 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.1 | |
| 2ehs_A | 77 | ACP, acyl carrier protein; lipid transport, struct | 99.09 | |
| 2lol_A | 81 | ACP, acyl carrier protein; lipid transport; NMR {R | 99.09 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.07 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.07 | |
| 2kjs_A | 87 | Putative acyl carrier protein; alpha, ACP, PNS, st | 99.07 | |
| 2cnr_A | 82 | FAS, ACP, acyl carrier protein; polykdetide, phosp | 99.07 | |
| 1x3o_A | 80 | Acyl carrier protein; structural genomics, riken s | 99.07 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.02 | |
| 3gzm_A | 81 | Acyl carrier protein; helix bundle, phosphopanteth | 99.02 | |
| 2qnw_A | 82 | Acyl carrier protein; malaria, SGC, structural gen | 99.02 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.01 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 99.01 | |
| 2dnw_A | 99 | Acyl carrier protein; ACP, fatty acid biosynthesis | 99.01 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.0 | |
| 2kwl_A | 84 | ACP, acyl carrier protein; structural genomics, se | 99.0 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.0 | |
| 1f80_D | 81 | Acyl carrier protein; transferase; HET: PN2; 2.30A | 99.0 | |
| 1vku_A | 100 | Acyl carrier protein; TM0175, structural genomics, | 98.99 | |
| 1or5_A | 83 | Acyl carrier protein; ACP, biosynthesis, frenolici | 98.99 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 98.98 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 98.98 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 98.98 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 98.96 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 98.96 | |
| 1af8_A | 86 | Actinorhodin polyketide synthase acyl carrier Pro; | 98.95 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 98.94 | |
| 1klp_A | 115 | ACP, ACPM, meromycolate extension acyl carrier pro | 98.93 | |
| 1nq4_A | 95 | Oxytetracycline polyketide synthase acyl carrier p | 98.92 | |
| 3ejb_A | 97 | Acyl carrier protein; protein-protein complex, cyt | 98.9 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 98.9 | |
| 2l3v_A | 79 | ACP, acyl carrier protein; structural genomi seatt | 98.89 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 98.88 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 98.88 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 98.87 | |
| 2l4b_A | 88 | Acyl carrier protein; infectious disease, human gr | 98.83 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 98.83 | |
| 2kw2_A | 101 | Specialized acyl carrier protein; structural genom | 98.82 | |
| 2lte_A | 103 | Specialized acyl carrier protein; APO protein, tra | 98.31 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 98.8 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 98.8 | |
| 4dxe_H | 101 | ACP, acyl carrier protein; acyl-carrier-protein sy | 98.79 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 98.78 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 98.75 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 98.72 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 98.72 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 98.71 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 98.7 | |
| 2jq4_A | 105 | AGR_C_4658P, hypothetical protein ATU2571; ATC2521 | 98.69 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 98.67 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 98.67 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 98.67 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 98.66 | |
| 2amw_A | 83 | Hypothetical protein NE2163; all helical protein, | 98.65 | |
| 1dv5_A | 80 | APO-DCP, APO-D-alanyl carrier protein; 3-helix bun | 98.63 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 98.62 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 98.62 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 98.59 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 98.56 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 98.55 | |
| 4amm_A | 401 | DYNE8; transferase; 1.40A {Micromonospora chersina | 98.51 | |
| 3ce7_A | 107 | Specific mitochodrial acyl carrier protein; malari | 98.45 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.43 | |
| 2lki_A | 105 | Putative uncharacterized protein; helical bundle, | 98.43 | |
| 2kci_A | 87 | Putative acyl carrier protein; alpha, ACP, PCP, st | 98.39 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 98.38 | |
| 1fh1_A | 92 | NODF, nodulation protein F; ROOT nodulation factor | 98.38 | |
| 2l9f_A | 102 | CALE8, meacp; transferase, acyl carrier protein; N | 98.36 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 98.29 | |
| 2cgq_A | 113 | Acyl carrier protein ACPA; RV0033, protein transpo | 98.26 | |
| 4dg8_A | 620 | PA1221; ANL superfamily, adenylation domain, pepti | 98.22 | |
| 2fq1_A | 287 | Isochorismatase; ENTB, NRPS, multi-domain, ACP, hy | 98.18 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.15 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.14 | |
| 3rg2_A | 617 | Enterobactin synthase component E (ENTE), 2,3-DIH | 98.09 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.06 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 97.94 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 97.88 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 97.78 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 97.64 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.5 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.46 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 97.4 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.39 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.07 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 96.92 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 96.82 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 96.8 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 96.74 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 96.73 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 96.7 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.66 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.61 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 96.59 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 96.56 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.39 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 96.27 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 96.26 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 96.19 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.06 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 95.95 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 95.94 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 95.9 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 95.86 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 95.85 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 95.82 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 95.82 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 95.74 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 95.72 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 95.65 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 95.64 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 95.6 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 95.59 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 95.46 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 95.46 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 95.46 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 95.44 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 95.43 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 95.43 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 95.39 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 95.3 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 95.27 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 95.18 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 95.16 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 95.15 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 95.13 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 95.12 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 95.1 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 95.07 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 95.06 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 95.02 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 95.02 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 95.01 |
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-100 Score=978.00 Aligned_cols=504 Identities=32% Similarity=0.529 Sum_probs=467.5
Q ss_pred CCcEEEEeeeeccCCC-CCHHHHHHHHHcCCccccccCccc-ccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCC
Q psy616 630 EELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKI-FDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEI 707 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i 707 (1152)
+++|||||||||||++ .++++||++|.+|+++++++|++| |+.+.+|++++...++.+++++||+++++.||+.||||
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i 84 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGV 84 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTC
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCC
Confidence 5789999999999997 999999999999999999999999 99999999988888999999999999999999999999
Q ss_pred CHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-----ccccccccccchhhHHHHHHHHHc
Q psy616 708 SPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-----DRLDQVNLTSTHNAILSARLAYFM 782 (1152)
Q Consensus 708 s~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-----~~~~~~~~~~~~~~~~a~ris~~~ 782 (1152)
+|+|++.||||||++|+++|+|||||||+++++++.+||||+|++.++|.. ..++++.++++..+++++||||.|
T Consensus 85 ~~~ea~~mdp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~l 164 (915)
T 2qo3_A 85 SPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTM 164 (915)
T ss_dssp CHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHhCCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999988776642 123445567778889999999999
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCccccccc
Q psy616 783 DLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 862 (1152)
Q Consensus 783 ~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~ 862 (1152)
||+||+++|+|+||||++|||+||++|++|+||+|||||+|.+++|..+..|++++++|++|+|||||.++|||++|||+
T Consensus 165 gl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~gEGa 244 (915)
T 2qo3_A 165 GLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSEGV 244 (915)
T ss_dssp TBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBBCEE
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeecCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHH
Q psy616 863 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEI 942 (1152)
Q Consensus 863 ~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~ 942 (1152)
|+||||++++|++|||+||++|+|+++|+||++.+++.|++.+|.++|+++|++||++|+||+|||+|||||++||++|.
T Consensus 245 gavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~ 324 (915)
T 2qo3_A 245 TLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEA 324 (915)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHH
T ss_pred EEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecccccccc
Q psy616 943 NALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWN 1022 (1152)
Q Consensus 943 ~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~ 1022 (1152)
++|.++|+.......+|+|||+|+||||+++|||++++||++++|+|++|||++||++|||.|+|++++|+++++.++|+
T Consensus 325 ~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~w~ 404 (915)
T 2qo3_A 325 NALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWR 404 (915)
T ss_dssp HHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEECSSCEECC
T ss_pred HHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeeecCCcccc
Confidence 99999998765556789999999999999999999999999999999999999999999999999999999999999997
Q ss_pred ccCCCccEEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEEEEeecCCHHHHHHHHHHHHHHHHhCCCCCHH
Q psy616 1023 TVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCIE 1102 (1152)
Q Consensus 1023 ~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~~l~ 1102 (1152)
.. ..+|+++||||||||+|+|+|||+++...... ......+..+|+|||+|+++|+.++++|.+||+ ++...|.
T Consensus 405 ~~-~~~r~a~v~sfG~gG~Nah~vl~~~~~~~~~~----~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~l~-~~~~~l~ 478 (915)
T 2qo3_A 405 RG-ERTRRAAVSAFGISGTNAHVIVEEAPEREHRE----TTAHDGRPVPLVVSARSTAALRAQAAQIAELLE-RPDADLA 478 (915)
T ss_dssp SS-SSCCEEEEEEECTTSEEEEEEEEECCC------------CCSSCEEEEEEESSHHHHHHHHHHHHHHTT-SSSCCHH
T ss_pred cC-CCCcEEEEeeecCCCceEEEEEeecccccccc----ccccCCcccceeEecCCHHHHHHHHHHHHHHhc-CCccchh
Confidence 53 45799999999999999999999986432111 011122457899999999999999999999998 6778899
Q ss_pred HHHHHHHhcCCCCCcEEEEEeCCHHHHHHHHHHhhcc
Q psy616 1103 NFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNS 1139 (1152)
Q Consensus 1103 d~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~ 1139 (1152)
|+||||+++|+||+||++++++|.+||+++|+.+..+
T Consensus 479 d~~~tl~~~r~~~~~r~~~~~~~~~~l~~~l~~~~~~ 515 (915)
T 2qo3_A 479 GVGLGLATTRARHEHRAAVVASTREEAVRGLREIAAG 515 (915)
T ss_dssp HHHHHHHHSSCCCSEEEEEEESSHHHHHHHHHHHHHT
T ss_pred HHHHHHhhcccccCceEEEEECCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999987654
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-99 Score=967.25 Aligned_cols=491 Identities=33% Similarity=0.549 Sum_probs=448.3
Q ss_pred CCcEEEEeeeeccCCC-CCHHHHHHHHHcCCccccccCccc-ccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCC
Q psy616 630 EELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKI-FDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEI 707 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i 707 (1152)
.++||||||||||||+ .++++||++|.+|+++|+++|.+| |+. + ...+++||+++++.||+.||+|
T Consensus 38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~------~------~~~~~~~~l~~~~~fD~~~f~i 105 (917)
T 2hg4_A 38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP------D------PDARLGGMLAAAGDFDAGFFGI 105 (917)
T ss_dssp HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC------C------SSCCEEBCCTTTTEECTGGGTC
T ss_pred CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC------C------CCcceeeEecCccccChhhcCC
Confidence 4689999999999975 889999999999999999999998 631 1 1268899999999999999999
Q ss_pred CHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh------ccccccccccchhhHHHHHHHHH
Q psy616 708 SPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ------DRLDQVNLTSTHNAILSARLAYF 781 (1152)
Q Consensus 708 s~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~------~~~~~~~~~~~~~~~~a~ris~~ 781 (1152)
+|+|++.||||||++|+++|+|||||||+++++++.+||||+|++..+|.. ....++..+++..+++++||||.
T Consensus 106 ~~~ea~~mdp~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~ 185 (917)
T 2hg4_A 106 SPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYC 185 (917)
T ss_dssp CHHHHHHSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHH
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHh
Confidence 999999999999999999999999999999999999999999998776643 12344555667778999999999
Q ss_pred cCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccc
Q psy616 782 MDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 861 (1152)
Q Consensus 782 ~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG 861 (1152)
|||+||+++|+|+||||++|||+||++|++|+||+|||||+|++++|..+..|++++++|++|+|||||.++|||++|||
T Consensus 186 lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEG 265 (917)
T 2hg4_A 186 LGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEG 265 (917)
T ss_dssp HTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCE
T ss_pred cCCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy616 862 VVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941 (1152)
Q Consensus 862 ~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E 941 (1152)
+|+||||++++|+++|++|||+|+|+++|+||++.+++.|+..+|.++|+++|++||++|+||+|||+|||||++||++|
T Consensus 266 agavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E 345 (917)
T 2hg4_A 266 AGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIE 345 (917)
T ss_dssp EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHH
T ss_pred EEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccc
Q psy616 942 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 1021 (1152)
Q Consensus 942 ~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w 1021 (1152)
+++|.++|+.......+|+|||+|+||||+++|||++++||++++|+|++|||++||++|||.|+++.++|+++++.++|
T Consensus 346 ~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~~~~w 425 (917)
T 2hg4_A 346 VHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSW 425 (917)
T ss_dssp HHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCSCEEC
T ss_pred HHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCCcccC
Confidence 99999999875555678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccEEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEEEEeecCCHHHHHHHHHHHHHHHHhCCCCCH
Q psy616 1022 NTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTVCI 1101 (1152)
Q Consensus 1022 ~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~~l 1101 (1152)
+.. ..+|+++||||||||+|+|+|||+++..... .. .....+++|+|||+|+++|+.++++|.+||+.++...|
T Consensus 426 ~~~-~~~r~a~v~sfG~gG~Nah~vl~~~~~~~~~--~~---~~~~~~~~~~lsa~~~~~l~~~~~~~~~~l~~~~~~~l 499 (917)
T 2hg4_A 426 PAG-ERPRRAGVSSFGISGTNAHVIVEEAPEADEP--EP---APDSGPVPLVLSGRDEQAMRAQAGRLADHLAREPRNSL 499 (917)
T ss_dssp CCC-SSCCEEEEEEECTTSEEEEEEEEECCCCC-------------CCEEEEEEESSHHHHHHHHHHHHHHHHHCTTSCH
T ss_pred CCC-CCCCEEEEeeecCCCceEEEEeccCCcccCC--CC---ccccCcceeeeccCCHHHHHHHHHHHHHHHhcCCcccH
Confidence 853 4579999999999999999999998653211 00 11223579999999999999999999999999888899
Q ss_pred HHHHHHHHhcCCCCCcEEEEEeCCHHHHHHHHHHhhcc
Q psy616 1102 ENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNS 1139 (1152)
Q Consensus 1102 ~d~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~ 1139 (1152)
.|+||||+++|+||+||+++++++. ||++.|+.+..+
T Consensus 500 ~d~~~tl~~~r~~~~~r~~~~~~~~-~l~~~l~~~~~~ 536 (917)
T 2hg4_A 500 RDTGFTLATRRSAWEHRAVVVGDRD-EALAGLRAVADG 536 (917)
T ss_dssp HHHHHHHHHSSCCCSEEEEEEESHH-HHHHHHHHHHHT
T ss_pred HHHHHHHHhchhcccceEEEEeCCH-HHHHHHHHHhcc
Confidence 9999999999999999999999999 999999887654
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-98 Score=972.52 Aligned_cols=779 Identities=14% Similarity=0.158 Sum_probs=580.5
Q ss_pred CCCEEEEECCchh-HHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHH----HhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGR-LGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKL----KKFNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 235 ~~~~~LITGg~gG-IG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l----~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
.++++|||||++| ||+++|++|+++|++++++.+|+. ..++..+++ ...|.++.++.||++|.++++++++++.
T Consensus 651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~ 730 (1878)
T 2uv9_A 651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY 730 (1878)
T ss_dssp TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 5799999999999 999999999999986444445653 223333333 3347889999999999999999999999
Q ss_pred hh---cC-CeeEEEEcccccCcCc-ccccCC--HHHHHHHHhhhchHHHHHHHH--HHHHHHHhcCCCCCEEEEecCCcc
Q psy616 309 NN---IG-PIDGVLHIAGISGLTS-NILEAN--YKNFYSVLSSKISGTIALNYA--LENTILKLQKNKLDFVCYFSSSSA 379 (1152)
Q Consensus 309 ~~---~G-~idgvIh~AG~~~~~~-~~~~~~--~e~~~~~~~~kv~g~~~L~~~--~~p~m~~~~~~~~~~iV~~SS~a~ 379 (1152)
++ || +||+||||||+.. .. ++.+++ .++|+++|++|+.|+++++++ +.|.| ...+.++||++||+++
T Consensus 731 ~~~~~~G~~IDiLVnNAGi~~-~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M---~~~~~G~IVnISS~ag 806 (1878)
T 2uv9_A 731 DTKNGLGWDLDYVVPFAAIPE-NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGY---ETRPAQVILPLSPNHG 806 (1878)
T ss_dssp CSSSSCCCCCSEEEECCCCCC-TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC---CSCCEEECCEECSCSS
T ss_pred HhhcccCCCCcEEEeCccccc-CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHH---HhCCCCEEEEEcchhh
Confidence 98 99 9999999999987 66 888998 899999999999999999987 55654 3334578999999999
Q ss_pred ccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHH
Q psy616 380 ILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFE 459 (1152)
Q Consensus 380 ~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~ 459 (1152)
..| +++.|+++|+++++|++.+..+.+.. .+++.+|.||.+.+++|.... ..........+++.++++++...+.
T Consensus 807 ~~g--g~~aYaASKAAL~aLt~~laAeEla~--~IrVNaVaPG~V~gT~m~~~~-~~~~~~~~~~plr~~sPeEVA~avl 881 (1878)
T 2uv9_A 807 TFG--NDGLYSESKLALETLFNRWYSESWGN--YLTICGAVIGWTRGTGLMSAN-NLVAEGVEKLGVRTFSQQEMAFNLL 881 (1878)
T ss_dssp SSS--CCSSHHHHHHHHTTHHHHHHHSTTTT--TEEEEEEEECCBCCTTSCSHH-HHTHHHHHTTTCCCBCHHHHHHHHH
T ss_pred ccC--CchHHHHHHHHHHHHHHHHHHHHcCC--CeEEEEEEecceecCcccccc-hhhHHHHHhcCCCCCCHHHHHHHHH
Confidence 988 58899999999999998776654422 279999999977647775431 1112234456667789999999988
Q ss_pred HHHhcCc-----eeeeeec--hhhhH---HHHHHhhcC----------cC-----------------------c--cccc
Q psy616 460 QLLIQDK-----IQYLVLS--GELEK---LNQIINNIA----------PK-----------------------V--SENK 494 (1152)
Q Consensus 460 ~~l~~~~-----~~~~v~~--~~~~~---~~~~~~~~~----------~~-----------------------~--~~~~ 494 (1152)
.++.... .+.++++ +.+.. +...+..+. .. . ....
T Consensus 882 fLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~lr~~l~~~~~~~~al~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1878)
T 2uv9_A 882 GLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKLRKEIMETSAIRQAVIKETAIENKVVNGEDHEALYRRVITEPRA 961 (1878)
T ss_dssp HHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCC
T ss_pred HHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHHHHhccccchhhhhhcccccchhcccccccccccccccccchhh
Confidence 8765432 2444432 22211 111100000 00 0 0000
Q ss_pred ccc--ccchhHHHHHHHHHHHHHHhCC-CCcccccCCCccccC---------------------CchH------------
Q psy616 495 KIN--NFNIEKFIENDIKNHICNILNT-KKSEIYKNKNLADYG---------------------FDSI------------ 538 (1152)
Q Consensus 495 ~~~--~~~~~~~~~~~l~~~ia~~L~~-~~~~i~~~~~f~elG---------------------lDSL------------ 538 (1152)
... .....+. ...++.....+.++ +.+++.....|.++| +++|
T Consensus 962 ~l~~~~p~l~~~-~~~~~~l~~~l~~~~dl~~~~vv~g~~e~g~~g~~rtr~~~e~~g~~s~~g~~ela~~mgli~~~~~ 1040 (1878)
T 2uv9_A 962 NLKYPFPELPDW-DKDIKPLNDQLRGMVNLDKVVVVTGLAEIGPWGNARTRWEMEAYGKFSLEGCVEMAWMMGLIKNHNG 1040 (1878)
T ss_dssp CCCCCCCCCCCC-CCCCHHHHHHHTTCSCTTSCEEECCCEEEETTEEHHHHHHHHHTSSCCHHHHHHHHHHTTSEEEEEE
T ss_pred hhcccCCCcchh-hhhhhhHHHHHhhhhhhhhcceeeccCccCcccccchhhHhhhhhhhhHhhHHHHHHHhchhhhccc
Confidence 000 0000000 00011111122222 223333334444433 2222
Q ss_pred -----------------------HHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhhhhhhhhhccCCCCcccc
Q psy616 539 -----------------------SLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPLKTES 595 (1152)
Q Consensus 539 -----------------------~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~~~~~~~~~~~~~~~~~~ 595 (1152)
+..+++++|..+.|+.++.+.+|++||...+ .++. +.. ......+
T Consensus 1041 ~~~~~~~~gw~d~~~~~~v~~~~i~~~~~~~i~~~tgir~~~~~~fd~~~p~~~-~~~~----~~~----~~~~~~~--- 1108 (1878)
T 2uv9_A 1041 PLKGKPYSGWVDAKTGEPVDDKDVKAKYEKYILEHSGIRLIEPELFGGYDPNRK-QLLQ----EVV----IEQDLEP--- 1108 (1878)
T ss_dssp ESSSSEEEEEEESSSCCBCCHHHHHHHHHHHHHHTSEEEECCGGGGTTCCGGGE-EEEE----EEE----CCSCCCC---
T ss_pred cccccccccccccccCCccchhhhHHHHHHHHHHhcCCCCCcccccCCCCHHHH-HHHH----Hhh----cccCCCc---
Confidence 2336678888888888888888888888764 1110 000 0000000
Q ss_pred cccccccccccccccccccccccccccCCCCCCCCCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCccccccccc
Q psy616 596 KNISILYDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLY 675 (1152)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~ 675 (1152)
+........... ....++|+|+. ..++++||++|.+|++++.+.+.
T Consensus 1109 --------------~~~~~~~a~~~~-----~~~~~~~~i~~-------~~~~~~~w~~L~~G~~~i~p~~~-------- 1154 (1878)
T 2uv9_A 1109 --------------FEASKEQAEEFK-----REHGDKVEIFE-------IPETGQYTVRLRKGATLLIPKAL-------- 1154 (1878)
T ss_dssp --------------EEECHHHHHHHH-----HHHGGGEEEEE-------CTTTSCEEEEECTTCEEEEEEEE--------
T ss_pred --------------cccChhhhhhcc-----ccCCCCeeEee-------CCChHHHHHHHHcCCCeeeecCC--------
Confidence 000000000000 01246788873 36678999999999999987321
Q ss_pred ccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHHHhhcCCHHHHHHHHHHHHHHHhcCCC-CCC----CCCCceEEEEE
Q psy616 676 YENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYG-PNQ----IANQKIGMFVG 750 (1152)
Q Consensus 676 ~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ea~~mdpq~rl~L~~a~~AledAG~~-~~~----l~~~~~gv~~g 750 (1152)
+.+.+++|+++ +.||+.||||++++++.||||+|++|+++||||+||||+ +.+ ++++++|||+|
T Consensus 1155 ---------~~~~~~aG~i~--~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vG 1223 (1878)
T 2uv9_A 1155 ---------QFDRLVAGQIP--TGWDARRYGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIG 1223 (1878)
T ss_dssp ---------CCSCCEEEECC--TTCCHHHHTCCHHHHHHSCHHHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEE
T ss_pred ---------CCcceEEEEeC--CCCCHhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEc
Confidence 23457889997 479999999999999999999999999999999999998 666 78999999999
Q ss_pred eccCCch------h-----ccccccccccchhhHHHHHHHH-HcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEE
Q psy616 751 VEEGSNY------Q-----DRLDQVNLTSTHNAILSARLAY-FMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAI 818 (1152)
Q Consensus 751 ~~~~~~~------~-----~~~~~~~~~~~~~~~~a~ris~-~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~al 818 (1152)
++.+++. . ....+..++++..|++++||++ +||++||+++|++|||||++|||+||++|++|+||+||
T Consensus 1224 sg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP~~tv~tACASsl~Al~~A~~~I~sG~adval 1303 (1878)
T 2uv9_A 1224 SGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCL 1303 (1878)
T ss_dssp ESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHTCCCCCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEE
T ss_pred cCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHhcCCCCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEE
Confidence 9877631 1 1134455667788999999999 59999999999999999999999999999999999999
Q ss_pred EeccccCcCHHHHHHHHhcCCCC-----------CCCCcccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEE
Q psy616 819 SAGVNLMISPEAYIAMTSAGMLS-----------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGS 887 (1152)
Q Consensus 819 vgGv~~~~~~~~~~~~~~~g~ls-----------~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~ 887 (1152)
|||++. +++..+..|..++++| |++.|||||.++|||++|||+|++||+++++|+++|++|||+|+|+
T Consensus 1304 vGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~ 1382 (1878)
T 2uv9_A 1304 VGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMT 1382 (1878)
T ss_dssp EEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEE
T ss_pred Eeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCCCcccceeEEEEEeeHHHHHHCCCceEEEEEEE
Confidence 999998 7899999999999999 7899999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCCC----------------H------------------------------------------------
Q psy616 888 GINYDGKTNGITAPN----------------G------------------------------------------------ 903 (1152)
Q Consensus 888 a~~~dG~~~~~~~P~----------------~------------------------------------------------ 903 (1152)
++|+||.+.++++|+ +
T Consensus 1383 a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 1462 (1878)
T 2uv9_A 1383 STATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFD 1462 (1878)
T ss_dssp EEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCC
T ss_pred EEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccc
Confidence 999999988887772 1
Q ss_pred ---HHHH-------------------------------HHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh
Q psy616 904 ---ISQT-------------------------------ELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVF 949 (1152)
Q Consensus 904 ---~~q~-------------------------------~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f 949 (1152)
.+|+ ++|++||+++|++|+||+|||+|||||++||++|.++|.++|
T Consensus 1463 ~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f 1542 (1878)
T 2uv9_A 1463 ETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQL 1542 (1878)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHH
Confidence 2454 899999999999999999999999999999999999999999
Q ss_pred cc-cCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccc-cCCCCeeeccccccccccCCC
Q psy616 950 KN-KTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LKNSPFYINKSNKKWNTVNEK 1027 (1152)
Q Consensus 950 ~~-~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~-~~~~~~~v~~~~~~w~~~~~~ 1027 (1152)
+. .+...++|+|+|+|+|+||+++|||+++++|++++|+||+|||++|+++|||.++ ++. +.++.+..+| ..
T Consensus 1543 ~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~i~~~~~--v~~~~~~~~~----~~ 1616 (1878)
T 2uv9_A 1543 KHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDY--IVYPSRSIKT----DG 1616 (1878)
T ss_dssp HHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGGGGGCTT--EECCSSCEEC----SC
T ss_pred hhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCccccccc--cccccccccC----CC
Confidence 86 3444567999999999999999999999999999999999999999999999984 442 4445655555 24
Q ss_pred ccEEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEEEEeecCCHHHHHHHHHHHHHHHHhC
Q psy616 1028 LRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN 1096 (1152)
Q Consensus 1028 ~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~ 1096 (1152)
+|+++||||||||+|+|+||++++..... .. ...+-..++|.+..+++..+.+.+.+..+
T Consensus 1617 ~r~a~v~SFGFGG~NahvIle~p~~~~~~-l~--------~~~~~~y~~r~~~r~~~~~~~~~~~~~~~ 1676 (1878)
T 2uv9_A 1617 IKAFSVTSFGFGQKGAQAIGVHPKYLFAT-LD--------KAQYEAYCVKVQARQKKAYRFFHNGLINN 1676 (1878)
T ss_dssp CCEEEEEEEETTTEEEEEEEECTHHHHTT-SC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEccCCCCCeeEEEEEecCCcchhh-cC--------HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 68999999999999999999986532110 00 11233567778888888888888777755
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-97 Score=970.86 Aligned_cols=777 Identities=14% Similarity=0.152 Sum_probs=574.8
Q ss_pred CCCEEEEECCchh-HHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHH----HhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGR-LGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKL----KKFNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 235 ~~~~~LITGg~gG-IG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l----~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
.++++|||||++| ||+++|++|+++|++++++.+|+. ..++..+++ ...|.++.+++||++|.++++++++++.
T Consensus 674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~ 753 (1887)
T 2uv8_A 674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY 753 (1887)
T ss_dssp TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 5799999999998 999999999999986555546654 333444444 2337789999999999999999999999
Q ss_pred hh-----cC-CeeEEEEcccccCcCc-ccccCC--HHHHHHHHhhhchHHHHHHHHH--HHHHHHhcCCCCCEEEEecCC
Q psy616 309 NN-----IG-PIDGVLHIAGISGLTS-NILEAN--YKNFYSVLSSKISGTIALNYAL--ENTILKLQKNKLDFVCYFSSS 377 (1152)
Q Consensus 309 ~~-----~G-~idgvIh~AG~~~~~~-~~~~~~--~e~~~~~~~~kv~g~~~L~~~~--~p~m~~~~~~~~~~iV~~SS~ 377 (1152)
++ +| +||+||||||+.. .. ++.+.+ .++|+++|++|+.|++++++++ .|.| ...+.+.||++||+
T Consensus 754 ~~~~~~G~G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m---~~~~~G~IVnISS~ 829 (1887)
T 2uv8_A 754 DTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGI---ETRPAQVILPMSPN 829 (1887)
T ss_dssp SCTTTTSCCCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC---CSCCEEEEEEECSC
T ss_pred HhccccccCCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhh---hhCCCCEEEEEcCh
Confidence 98 77 9999999999987 66 888998 8999999999999999999987 5554 23345789999999
Q ss_pred ccccCCCCChhhhHHHHHHHHH-HHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHH
Q psy616 378 SAILGDFGSCDYAMGNRFQTVY-AKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLK 456 (1152)
Q Consensus 378 a~~~g~~g~~~Yaaana~l~~l-a~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~ 456 (1152)
++..| +++.|+++|+++++| ++.++.+.. .. +++.+|.||.+.+++|..... .........+++.++|+|+..
T Consensus 830 ag~~g--g~~aYaASKAAL~~Lttr~lA~ela--~~-IrVNaV~PG~V~tT~m~~~~~-~~~~~~~~~plr~~sPEEVA~ 903 (1887)
T 2uv8_A 830 HGTFG--GDGMYSESKLSLETLFNRWHSESWA--NQ-LTVCGAIIGWTRGTGLMSANN-IIAEGIEKMGVRTFSQKEMAF 903 (1887)
T ss_dssp TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCT--TT-EEEEEEEECCEECC-----CC-TTHHHHHTTSCCCEEHHHHHH
T ss_pred HhccC--CCchHHHHHHHHHHHHHHHHHHHhC--CC-eEEEEEEecccccccccccch-hHHHHHHhcCCCCCCHHHHHH
Confidence 99988 788999999999999 777766532 22 899999999887567754321 122234455667789999999
Q ss_pred HHHHHHhcC-----ceeeeeec--hhhh------HHHH--------------HHhh-------c-CcCcc----------
Q psy616 457 LFEQLLIQD-----KIQYLVLS--GELE------KLNQ--------------IINN-------I-APKVS---------- 491 (1152)
Q Consensus 457 ~l~~~l~~~-----~~~~~v~~--~~~~------~~~~--------------~~~~-------~-~~~~~---------- 491 (1152)
.+..++... ..+.+.++ +.+. .... .... . .....
T Consensus 904 avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~lr~~l~~~~~~~~a~~~e~~~~~~~~~~~~~~~~~~~~~~~ 983 (1887)
T 2uv8_A 904 NLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLRKELVETSEVRKAVSIETALEHKVVNGNSADAAYAQVEIQ 983 (1887)
T ss_dssp HHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTSSCCEEC
T ss_pred HHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHHHHHhhhhhhhhhhhhhccchhhcccccccccccccccccc
Confidence 998776543 12444332 2221 1000 0000 0 00000
Q ss_pred cccccc--ccchhHHHHHHHHHHH-HHHhCC-CCcccccCCCccccCC--------------------------------
Q psy616 492 ENKKIN--NFNIEKFIENDIKNHI-CNILNT-KKSEIYKNKNLADYGF-------------------------------- 535 (1152)
Q Consensus 492 ~~~~~~--~~~~~~~~~~~l~~~i-a~~L~~-~~~~i~~~~~f~elGl-------------------------------- 535 (1152)
...... .....+ . +.++..- .++.|+ +.+++.+...|.++|-
T Consensus 984 ~~~~~~~~~p~l~~-~-~~i~~~~~~~l~g~~dl~~~~vi~gf~e~gp~g~srtR~~~e~~g~~s~~~~~elA~~mgli~ 1061 (1887)
T 2uv8_A 984 PRANIQLDFPELKP-Y-KQVKQIAPAELEGLLDLERVIVVTGFAEVGPWGSARTRWEMEAFGEFSLEGCVEMAWIMGFIS 1061 (1887)
T ss_dssp CCCCCCCCCCCCCC-H-HHHHHHSCGGGTTTSCGGGCEEEEEEEEEBTTBSHHHHHHHHHHSSCCHHHHHHHHHHTTSEE
T ss_pred chhhhcccCCCCcc-h-hhhhhcchHhhhcccchhhcceeeeccccCccccchhhhhhhhccccchhhHHHHHHHhchhh
Confidence 000000 000000 0 1121111 122222 4444445555666652
Q ss_pred ------------------------chHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhhhhhhhhhccCCCC
Q psy616 536 ------------------------DSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPL 591 (1152)
Q Consensus 536 ------------------------DSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~~~~~~~~~~~~~~ 591 (1152)
|+-+..+++++|..+.|+.++.+++|++++... .++|.+.+. . ....
T Consensus 1062 ~~~~~~~~~~~~gw~d~~t~~~v~~~~i~~~~~~~i~~~tgir~~~~~~fd~~~p~~-~~~l~~~~~-------~-~~~~ 1132 (1887)
T 2uv8_A 1062 YHNGNLKGRPYTGWVDSKTKEPVDDKDVKAKYETSILEHSGIRLIEPELFNGYNPEK-KEMIQEVIV-------E-EDLE 1132 (1887)
T ss_dssp EEEEEETTEEEEEEEETTTCCBCCHHHHHHHHHHHHHHTSSEEECCGGGGTTCCTTS-EEEEEEEEC-------S-SCCC
T ss_pred hccccccccCCccccccccCCccchhhhHHHHHHHHHHhcCCCCCCcccCCCCCHHH-HHHHHHHHh-------c-cccc
Confidence 222334456666667777776667777766643 111111000 0 0000
Q ss_pred cccccccccccccccccccccccccccccccCCCCCCCCCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCccccc
Q psy616 592 KTESKNISILYDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFD 671 (1152)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~ 671 (1152)
+ ++.......... ....++|+|++ ..++++||++|.+|++++.+.+.
T Consensus 1133 ~-----------------~~~~~~~a~~~~-----~~~~~~~~I~~-------~~~~~~~w~~L~~G~~~i~p~~~---- 1179 (1887)
T 2uv8_A 1133 P-----------------FEASKETAEQFK-----HQHGDKVDIFE-------IPETGEYSVKLLKGATLYIPKAL---- 1179 (1887)
T ss_dssp C-----------------EEECHHHHHHHH-----HHHGGGEEEEE-------CTTTSCEEEEECTTCEEEEEEEE----
T ss_pred c-----------------cccCccchhhHh-----hcCCCceeEee-------cCchHHHHHHHHcCCceeecccC----
Confidence 0 000000000000 01247788885 35678999999999999988532
Q ss_pred ccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHHHhhcCCHHHHHHHHHHHHHHHhcCCC-CCC----CCCCceE
Q psy616 672 WKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYG-PNQ----IANQKIG 746 (1152)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ea~~mdpq~rl~L~~a~~AledAG~~-~~~----l~~~~~g 746 (1152)
+.+.+++|+++ +.||+.||||++++++.||||+|++|+++||||+||||+ +.+ +++.++|
T Consensus 1180 -------------~~~~~~aG~i~--~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vG 1244 (1887)
T 2uv8_A 1180 -------------RFDRLVAGQIP--TGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVG 1244 (1887)
T ss_dssp -------------CCSCCEEECCC--TTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEE
T ss_pred -------------CCCccEEEEEC--CCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCChhhhhcccCCceeE
Confidence 22457889997 479999999999999999999999999999999999995 666 7899999
Q ss_pred EEEEeccCCchh-----------ccccccccccchhhHHHHHHHH-HcCCCCCcccccccchhHHHHHHHHHHHHHcCCC
Q psy616 747 MFVGVEEGSNYQ-----------DRLDQVNLTSTHNAILSARLAY-FMDLKGPVMAINTACSSSLVATHIACQSLRQHEC 814 (1152)
Q Consensus 747 v~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~a~ris~-~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~ 814 (1152)
||+|++.+++.. ....+..++++..+++++||++ +||++||+++|++|||||++|||+||++|++|+|
T Consensus 1245 v~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~lgl~GP~~tv~tACASsl~Al~~A~~~I~sG~a 1324 (1887)
T 2uv8_A 1245 NCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKA 1324 (1887)
T ss_dssp ECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHTTCCCSCCCCCCCGGGHHHHHHHHHHHHHHTTSC
T ss_pred EEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHHcCCccceEEeecccccHHHHHHHHHHHHHcCCC
Confidence 999998765311 1122334455667899999999 5999999999999999999999999999999999
Q ss_pred CEEEEeccccCcCHHHHHHHHhcCCCC-----------CCCCcccCCCCCCCcccccccEEEEEcccchhhcCCCceEEE
Q psy616 815 DTAISAGVNLMISPEAYIAMTSAGMLS-----------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAI 883 (1152)
Q Consensus 815 d~alvgGv~~~~~~~~~~~~~~~g~ls-----------~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~av 883 (1152)
|+|||||++. ++|..+..|..++++| |++.|||||.++|||++|||+|++|||++++|+++|++|||+
T Consensus 1325 dvaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~av 1403 (1887)
T 2uv8_A 1325 RICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGI 1403 (1887)
T ss_dssp SEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEE
T ss_pred CEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCCcccccceEEEEEccHHHHHHCCCceEEE
Confidence 9999999998 7899999999999999 789999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCC------------------HH-----------------------------------------
Q psy616 884 IRGSGINYDGKTNGITAPN------------------GI----------------------------------------- 904 (1152)
Q Consensus 884 I~g~a~~~dG~~~~~~~P~------------------~~----------------------------------------- 904 (1152)
|+|+++|+||.+.++++|+ +.
T Consensus 1404 I~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~ 1483 (1887)
T 2uv8_A 1404 VAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQN 1483 (1887)
T ss_dssp EEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCH
T ss_pred EeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchh
Confidence 9999999999887776664 21
Q ss_pred --HH-------------------------------HHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcc
Q psy616 905 --SQ-------------------------------TELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKN 951 (1152)
Q Consensus 905 --~q-------------------------------~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~ 951 (1152)
+| .++|++||+++|++|+||+|||+|||||++||++|.++|.++|+.
T Consensus 1484 ~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~ 1563 (1887)
T 2uv8_A 1484 EFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKH 1563 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhh
Confidence 45 379999999999999999999999999999999999999999985
Q ss_pred -cCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccc-cCCCCeeeccccccccccCCCcc
Q psy616 952 -KTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LKNSPFYINKSNKKWNTVNEKLR 1029 (1152)
Q Consensus 952 -~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~-~~~~~~~v~~~~~~w~~~~~~~r 1029 (1152)
.+...++|+|+|+|+|+||+++|||+++++|++++|+||+|||++|+++|||.++ ++ .+.++.+.++|. .+|
T Consensus 1564 ~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp~l~~~~--~l~~~~~~~~~~----~~r 1637 (1887)
T 2uv8_A 1564 LGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFE--YVLYPSKTLKTD----GVR 1637 (1887)
T ss_dssp HTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCGGGGGCT--TEECCSSCEECS----CCC
T ss_pred hccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCCcccccc--ccccccccccCC----CCC
Confidence 3334567999999999999999999999999999999999999999999999985 43 566788888883 468
Q ss_pred EEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEEEEeecCCHHHHHHHHHHHHHHHHhC
Q psy616 1030 IGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKN 1096 (1152)
Q Consensus 1030 ~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~ 1096 (1152)
+++||||||||+|+|+||++++..... .. ...+-..++|.+..+++..+.+.+.+..+
T Consensus 1638 ~a~v~SFGFGG~NahvIle~p~~~~~~-l~--------~~~~~~y~~r~~~r~~~~~~~~~~~~~~~ 1695 (1887)
T 2uv8_A 1638 AVSITSFGFGQKGGQAIVVHPDYLYGA-IT--------EDRYNEYVAKVSAREKSAYKFFHNGMIYN 1695 (1887)
T ss_dssp EEEEEEEETTTEEEEEEEECTHHHHTT-SC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEEccCCCCCccEEEEEecCCchhhc-cC--------HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999986532110 00 11233466777777777777777777654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-100 Score=959.59 Aligned_cols=743 Identities=14% Similarity=0.161 Sum_probs=545.4
Q ss_pred CCCEEEEECCchh-HHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHh----CCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGR-LGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKK----FNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 235 ~~~~~LITGg~gG-IG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~----~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
.++++|||||++| ||+++|++|+++|++++++.+|+. ..++..+++.+ .|.++.+++||++|.++++++++++.
T Consensus 475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~ 554 (1688)
T 2pff_A 475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY 554 (1688)
T ss_dssp CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 5799999999998 999999999999997666656653 33444455522 36789999999999999999999999
Q ss_pred hh-----cC-CeeEEEEcccccCcCc-ccccCC--HHHHHHHHhhhchHHHHHHHHH--HHHHHHhcCCCCCEEEEecCC
Q psy616 309 NN-----IG-PIDGVLHIAGISGLTS-NILEAN--YKNFYSVLSSKISGTIALNYAL--ENTILKLQKNKLDFVCYFSSS 377 (1152)
Q Consensus 309 ~~-----~G-~idgvIh~AG~~~~~~-~~~~~~--~e~~~~~~~~kv~g~~~L~~~~--~p~m~~~~~~~~~~iV~~SS~ 377 (1152)
++ +| +||+||||||+.. .. ++.+.+ .++|++++++|+.|++++.+++ .|.|+ ..+.+.||++||+
T Consensus 555 e~~~~~GfG~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~---krggGrIVnISSi 630 (1688)
T 2pff_A 555 DTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIE---TRPAQVILPMSPN 630 (1688)
T ss_dssp SCTTSSSCCCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCT---TSCEEECCCCCSC
T ss_pred HhccccccCCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHH---hCCCCEEEEEECh
Confidence 98 88 9999999999977 56 788888 9999999999999999999998 66643 3345789999999
Q ss_pred ccccCCCCChhhhHHHHHHHHH-HHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHH
Q psy616 378 SAILGDFGSCDYAMGNRFQTVY-AKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLK 456 (1152)
Q Consensus 378 a~~~g~~g~~~Yaaana~l~~l-a~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~ 456 (1152)
++..| +++.|+++|+++++| ++.++.+ +. ..+++.+|.||.|.+++|..... .........+++.++|+|++.
T Consensus 631 AG~~G--g~saYaASKAAL~aLttrsLAeE-la--~~IRVNaVaPG~V~TT~M~~~~e-~~~~~l~~iplR~~sPEEVA~ 704 (1688)
T 2pff_A 631 HGTFG--GDGMYSESKLSLETLFNRWHSES-WA--NQLTVCGAIIGWTRGTGLMSANN-IIAEGIEKMGVRTFSQKEMAF 704 (1688)
T ss_dssp TTTSS--CBTTHHHHHHHHTHHHHHTTTSS-CT--TTEECCCCCCCCCCCCSSSCTTT-TCSTTTSSSSCCCCCCCTTHH
T ss_pred HhccC--CchHHHHHHHHHHHHHHHHHHHH-cC--CCeEEEEEEECcCcCCcccCCch-HHHHHHHhCCCCCCCHHHHHH
Confidence 99987 788999999999999 4444443 21 12788899999887667754311 111223344556779999999
Q ss_pred HHHHHHhcC-----ceeeeeec--hhhhH---HHHHHhh--------------c-----------CcCccc---------
Q psy616 457 LFEQLLIQD-----KIQYLVLS--GELEK---LNQIINN--------------I-----------APKVSE--------- 492 (1152)
Q Consensus 457 ~l~~~l~~~-----~~~~~v~~--~~~~~---~~~~~~~--------------~-----------~~~~~~--------- 492 (1152)
.+..++... ..+.+.++ +.+.. +...... . ......
T Consensus 705 aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella~lr~~L~e~seir~al~~e~a~e~~l~~g~~~~~~~~~~~~~ 784 (1688)
T 2pff_A 705 NLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLRKELVETSEVRKAVSIETALEHKVVNGNSADAAYAQVEIQ 784 (1688)
T ss_dssp HHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCC-----
T ss_pred HHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHHHHHHhhhcccHHHHhhhcccchhhccccccccccccccCCCC
Confidence 998877554 13444433 32211 0000000 0 000000
Q ss_pred -ccccc--ccchhHHHHHHHHHHH-HHHhCC-CCcccccCCCccccC---------------CchH-HHHHH--------
Q psy616 493 -NKKIN--NFNIEKFIENDIKNHI-CNILNT-KKSEIYKNKNLADYG---------------FDSI-SLAEF-------- 543 (1152)
Q Consensus 493 -~~~~~--~~~~~~~~~~~l~~~i-a~~L~~-~~~~i~~~~~f~elG---------------lDSL-~aveL-------- 543 (1152)
..... .....+ . +.++..- .++.++ +.+++-.-..|.++| -+|+ ..+||
T Consensus 785 ~~a~l~~~fp~l~~-~-~~l~~l~~~~l~g~~dl~~v~vV~Gf~e~gp~G~srtR~emE~~g~ls~e~~vELAw~mgLi~ 862 (1688)
T 2pff_A 785 PRANIQLDFPELKP-Y-KQVKQIAPAELEGLLDLERVIVVTGFAEVGPWGSARTRWEMEAFGEFSLEGCVEMAWIMGFIS 862 (1688)
T ss_dssp CCCCCCCCCCCCCC-C-TTHHHHTTTTTCSSSSCSSCEEEEEEEECSSSSTTTHHHHHHHSSCCHHHHHHHHHHSTTSCC
T ss_pred hhhhhccCCCCCCc-h-hhhccccHHHHhcccchhhceEEeccCCCCcccCccchhhhhhcccccHHHHHHHHHHhCcce
Confidence 00000 000000 0 0011000 111122 222222223344433 2333 33343
Q ss_pred --------------------------------HHHHHHhcCcccCceecccCCCHHHHHHHHHHhhhhhhhhhhccCCCC
Q psy616 544 --------------------------------SRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPL 591 (1152)
Q Consensus 544 --------------------------------~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~~~~~~~~~~~~~~ 591 (1152)
+++|....|+.++.+++|++|+... .++|.+... ... ..
T Consensus 863 ~~~g~~~g~p~~gWvd~~tgepv~d~~i~~~~~~~i~~~tGiRl~~~~~fd~~~p~~-~~~L~e~~l-------~~d-~~ 933 (1688)
T 2pff_A 863 YHNGNLKGRPYTGWVDSKTKEPVDDKDVKAKYETSILEHSGIRLIEPELFNGYNPEK-KEMIQEVIV-------EED-LE 933 (1688)
T ss_dssp CCSTTTTCSSSSCCCSCCSSSSTTSCCCTTTSSSSSSSGGGTTTSSSSCCSSSSSSC-CSSSEECCC-------CCC-CS
T ss_pred eccccccCCCCccceecCCCCccchhHHHHHHHHHHHHhcCCCCCCCccCCCCCHHH-HhHhhHHhc-------CCC-Cc
Confidence 4445555566666666666665543 122211000 000 00
Q ss_pred cccccccccccccccccccccccccccccccCCCCCCCCCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCccccc
Q psy616 592 KTESKNISILYDNKINENYENVSKKSNFILNKNTDINSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFD 671 (1152)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~ 671 (1152)
.+........... ....++|+|++ ..++++||++|.+|++++.+.+
T Consensus 934 -----------------~~~~s~~~a~~~~-----~~~~d~v~I~~-------i~~~eefW~~L~~G~~~i~p~~----- 979 (1688)
T 2pff_A 934 -----------------PFEASKETAEQFK-----HQHGDKVDIFE-------IPETGEYSVKLLKGATLYIPKA----- 979 (1688)
T ss_dssp -----------------CCCCCCCCTTHHH-----HHHHHSCTTSC-------CCCCCSSSCCCCCCTTCCCCCC-----
T ss_pred -----------------ccccChhhhhhcc-----ccCCCCeEEec-------CCCHHHHHHHHHcCCCEEecCC-----
Confidence 0000000000000 00124455553 3567899999999999998732
Q ss_pred ccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHHHhhcCCHHHHHHHHHHHHHHHhcCCC-CCC----CCCCceE
Q psy616 672 WKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYG-PNQ----IANQKIG 746 (1152)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ea~~mdpq~rl~L~~a~~AledAG~~-~~~----l~~~~~g 746 (1152)
.+.+.+++|+++ +.||+.||||++++++.||||+|++|+++|+||+||||+ +.+ ++++++|
T Consensus 980 ------------~~~~~~vaG~Ip--~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vG 1045 (1688)
T 2pff_A 980 ------------LRFDRLVAGQIP--TGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVG 1045 (1688)
T ss_dssp ------------CCEECCSSCSCC--CCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSC
T ss_pred ------------CCCCceEEEEEC--CCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHHcCCCChHHhccccCCceEE
Confidence 123456789987 379999999999999999999999999999999999998 665 7899999
Q ss_pred EEEEeccCCchh-----------ccccccccccchhhHHHHHHHH-HcCCCCCcccccccchhHHHHHHHHHHHHHcCCC
Q psy616 747 MFVGVEEGSNYQ-----------DRLDQVNLTSTHNAILSARLAY-FMDLKGPVMAINTACSSSLVATHIACQSLRQHEC 814 (1152)
Q Consensus 747 v~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~a~ris~-~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~ 814 (1152)
||+|++.+++.. ....+..+++...+++++||++ +||++||+++|++|||||++||++||++|++|+|
T Consensus 1046 V~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtACASSL~AL~lA~~aIrsGea 1125 (1688)
T 2pff_A 1046 NCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKA 1125 (1688)
T ss_dssp CCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCCCCCTTTTTHHHHHHHHHHHHTTTC
T ss_pred EEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHHcCCcCCeEEecCCCchHHHHHHHHHHHHHCCCC
Confidence 999988766321 1123334455667899999999 8999999999999999999999999999999999
Q ss_pred CEEEEeccccCcCHHHHHHHHhcCCCC-----------CCCCcccCCCCCCCcccccccEEEEEcccchhhcCCCceEEE
Q psy616 815 DTAISAGVNLMISPEAYIAMTSAGMLS-----------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAI 883 (1152)
Q Consensus 815 d~alvgGv~~~~~~~~~~~~~~~g~ls-----------~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~av 883 (1152)
|+|||||++. ++|..+..|..++++| |++.|||||.+++||++|||+|++||+++++|+++|++|||+
T Consensus 1126 DvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~GEGAGavVLesle~Al~~G~~IyAv 1204 (1688)
T 2pff_A 1126 RICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGI 1204 (1688)
T ss_dssp SCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCCSCCEEEEEECSHHHHSSSCCCCCE
T ss_pred CEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCccccceEEEEeCcHHHHHHCCCceEEE
Confidence 9999999998 5788888899999998 789999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCC------------------CHH-----------------------------------------
Q psy616 884 IRGSGINYDGKTNGITAP------------------NGI----------------------------------------- 904 (1152)
Q Consensus 884 I~g~a~~~dG~~~~~~~P------------------~~~----------------------------------------- 904 (1152)
|+|+++|+||.+.++++| |+.
T Consensus 1205 I~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~ 1284 (1688)
T 2pff_A 1205 VAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQN 1284 (1688)
T ss_dssp ECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHH
T ss_pred EEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchh
Confidence 999999999987665555 322
Q ss_pred --HH-------------------------------HHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcc
Q psy616 905 --SQ-------------------------------TELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKN 951 (1152)
Q Consensus 905 --~q-------------------------------~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~ 951 (1152)
+| .++|++||++||++|+||+|||+|||||++||++|.++|.++|+.
T Consensus 1285 ~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~ 1364 (1688)
T 2pff_A 1285 EFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKH 1364 (1688)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHHhh
Confidence 45 478999999999999999999999999999999999999999986
Q ss_pred -cCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccE
Q psy616 952 -KTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRI 1030 (1152)
Q Consensus 952 -~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~ 1030 (1152)
.+...++|+|+|+|+++||+++|||+++++|++++|++|+|||++|+++|||.++.. ..+.++.+.++|+ .+|+
T Consensus 1365 ~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~~~-d~v~~p~~~~~~~----~~r~ 1439 (1688)
T 2pff_A 1365 LGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQF-EYVLYPSKTLKTD----GVRA 1439 (1688)
T ss_dssp GCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCCSS-CCCCSCTTCCSSS----SSSC
T ss_pred hCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcC-CceeecCccccCC----CCcE
Confidence 333456799999999999999999999999999999999999999999999998521 2455578888884 4688
Q ss_pred EEEcCcCCCcceEEEEEccccc
Q psy616 1031 GAVSAFGMSGTNAHIVLQEYIS 1052 (1152)
Q Consensus 1031 a~v~sfG~gG~nah~il~~~~~ 1052 (1152)
++||||||||+|+|+||++++.
T Consensus 1440 AlVnSFGFGGtNAhvILe~p~~ 1461 (1688)
T 2pff_A 1440 VSITSFGFGQKGGQAIVVHPDY 1461 (1688)
T ss_dssp CCCCCCCSTTCCCCCCEECSSS
T ss_pred EEEeeECCCCeeEEEEEeCCCc
Confidence 9999999999999999998643
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-94 Score=919.59 Aligned_cols=469 Identities=30% Similarity=0.519 Sum_probs=418.6
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
.++|||||||||||++.++++||++|.+|+++++++| +||+...|.. ....|++++++.||+.||+|+|
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~-~~~~~~~~~~----------~~~~g~~~~~~~FD~~~f~i~~ 71 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDD-RRWKAGLYGL----------PRRSGKLKDLSRFDASFFGVHP 71 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSS-SSSCTTGGGC----------CSCEECCSCSSCCCTTTTTCCH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCC-cccccccccC----------cccccccCChhhcChhhcCCCH
Confidence 4789999999999999999999999999999999975 6888643321 1346889999999999999999
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhc------cccccccccchhhHHHHHHHHHcC
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD------RLDQVNLTSTHNAILSARLAYFMD 783 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~------~~~~~~~~~~~~~~~a~ris~~~~ 783 (1152)
+|++.||||||++|+++|||||||||+++++++.++|||+|++.++|... .+.++..+++..+++++||||+||
T Consensus 72 ~ea~~mDp~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lg 151 (965)
T 3hhd_A 72 KQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFD 151 (965)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHT
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999887765322 234455677788999999999999
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccE
Q psy616 784 LKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVV 863 (1152)
Q Consensus 784 l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~ 863 (1152)
|+||+++||||||||++|||+||++|++|+||+|||||+|++++|..+..|++.++|||+|+|||||.++|||++|||+|
T Consensus 152 l~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~~gEGag 231 (965)
T 3hhd_A 152 FRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVV 231 (965)
T ss_dssp CCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBCBBCEEE
T ss_pred CCCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCccccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccchhhcCCCceEEEEEEEEEecCCCC-CCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHH
Q psy616 864 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKT-NGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEI 942 (1152)
Q Consensus 864 ~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~-~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~ 942 (1152)
+||||++++|. +|||+|+|+++|+||.+ .++++|++.+|+++|++||++||++|+||+|||+|||||++||++|+
T Consensus 232 avvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~ 307 (965)
T 3hhd_A 232 AVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQEL 307 (965)
T ss_dssp EEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHH
T ss_pred EEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHH
Confidence 99999999996 59999999999999965 79999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccc-cCCCCeeeccccccc
Q psy616 943 NALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LKNSPFYINKSNKKW 1021 (1152)
Q Consensus 943 ~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~-~~~~~~~v~~~~~~w 1021 (1152)
+||.++|+... ..+|+|||+|+||||+++|||++++||++|+|+|++|||++||++|||.|+ +.+.+++++++.++|
T Consensus 308 ~Al~~~f~~~~--~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~ 385 (965)
T 3hhd_A 308 NGITRALCATR--QEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPV 385 (965)
T ss_dssp HHHHHHHCSSC--SSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEEC
T ss_pred HHHHHHhcccC--CCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCccC
Confidence 99999998643 457999999999999999999999999999999999999999999999998 688899999999999
Q ss_pred cccCCCccEEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEEEEeecCCHHHHHHHHHHHHHHHHhCCCC-C
Q psy616 1022 NTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTV-C 1100 (1152)
Q Consensus 1022 ~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~-~ 1100 (1152)
+. ++++||||||||+|+|+|||+++..... .......+++|++||+|+++|+++++++.++++..+.. .
T Consensus 386 ~~-----~~a~v~sfG~gG~Nah~il~~~~~~~~~-----~~~~~~~~~~~~~Sa~~~~~l~~~~~~~~~~~~~~~~~~~ 455 (965)
T 3hhd_A 386 RG-----GNVGINSFGFGGSNVHIILRPNTQPPPA-----PAPHATLPRLLRASGRTPEAVQKLLEQGLRHSQDLAFLSM 455 (965)
T ss_dssp CS-----CEEEEEEECTTSEEEEEEEEECCCCCCC-----CCGGGGSCEEEEEEESSHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred CC-----CeEEEecccCCCceEEEEeccCCccccc-----ccccccccceeecccCCHHHHHHHHHHHHhhhcccchhhH
Confidence 74 4689999999999999999998653211 11112345799999999999999999998887532211 2
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeCCHHH
Q psy616 1101 IENFVYTLMQGRHHFQYRCAIIISSIEE 1128 (1152)
Q Consensus 1101 l~d~a~tl~~~r~~~~~R~a~~~~~~~~ 1128 (1152)
+.|++|| +|.+++||.++++.+.++
T Consensus 456 ~~~~~~~---~~~~~~~r~~~~~~~~~~ 480 (965)
T 3hhd_A 456 LNDIAAV---PATAMPFRGYAVLGGERG 480 (965)
T ss_dssp HHHHCCC---CTTTCCEEEEEEESSSSC
T ss_pred HHHHHhh---hcccCcceEEEEecccch
Confidence 4566664 688999999988876544
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-93 Score=992.68 Aligned_cols=468 Identities=31% Similarity=0.520 Sum_probs=417.5
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|||||||||||++.++++||++|.+|++++++++ +||+...+ + ..+++|++++++.||+.||||+|+
T Consensus 2 ~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~-~~~~~~~~-~---------~~~~~g~~~~~~~fd~~~f~i~~~ 70 (2512)
T 2vz8_A 2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADD-RRWKAGLY-G---------LPRRMGKLKDLSRFDASFFGVHSK 70 (2512)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECS-SSSCTTGG-G---------CCSEEECCSCSSCCCTTTTTCCHH
T ss_pred CCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCC-cccccccc-c---------CcccceecCCcccCCHhhcCCCHH
Confidence 579999999999999999999999999999999954 78986532 2 124679999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhc------cccccccccchhhHHHHHHHHHcCC
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD------RLDQVNLTSTHNAILSARLAYFMDL 784 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~------~~~~~~~~~~~~~~~a~ris~~~~l 784 (1152)
|++.||||||++||++|||||||||+++++++++||||+|++.++|... ....+.++++..++++|||||+|||
T Consensus 71 ea~~~dpq~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l 150 (2512)
T 2vz8_A 71 QANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF 150 (2512)
T ss_dssp HHHTSCHHHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC
T ss_pred HHHhcCHHHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999987776432 2345677888999999999999999
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEE
Q psy616 785 KGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVA 864 (1152)
Q Consensus 785 ~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~ 864 (1152)
+|||+||||||||||+|||+||++|++|+||+|||||+|++++|..+..|+++|+|||+|+|||||+++|||++|||+|+
T Consensus 151 ~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~adG~~~gEG~~~ 230 (2512)
T 2vz8_A 151 KGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVA 230 (2512)
T ss_dssp CSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTCCCBCBBCEEEE
T ss_pred CCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCCCCcceeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccchhhcCCCceEEEEEEEEEecCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy616 865 VVLKRLSRALSDGDPIHAIIRGSGINYDGK-TNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 943 (1152)
Q Consensus 865 vvLk~l~~A~~dgd~i~avI~g~a~~~dG~-~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~ 943 (1152)
|||||+++|. +|||+|+|+++|+||+ +.++|+||+.+|+++|++||++||++|+||+|||+|||||++|||+|++
T Consensus 231 ~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~~E~~ 306 (2512)
T 2vz8_A 231 VLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELN 306 (2512)
T ss_dssp EEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHHHHHH
T ss_pred EEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCHHHHH
Confidence 9999999996 5999999999999996 5799999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccc-cCCCCeeecccccccc
Q psy616 944 ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LKNSPFYINKSNKKWN 1022 (1152)
Q Consensus 944 al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~-~~~~~~~v~~~~~~w~ 1022 (1152)
||.++|+..+ .++|+|||+|+||||+++|||++++||++|+|+||+|||++||++|||.|+ |++.+++++++.++|+
T Consensus 307 al~~~f~~~~--~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 384 (2512)
T 2vz8_A 307 GIVNALCATR--REPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIR 384 (2512)
T ss_dssp HHHHHHCSCS--SSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCBCC
T ss_pred HHHHHhcccC--CCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCccCC
Confidence 9999998643 357999999999999999999999999999999999999999999999997 9999999999999997
Q ss_pred ccCCCccEEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEEEEeecCCHHHHHHHHHHHHHHHHhCCCC-CH
Q psy616 1023 TVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNNTV-CI 1101 (1152)
Q Consensus 1023 ~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~-~l 1101 (1152)
. ++++||||||||+|+|+|||+++...... . .....++++++||+|+++|+.+++++.+++...... .+
T Consensus 385 ~-----~~a~vnsfG~gG~Nah~il~~~~~~~~~~----~-~~~~~~~~~~~sa~~~~~l~~~~~~~~~~~~~~~~~~~~ 454 (2512)
T 2vz8_A 385 G-----GNVGINSFGFGGSNVHVILQPNSRPAPPP----A-QHAALPRLLQASGRTLEAVQTLLEQGLRHSRDLAFVGML 454 (2512)
T ss_dssp S-----CCEEEEEEETTTEEEEEEEEECCCCCCCC----S-STTTCCEEEEEEESSHHHHHHHHHHHHTTTTCHHHHHHH
T ss_pred C-----CeEEEeccCCCCceeEEEEccCCcccccc----c-cccccceeeeecCCCHHHHHHHHHHHHhhhcccchhhHH
Confidence 3 46899999999999999999986432111 0 122345899999999999999999988775421110 13
Q ss_pred HHHHHHHHhcCCCCCcEEEEEeCCHHH
Q psy616 1102 ENFVYTLMQGRHHFQYRCAIIISSIEE 1128 (1152)
Q Consensus 1102 ~d~a~tl~~~r~~~~~R~a~~~~~~~~ 1128 (1152)
.|++| ++|.+++||.++++.+.++
T Consensus 455 ~~~~~---~~~~~~~~r~~~~~~~~~~ 478 (2512)
T 2vz8_A 455 NEIAA---VSPVAMPFRGYAVLGGEAG 478 (2512)
T ss_dssp HHHHC---CCTTTCCEEEEEEESSTTC
T ss_pred HHHHh---cccccCceeeeeeccCcch
Confidence 44443 4789999999777766443
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-89 Score=940.29 Aligned_cols=827 Identities=13% Similarity=0.145 Sum_probs=588.0
Q ss_pred CCCEEEEECCchh-HHHHHHHHHHHcCCcEEEEecCCcc-----hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGR-LGMLFSDYLINKYSTNLILSGRSKL-----NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 235 ~~~~~LITGg~gG-IG~~lA~~La~~Ga~~vil~~R~~~-----~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
.+|++|||||++| ||+++|+.|+++|++++++.++.+. .+++.+++...|.++.+++||++|+++++++++++.
T Consensus 2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~ 2214 (3089)
T 3zen_D 2135 XDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVG 2214 (3089)
T ss_dssp CCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 6899999999999 9999999999999966655444443 344555666668889999999999999999999999
Q ss_pred h----hcCCeeEEEEccccc----CcCcccccCCHHHHHHH----HhhhchHHHHHHHHHHHHHHHhcCCC-CCEEEEec
Q psy616 309 N----NIGPIDGVLHIAGIS----GLTSNILEANYKNFYSV----LSSKISGTIALNYALENTILKLQKNK-LDFVCYFS 375 (1152)
Q Consensus 309 ~----~~G~idgvIh~AG~~----~~~~~~~~~~~e~~~~~----~~~kv~g~~~L~~~~~p~m~~~~~~~-~~~iV~~S 375 (1152)
+ +||+||+||||||+. .......+.+.++|+++ +++|+.+++.+.+.+.+.|++..... ...++..|
T Consensus 2215 ~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~s 2294 (3089)
T 3zen_D 2215 TEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGS 2294 (3089)
T ss_dssp SCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEEC
T ss_pred hhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECC
Confidence 8 899999999999982 21123334455555544 99999999999999999987643322 23344555
Q ss_pred CCccccCCCCChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHH
Q psy616 376 SSSAILGDFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDG 454 (1152)
Q Consensus 376 S~a~~~g~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~ 454 (1152)
|..+.++ +.+.|+++|+++.+|++.++.+ .+ +.++++.+|.+|....++|...... ........+.+..+|+|.
T Consensus 2295 s~~g~~g--~~~aYsASKaAl~~LtrslA~E~~~--a~~IrVn~v~PG~v~tT~l~~~~~~-~~~~~~~~~~r~~~PeEI 2369 (3089)
T 3zen_D 2295 PNRGMFG--GDGAYGEAKSALDALENRWSAEKSW--AERVSLAHALIGWTKGTGLMGQNDA-IVSAVEEAGVTTYTTDEM 2369 (3089)
T ss_dssp SSTTSCS--SCSSHHHHGGGHHHHHHHHHHCSTT--TTTEEEEEEECCCEECSTTTTTTTT-THHHHGGGSCBCEEHHHH
T ss_pred cccccCC--CchHHHHHHHHHHHHHHHHHhcccc--CCCeEEEEEeecccCCCcccccchh-HHHHHHhcCCCCCCHHHH
Confidence 5554444 5678999999999999999998 33 3357888898877665776543222 222334456667799999
Q ss_pred HHHHHHHHhcCc-------eeeeeechhh-------hHHHHHHh----hcCcCcccc---cccccc--chhHHHHHHHHH
Q psy616 455 LKLFEQLLIQDK-------IQYLVLSGEL-------EKLNQIIN----NIAPKVSEN---KKINNF--NIEKFIENDIKN 511 (1152)
Q Consensus 455 ~~~l~~~l~~~~-------~~~~v~~~~~-------~~~~~~~~----~~~~~~~~~---~~~~~~--~~~~~~~~~l~~ 511 (1152)
..++..+++... +..+-++|.+ ..+..... ......... ...... .+.......+.
T Consensus 2370 A~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2448 (3089)
T 3zen_D 2370 AAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAREEMSGAADXXXXXXXXXXXXXXXXXXXXXXXXXXX- 2448 (3089)
T ss_dssp HHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-
T ss_pred HHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHHHhhhhhhhhccccccccccccccccccccccccc-
Confidence 999887654321 1112122222 21111100 000000000 000000 00000000000
Q ss_pred HHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhhhhhhhhhccCCCC
Q psy616 512 HICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNNTMIKFYRNKYPL 591 (1152)
Q Consensus 512 ~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~~~~~~~~~~~~~~ 591 (1152)
.|. -+.++.+++-+=..|.++|-= =.-|.+++.++..+++..-+.|-..+..|.+| +......|+..+.-+
T Consensus 2449 ~~~-~~~~~~~~~~vi~g~~~~~~~----g~~rt~~~~~~~~~~~~~~~~~la~~~gli~~----~~~~~~~w~d~~~~~ 2519 (3089)
T 3zen_D 2449 XXX-XXDVDPADLVVIVGGAELGPY----GSSRTRFEMEVSGELSAAGVLELAWTTGMVKW----EDDPKAGWYDTETGE 2519 (3089)
T ss_dssp CCC-STTSCGGGCEEEEEEEEEBTT----BSHHHHHHHHHTSSCCHHHHHHHHHHTTCEEE----ECSTTCEEEETTTCC
T ss_pred ccc-cccCCccceEEEEccccccCc----ccccchhhccccccchHHHHHHHHHHhcceee----ccCCCCCCEECCCCC
Confidence 000 011333333333455555521 02366677777555544333322222222111 111122333333222
Q ss_pred cccccccccccccccccccccccccccccccCC-CCCCCCC-cEEEEeeeeccC-CCCCHHHHHHHHHcCCcc--ccccC
Q psy616 592 KTESKNISILYDNKINENYENVSKKSNFILNKN-TDINSEE-LIAIIGMSGRFP-AARNINEFWKILINNKDV--ISEIP 666 (1152)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~IaIvGm~~~~P-~~~~~~~fw~~L~~g~~~--i~~~p 666 (1152)
+.+...+...+...+.+.. ..+...... ...+... ...-|-+.--++ .-.++++.|+...++.+. |.++|
T Consensus 2520 ~~~~~~i~~~~~~~i~~~~-----~ir~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~s~~~a~~~~~~~~~~~~i~~~~ 2594 (3089)
T 3zen_D 2520 LVPECEIVERYHDAVVERC-----GIREFVDDGAIDPDHASPLLVSVFLDKDFTFVVSSEADARAFVQFDPEHTVARPLP 2594 (3089)
T ss_dssp BCCSSHHHHHTHHHHHHHS-----SEEECCCSSSCCSSSCEEEEEEEECSSCCCCEEECHHHHHHHHTTSTTSEEEEECT
T ss_pred cCCHHHHHHHHHHHHHhcC-----CeEeeCcccccccCCCCccceeeeecCCCCcccCCHHHHHHHHHhCCCcceEEeCC
Confidence 2222223222222211100 000000000 0000000 111222233333 347889999988776554 56666
Q ss_pred c-ccccccccccCCcCC--CCCccceeeeecCCCCCCCCcCCCCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCC---
Q psy616 667 E-KIFDWKLYYENPIKS--SNKINSKWYGSIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI--- 740 (1152)
Q Consensus 667 ~-~r~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~FD~~~f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l--- 740 (1152)
. ++|+...++...... ..+.+++++|+++ +.||+.||||+++|++.||||+|++|+++|+||+||||+++++
T Consensus 2595 ~~~~W~~~~~~~~~i~~p~~~~~~~~~gG~i~--d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~ 2672 (3089)
T 3zen_D 2595 DSSDWEVTRKAGTEIRVPRKTKLSRTVGAQIP--TGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRW 2672 (3089)
T ss_dssp TTCCEEEEECTTCEEEEEEEECCSCCEEECCC--TTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHH
T ss_pred CCcceeeeecCCCCcCCCCcCCccceEEEEcC--CCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhcc
Confidence 5 889987776654222 2347789999997 5799999999999999999999999999999999999999876
Q ss_pred -CCCceEEEEEeccCCchh------ccc-----cccccccchhhHHHHHHHH-HcCCCCCcccccccchhHHHHHHHHHH
Q psy616 741 -ANQKIGMFVGVEEGSNYQ------DRL-----DQVNLTSTHNAILSARLAY-FMDLKGPVMAINTACSSSLVATHIACQ 807 (1152)
Q Consensus 741 -~~~~~gv~~g~~~~~~~~------~~~-----~~~~~~~~~~~~~a~ris~-~~~l~GPs~tvdtaCsSsl~Al~~A~~ 807 (1152)
++.++|||+|+..+.+.. ..+ ....+++...+++++|+++ +||++||+++|++|||||++|||+||+
T Consensus 2673 ~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~ 2752 (3089)
T 3zen_D 2673 VHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVD 2752 (3089)
T ss_dssp SCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHH
T ss_pred cCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHH
Confidence 679999999998765321 100 1112345566889999996 569999999999999999999999999
Q ss_pred HHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-----------CCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 808 SLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----------PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 808 ~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls-----------~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
+|++|+||+|||||+|. ++|..+..|..++++| |+++|||||.++|||++|||+|++|||++++|+++
T Consensus 2753 ~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~ 2831 (3089)
T 3zen_D 2753 KIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTEMMRAKGISDSKFSRANDRRRLGFLEAQGGGTILLARGDLALKM 2831 (3089)
T ss_dssp HHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHH
T ss_pred HHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcchhhhhccCCcccccCccccCCCCEEEeccceEEEEeeHHHHHhC
Confidence 99999999999999999 8999999999999887 69999999999999999999999999999999999
Q ss_pred CCceEEEEEEEEEecCCCCCCCCCCCH-------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH---HHH
Q psy616 877 GDPIHAIIRGSGINYDGKTNGITAPNG-------ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN---ALH 946 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~~~~~~~P~~-------~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~---al~ 946 (1152)
|++|||+|+|+++|+||++.++++|+. .+|.++|++||++||++|+||+|||+|||||++||++|.+ ++.
T Consensus 2832 G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~ 2911 (3089)
T 3zen_D 2832 GLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIA 2911 (3089)
T ss_dssp TCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHH
T ss_pred CCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHH
Confidence 999999999999999999999999973 4889999999999999999999999999999999999999 788
Q ss_pred HHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCC
Q psy616 947 DVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNE 1026 (1152)
Q Consensus 947 ~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~ 1026 (1152)
++|+... ..+|+|+|+|+||||+++|||+++++|++++|+|++|||++|++++||.++ .+++|+++++.++|+.. .
T Consensus 2912 ~~fg~~~--~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~-~~~~~~~~~~~~~w~~~-~ 2987 (3089)
T 3zen_D 2912 DSMGRAP--GNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELA-TSGHFVWVREPLDLRGK-F 2987 (3089)
T ss_dssp HHTTCCT--TCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGG-GCSSEEECSSCBCCCTT-S
T ss_pred HHhCccC--CCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCcc-ccCCeeecCCCccCCCC-C
Confidence 8887532 356999999999999999999999999999999999999999999999999 88999999999999743 4
Q ss_pred CccEEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEEEEeecCCHHHHHHHHHHHHHHHHhCC
Q psy616 1027 KLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNN 1097 (1152)
Q Consensus 1027 ~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~ 1097 (1152)
++|+++||||||||+|+|+||++++....... ...+..+|+|+++.|++..+++.+++..+.
T Consensus 2988 ~~r~a~vnSfGfGG~NahvVle~~~~~~~~~~---------~~~~~~~~~r~~~r~~~~~~~~~~~~~~~~ 3049 (3089)
T 3zen_D 2988 PLKAGLVTSLGFGHVSGLVALVHPEAFIAALD---------PSEREDYRTRAEQRMLAGQRRLVSAIAGGR 3049 (3089)
T ss_dssp CCCEEEEEEEETTTEEEEEEEECGGGTGGGSH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEccccCCCCeEEEEEecCchhhhccC---------hHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 57999999999999999999999764321110 134568999999999999999999998775
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-78 Score=723.63 Aligned_cols=398 Identities=24% Similarity=0.381 Sum_probs=359.1
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCC---CCCCCCcCCC
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPG---IDEFDPLFFE 706 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~FD~~~f~ 706 (1152)
.++||||||+|++|++.++++||++|.+|+++|+++|. |+.. ..+.+++|++++ ++.||+.||
T Consensus 20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~--~~~~-----------~~~~~~~~~~~~~~~~~~fd~~~~- 85 (438)
T 2iwz_A 20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVG--EEYK-----------SIPCSVAAYVPRGSDEGQFNEQNF- 85 (438)
T ss_dssp ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCS--GGGT-----------TSSCCEEECCCBSSSTTSBCGGGT-
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCc--hhcc-----------cCccceeeeeccccccccCChhhc-
Confidence 46899999999999999999999999999999999984 5432 234567899876 678999999
Q ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHhcCCCC-CCCCCCceEEEEEeccCCchh-------------ccccccccccchhh
Q psy616 707 ISPLEAERMDPRQRHLLQESWLALEDAGYGP-NQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNA 772 (1152)
Q Consensus 707 is~~ea~~mdpq~rl~L~~a~~AledAG~~~-~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~ 772 (1152)
|+++|++.|||++|++++++++||+|||+++ +++++.++|||+|+..+++.. ..+.++.+++...+
T Consensus 86 ~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 165 (438)
T 2iwz_A 86 VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVN 165 (438)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhh
Confidence 9999999999999999999999999999998 788888999999987765311 12334445566678
Q ss_pred HHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC----CCCccc
Q psy616 773 ILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP----DGKCYV 848 (1152)
Q Consensus 773 ~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~----~g~~~~ 848 (1152)
++++||++.|||+||+++|+++||||++||++|+++|++|+||+|||||++.+++|..+..|..++++|+ ++.|||
T Consensus 166 ~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~p 245 (438)
T 2iwz_A 166 MAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRP 245 (438)
T ss_dssp HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCT
T ss_pred HHHHHHHHHhCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCccccc
Confidence 8999999999999999999999999999999999999999999999999999899999999999999997 899999
Q ss_pred CCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy616 849 FDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYII 928 (1152)
Q Consensus 849 Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve 928 (1152)
||.+++||++|||++++|||++++|+++|++||++|+|+++++||++...+.|+..+|.++|++||++||++|+||+|||
T Consensus 246 fd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve 325 (438)
T 2iwz_A 246 FHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYIN 325 (438)
T ss_dssp TCTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred CCCCCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 99999999999999999999999999999999999999999999986433334789999999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccC
Q psy616 929 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008 (1152)
Q Consensus 929 ~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~ 1008 (1152)
+|||||++||++|.++|.++|+... ..|+|+|+|++|||+++|||+++++|++++|++++|||++||++|||.++++
T Consensus 326 ~HgtgT~~gD~~E~~al~~~fg~~~---~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~ 402 (438)
T 2iwz_A 326 AHATSTPLGDAAENKAIKHLFKDHA---YALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLN 402 (438)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHGGGG---GTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSB
T ss_pred ecCCCCcccCHHHHHHHHHHHhccC---CCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc
Confidence 9999999999999999999997543 3489999999999999999999999999999999999999999999999876
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+++.+.++|+. ..+|++++|||||||+|+|+||+++
T Consensus 403 ----~v~~~~~~~~~--~~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 403 ----YVPLKAQEWKT--EKRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp ----CCBSSCEECCC--SSSCEEEEEEEETTTEEEEEEEECC
T ss_pred ----ccCCCcccCCC--CCccEEEEecCcCCCeeEEEEEeeC
Confidence 56778889973 3478999999999999999999864
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-77 Score=713.70 Aligned_cols=395 Identities=22% Similarity=0.349 Sum_probs=358.6
Q ss_pred CCCCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCC
Q psy616 628 NSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEI 707 (1152)
Q Consensus 628 ~~~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i 707 (1152)
...++||||||||++|++.++++||++|.+|+++|+++| ||+... ...+++|+++ .||+.+| |
T Consensus 15 ~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~-----------~~~~~~~~v~---~fd~~~~-i 77 (427)
T 3ho9_A 15 VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLID--HFDTSA-----------YATKFAGLVK---DFNCEDI-I 77 (427)
T ss_dssp --CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTT-----------CSCCEEECCS---SCCCTTT-S
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCC--cccccc-----------CccceeeEcC---CCChhhc-C
Confidence 456889999999999999999999999999999999987 565432 2356778775 4999999 9
Q ss_pred CHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHH
Q psy616 708 SPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAIL 774 (1152)
Q Consensus 708 s~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~ 774 (1152)
+++|++.||||+|++++++|+||+|||++++++++.++|||+|+..+.+.. ..+.+..+++...+++
T Consensus 78 ~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (427)
T 3ho9_A 78 SRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMV 157 (427)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHH
T ss_pred CHHHHhhCCHHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHH
Confidence 999999999999999999999999999999999999999999987654211 1233445667777899
Q ss_pred HHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-----CCCCcccC
Q psy616 775 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVF 849 (1152)
Q Consensus 775 a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls-----~~g~~~~F 849 (1152)
++|||+.||++||+++|++|||||++||++|+++|++|+||+|||||++.+++|..+..|...++++ |+++|+||
T Consensus 158 a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pf 237 (427)
T 3ho9_A 158 AGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPW 237 (427)
T ss_dssp HHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTT
T ss_pred HHHHHHHhCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 55789999
Q ss_pred CCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy616 850 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 929 (1152)
Q Consensus 850 d~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~ 929 (1152)
|.++|||++|||++++|||++++|.++|++||++|+|+++++||++...+.|++.+|.++|+++|++||++|+||+|||+
T Consensus 238 d~~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~ 317 (427)
T 3ho9_A 238 DKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNA 317 (427)
T ss_dssp BTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred cCCCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEe
Confidence 99999999999999999999999999999999999999999999876666668999999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCC
Q psy616 930 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 1009 (1152)
Q Consensus 930 hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~ 1009 (1152)
|||||+.+|++|..++.++|+... .+++++|+|+++||+++|||+++++|++++|++++|||++|+++|||.++++
T Consensus 318 HgtgT~~~d~~e~~a~~~~~g~~~---~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~- 393 (427)
T 3ho9_A 318 HGTSTPAGDKAEAQAVKTIFGEAA---SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLD- 393 (427)
T ss_dssp CCCSCHHHHHHHHHHHHHHHGGGG---GTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCB-
T ss_pred cCCcCCCcCHHHHHHHHHHhcccC---CCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc-
Confidence 999999999999999999998642 3489999999999999999999999999999999999999999999999876
Q ss_pred CCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1010 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1010 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+++.+.++|+ ++|++++|||||||+|+|+||++|
T Consensus 394 ---~~~~~~~~~~----~~~~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 394 ---FVPHEARQVS----GMEYTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp ---CCBSSCEECS----SCCEEEEEEEETTTEEEEEEEECC
T ss_pred ---ccccccccCC----CCCEEEEeCccCCceeEEEEEEeC
Confidence 5667778885 468999999999999999999975
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-78 Score=715.85 Aligned_cols=392 Identities=21% Similarity=0.357 Sum_probs=351.9
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++||||||+|++|++.++++||++|.+|++++++++ ||+... .+.++++++ .||+.||+|+++
T Consensus 3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~-----------~~~~~~~~~----~fd~~~~~i~~~ 65 (424)
T 1tqy_A 3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRIS--FFDPSP-----------YRSQVAAEA----DFDPVAEGFGPR 65 (424)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC--SSCCTT-----------SSCCEEECC----CCCHHHHTCCHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCC--Cccccc-----------CCcceeEEe----ccCHhhcCCCHH
Confidence 479999999999999999999999999999999986 565432 234566766 599999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh---------------ccccccccccchhh---
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ---------------DRLDQVNLTSTHNA--- 772 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~---------------~~~~~~~~~~~~~~--- 772 (1152)
|++.||||+|++++++|+||+||||+++++++.++|||+|+..+++.. ....++..+....+
T Consensus 66 ~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 145 (424)
T 1tqy_A 66 ELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVP 145 (424)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHST
T ss_pred HHHhcCHHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhccccccccc
Confidence 999999999999999999999999999999999999999988765421 11223333333333
Q ss_pred -HHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC-----CCCc
Q psy616 773 -ILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKC 846 (1152)
Q Consensus 773 -~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~-----~g~~ 846 (1152)
++++||++.||++||+++|+++||||++||++|+++|++|+||+|||||++.+++|..+..|..++++++ +++|
T Consensus 146 ~~~~~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~ 225 (424)
T 1tqy_A 146 SVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHAS 225 (424)
T ss_dssp THHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCC
T ss_pred chhHhHHHHhcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCc
Confidence 4555999999999999999999999999999999999999999999999999999999999999999986 7999
Q ss_pred ccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccE
Q psy616 847 YVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINY 926 (1152)
Q Consensus 847 ~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~y 926 (1152)
||||.++|||++|||++++|||++++|+++|++||++|+|+++++||++...+.|++.+|.++|+++|++||++|+||+|
T Consensus 226 rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ 305 (424)
T 1tqy_A 226 RPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDY 305 (424)
T ss_dssp CTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred cCCCCCCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999999987667778899999999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccc
Q psy616 927 IITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII 1006 (1152)
Q Consensus 927 ve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~ 1006 (1152)
||+|||||++||++|.++|.++|+... ..++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++
T Consensus 306 ve~Hgtgt~~gD~~E~~al~~~f~~~~---~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~ 382 (424)
T 1tqy_A 306 INAHGSGTRQNDRHETAAYKRALGEHA---RRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECD 382 (424)
T ss_dssp EECCCCCCHHHHHHHHHHHHHHTGGGG---GGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBC
T ss_pred EEecCccCcCcCHHHHHHHHHHhcccC---CCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Confidence 999999999999999999999997542 34889999999999999999999999999999999999999999999998
Q ss_pred cCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1007 LKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1007 ~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
++ +++.+.++|+ +|++++|||||||+|+|+||++++
T Consensus 383 ~~----~v~~~~~~~~-----~~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 383 LD----YVPLEARERK-----LRSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp SC----CCBSSCEECC-----CSEEEEEEEETTTEEEEEEEECHH
T ss_pred cc----cCCCcccCCC-----CCEEEEccccCCceEEEEEEccCC
Confidence 76 3556667774 588999999999999999999874
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-77 Score=707.56 Aligned_cols=391 Identities=25% Similarity=0.375 Sum_probs=353.3
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++||||||+|++|++.++++||++|.+|++++++++ ||+.. ..+.+++|+++ .||+.| .|+++
T Consensus 7 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~-----------~~~~~~~~~i~---~fd~~~-~~~~~ 69 (416)
T 1e5m_A 7 KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPIT--RFDAS-----------DQACRFGGEVK---DFDATQ-FLDRK 69 (416)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCT-----------TSSCCEEECCC---SCCGGG-TSCHH
T ss_pred CCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCC--ccccc-----------cCccceeEEeC---CCCccc-cCCHH
Confidence 579999999999999999999999999999999986 56533 23456778775 499987 59999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCch-------------hccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~r 777 (1152)
|++.||||+|++++++|+||+|||++++++++.++|||+|+..+++. .....++.+++...+++++|
T Consensus 70 ~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ 149 (416)
T 1e5m_A 70 EAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGL 149 (416)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999998766521 11234445556667889999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-----CCCCcccCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDER 852 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls-----~~g~~~~Fd~~ 852 (1152)
|++.||++||+++|+++||||++||++|+++|++|+||+|||||++.+++|..+..|..++++| |++.|||||.+
T Consensus 150 ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~ 229 (416)
T 1e5m_A 150 TAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKD 229 (416)
T ss_dssp HHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTT
T ss_pred HHHHhCCCCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccC
Confidence 9999999999999999999999999999999999999999999999989999999999999998 58999999999
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
+|||++|||++++|||++++|+++|++||++|+|+++++||++...+.|++.+|.++|+++|++||++|+||+|||+|||
T Consensus 230 ~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgt 309 (416)
T 1e5m_A 230 RDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGT 309 (416)
T ss_dssp CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred CCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECC
Confidence 99999999999999999999999999999999999999999875445557889999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCe
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 1012 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 1012 (1152)
||++||++|.++|.++|+... ..++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++++
T Consensus 310 gt~~~D~~E~~al~~~~g~~~---~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~---- 382 (416)
T 1e5m_A 310 STPANDVTETRAIKQALGNHA---YNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLD---- 382 (416)
T ss_dssp SCHHHHHHHHHHHHHHHGGGG---GGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSC----
T ss_pred CCcCcCHHHHHHHHHHHcccC---CCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc----
Confidence 999999999999999997542 3489999999999999999999999999999999999999999999998765
Q ss_pred eeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1013 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1013 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+++.+.++|+ +|++++|||||||+|+|+||++|
T Consensus 383 ~v~~~~~~~~-----~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 383 YVPGQSRALI-----VDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp CCBSSCEECC-----CSEEEEEEEETTTEEEEEEEECC
T ss_pred ccCCccccCC-----CCEEEEccccCCCeeEEEEEEeC
Confidence 3566677773 58999999999999999999986
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-77 Score=709.20 Aligned_cols=390 Identities=20% Similarity=0.310 Sum_probs=354.6
Q ss_pred CCCCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCC
Q psy616 628 NSEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEI 707 (1152)
Q Consensus 628 ~~~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i 707 (1152)
...++||||||+|++|++.++++||++|.+|+++++++| ||+...+ ..+++|+++ .||+.|| |
T Consensus 6 ~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~-----------~~~~~~~v~---~fd~~~~-~ 68 (415)
T 1tqy_B 6 DDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVT--RFDVSRY-----------PATLAGQID---DFHAPDH-I 68 (415)
T ss_dssp ----CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECT--TTTGGGS-----------SCCEEECCC---SCCHHHH-S
T ss_pred CCCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECC--cccccCC-----------CcceEEEeC---CCCchhc-C
Confidence 345789999999999999999999999999999999997 6765432 246778875 4999988 9
Q ss_pred CHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHH
Q psy616 708 SPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAIL 774 (1152)
Q Consensus 708 s~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~ 774 (1152)
++++++.|||++|++++++++||+|||++++++++.++|||+|+..+++.. ..++++.+++...+++
T Consensus 69 ~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (415)
T 1tqy_B 69 PGRLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVN 148 (415)
T ss_dssp CTTTGGGCCHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHH
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHH
Confidence 999999999999999999999999999999999999999999988766421 1234455566677899
Q ss_pred HHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC----CCCCcccCC
Q psy616 775 SARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFD 850 (1152)
Q Consensus 775 a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls----~~g~~~~Fd 850 (1152)
++||++.|||+||+++|+++||||++||++|+++|++| ||++||||++..++|..+..|..+++|| |+++|+|||
T Consensus 149 a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd 227 (415)
T 1tqy_B 149 TGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFD 227 (415)
T ss_dssp HHHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTS
T ss_pred HHHHHHHhCCCCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCC
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999 999999999
Q ss_pred CCCCCcccccccEEEEEcccchhhcCCC-ceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy616 851 ERANGLVPSEAVVAVVLKRLSRALSDGD-PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 929 (1152)
Q Consensus 851 ~~a~G~v~gEG~~~vvLk~l~~A~~dgd-~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~ 929 (1152)
.++||+++|||++++|||++++|.++|+ +||++|+|+++++||++ ++.|+. +|.++|++||++||++|+||+|||+
T Consensus 228 ~~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~--~~~p~~-~~~~ai~~al~~Agl~~~dId~ve~ 304 (415)
T 1tqy_B 228 ERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAP--GSGRPA-GLERAIRLALNDAGTGPEDVDVVFA 304 (415)
T ss_dssp TTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCT--TCCCCC-SHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred CCCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCC--CCCCCH-HHHHHHHHHHHHcCCCHhHCCEEEE
Confidence 9999999999999999999999999999 99999999999999987 788887 9999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCC
Q psy616 930 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 1009 (1152)
Q Consensus 930 hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~ 1009 (1152)
|||||++||++|+.|+.++|+.. .|+|+|+|+|+||+++|||+++++|++++|++++|||++||++|||.++++
T Consensus 305 Hgtgt~~~D~~E~~al~~~~g~~-----~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~- 378 (415)
T 1tqy_B 305 DGAGVPELDAAEARAIGRVFGRE-----GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGID- 378 (415)
T ss_dssp CCCCSHHHHHHHHHHHHHHHCTT-----CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCE-
T ss_pred eCCCCcCcCHHHHHHHHHHhCCC-----CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc-
Confidence 99999999999999999999653 289999999999999999999999999999999999999999999998765
Q ss_pred CCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccccc
Q psy616 1010 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYIS 1052 (1152)
Q Consensus 1010 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~ 1052 (1152)
+++.+.++| .+|++++|||||||+|+|+||+++++
T Consensus 379 ---~v~~~~~~~-----~~~~a~~~sfGfgG~n~~~vl~~~~~ 413 (415)
T 1tqy_B 379 ---LVLGEPRST-----APRTALVLARGRWGFNSAAVLRRFAP 413 (415)
T ss_dssp ---ECBSSCBCC-----CCSEEEEEEEETTTEEEEEEEEEC--
T ss_pred ---ccCCCCccC-----CCCEEEEecCcCCCeEEEEEEecCCC
Confidence 567777788 35899999999999999999998753
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-76 Score=705.35 Aligned_cols=392 Identities=23% Similarity=0.353 Sum_probs=353.4
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++||||||+|++|++.++++||++|.+|++++++++ ||+... .+.+++|+++ .||+.| +|+++
T Consensus 28 ~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~-----------~~~~~~~~i~---~fd~~~-~~~~~ 90 (437)
T 2gqd_A 28 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKIT--RIDTEP-----------YSVHLAGELK---NFNIED-HIDKK 90 (437)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTT-----------SSCCEEECCS---SCCGGG-TSCST
T ss_pred CCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCC--cccccc-----------CccceeEEeC---CCChhc-CCCHH
Confidence 689999999999999999999999999999999986 565332 3456778775 499886 69999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCch-------------hccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~r 777 (1152)
|++.||||+|++++++|+||+|||++++++++.++|||+|+..+++. .....++.+++...+++++|
T Consensus 91 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ 170 (437)
T 2gqd_A 91 EARRMDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQ 170 (437)
T ss_dssp TTTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHH
Confidence 99999999999999999999999999999999999999998766521 01233445555667789999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC----CCCCcccCCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERA 853 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls----~~g~~~~Fd~~a 853 (1152)
|++.|||+||+++|+++||||++||++|+++|++|+||+|||||++.+++|..+..|..++++| |++.|+|||.++
T Consensus 171 ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~ 250 (437)
T 2gqd_A 171 VSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGR 250 (437)
T ss_dssp HHHHHTCCSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTTC
T ss_pred HHHHhCCCCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999989999999999999999 688999999999
Q ss_pred CCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy616 854 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTG 933 (1152)
Q Consensus 854 ~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtg 933 (1152)
|||++|||++++|||++++|+++|++||++|+|+++++||++...+.|++.+|.++|++||++||++|+||+|||+||||
T Consensus 251 ~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~Hgtg 330 (437)
T 2gqd_A 251 DGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTS 330 (437)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCS
T ss_pred CCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCC
Confidence 99999999999999999999999999999999999999998754455578899999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCee
Q psy616 934 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 1013 (1152)
Q Consensus 934 T~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~ 1013 (1152)
|++||++|++||.++|+... ..|+|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++++ +
T Consensus 331 T~~~D~~E~~al~~~fg~~~---~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~----~ 403 (437)
T 2gqd_A 331 TPVGDLNEVKAIKNTFGEAA---KHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLD----I 403 (437)
T ss_dssp CHHHHHHHHHHHHHHHGGGG---TSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSB----C
T ss_pred CcCcCHHHHHHHHHHHhccC---CCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc----c
Confidence 99999999999999997642 3489999999999999999999999999999999999999999999999876 3
Q ss_pred eccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1014 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1014 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
++.+.++|+ +|++++|||||||+|+|+||++|.
T Consensus 404 v~~~~~~~~-----~~~a~~~sfGfGG~na~~vl~~~~ 436 (437)
T 2gqd_A 404 VPNEAQDLD-----ITYAMSNSLGFGGHNAVLVFKKFE 436 (437)
T ss_dssp CBSSCEECC-----CSEEEEEEECGGGEEEEEEEECCC
T ss_pred CCCccccCC-----CCEEEEccCcCCCeeEEEEEEecc
Confidence 556667773 588999999999999999999863
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-77 Score=704.72 Aligned_cols=382 Identities=24% Similarity=0.332 Sum_probs=342.7
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++||||||+|++|++.++++||++|.+|+++++++| ||+... .+.+++|+++ ||+.+| |+++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~-----------~~~~~~~~v~----fd~~~~-~~~~ 63 (406)
T 2vba_A 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQ--ELKDSG-----------MRSHVWGNVK----LDTTGL-IDRK 63 (406)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECH--HHHHTT-----------CSCCEEECCC----CCCTTS-SCHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCC--cccccC-----------CccceEEEec----CChhhc-CCHH
Confidence 469999999999999999999999999999999987 565332 2345677764 999999 9999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCC-CceEEEEEeccCCchh--------------ccccccccccchhhHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIAN-QKIGMFVGVEEGSNYQ--------------DRLDQVNLTSTHNAILS 775 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~-~~~gv~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~a 775 (1152)
|++.|||++|++++++|+||+|||++++++++ .++|||+|+..+++.. ..++++.+++...++++
T Consensus 64 ~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 143 (406)
T 2vba_A 64 VVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVS 143 (406)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHH
Confidence 99999999999999999999999999888887 9999999988765421 11334455666678999
Q ss_pred HHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC------CCCCcccC
Q psy616 776 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVF 849 (1152)
Q Consensus 776 ~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls------~~g~~~~F 849 (1152)
+|||+.||++||+++|+++||||++||++|+++|++|+||+|||||++.+++|..+. |..++++| |+++||||
T Consensus 144 ~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pf 222 (406)
T 2vba_A 144 ACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTY 222 (406)
T ss_dssp HHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTT
T ss_pred HHHHHhccCCCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcC
Confidence 999999999999999999999999999999999999999999999999988887777 99999999 68999999
Q ss_pred CCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy616 850 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 929 (1152)
Q Consensus 850 d~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~ 929 (1152)
|.++|||++|||++++|||++++|+++|++||++|+|+++++||++ +++|++.+|.++|++||++|| +||+|||+
T Consensus 223 d~~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--~t~p~~~~~~~ai~~al~~ag---~dId~ve~ 297 (406)
T 2vba_A 223 DAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNS 297 (406)
T ss_dssp BTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC--TTSCCSHHHHHHHHHHHTTCC---SCCCEEEC
T ss_pred cCCCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCC--CCCCCHHHHHHHHHHHHhhCC---CCccEEEe
Confidence 9999999999999999999999999999999999999999999974 789999999999999999999 89999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccc-cC
Q psy616 930 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYII-LK 1008 (1152)
Q Consensus 930 hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~-~~ 1008 (1152)
|||||++||++|.++|.++|+... ++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++ ++
T Consensus 298 HgtgT~~gD~~E~~al~~~fg~~~-----~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~ 372 (406)
T 2vba_A 298 HGTSTPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLN 372 (406)
T ss_dssp CCCSCHHHHHHHHHHHHHHHTTCC-----CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSE
T ss_pred eCccCcccCHHHHHHHHHHhCcCC-----CceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccc
Confidence 999999999999999999997532 789999999999999999999999999999999999999999999886 32
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
+++...+ . ++|++++|||||||+|+|+||+++.
T Consensus 373 ----~v~~~~~-----~-~~~~a~~~sfGfgG~na~~vl~~~~ 405 (406)
T 2vba_A 373 ----IVTETTD-----R-ELTTVMSNSFGFGGTNATLVMRKLK 405 (406)
T ss_dssp ----ECCSCEE-----C-CCCEEEEEEEETTTEEEEEEEECC-
T ss_pred ----cCCcccC-----C-CCCEEEEcCCCCCCeEEEEEEEeCC
Confidence 2322221 1 4689999999999999999999863
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-76 Score=698.85 Aligned_cols=387 Identities=23% Similarity=0.346 Sum_probs=350.6
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
.++||||||+|++|++.++++||++|.+|+++++++|. |+... ....+++|.++ .||+.|| |++
T Consensus 5 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~--~~~~~----------~~~~~~~~~v~---~fd~~~~-i~~ 68 (412)
T 4ewg_A 5 MKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPD--WDYFE----------SLHTRLAAPLP---GFAQPAD-WPR 68 (412)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGG--GGGSS----------SCCCCEEBCCS---CCCCCTT-SCH
T ss_pred CCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCc--ccccc----------CCccceeeecC---CCChhhh-CCH
Confidence 46899999999999999999999999999999999985 43220 12345667654 5999999 999
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCC-CCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHH
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGY-GPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILS 775 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~-~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a 775 (1152)
++++.|||++|++++++++||+|||+ +++++++.++|||+|++.+.+.. ....+..+++...++++
T Consensus 69 ~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 148 (412)
T 4ewg_A 69 KKTRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTA 148 (412)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHH
Confidence 99999999999999999999999999 77888999999999987764211 12334455666778899
Q ss_pred HHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC-----CCCcccCC
Q psy616 776 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFD 850 (1152)
Q Consensus 776 ~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~-----~g~~~~Fd 850 (1152)
+|||+.||++||+++|+++||||++||++|+++|++|+||++||||++. ++|..+..|...+++++ ++.|||||
T Consensus 149 ~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd 227 (412)
T 4ewg_A 149 VNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFD 227 (412)
T ss_dssp HHHHHHTTCCSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTB
T ss_pred HHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 89999999999999986 79999999
Q ss_pred CCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy616 851 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 930 (1152)
Q Consensus 851 ~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~h 930 (1152)
.++|||++|||++++|||++++|.++|++||++|+|+++++||++ ++.|++.+|.++|++||++||++|+||+|||+|
T Consensus 228 ~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~--~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~H 305 (412)
T 4ewg_A 228 AKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAH--MTQPTASTMARAMQLALEDAKLDANAIAYVNAH 305 (412)
T ss_dssp TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSC--SSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred CCCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEcc
Confidence 999999999999999999999999999999999999999999974 889999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCccc-ccCC
Q psy616 931 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI-ILKN 1009 (1152)
Q Consensus 931 gtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i-~~~~ 1009 (1152)
||||++||++|..+|.++|+.. ++|+|+|+|+||+++|||+++++|++++|++++|||++|+++|||.+ +++
T Consensus 306 gtgt~~~D~~E~~al~~~~~~~------~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~- 378 (412)
T 4ewg_A 306 GTSTDRGDVAESQATARTFGER------MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLD- 378 (412)
T ss_dssp CCCCHHHHHHHHHHHHHHHCTT------CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCE-
T ss_pred CCCCccccHHHHHHHHHHcCCC------CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccc-
Confidence 9999999999999999999742 78999999999999999999999999999999999999999999988 554
Q ss_pred CCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1010 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1010 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+++.+.++|+ .|++++|||||||+|+|+||+++
T Consensus 379 ---~v~~~~~~~~-----~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 379 ---YIRGEARAID-----AEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp ---ECCSSCEECC-----CSEEEEEEEEGGGEEEEEEEECC
T ss_pred ---cccCcccCCC-----CCEEEEeeecCCcceEEEEEeeC
Confidence 4566666663 58999999999999999999976
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-76 Score=694.57 Aligned_cols=393 Identities=23% Similarity=0.358 Sum_probs=355.1
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
.++|+||||||++|++.++++||++|.+|++++++++ ||+...+ +.++++.+ +.||+.|| |++
T Consensus 3 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~-----------~~~~~~~v---~~fd~~~~-i~~ 65 (413)
T 3o04_A 3 KRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMT--RLNPDDF-----------PVKIAAEL---KDFDVEKY-LEK 65 (413)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCGGGS-----------SCCEEECC---SSCCGGGT-SCH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCC--ccccccC-----------cccccccc---CCCChhhc-cCH
Confidence 3679999999999999999999999999999999986 4554332 23455654 46999999 999
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCch-------------hccccccccccchhhHHHH
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSA 776 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~ 776 (1152)
+|++.|||++|++++++++||+|||++++++++.++|||+|++.+... .....+..+++...+++++
T Consensus 66 ~~~~~~d~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~ 145 (413)
T 3o04_A 66 KEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSG 145 (413)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHH
Confidence 999999999999999999999999999999999999999998765421 1123445556677789999
Q ss_pred HHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC----CCCCcccCCCC
Q psy616 777 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDER 852 (1152)
Q Consensus 777 ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls----~~g~~~~Fd~~ 852 (1152)
|||+.||++||+++|+++|||+++||++|+++|++|+||++||||++.+++|..+..|...+++| |+++|+|||.+
T Consensus 146 ~ia~~lgl~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~ 225 (413)
T 3o04_A 146 QVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKD 225 (413)
T ss_dssp HHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBTT
T ss_pred HHHHHhCCCCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 78999999999
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
++||++|||++++||+++++|.++|++||++|+|+++++||++...+.|+..+|.++++++|++||++|+||+|||+|||
T Consensus 226 ~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~Hgt 305 (413)
T 3o04_A 226 RDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGT 305 (413)
T ss_dssp CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred CCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCC
Confidence 99999999999999999999999999999999999999999987777888899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCe
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 1012 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 1012 (1152)
||++||++|.++|.++|+... .+++|+|+|+++||+++|||+++++|++++|++++|||++|+++|||.++++.
T Consensus 306 gT~~~d~~e~~al~~~~~~~~---~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~--- 379 (413)
T 3o04_A 306 STPYNDEYETQAIKTVFGEHA---KKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDY--- 379 (413)
T ss_dssp CCHHHHHHHHHHHHHHHGGGT---TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCC---
T ss_pred cCcccCHHHHHHHHHHhcccC---CCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCccc---
Confidence 999999999999999998653 34899999999999999999999999999999999999999999999998763
Q ss_pred eeccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1013 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1013 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
++.+.++| +.|++++|||||||+|+|+||++|.
T Consensus 380 -~~~~~~~~-----~~~~~~~~sfgfgG~na~~vl~~~~ 412 (413)
T 3o04_A 380 -VPNEAREA-----NVNVVISNSFGFGGHNATLVFKRIE 412 (413)
T ss_dssp -CBSSCEEC-----CCCEEEEEEEETTTEEEEEEEECCC
T ss_pred -CCCcccCC-----CCCEEEEeCccCCceEEEEEEEeCC
Confidence 33343333 4689999999999999999999873
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-75 Score=692.87 Aligned_cols=390 Identities=24% Similarity=0.304 Sum_probs=350.6
Q ss_pred CCCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCC
Q psy616 629 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 708 (1152)
Q Consensus 629 ~~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 708 (1152)
..++||||||+|++|++.++++||++|.+|+++|+++| ||+.+. ...+++++|++++ |+.|| |+
T Consensus 26 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~---------~~~~~~~~~~v~~----d~~~~-~~ 89 (434)
T 2gp6_A 26 AFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLD--DPFVEE---------FDLPVRIGGHLLE----EFDHQ-LT 89 (434)
T ss_dssp TSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECC--CHHHHH---------HCCSCCEEECCSC----CSTTS-SC
T ss_pred CCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCC--cccccc---------ccCccceeEEcCC----chhhh-CC
Confidence 35689999999999999999999999999999999998 565321 1234577898875 77788 99
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHH
Q psy616 709 PLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILS 775 (1152)
Q Consensus 709 ~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a 775 (1152)
++|++.||||+|++++++|+||+|||+ +++++.++|||+|++.+++.. ..+.++.+++...++++
T Consensus 90 ~~~~~~~d~~~~l~l~aa~~ALedAG~--~~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a 167 (434)
T 2gp6_A 90 RIELRRMGYLQRMSTVLSRRLWENAGS--PEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAA 167 (434)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHTTC--CCCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHhcCC--CccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHH
Confidence 999999999999999999999999999 567789999999988776521 12334455666778899
Q ss_pred HHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcC-CCC-----CCCCcccC
Q psy616 776 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAG-MLS-----PDGKCYVF 849 (1152)
Q Consensus 776 ~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g-~ls-----~~g~~~~F 849 (1152)
+||++.||++||+++|+++||||++||++|+++|++|+||++||||++..++|..+..|+.++ +++ |+++|+||
T Consensus 168 ~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pf 247 (434)
T 2gp6_A 168 AAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPF 247 (434)
T ss_dssp HHHHHHSCCCSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSS
T ss_pred HHHhhhhcCCCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecc
Confidence 999999999999999999999999999999999999999999999999999999999999999 888 79999999
Q ss_pred CCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy616 850 DERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 929 (1152)
Q Consensus 850 d~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~ 929 (1152)
|.++|||++|||++++|||++++|.++|++||++|+|+++++||++...+.|+..+|.++|+++|++||++|+||+|||+
T Consensus 248 d~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~ 327 (434)
T 2gp6_A 248 DRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNA 327 (434)
T ss_dssp BTTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEEC
T ss_pred cccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 99999999999999999999999999999999999999999999874333447889999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCC
Q psy616 930 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 1009 (1152)
Q Consensus 930 hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~ 1009 (1152)
|||||++||++|.++|.++|+.. +++++|+|+++||+++|||+++++|++++|++++|||++||++|||.++++
T Consensus 328 Hgtgt~~~D~~E~~al~~~fg~~-----~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~- 401 (434)
T 2gp6_A 328 HATGTQVGDLAEGRAINNALGGN-----RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLD- 401 (434)
T ss_dssp CCCSCHHHHHHHHHHHHHHHTTC-----CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCE-
T ss_pred eCCcCccchHHHHHHHHHHhccC-----CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc-
Confidence 99999999999999999999643 489999999999999999999999999999999999999999999998764
Q ss_pred CCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1010 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1010 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+++.+.++| ++|++++|||||||+|+|+||++|
T Consensus 402 ---~v~~~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 402 ---VVAGEPRPG-----NYRYAINNSFGFGGHNVAIAFGRY 434 (434)
T ss_dssp ---ECCSSCCCS-----CCCEEEEEEEETTTEEEEEEEECC
T ss_pred ---ccCCCccCC-----CCCEEEEeCCcCCCeeEEEEEEeC
Confidence 566666666 358999999999999999999975
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-76 Score=702.10 Aligned_cols=387 Identities=24% Similarity=0.306 Sum_probs=345.4
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
.++||||||||++|++.++++||++|.+|+++++++|. |+... ...+++|++ .||+.|| |++
T Consensus 22 m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~--~~~~~-----------~~~~~~g~~----~fd~~~~-i~~ 83 (428)
T 3mqd_A 22 MRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEE--YAELG-----------FRCQVHGAP----DIDIESL-VDR 83 (428)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHH--HHHTT-----------CSCCEEECC----CCCHHHH-SCT
T ss_pred CCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCc--ccccC-----------CCccccccc----CCChhhc-CCH
Confidence 46899999999999999999999999999999999984 44321 234556662 5999999 999
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCch-------------hccccccccccchhhHHHH
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSA 776 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~ 776 (1152)
++++.|||++|++++++++||+|||++++++++.++|||+|+..+++. .....++.+++...+++++
T Consensus 84 ~~~~~~d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 163 (428)
T 3mqd_A 84 RAMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASA 163 (428)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHH
Confidence 999999999999999999999999999999999999999998866533 1234455667777889999
Q ss_pred HHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC------CCCCcccCC
Q psy616 777 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFD 850 (1152)
Q Consensus 777 ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls------~~g~~~~Fd 850 (1152)
|||+.|||+||+++|+++||||++||++|+++|++|+||+|||||++. +++.....|..+++++ |+++|||||
T Consensus 164 ~ia~~lgl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd 242 (428)
T 3mqd_A 164 TLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMSSKYNDTPSTASRAYD 242 (428)
T ss_dssp HHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCTTTTSGGGSCCTTB
T ss_pred HHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhcccccCCcccccCccc
Confidence 999999999999999999999999999999999999999999999998 6677777799999998 568999999
Q ss_pred CCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy616 851 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITH 930 (1152)
Q Consensus 851 ~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~h 930 (1152)
.++|||++|||+++||||++++|+++|++||++|+|+++++||++ ++.|++.+|.++|++||+ |++ +||+|||+|
T Consensus 243 ~~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~H 317 (428)
T 3mqd_A 243 KNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYD--MVAPSGEGAIRCMKMALS--TVT-SKIDYINPH 317 (428)
T ss_dssp TTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC--SSSCCSHHHHHHHHHHHT--TCC-SCCCEEECC
T ss_pred CCCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCC--CCCCCHHHHHHHHHHHHh--CCc-cccCEEEEe
Confidence 999999999999999999999999999999999999999999984 789999999999999999 999 999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCC
Q psy616 931 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 1010 (1152)
Q Consensus 931 gtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~ 1010 (1152)
||||++||++|..||.++|+... ..++|+|+|+||||+++|||+++++|++++|++++|||++||++|||.++
T Consensus 318 gtgT~~~D~~E~~al~~~~~~~~---~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~---- 390 (428)
T 3mqd_A 318 ATSTPAGDAPEIEAIRQIFGAGD---VCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFA---- 390 (428)
T ss_dssp CCSCHHHHHHHHHHHHHHHCSGG---GSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGT----
T ss_pred CCCCCCcCHHHHHHHHHHhcccC---CCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccc----
Confidence 99999999999999999998432 22689999999999999999999999999999999999999999999875
Q ss_pred CeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1011 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
.+.+..+..+| .++|++++|||||||+|+|+||++|+
T Consensus 391 ~~~~~~~~~~~----~~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 391 DMPIVRKRIDN----VQLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp TSCBCSSCEES----CCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred cCCccCCcccc----CCCCEEEEecCcCCcceEEEEEeecC
Confidence 12233333333 34689999999999999999999874
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-75 Score=692.02 Aligned_cols=387 Identities=22% Similarity=0.290 Sum_probs=347.5
Q ss_pred CCCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCC
Q psy616 629 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 708 (1152)
Q Consensus 629 ~~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 708 (1152)
..++||||||+|++|++.++++||++|.+|+++|+++| ||+.+. ...+++++|++++ |+.|| |+
T Consensus 10 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~---------~~~~~~~~~~~~~----d~~~~-~~ 73 (416)
T 2wge_A 10 GFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALE--DEFVTK---------WDLAVKIGGHLKD----PVDSH-MG 73 (416)
T ss_dssp SSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECC--CHHHHH---------HTCSCCEEBCCSS----CGGGG-CC
T ss_pred CCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCC--cccccc---------ccCCccEEEEeCC----chhhh-CC
Confidence 45689999999999999999999999999999999998 565321 1234578899875 88888 99
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHH
Q psy616 709 PLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILS 775 (1152)
Q Consensus 709 ~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a 775 (1152)
++|++.||||+|++++++|+||+|||+ +++++.+||||+|++.+++.. ..+.++.+++...++++
T Consensus 74 ~~~~~~~d~~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a 151 (416)
T 2wge_A 74 RLDMRRMSYVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAA 151 (416)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHH
Confidence 999999999999999999999999999 677889999999988766421 12344455666778899
Q ss_pred HHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC-----CCCCcccCC
Q psy616 776 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFD 850 (1152)
Q Consensus 776 ~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls-----~~g~~~~Fd 850 (1152)
+||++.||++||+++|+++||||++||++|+++|++|+||++||||++.++++..+..|+..++++ +++.|+|||
T Consensus 152 ~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd 231 (416)
T 2wge_A 152 AVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFD 231 (416)
T ss_dssp HHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTB
T ss_pred HHHHHHhccCCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccc
Confidence 999999999999999999999999999999999999999999999999999998999999999999 789999999
Q ss_pred CCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy616 851 ERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKKSNLNPEDINYII 928 (1152)
Q Consensus 851 ~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P--~~~~q~~~i~~al~~Agi~p~dI~yve 928 (1152)
.++||+++|||++++|||++++|.++|++||++|+|+++++||++ ++.| ++.+|.++|+++|+++|++|+||+|||
T Consensus 232 ~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~--~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve 309 (416)
T 2wge_A 232 KDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFH--MVAPAADGVRAGRAMTRSLELAGLSPADIDHVN 309 (416)
T ss_dssp TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSC--SSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred cCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCC--ccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 999999999999999999999999999999999999999999986 4555 778999999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccC
Q psy616 929 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008 (1152)
Q Consensus 929 ~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~ 1008 (1152)
+|||||++||++|..++..+ +.. .++++++|+++||+++|||+++++|++++|+|++|||++||++|||.++++
T Consensus 310 ~HgtgT~~gD~~E~~al~~~-~~~-----~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~ 383 (416)
T 2wge_A 310 AHGTATPIGDAAEANAIRVA-GCD-----QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLD 383 (416)
T ss_dssp CCCCCCHHHHHHHHHHHHHT-TCT-----TSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCE
T ss_pred ECCCCCcCCCHHHHHHHHHh-ccC-----CCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc
Confidence 99999999999999999988 321 379999999999999999999999999999999999999999999998765
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+++.+.++| ++|++++|||||||+|+|+||++|
T Consensus 384 ----~v~~~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~ 416 (416)
T 2wge_A 384 ----VVAGEPRYG-----DYRYAVNNSFGFGGHNVALAFGRY 416 (416)
T ss_dssp ----ECCSSCEEC-----CCCEEEEEEEETTTEEEEEEEECC
T ss_pred ----cCCCCCccC-----CCCEEEEeCcccCceeEEEEEEeC
Confidence 455554443 468999999999999999999975
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-76 Score=703.48 Aligned_cols=404 Identities=22% Similarity=0.328 Sum_probs=355.0
Q ss_pred cEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccc-cccCCc--CCCCCccceeeeecC---CCCCCCCcCC
Q psy616 632 LIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKL-YYENPI--KSSNKINSKWYGSIP---GIDEFDPLFF 705 (1152)
Q Consensus 632 ~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~-~~~~~~--~~~~~~~~~~~g~~~---~~~~FD~~~f 705 (1152)
+||||||||++|++.++++||++|.+|+++|+++| ||++.. ++++.. ....+.+++++|+++ +++.||+.||
T Consensus 2 ~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~ 79 (431)
T 2ix4_A 2 RVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLT--LDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALW 79 (431)
T ss_dssp CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECC--GGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHH
T ss_pred cEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCC--hhhhhccccccccccccccCcccceeEEeccccccccCChhhc
Confidence 69999999999999999999999999999999998 455321 222110 002345678899998 6889999988
Q ss_pred CCCHHHhhcCCHHHHHHHHHHHHHHHhcCC-CCCCCCCCceEEEEEeccCCch-------------hccccccccccchh
Q psy616 706 EISPLEAERMDPRQRHLLQESWLALEDAGY-GPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHN 771 (1152)
Q Consensus 706 ~is~~ea~~mdpq~rl~L~~a~~AledAG~-~~~~l~~~~~gv~~g~~~~~~~-------------~~~~~~~~~~~~~~ 771 (1152)
|+++ .|||++|++++++++||+|||+ +++++++.++|||+|+..+++. .....++.+++...
T Consensus 80 -~~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 155 (431)
T 2ix4_A 80 -LNSK---AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILV 155 (431)
T ss_dssp -SCST---TCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCT
T ss_pred -CChh---hCCHHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchh
Confidence 8876 8999999999999999999999 8888888899999998766521 01233445556667
Q ss_pred hHHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC------CCC
Q psy616 772 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP------DGK 845 (1152)
Q Consensus 772 ~~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~------~g~ 845 (1152)
+++++||++.|||+||+++|+++||||++||++|+++|++|+||+|||||++.+++|..+..|..++++++ ++.
T Consensus 156 ~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 235 (431)
T 2ix4_A 156 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEA 235 (431)
T ss_dssp THHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGS
T ss_pred HHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999985 789
Q ss_pred cccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy616 846 CYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDIN 925 (1152)
Q Consensus 846 ~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~ 925 (1152)
|+|||.++||+++|||++++||+++++|+++|++||++|+|+++++||++.....|++.+|.++|+++|++||++|+||+
T Consensus 236 ~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId 315 (431)
T 2ix4_A 236 SRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQID 315 (431)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999986333334778999999999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCccc
Q psy616 926 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYI 1005 (1152)
Q Consensus 926 yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i 1005 (1152)
|||+|||||++||++|..+|.++|+.... ...++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.+
T Consensus 316 ~ve~HgtgT~~~D~~E~~al~~~~~~~~~-~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~ 394 (431)
T 2ix4_A 316 YVNAHATSTPIGDAVEARAIKTVFSEHAT-SGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIF 394 (431)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHTHHHH-TSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTC
T ss_pred EEEEeCCcCcccCHHHHHHHHHHHccccc-CCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCC
Confidence 99999999999999999999999975432 23589999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1006 ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1006 ~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+++ +++.+.++|+ ++|++++|||||||+|+|+||++|
T Consensus 395 ~~~----~v~~~~~~~~----~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 395 DKR----FMPLTTSKKM----LVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp CSS----SCCCSSCEEC----CCSEEEEEEEETTTEEEEEEEECC
T ss_pred Ccc----cCCccccccC----CCCEEEEecccCCCeeEEEEEeeC
Confidence 875 4566777774 358999999999999999999874
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-76 Score=693.80 Aligned_cols=389 Identities=25% Similarity=0.370 Sum_probs=352.1
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++||||||+|++|++.++++||++|.+|++++++++ ||+... .+.+++|++ .||+.|| |+++
T Consensus 2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~--~~~~~~-----------~~~~~~~~~----~fd~~~~-~~~~ 63 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPIT--RFDASA-----------LPVRIAAEV----DVDPGAY-LDRK 63 (408)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC--SSCCTT-----------SSCCEEECC----CCCGGGT-SCHH
T ss_pred CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeecc--ccCccc-----------CccceEEEE----ccChhhc-CCHH
Confidence 469999999999999999999999999999999986 565322 345677887 3999987 9999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 777 (1152)
|++.|||++|++++++++||+|||+++++++..++|||+|++.+++.. ....++.+++...+++++|
T Consensus 64 ~~~~~d~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (408)
T 1j3n_A 64 ELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAH 143 (408)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHH
Confidence 999999999999999999999999999999999999999988765421 1233444556667889999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC-----CCCcccCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDER 852 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~-----~g~~~~Fd~~ 852 (1152)
|++.||++||+++|+++||||++||++|+++|++|+||+|||||++..++|..+..|...+++++ ++.|||||.+
T Consensus 144 ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~ 223 (408)
T 1j3n_A 144 IAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLS 223 (408)
T ss_dssp HHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred HHHHhCCCCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999996 6789999999
Q ss_pred CCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGT 932 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgt 932 (1152)
+||+++|||++++|||++++|+++|++||++|+|+++++||++...+.|++.+|.++|+++|++||++|+||+|||+|||
T Consensus 224 ~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgt 303 (408)
T 1j3n_A 224 RDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGT 303 (408)
T ss_dssp CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred CCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCC
Confidence 99999999999999999999999999999999999999999876555668899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCe
Q psy616 933 GTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPF 1012 (1152)
Q Consensus 933 gT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 1012 (1152)
||++||++|+.++.++|+... .+++++|+|+++||+++|||++++||++++|++++|||++||++|||.++++.
T Consensus 304 gt~~gD~~E~~al~~~~g~~~---~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~--- 377 (408)
T 1j3n_A 304 STPVGDRAEVLAIKRVFGDHA---KRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDF--- 377 (408)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBC---
T ss_pred cCcccCHHHHHHHHHHhcCcC---CCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccc---
Confidence 999999999999999997542 24899999999999999999999999999999999999999999999998763
Q ss_pred eeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1013 YINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1013 ~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
++ +.++|+ +|++++|||||||+|+|+||++|
T Consensus 378 -v~-~~~~~~-----~~~a~~~sfGfGG~na~~vl~~~ 408 (408)
T 1j3n_A 378 -VP-EPREAK-----VDYALSNSFAFGGHNAVLAFKRV 408 (408)
T ss_dssp -CS-SCEECC-----CSEEEEEEECTTSEEEEEEEECC
T ss_pred -CC-CCcCCC-----CCEEEEecccCCcceEEEEEecC
Confidence 33 566773 58899999999999999999874
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-75 Score=690.44 Aligned_cols=396 Identities=24% Similarity=0.383 Sum_probs=356.6
Q ss_pred CCCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecC----CCCCCCCcC
Q psy616 629 SEELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIP----GIDEFDPLF 704 (1152)
Q Consensus 629 ~~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~FD~~~ 704 (1152)
..++|||+|||+++|.+.++++||++|++|+++|+++| ||+.+.+ +.+++|+++ +++.||+.|
T Consensus 8 ~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~--~~~~~~~-----------~~~~~~~~~~~~~~~~~fd~~~ 74 (428)
T 3kzu_A 8 HMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVT--EFEVDDL-----------ACQIACRIPVGDGTNGTFNPDL 74 (428)
T ss_dssp -CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECC--SSCCTTS-----------SCCEEECCCBSSSSTTCBCGGG
T ss_pred cccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCC--ccccccC-----------cCceeeEecccccccccCChhh
Confidence 35789999999999999999999999999999999997 5654332 345667765 566899999
Q ss_pred CCCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCC-CCCCceEEEEEeccCCch-------------hccccccccccch
Q psy616 705 FEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQ-IANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTH 770 (1152)
Q Consensus 705 f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~-l~~~~~gv~~g~~~~~~~-------------~~~~~~~~~~~~~ 770 (1152)
| |+++|++.||||+|++++++|+||+||||++++ +++.++|||+|++.+.+. ...++++..++..
T Consensus 75 ~-i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (428)
T 3kzu_A 75 H-MDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRL 153 (428)
T ss_dssp T-SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTC
T ss_pred c-CCHHHHHhCCHHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccch
Confidence 9 999999999999999999999999999999988 888999999998765421 1223455567788
Q ss_pred hhHHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCC------C
Q psy616 771 NAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD------G 844 (1152)
Q Consensus 771 ~~~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~------g 844 (1152)
.+++++|||+.||++||+++|+++||||++||++|+++|++|+||++||||++..++|..+..|...+++|++ +
T Consensus 154 ~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 233 (428)
T 3kzu_A 154 INLASGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTA 233 (428)
T ss_dssp TTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGG
T ss_pred hhhHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999965 7
Q ss_pred CcccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy616 845 KCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 924 (1152)
Q Consensus 845 ~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI 924 (1152)
.|+|||.++|||++|||++++|||++++|.++|++||++|+|+++++||++...+.|++.+|.++++++|++||++|+||
T Consensus 234 ~~~pfd~~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 313 (428)
T 3kzu_A 234 ASRPYDEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEI 313 (428)
T ss_dssp TCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred ccCCcccCCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHe
Confidence 89999999999999999999999999999999999999999999999998766666678899999999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcc
Q psy616 925 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 1004 (1152)
Q Consensus 925 ~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~ 1004 (1152)
+|||+||||| ++|++|++++.++|+... .+++++|+|+++||+++|+|+++++|++++|++++|||++||++|||.
T Consensus 314 d~ve~HgtgT-~~d~~e~~al~~~~g~~~---~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~ 389 (428)
T 3kzu_A 314 DYINAHGTST-MADTIELGAVERVVGEAA---AKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQ 389 (428)
T ss_dssp CEEECCCCSS-TTHHHHHHHHHHHHGGGG---GGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSC
T ss_pred eEEEecCCcc-hhhHHHHHHHHHHhccCC---CceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCC
Confidence 9999999999 999999999999998643 358999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1005 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1005 i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
++++. ++.+.++| ++|++++|||||||+|+|+||++|+
T Consensus 390 ~~~~~----~~~~~~~~-----~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 390 TRIDL----VPHKPRER-----KIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp CSSBC----CBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCccc----CCCCCcCC-----CCCEEEEeCcccChhhEEEEEeecC
Confidence 88763 34444444 4689999999999999999999874
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-75 Score=693.37 Aligned_cols=389 Identities=24% Similarity=0.326 Sum_probs=351.7
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|+||||+|++|++.++++||++|.+|+++++++| ||+... .+.+++|+++ .||+.+| ++++
T Consensus 23 ~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~-----------~~~~~~~~v~---~fd~~~~-~~~~ 85 (430)
T 1ox0_A 23 NRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGIT--KFDHSD-----------FDVHNAAEIQ---DFPFDKY-FVKK 85 (430)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECC--SSCCTT-----------SSCCEEECCS---SCCHHHH-CCGG
T ss_pred CCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCC--cccccC-----------Cccceeeecc---CCChhhc-CCHH
Confidence 679999999999999999999999999999999998 565432 2456677765 5999887 9999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCch-------------hccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNY-------------QDRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~a~r 777 (1152)
+++.|||++|++++++++||+|||++++++++.++|||+|+..+++. ...++++.+++...+++++|
T Consensus 86 ~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 165 (430)
T 1ox0_A 86 DTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGN 165 (430)
T ss_dssp GGGTCCHHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHH
Confidence 99999999999999999999999999999999999999998776531 11233455666677899999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC----CCCCcccCCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERA 853 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls----~~g~~~~Fd~~a 853 (1152)
|++.||++||+++|+++||||++||++|+++|++|+||+|||||++..++|..+..|..+++++ |++.|+|||.++
T Consensus 166 is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~ 245 (430)
T 1ox0_A 166 VAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDR 245 (430)
T ss_dssp HHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTC
T ss_pred HHHHhcCCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred CCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy616 854 NGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTG 933 (1152)
Q Consensus 854 ~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtg 933 (1152)
||+++|||++++|||++++|+++|++||++|+|+++++||++...+.|++.+|.++|+++|++||++|+||+|||+||||
T Consensus 246 ~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtg 325 (430)
T 1ox0_A 246 NGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTS 325 (430)
T ss_dssp CSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCS
T ss_pred CCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCc
Confidence 99999999999999999999999999999999999999998643333377899999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCee
Q psy616 934 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 1013 (1152)
Q Consensus 934 T~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~ 1013 (1152)
|+++|++|..++.++|+. .++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.++++ +
T Consensus 326 t~~~D~~E~~al~~~~g~------~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~----~ 395 (430)
T 1ox0_A 326 TPANEKGESGAIVAVLGK------EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEAN----V 395 (430)
T ss_dssp CHHHHHHHHHHHHHHHCS------SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSE----E
T ss_pred CcccCHHHHHHHHHHhCC------CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc----c
Confidence 999999999999999975 379999999999999999999999999999999999999999999998764 4
Q ss_pred eccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1014 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1014 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
++.+.++| ++|++++|||||||+|+|+||+++.
T Consensus 396 v~~~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 396 VYGQGLEK-----EIPYAISNTFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp CBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCCCcCC-----CCCEEEEeCccCCCceEEEEEeecC
Confidence 55555555 3589999999999999999999874
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-75 Score=692.85 Aligned_cols=397 Identities=23% Similarity=0.319 Sum_probs=357.9
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCC-----CCCCCcC
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGI-----DEFDPLF 704 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~FD~~~ 704 (1152)
.++||||||||++|++.++++||++|.+|+++++++| ||+... .+.+++|+++++ +.||+.|
T Consensus 23 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~--~~~~~~-----------~~~~~~g~v~~~~~~~~~~fd~~~ 89 (451)
T 4ddo_A 23 TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLG--DDIAGE-----------LSAKVGGTVQDVAEDPEGGFDPER 89 (451)
T ss_dssp -CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECC--HHHHTT-----------SSCCEEECCCCTTTCTTTCCCGGG
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCC--cccccc-----------ccCccceEccccccccccccchhh
Confidence 4689999999999999999999999999999999997 455332 235678888754 4899999
Q ss_pred CCCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCC-CCCceEEEEEeccCCchh-------------ccccccccccch
Q psy616 705 FEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQI-ANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTH 770 (1152)
Q Consensus 705 f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l-~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~ 770 (1152)
| |++++++.|||++|++++++++||+|||++++++ ++.++|||+|++.+.+.. ..+.++.+++..
T Consensus 90 ~-i~~~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (451)
T 4ddo_A 90 S-VPHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFL 168 (451)
T ss_dssp T-SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHC
T ss_pred h-CCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccc
Confidence 9 9999999999999999999999999999999998 889999999987654211 123444556677
Q ss_pred hhHHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCC------C
Q psy616 771 NAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD------G 844 (1152)
Q Consensus 771 ~~~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~------g 844 (1152)
.+++++|||+.|||+||+++|+++||||++||++|+++|++|+||++||||++..++|..+..|...++++++ +
T Consensus 169 ~~~~a~~ia~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 248 (451)
T 4ddo_A 169 SNLAAGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVR 248 (451)
T ss_dssp TTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGG
T ss_pred cchHHHHHHHHhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccc
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999976 8
Q ss_pred CcccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy616 845 KCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDI 924 (1152)
Q Consensus 845 ~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI 924 (1152)
.|+|||.++||+++|||++++||+++++|.++|++||++|+|+++++||+......|++.+|.++++++|++||++|+||
T Consensus 249 ~~~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dI 328 (451)
T 4ddo_A 249 ASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQV 328 (451)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred cccccccCCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 99999999999999999999999999999999999999999999999998877777888999999999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcc
Q psy616 925 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 1004 (1152)
Q Consensus 925 ~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~ 1004 (1152)
+|||+|||||++||++|..++.++|+. ..+++|+|+|+++||+++|||+++++|++++|++++|||++||++|||.
T Consensus 329 d~ve~Hgtgt~~~d~~E~~al~~~~~~----~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~ 404 (451)
T 4ddo_A 329 DYVNAHATSTPVGDAGEIEALKTVFGV----GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPA 404 (451)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHCS----SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGG
T ss_pred CEEEecCCcCcccCHHHHHHHHHHhCC----CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcc
Confidence 999999999999999999999999976 2358999999999999999999999999999999999999999999998
Q ss_pred c-ccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcccccc
Q psy616 1005 I-ILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYIST 1053 (1152)
Q Consensus 1005 i-~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~ 1053 (1152)
+ +++ +++.+.++| ++|++++|||||||+|+|+||++++..
T Consensus 405 ~~~~~----~~~~~~~~~-----~~~~a~~~sfgfgG~na~~vl~~~~~~ 445 (451)
T 4ddo_A 405 ADGLD----LIGPAARHV-----PVEIALSNGFGFGGVNASVLFRRYPSD 445 (451)
T ss_dssp GTTSE----ECCSSCEEC-----CCSEEEEEEEETTTEEEEEEEEESCC-
T ss_pred ccccc----ccCCCCCCC-----CcCEEEEeeEcCCCceEEEEEeeCCCC
Confidence 7 443 455555555 358999999999999999999998653
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-57 Score=545.28 Aligned_cols=448 Identities=12% Similarity=0.123 Sum_probs=379.4
Q ss_pred CcceeeccccCCCCCCCccccCCceEEEEecCch--hHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhh
Q psy616 6 NTTKIKVWVKSPLISLPISKVKKNNLLCFSSNKD--FQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNIND 82 (1152)
Q Consensus 6 ~~~~~~~W~~~~~~~~~~~~~~~~~~lvf~d~~~--~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d 82 (1152)
.|.|++.|++.+.++........++||||.|+.+ ++++|++.|+.+|. ++.|..++.+ +.++
T Consensus 27 ~w~y~~~W~~~~~~~~~~~~~~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~~---------------~~~~ 91 (525)
T 3qp9_A 27 SWRYRIDWKRLAVADASERAGLSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPLG---------------DRQR 91 (525)
T ss_dssp GGEEEEEEEECCCC------CCCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTTC---------------CHHH
T ss_pred CceeeeeeeECCCcccccCCCCCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCCC---------------CHHH
Confidence 6999999999876542112346689999999887 88999999988775 7777766221 7788
Q ss_pred HHHHHH-HHHhcCCCcCEEEEeCCCCCccc------c-cChHHHHHHHHHHHhCCCCceEEEEEcccccccCCccchhhh
Q psy616 83 YTFILN-KIYEKDKKIDSVFYLWPLEDKNC------I-YNIMPIIYFLQAVKKSKLYLRKLIISGISINKKNEEDLYYCY 154 (1152)
Q Consensus 83 ~~~l~~-~l~~~~~~~~~iv~lw~~~~~~~------~-~~~~~l~~l~qal~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 154 (1152)
|.++|. .+...+..+++|+|||+++.... . .+++++++|+|+|.+.+...+++++|.+++.+.+.++...|.
T Consensus 92 ~~~~l~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~g~~~~l~l~qal~~~~~~~~l~~vT~ga~~~~~~~~~~~p~ 171 (525)
T 3qp9_A 92 LAATLGEALAAAGGAVDGVLSLLAWDESAHPGHPAPFTRGTGATLTLVQALEDAGVAAPLWCVTHGAVSVGRADHVTSPA 171 (525)
T ss_dssp HHHHHHHHHHHTTSCCSEEEECGGGCCCBCTTSCTTCBHHHHHHHHHHHHHHHTTCCSCEEEEEESCCCCBTTBCCSCHH
T ss_pred HHHHHHhhhhcccCCCCeEEEcccCCCCccccccccccchHHHHHHHHHHHHhcCCCCcEEEEECCCEeCCCCCCCCCHH
Confidence 888887 45577888999999999865322 1 568899999999999888889999999999888777777888
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEecCccCcchHHHHHHHHHHhCC-CCceEEEEEcCceEEEEeEeEecccc--cccCc
Q psy616 155 FNSWVAFERSLHIIMPETQISIVFAEKITNFNIKNWINILFKELQE-PKLFSIMYYGNDLIRYQLNIKSIILK--DFKNS 231 (1152)
Q Consensus 155 ~~~~~g~~r~~~~e~p~~~~~~vd~~~~~~~~~~~~~~~l~~el~~-~~~~~va~r~~~~~r~~~~~~~~~~~--~~~~~ 231 (1152)
++++|||.|++++|+|+.++++||++...+ +..+..|..|+.. ..+.+|+||++ .||++++++.+.. ..+..
T Consensus 172 ~a~l~Gl~r~~~~E~p~~~~~~vDl~~~~~---~~~~~~l~~~l~~~~~e~~va~R~~--~~~~~rl~~~~~~~~~~~~~ 246 (525)
T 3qp9_A 172 QAMVWGMGRVAALEHPERWGGLIDLPSDAD---RAALDRMTTVLAGGTGEDQVAVRAS--GLLARRLVRASLPAHGTASP 246 (525)
T ss_dssp HHHHHHHHHHHHHHSTTTEEEEEEECSSCC---HHHHHHHHHHHTTCSCCSEEEEETT--EEEEEEEEECCC---CCCCC
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEcCCCCC---hhHHHHHHHHHhcCCCCCEEEEECC--cEEEEEEEEcCCcccCCccc
Confidence 999999999999999999999999986533 4566788888864 46789999999 8999999998776 33445
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEe-cCCcc--------------hHHHHHHHHhCCCcEEEEEecCCC
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILS-GRSKL--------------NSIIYKKLKKFNNKAIYIQVDVSD 296 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~-~R~~~--------------~~~~~~~l~~~g~~v~~~~~Dvsd 296 (1152)
.++++++||||||+||||+++|++|+++|+++|+++ +|+.. .+++.+++++.|.++.+++||++|
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd 326 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD 326 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence 789999999999999999999999999999999998 99843 256677788889999999999999
Q ss_pred HHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecC
Q psy616 297 KLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSS 376 (1152)
Q Consensus 297 ~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS 376 (1152)
.++++++++++. ++|+||+||||||+.. ++.+.+++.++|+++|++|+.|+++|++++.+.|++. ..+++||+|||
T Consensus 327 ~~~v~~~~~~i~-~~g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~--~~~~~iV~~SS 402 (525)
T 3qp9_A 327 AEAAARLLAGVS-DAHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLREAAAAG--GRPPVLVLFSS 402 (525)
T ss_dssp HHHHHHHHHTSC-TTSCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC------CCCEEEEEEE
T ss_pred HHHHHHHHHHHH-hcCCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccC--CCCCEEEEECC
Confidence 999999999998 7999999999999998 7899999999999999999999999999999875431 12789999999
Q ss_pred CccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHH
Q psy616 377 SSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLK 456 (1152)
Q Consensus 377 ~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~ 456 (1152)
+++.+|.+|+++|+++|+|+++|+++++..|+ ++++|+||.| ++||..+. .....+.+.|+.+|+++++++
T Consensus 403 ~a~~~g~~g~~~YaaaKa~l~~lA~~~~~~gi------~v~sI~pG~~-~tgm~~~~--~~~~~~~~~g~~~l~pee~a~ 473 (525)
T 3qp9_A 403 VAAIWGGAGQGAYAAGTAFLDALAGQHRADGP------TVTSVAWSPW-EGSRVTEG--ATGERLRRLGLRPLAPATALT 473 (525)
T ss_dssp GGGTTCCTTCHHHHHHHHHHHHHHTSCCSSCC------EEEEEEECCB-TTSGGGSS--HHHHHHHHTTBCCBCHHHHHH
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHHHHHHhCCC------CEEEEECCcc-ccccccch--hhHHHHHhcCCCCCCHHHHHH
Confidence 99999999999999999999999987766654 9999999999 78997532 223356778999999999999
Q ss_pred HHHHHHhcCceeeeeechhhhHHHHHHhhc
Q psy616 457 LFEQLLIQDKIQYLVLSGELEKLNQIINNI 486 (1152)
Q Consensus 457 ~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~ 486 (1152)
.|.+++..+.+++++...||.++...+...
T Consensus 474 ~l~~~l~~~~~~v~v~~~dw~~~~~~~~~~ 503 (525)
T 3qp9_A 474 ALDTALGHGDTAVTIADVDWSSFAPGFTTA 503 (525)
T ss_dssp HHHHHHHHTCSEEEECCBCHHHHHHHHHSS
T ss_pred HHHHHHhCCCCeEEEEeCCHHHHHhhcccc
Confidence 999999999999999999999988776543
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-53 Score=507.05 Aligned_cols=438 Identities=14% Similarity=0.175 Sum_probs=364.4
Q ss_pred CcceeeccccCCCCCCCccccCCceEEEEecCchh-HHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhH
Q psy616 6 NTTKIKVWVKSPLISLPISKVKKNNLLCFSSNKDF-QNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDY 83 (1152)
Q Consensus 6 ~~~~~~~W~~~~~~~~~~~~~~~~~~lvf~d~~~~-~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~ 83 (1152)
.|.|+..|+|.++++. ....++|||+.+..+. ...+...|...|. ++.|.. .+.+.++|
T Consensus 23 ~w~y~~~W~~~~~~~~---~~~~g~wl~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----------------~~~~~~~~ 83 (496)
T 3mje_A 23 ALRYHIEWNRVAEPGT---ARPAGRLLAVISPDHAGAPWVTAVLDALGPDTVRFEA----------------KGTDRAAW 83 (496)
T ss_dssp HTEEEEEEEECCCCCS---CCCSSCEEEEECTTSCCSHHHHHHHHHHCTTSEEEEC----------------CSSCHHHH
T ss_pred cccceEEeeECCCCCC---CCCCceEEEEeCCCccccHHHHHHHHhcCCcEEEeCC----------------CCCCHHHH
Confidence 5999999999876432 3456899999876543 3445555554432 332222 24478899
Q ss_pred HHHHHHHHhcCCCcCEEEEeCCCCCcc------cccChHHHHHHHHHHHhCCCCceEEEEEcccccccCCccchhhhHHH
Q psy616 84 TFILNKIYEKDKKIDSVFYLWPLEDKN------CIYNIMPIIYFLQAVKKSKLYLRKLIISGISINKKNEEDLYYCYFNS 157 (1152)
Q Consensus 84 ~~l~~~l~~~~~~~~~iv~lw~~~~~~------~~~~~~~l~~l~qal~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 157 (1152)
..++.++......+++|+|||+++... ...+++++++|+|+|.+.+...+++++|.+++.+.+.++...|.+++
T Consensus 84 ~~~l~~~~~~~~~~~~v~~l~~l~~~~~~~~~~~~~~~~~~l~l~qal~~~~~~~~l~~vT~ga~~~~~~~~~~~p~~a~ 163 (496)
T 3mje_A 84 AAQLAQLREDEGEFHAVVSLLAAAEALHTDHGSVPLGLAQTLLLAQALGDAGLTAPLWCLTRGGVAAGRGDVLSSPVQGA 163 (496)
T ss_dssp HHHHHHHHHHHCSCSEEEECGGGCCSEETTEEEEEHHHHHHHHHHHHHHHHTCCSCEEEEEESSSCCSTTCCCCCHHHHH
T ss_pred HHHHHhhhcccCCccEEEEccccccccCccccchhhHHHHHHHHHHHHHhcCCCCcEEEEECCCEECCCCCCCCChHHHH
Confidence 999988887778899999999996532 22467899999999998888889999999999888777777889999
Q ss_pred HHHHHHHHHHHcCCCcEEEEEecCccCcchHHHHHHHHHHhCC-CCceEEEEEcCceEEEEeEeEecccccccCccccCC
Q psy616 158 WVAFERSLHIIMPETQISIVFAEKITNFNIKNWINILFKELQE-PKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQG 236 (1152)
Q Consensus 158 ~~g~~r~~~~e~p~~~~~~vd~~~~~~~~~~~~~~~l~~el~~-~~~~~va~r~~~~~r~~~~~~~~~~~~~~~~~~~~~ 236 (1152)
+|||.|++++|+|+.++++||++...+ ......|..++.. ..+++|+||++ .||++++.+.+++. ....++++
T Consensus 164 l~Gl~r~~~~E~P~~~~~lvDl~~~~~---~~~~~~l~~~l~~~~~e~~va~R~~--~~~~~rl~~~~~~~-~~~~~~~~ 237 (496)
T 3mje_A 164 LWGLGRVIGLEHPDRWGGLIDLPETVD---TRAAARLTGLLADAGGEDQLAIRGS--GVLARRLAHAAPAV-PGSGKRPP 237 (496)
T ss_dssp HHHHHHHHHHHSGGGEEEEEEECSSCC---HHHHHHHHHHHHCCTTCCEEEEETT--EEEEEEEEECCCCC-TTTTCCCC
T ss_pred HHHHHHHHHHhCCCCeEEEEeCCCCcC---hhHHHHHHHHHhcCCCCCEEEEECC--eEEEEEEeeccccc-CCcCCCCC
Confidence 999999999999999999999986543 3455677788754 46789999999 89999999887654 33456666
Q ss_pred --CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc----hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 237 --GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL----NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 237 --~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~----~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
|+||||||+||||+++|++|+++|+++|++++|+.. .+++.++++..|.++.+++||++|.++++++++++.+.
T Consensus 238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999743 35677788889999999999999999999999998877
Q ss_pred cCCeeEEEEccccc-CcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 311 IGPIDGVLHIAGIS-GLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 311 ~G~idgvIh~AG~~-~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
++||+||||||+. . +.++.+++.++|+++|++|+.|+++|++++ ....+++||+|||+++.+|.+||++|
T Consensus 318 -g~ld~vVh~AGv~~~-~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~-------~~~~~~~iV~~SS~a~~~g~~g~~~Y 388 (496)
T 3mje_A 318 -APLTAVFHSAGVAHD-DAPVADLTLGQLDALMRAKLTAARHLHELT-------ADLDLDAFVLFSSGAAVWGSGGQPGY 388 (496)
T ss_dssp -SCEEEEEECCCCCCS-CCCTTTCCHHHHHHHHHTTHHHHHHHHHHH-------TTSCCSEEEEEEEHHHHTTCTTCHHH
T ss_pred -CCCeEEEECCcccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHh-------hccCCCEEEEEeChHhcCCCCCcHHH
Confidence 7999999999998 5 788999999999999999999999999984 44467899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceee
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 469 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~ 469 (1152)
+++|+|+++|+++++..|+ ++++|+||+|.++||..... ....+.+.|+.+|+++++++.|.+++..+..+.
T Consensus 389 aAaKa~ldala~~~~~~Gi------~v~sV~pG~w~~~gm~~~~~--~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~~~~ 460 (496)
T 3mje_A 389 AAANAYLDALAEHRRSLGL------TASSVAWGTWGEVGMATDPE--VHDRLVRQGVLAMEPEHALGALDQMLENDDTAA 460 (496)
T ss_dssp HHHHHHHHHHHHHHHHTTC------CCEEEEECEESSSCC--------CHHHHHTTEEEECHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHHHhcCC------eEEEEECCcccCCccccChH--HHHHHHhcCCCCCCHHHHHHHHHHHHcCCCceE
Confidence 9999999999999988866 89999999999999975422 223466789999999999999999999999999
Q ss_pred eeechhhhHHHHHHhh
Q psy616 470 LVLSGELEKLNQIINN 485 (1152)
Q Consensus 470 ~v~~~~~~~~~~~~~~ 485 (1152)
++...||.++...+..
T Consensus 461 ~v~~ldw~~~~~~~~~ 476 (496)
T 3mje_A 461 AITLMDWEMFAPAFTA 476 (496)
T ss_dssp EECEECHHHHHHHHTS
T ss_pred EEEEccHHHHHhhhcc
Confidence 9999999998776543
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=487.26 Aligned_cols=435 Identities=14% Similarity=0.149 Sum_probs=357.2
Q ss_pred CCcceeeccccCCCCCCCccccCCceEEEEecC---chhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCCh
Q psy616 5 INTTKIKVWVKSPLISLPISKVKKNNLLCFSSN---KDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNI 80 (1152)
Q Consensus 5 ~~~~~~~~W~~~~~~~~~~~~~~~~~~lvf~d~---~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~ 80 (1152)
-+|.|++.|++.+.++. ....++||||.++ .+++..|++.|+..+. ++.|..+ ++.+.
T Consensus 12 ~~w~y~~~W~~~~~~~~---~~~~~~wlv~~~~~~~~~~~~~l~~~l~~~g~~~~~v~~~---------------~~~~~ 73 (486)
T 2fr1_A 12 SALRYRIEWRPTGAGEP---ARLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVD---------------ARCGR 73 (486)
T ss_dssp GGSEEEEEEEECCCCCC---CCCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECC---------------TTCCH
T ss_pred ccceeeeeeeeCCCCCC---CCCCCCEEEEECCcccccHHHHHHHHHHhCCCeEEEEeCC---------------CCcCH
Confidence 36999999998876432 2356789988754 6889999999988765 5555543 24566
Q ss_pred hhHHHHHHHHHhcCCCcCEEEEeCCCCCcc------cccChHHHHHHHHHHHhCCCCceEEEEEcccccccCCccchhhh
Q psy616 81 NDYTFILNKIYEKDKKIDSVFYLWPLEDKN------CIYNIMPIIYFLQAVKKSKLYLRKLIISGISINKKNEEDLYYCY 154 (1152)
Q Consensus 81 ~d~~~l~~~l~~~~~~~~~iv~lw~~~~~~------~~~~~~~l~~l~qal~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 154 (1152)
++|..++.++ ..+++|||||+++... ...++++++.|+|+|...+...+++++|.+++.+...++...+.
T Consensus 74 ~~~~~~l~~~----~~~~~vv~l~~~~~~~~~~~~~~~~~~~~~l~l~qal~~~~~~~~l~~vt~ga~~~~~~~~~~~~~ 149 (486)
T 2fr1_A 74 DELAERLRSV----GEVAGVLSLLAVDEAEPEEAPLALASLADTLSLVQAMVSAELGCPLWTVTESAVATGPFERVRNAA 149 (486)
T ss_dssp HHHHHHHTTS----CCCSEEEECTTTTCCCCSSCGGGCHHHHHHHHHHHHHHHTTCCCCEEEEEESCSCSSTTSCCSCGG
T ss_pred HHHHHHHhhc----CCCceEEEecccCCCccccchhhhhhHHHHHHHHHHHHhCCCCCcEEEEecCCEECCCCCCcCCHH
Confidence 7777666443 5689999999986532 22357889999999998888889999999988887667666788
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEecCccCcchHHHHHHHHHHhCC-CCceEEEEEcCceEEEEeEeEecccccccCccc
Q psy616 155 FNSWVAFERSLHIIMPETQISIVFAEKITNFNIKNWINILFKELQE-PKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYI 233 (1152)
Q Consensus 155 ~~~~~g~~r~~~~e~p~~~~~~vd~~~~~~~~~~~~~~~l~~el~~-~~~~~va~r~~~~~r~~~~~~~~~~~~~~~~~~ 233 (1152)
++++|||.|+++.|+|+.++++||++...+ ...+..|+.|+.. ..+++|+||++ .||++++.+.+....+ ..+
T Consensus 150 ~a~l~Gl~r~~~~E~p~~~~~~vdl~~~~~---~~~~~~l~~~l~~~~~~~~va~r~~--~~~~~rl~~~~~~~~~-~~~ 223 (486)
T 2fr1_A 150 HGALWGVGRVIALENPAVWGGLVDVPAGSV---AELARHLAAVVSGGAGEDQLALRAD--GVYGRRWVRAAAPATD-DEW 223 (486)
T ss_dssp GHHHHHHHHHHHHHCGGGEEEEEEECTTCC---TTHHHHHHHHHTCSSCCCEEEEETT--EEEEEEEEECCCCCSS-CCC
T ss_pred HhHHHHhhhhHHhhCCCceEEEEECCCCCC---HHHHHHHHHHHhcCCCCCEEEEECC--cEEEEEEEecCCCCCC-CCc
Confidence 999999999999999999999999986543 2345677888864 46789999999 8999999987654433 368
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc----hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL----NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~----~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
+++++||||||+||||+++|++|+++|+++|++++|+.. .+++.++++..|.++.++.||++|.++++++++.+ .
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~ 302 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G 302 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence 999999999999999999999999999988999998853 35666778888999999999999999999999998 6
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
++|+||+||||||+.. +..+.+++.++|++++++|+.|+++|++++ ...+.++||+|||+++.+|.+|+++|
T Consensus 303 ~~g~ld~VIh~AG~~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~-------~~~~~~~~V~~SS~a~~~g~~g~~~Y 374 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELT-------RELDLTAFVLFSSFASAFGAPGLGGY 374 (486)
T ss_dssp TTSCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHH-------TTSCCSEEEEEEEHHHHTCCTTCTTT
T ss_pred hcCCCcEEEECCccCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHh-------CcCCCCEEEEEcChHhcCCCCCCHHH
Confidence 6799999999999988 788999999999999999999999999984 34478999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceee
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 469 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~ 469 (1152)
+++|+++++|+++++..|+ ++++|+||.|.+.||..... ...+...|+.+++++++++.|.+++..+.+++
T Consensus 375 aaaka~l~~la~~~~~~gi------~v~~i~pG~~~~~gm~~~~~---~~~~~~~g~~~i~~e~~a~~l~~~l~~~~~~~ 445 (486)
T 2fr1_A 375 APGNAYLDGLAQQRRSDGL------PATAVAWGTWAGSGMAEGPV---ADRFRRHGVIEMPPETACRALQNALDRAEVCP 445 (486)
T ss_dssp HHHHHHHHHHHHHHHHTTC------CCEEEEECCBC---------------CTTTTEECBCHHHHHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHHHHHHHhcCC------eEEEEECCeeCCCcccchhH---HHHHHhcCCCCCCHHHHHHHHHHHHhCCCCeE
Confidence 9999999999999887765 89999999999888864321 12344567889999999999999999998899
Q ss_pred eeechhhhHHHHHHhh
Q psy616 470 LVLSGELEKLNQIINN 485 (1152)
Q Consensus 470 ~v~~~~~~~~~~~~~~ 485 (1152)
++...||.++...+..
T Consensus 446 ~v~~~d~~~~~~~~~~ 461 (486)
T 2fr1_A 446 IVIDVRWDRFLLAYTA 461 (486)
T ss_dssp EECEECHHHHHHHHTS
T ss_pred EEEeCCHHHHhhhhcc
Confidence 9999999988775543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=435.36 Aligned_cols=435 Identities=15% Similarity=0.175 Sum_probs=341.0
Q ss_pred CcceeeccccCCCCCCCccccCCceEE---EEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChh
Q psy616 6 NTTKIKVWVKSPLISLPISKVKKNNLL---CFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNIN 81 (1152)
Q Consensus 6 ~~~~~~~W~~~~~~~~~~~~~~~~~~l---vf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~ 81 (1152)
.|.|...|++.+.++.. .....+.|. ...++.++...+++.++..+. |..+... +.++...
T Consensus 26 ~~~~~~~W~~~~~~~~~-~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~ 90 (511)
T 2z5l_A 26 AWRYRVTWKALTESSPV-RPHSIGRCLLVAPPTTDGELLDGLTTVLSERGASVARLEVP--------------IGARRAE 90 (511)
T ss_dssp GGEEEEEEEEC------------CEEEEEESTTSCHHHHHHHHHHHHTTTCCCCCEECC--------------TTCCHHH
T ss_pred CceeeeEEecCCCCCCc-ccCCCCcceeEEecCCCcchhhHHHhhccCCcceEEEEecC--------------CCCcchh
Confidence 58999999966532211 111122222 223456677888888876542 2222211 2233455
Q ss_pred hHHHHHHHHHhcCCCcCEEEEeCCCCCcccccChHHHHHHHHHHHhCCCC-ceEEEEEcccccccCCccchhhhHHHHHH
Q psy616 82 DYTFILNKIYEKDKKIDSVFYLWPLEDKNCIYNIMPIIYFLQAVKKSKLY-LRKLIISGISINKKNEEDLYYCYFNSWVA 160 (1152)
Q Consensus 82 d~~~l~~~l~~~~~~~~~iv~lw~~~~~~~~~~~~~l~~l~qal~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~g 160 (1152)
.|..++..+...+..+.+|++||.++.. ...+.+++.|+|+|...+.. ++++++|.+++.+...+...+ .++++||
T Consensus 91 l~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~~~~~~l~l~qal~~~~~~~~rl~~vt~ga~~~~~~~~~~~-~~a~~~G 167 (511)
T 2z5l_A 91 VAELLKPSMESAGEENTTVVSLLGLVPS--TDAVRTSIALLQAVSDIGVPAARVWALTRRAVAVVPGETPQD-AGAQLWG 167 (511)
T ss_dssp HHHHHHHHHTTSTTSCEEEEECGGGSCS--HHHHHHHHHHHHHHHHHTCSSEEEEEEEESSSCCSTTCCCCH-HHHHHHH
T ss_pred hhhhhccccccCCCCCCceEEecccCcc--chhHHHHHHHHHHHHhcCCCCceEEEEeCCCEecCCCCCccc-hhHHHHH
Confidence 6667777776677778899999987653 25678899999999876654 468999999888776665555 7899999
Q ss_pred HHHHHHHHcCCCcEEEEEecCccCc-------------------chHHHHHHHHHHhCC-CCceEEEEEcCceEEEEeEe
Q psy616 161 FERSLHIIMPETQISIVFAEKITNF-------------------NIKNWINILFKELQE-PKLFSIMYYGNDLIRYQLNI 220 (1152)
Q Consensus 161 ~~r~~~~e~p~~~~~~vd~~~~~~~-------------------~~~~~~~~l~~el~~-~~~~~va~r~~~~~r~~~~~ 220 (1152)
|+|+++.|+|+.++++||++..... .....+..|..++.. ..+++|+||++ .||++++
T Consensus 168 l~r~~~~E~p~~~~~~vDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~e~~va~r~~--~~~~~rl 245 (511)
T 2z5l_A 168 FGRVAALELPDIWGGLIDLPETAELTRTPETSQPPQTPERLPQTPNRRALELAAAVLAGRDGEDQVAVRAS--GIYGRRV 245 (511)
T ss_dssp HHHHHHHHCTTTEEEEEEECC------------------------CHHHHHHHHHHHTCSSCCCEEEEETT--EEEEEEE
T ss_pred HHHHHHHhCCCceEEEEECCCcccccccccccccccccccccccccHHHHHHHHHHHhcCCCCCEEEEECC--cEEEEEE
Confidence 9999999999999999999865310 012344567777764 46789999999 8999999
Q ss_pred EecccccccCccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc----hHHHHHHHHhCCCcEEEEEecCCC
Q psy616 221 KSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL----NSIIYKKLKKFNNKAIYIQVDVSD 296 (1152)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~----~~~~~~~l~~~g~~v~~~~~Dvsd 296 (1152)
.+.+... ...++++++||||||+||||+++|++|+++|+.+|++++|+.. .+++.++++..|.++.++.||++|
T Consensus 246 ~~~~~~~--~~~~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd 323 (511)
T 2z5l_A 246 SRAAAAG--AASWQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE 323 (511)
T ss_dssp EECCCCT--TCCCCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC
T ss_pred EEeccCC--CCCcCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC
Confidence 9865433 3468899999999999999999999999999988999988753 356677888889999999999999
Q ss_pred HHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCC-CCCEEEEec
Q psy616 297 KLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN-KLDFVCYFS 375 (1152)
Q Consensus 297 ~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~-~~~~iV~~S 375 (1152)
.++++++++. +++|+||||||+.. +..+.+++.++|++++++|+.|+++|++++ ... +.++||+||
T Consensus 324 ~~~v~~~~~~-----~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~-------~~~~~~~~~V~~S 390 (511)
T 2z5l_A 324 RDALAALVTA-----YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLT-------ADIKGLDAFVLFS 390 (511)
T ss_dssp HHHHHHHHHH-----SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHT-------SSCTTCCCEEEEE
T ss_pred HHHHHHHHhc-----CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHH-------hhccCCCEEEEEe
Confidence 9999999876 79999999999988 788999999999999999999999999984 333 678999999
Q ss_pred CCccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHH
Q psy616 376 SSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGL 455 (1152)
Q Consensus 376 S~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~ 455 (1152)
|+++.+|.+|+++|+++|+++++|+++++..|+ ++++|+||.|.++||..... ...+...|+.++++++++
T Consensus 391 S~a~~~g~~g~~~YaaaKa~ld~la~~~~~~gi------~v~sv~pG~~~~tgm~~~~~---~~~~~~~g~~~l~~e~~a 461 (511)
T 2z5l_A 391 SVTGTWGNAGQGAYAAANAALDALAERRRAAGL------PATSVAWGLWGGGGMAAGAG---EESLSRRGLRAMDPDAAV 461 (511)
T ss_dssp EGGGTTCCTTBHHHHHHHHHHHHHHHHHHTTTC------CCEEEEECCBCSTTCCCCHH---HHHHHHHTBCCBCHHHHH
T ss_pred CHHhcCCCCCCHHHHHHHHHHHHHHHHHHHcCC------cEEEEECCcccCCccccccc---HHHHHhcCCCCCCHHHHH
Confidence 999999999999999999999999999887765 88999999998889975421 123456788899999999
Q ss_pred HHHHHHHhcCceeeeeechhhhHHHHHHh
Q psy616 456 KLFEQLLIQDKIQYLVLSGELEKLNQIIN 484 (1152)
Q Consensus 456 ~~l~~~l~~~~~~~~v~~~~~~~~~~~~~ 484 (1152)
+.|..++..+.+++++...||.++...+.
T Consensus 462 ~~l~~al~~~~~~v~v~~~d~~~~~~~~~ 490 (511)
T 2z5l_A 462 DALLGAMGRNDVCVTVVDVDWERFAPATN 490 (511)
T ss_dssp HHHHHHHHHTCSEEEECCBCHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEeCCHHHHHhhhc
Confidence 99999999999999999999998876554
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=337.25 Aligned_cols=334 Identities=11% Similarity=0.057 Sum_probs=242.5
Q ss_pred cChHHHHHHHHHHHhCCCCceEEEEEcccccccCCccchhhhHHHHHHHHHHHHHHcC-CCcEEEEEecCccCcchHHHH
Q psy616 113 YNIMPIIYFLQAVKKSKLYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSLHIIMP-ETQISIVFAEKITNFNIKNWI 191 (1152)
Q Consensus 113 ~~~~~l~~l~qal~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~r~~~~e~p-~~~~~~vd~~~~~~~~~~~~~ 191 (1152)
+.+..++.++++..+...+. --+++.+.+.+...++...+.++++|||.|++++|+| ++++++||+++..... ...+
T Consensus 97 ~~l~~~~~~~~~~~~~l~~~-~r~vt~g~~~~~~~~~~~~~~~a~l~Gl~r~~~~E~p~~~~~~~vd~~~~~~~~-~~~~ 174 (454)
T 3u0b_A 97 EGLKELYTFFTPLLRNLAPC-ARVVVVGTTPAEAGSVHAQVVQRALEGFTRSLGKELRRGATVSLVYLSADAKPG-ATGL 174 (454)
T ss_dssp GGGHHHHHHHGGGGGGEEEE-EEEEEEEECGGGSSSHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECTTSCTT-CGGG
T ss_pred HHHHHHHHHHHHHHHhcCCC-ceEEEECCccCCCCCccccHHHHHHHHHHHHHHHhCCCCcEEEEEEeCCCCCcc-hhHH
Confidence 44555666665543332122 2233444555555566677889999999999999999 6999999998765421 1223
Q ss_pred HHHHHHhCCCCceEEEEEcCceEEEEeEeEecccccccCccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc
Q psy616 192 NILFKELQEPKLFSIMYYGNDLIRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK 271 (1152)
Q Consensus 192 ~~l~~el~~~~~~~va~r~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~ 271 (1152)
..++.++... .++||++ .++.....+..++...... .++++||||||+||||+++|++|+++|+ +|++++|+.
T Consensus 175 ~~~~~~~~~~---~~a~~~~--~~~~~~~~~~~~~~~~~~~-l~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~ 247 (454)
T 3u0b_A 175 ESTMRFILSA---KSAYVDG--QVFRVGAADSTPPADWDKP-LDGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDG 247 (454)
T ss_dssp HHHHHHHSSG---GGTTCCS--EEEEECSCCCCCCSCTTST-TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGG
T ss_pred HHHHHHhhCC---ceeEEcC--EEEEecCCCCCCCCccccC-CCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 4455555433 3488988 6665443333322222222 3689999999999999999999999998 567777776
Q ss_pred chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC-eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHH
Q psy616 272 LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP-IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTI 350 (1152)
Q Consensus 272 ~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~-idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~ 350 (1152)
..++..+..+..+ +.+++||++|.++++++++++.+++|+ ||+||||||+.. +..+.+++.++|++++++|+.|++
T Consensus 248 ~~~~l~~~~~~~~--~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~-~~~~~~~~~~~~~~~~~~nv~g~~ 324 (454)
T 3u0b_A 248 AAEDLKRVADKVG--GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQ 324 (454)
T ss_dssp GHHHHHHHHHHHT--CEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred cHHHHHHHHHHcC--CeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccC-CCccccCCHHHHHHHHHHHHHHHH
Confidence 5555544444444 458999999999999999999999986 999999999998 789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccc
Q psy616 351 ALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 430 (1152)
Q Consensus 351 ~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 430 (1152)
+|++++.|.| ...+.++||+|||+++..|.+++++|+++|+++++|++.++.+.. ..++++.+|+||.|. +.|.
T Consensus 325 ~l~~~~~~~~---~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~ 398 (454)
T 3u0b_A 325 RLTEGLVGNG---TIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLA--DKGITINAVAPGFIE-TKMT 398 (454)
T ss_dssp HHHHHHHHTT---SSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECSBC-C---
T ss_pred HHHHHHHHhh---hhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhh--hcCcEEEEEEcCccc-Chhh
Confidence 9999999875 334678999999999999999999999999999999998887643 346799999999885 4554
Q ss_pred ccccccchhHHhh-cC-CCCCCHHHHHHHHHHHHhc
Q psy616 431 IGNNEQTDFYFKS-SK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 431 ~~~~~~~~~~~~~-~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
............. .. .+..+|+|..+++..++..
T Consensus 399 ~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~ 434 (454)
T 3u0b_A 399 EAIPLATREVGRRLNSLFQGGQPVDVAELIAYFASP 434 (454)
T ss_dssp -------CHHHHHSBTTSSCBCHHHHHHHHHHHHCG
T ss_pred hhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhCC
Confidence 3322111111111 11 1235899999999887754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=409.63 Aligned_cols=312 Identities=19% Similarity=0.250 Sum_probs=180.2
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch----HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN----SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS 306 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~----~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 306 (1152)
..|+++++||||||+||||+++|++|+++|+++|++++|+... .+..++++..|.++.+++||++|.+++++++++
T Consensus 1879 ~~~~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 1958 (2512)
T 2vz8_A 1879 TFCPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITE 1958 (2512)
T ss_dssp CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHH
Confidence 4578999999999999999999999999999989999987432 345566777788999999999999999999999
Q ss_pred HHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC
Q psy616 307 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 386 (1152)
Q Consensus 307 ~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~ 386 (1152)
+. ++|+||+||||||+.. +..+.+++.++|++++++|+.|+++|++++.+.|. .+++||++||+++..|++||
T Consensus 1959 ~~-~~g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~-----~~g~iV~iSS~ag~~g~~g~ 2031 (2512)
T 2vz8_A 1959 AT-QLGPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACP-----ELDYFVIFSSVSCGRGNAGQ 2031 (2512)
T ss_dssp HH-HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCT-----TCCEEEEECCHHHHTTCTTC
T ss_pred HH-hcCCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCCEEEEecchhhcCCCCCc
Confidence 87 4899999999999987 78899999999999999999999999999988753 24899999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 387 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
++|+++|+++++|+++|+++|+ ++++++|++|.++||...... ...+...|..++...+++..|+..+..+.
T Consensus 2032 ~~Y~aaKaal~~l~~~rr~~Gl------~~~a~~~g~~~~~G~~~~~~~--~~~~~~~g~~~~~~~~~l~~l~~~~~~~~ 2103 (2512)
T 2vz8_A 2032 ANYGFANSAMERICEKRRHDGL------PGLAVQWGAIGDVGVVLETMG--TNDTVIGGTLPQRIASCLEVLDLFLSQPH 2103 (2512)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS------CCCEEEECCBCTTSTTTC------CCCCTTSEECBCHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHCCC------cEEEEEccCcCCcchhhhcch--hHHHHhhcccCccHHHHHHHHHHHhhCCC
Confidence 9999999999999999999988 899999999999999876443 12234457778899999999998887664
Q ss_pred eeeeeechhhhHHHHHHhhcCcCccccccccccchhHHHHHHHHHHHHHHhCCC-CcccccCCCccccCCchHHHHHHHH
Q psy616 467 IQYLVLSGELEKLNQIINNIAPKVSENKKINNFNIEKFIENDIKNHICNILNTK-KSEIYKNKNLADYGFDSISLAEFSR 545 (1152)
Q Consensus 467 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~L~~~-~~~i~~~~~f~elGlDSL~aveL~~ 545 (1152)
+.+.... +. ..... .......++.|.++|+++|+++ .++|+++++|++||+|||+++||++
T Consensus 2104 p~~~~~~--~~----------~~~~~------~~~~~~~~~~l~~~~a~vL~~~~~~~i~~~~~~~~lG~DSL~avelr~ 2165 (2512)
T 2vz8_A 2104 PVLSSFV--LA----------EKKAA------APRDGSSQKDLVKAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQ 2165 (2512)
T ss_dssp SEEEEEE--EC----------C----------------------------------------------------------
T ss_pred cccchhh--hc----------ccccc------cccccchHHHHHHHHHHHhCCCcccccCCCCchHHhCcchHHHHHHHH
Confidence 4322111 00 00000 0000112356889999999996 5789999999999999999999999
Q ss_pred HHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 546 ILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 546 ~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
||+++||++|+..++|+ +|+..|++++.+.
T Consensus 2166 ~i~~~~~~~l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2166 ILEREHDLVLSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp -------------------------------
T ss_pred HHHHHhCCcccHHHHHh-hhHHHHHHHHhhc
Confidence 99999999999999998 9999999987543
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=355.61 Aligned_cols=230 Identities=22% Similarity=0.302 Sum_probs=203.8
Q ss_pred cCCCEEEEECCchhHHHHHHHHHH-HcCCcEEEEecCCc----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLI-NKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La-~~Ga~~vil~~R~~----~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
+++++||||||+||||+++|++|+ ++|+++|++++|+. ..+++.+++++.|.++.+++||++|+++++++++++.
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 357899999999999999999999 79999999999983 3466778888899999999999999999999999998
Q ss_pred hhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 309 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 309 ~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
+++ +||+||||||+.. +..+.+++.++|++++++|+.|+++|++++.|. + +||+|||+++.+|++||++
T Consensus 608 ~~~-~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~--------l-~iV~~SS~ag~~g~~g~~~ 676 (795)
T 3slk_A 608 DEH-PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPD--------V-ALVLFSSVSGVLGSGGQGN 676 (795)
T ss_dssp TTS-CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT--------S-EEEEEEETHHHHTCSSCHH
T ss_pred HhC-CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC--------C-EEEEEccHHhcCCCCCCHH
Confidence 877 9999999999998 889999999999999999999999999996433 3 8999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCcee
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQ 468 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~ 468 (1152)
|+++|+|+++|+++++..|+ ++.+|+||+|.+.||...........+.+.|+.+++++++++.|..++..+.+.
T Consensus 677 YaAaka~~~alA~~~~~~Gi------~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~~~ 750 (795)
T 3slk_A 677 YAAANSFLDALAQQRQSRGL------PTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAHTV 750 (795)
T ss_dssp HHHHHHHHHHHHHHHHHTTC------CEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSCSS
T ss_pred HHHHHHHHHHHHHHHHHcCC------eEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCCcE
Confidence 99999999999999999877 999999999999888654333333456778999999999999999999999998
Q ss_pred eeeechhhhHHH
Q psy616 469 YLVLSGELEKLN 480 (1152)
Q Consensus 469 ~~v~~~~~~~~~ 480 (1152)
+++...||..+.
T Consensus 751 ~~~~~~d~~~~~ 762 (795)
T 3slk_A 751 VAPVRFSRLSDG 762 (795)
T ss_dssp CCCCCBCCC---
T ss_pred EEEEecCHHHhc
Confidence 888888887653
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-35 Score=342.39 Aligned_cols=270 Identities=17% Similarity=0.197 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHHHHhc-CCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCccccccc
Q psy616 718 RQRHLLQESWLALEDA-GYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTA 794 (1152)
Q Consensus 718 q~rl~L~~a~~AledA-G~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdta 794 (1152)
.++|+++++++||+|| |+++++++ +|++|+..+++. ..+.++++|++.||| +||+++|+++
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id----~v~~g~~~~~~~------------~~~~~a~~ia~~lgl~~~~p~~~v~~a 93 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVE----DVIWGCVNQTLE------------QGWNIARMASLMTQIPHTSAAQTVSRL 93 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE----EEEEECSSBSBT------------TTTTHHHHHHTTSSSCTTSEEEEEECG
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC----EEEEEeeccccC------------CCCcHHHHHHHHcCCCCCccEEEEccc
Confidence 4689999999999999 99887765 899997655432 124589999999999 9999999999
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHHH------------------HHH------Hh-------------
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEAY------------------IAM------TS------------- 836 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~~------------------~~~------~~------------- 836 (1152)
|+|+++||++|+++|++|+||++||||++.+.. |... +.. .+
T Consensus 94 CaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~ 173 (390)
T 1wdk_C 94 CGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAV 173 (390)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 999999999999999999999999999996532 2110 111 00
Q ss_pred -----------cCCCC----C------CCCcccCCCC---------------------CCCcc-------cccccEEEEE
Q psy616 837 -----------AGMLS----P------DGKCYVFDER---------------------ANGLV-------PSEAVVAVVL 867 (1152)
Q Consensus 837 -----------~g~ls----~------~g~~~~Fd~~---------------------a~G~v-------~gEG~~~vvL 867 (1152)
.|.+. | .+.|+|||.+ +|||+ ++||++++||
T Consensus 174 ~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavvL 253 (390)
T 1wdk_C 174 RSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIV 253 (390)
T ss_dssp HHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeEE
Confidence 01111 1 2334899999 79999 9999999999
Q ss_pred cccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHH
Q psy616 868 KRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHD 947 (1152)
Q Consensus 868 k~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~ 947 (1152)
+++++|.++|++||++|+|++.++++. .|.+.++..+++++|++||++|+||||||.|+++| +|..++.+
T Consensus 254 ~s~~~A~~~g~~~~a~I~g~~~~~~~p-----~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~-----~~~~~~~~ 323 (390)
T 1wdk_C 254 MSAQRAKDLGLEPLAVIRSMAVAGVDP-----AIMGYGPVPATQKALKRAGLNMADIDFIELNEAFA-----AQALPVLK 323 (390)
T ss_dssp EEHHHHHHTTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBH-----HHHHHHHH
T ss_pred ecHHHHHHcCCCccEEEEEEEEeccCh-----hhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCH-----HHHHHHHH
Confidence 999999999999999999999998642 23456789999999999999999999999999987 47778888
Q ss_pred HhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCC
Q psy616 948 VFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEK 1027 (1152)
Q Consensus 948 ~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~ 1027 (1152)
.|+-......++.+++.|.++||+.+|+|+.++++++++|+++ .
T Consensus 324 ~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~------------------------------------~ 367 (390)
T 1wdk_C 324 DLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN------------------------------------G 367 (390)
T ss_dssp HTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT------------------------------------T
T ss_pred HcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc------------------------------------C
Confidence 8864311023477899999999999999999999999999984 1
Q ss_pred ccEEEEcCcCCCcceEEEEEcc
Q psy616 1028 LRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1028 ~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
.+++++++.+.||.+..+|||.
T Consensus 368 ~~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 368 GTFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp CSEEEEEEEETTTEEEEEEEEC
T ss_pred CCEEEEEecccchheEEEEEEe
Confidence 2566777777789999999985
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-32 Score=323.95 Aligned_cols=263 Identities=19% Similarity=0.180 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaCs 796 (1152)
++|+++++++||+|||+++++++ +|++|+..+++. ...+++++++.||| +||+++|+++|+
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~~id----~v~~g~~~~~~~-------------~~~~a~~ia~~lgl~~~~p~~~v~~aCa 93 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVS----EVIFGHVLAAGC-------------GQNPVRQASVGAGIPYSVPAWSCQMICG 93 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS-------------CSCHHHHHHHHTTCCTTSCEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC-------------CCHHHHHHHHHcCCCCCccEEEecCcCh
Confidence 68999999999999999988876 689987654321 12478999999999 899999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH-------------------------------HHHHH---------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA-------------------------------YIAMT--------- 835 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~-------------------------------~~~~~--------- 835 (1152)
|++.||++|+++|++|+||++||||++.+.. |.. +...+
T Consensus 94 Sg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~ 173 (397)
T 1wl4_A 94 SGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQV 173 (397)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHHHHHHHHhCc
Confidence 9999999999999999999999999997542 210 01000
Q ss_pred --------------------hcCC------------------CCCCC------------Cccc-CCCCCCCcc-------
Q psy616 836 --------------------SAGM------------------LSPDG------------KCYV-FDERANGLV------- 857 (1152)
Q Consensus 836 --------------------~~g~------------------ls~~g------------~~~~-Fd~~a~G~v------- 857 (1152)
..|. +++|+ +||| ||.++||++
T Consensus 174 tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~ 253 (397)
T 1wl4_A 174 SREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASG 253 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCC
T ss_pred CHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCC
Confidence 0111 23454 5999 999999999
Q ss_pred cccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy616 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937 (1152)
Q Consensus 858 ~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~g 937 (1152)
++||++++||+++++|.++|++||++|+|++.+++. ..+.+.++..+++++|++||++|+||||||.|
T Consensus 254 ~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~------- 321 (397)
T 1wl4_A 254 INDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVE-----PSIMGIGPIPAIKQAVTKAGWSLEDVDIFEIN------- 321 (397)
T ss_dssp CEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC-------
T ss_pred ccchhheeeEecHHHHHHcCCCccEEEEEEEEeecC-----hhhccchHHHHHHHHHHHcCCCHHHCCEEEEe-------
Confidence 999999999999999999999999999999998742 12345688999999999999999999999976
Q ss_pred CHHHHH--HHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeec
Q psy616 938 DPVEIN--ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 1015 (1152)
Q Consensus 938 D~~E~~--al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~ 1015 (1152)
|+.|.. ++.+.|+-.. .++.+++.|.++||+.+|+|+.++++++++|+++
T Consensus 322 d~f~~~~l~~~~~lg~~~---~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------------------- 373 (397)
T 1wl4_A 322 EAFAAVSAAIVKELGLNP---EKVNIEGGAIALGHPLGASGCRILVTLLHTLERM------------------------- 373 (397)
T ss_dssp CSBHHHHHHHHHHHTCCG---GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-------------------------
T ss_pred cccHHHHHHHHHHcCCCC---cCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc-------------------------
Confidence 666664 4778887432 3588999999999999999999999999999984
Q ss_pred cccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1016 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1016 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++++++.+-||.+..+|||.
T Consensus 374 -----------~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 374 -----------GRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp -----------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred -----------CCCEEEEEEecccchheEEEEEe
Confidence 12567788777789999999984
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=314.85 Aligned_cols=263 Identities=15% Similarity=0.169 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaC 795 (1152)
.++|+++++++||+|||+++++++ ++++|...+++. ...+++++++.+||+ ||+++|+++|
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id----~~~~g~~~~~~~-------------~~~~a~~ia~~lgl~~~~p~~~v~~aC 89 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVN----EVILGQVLPAGE-------------GQNPARQAAMKAGVPQEATAWGMNQLC 89 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS-------------CSCHHHHHHHHTTCCTTSEEEEEECGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC-------------CcHHHHHHHHHcCCCCCceEEEecccc
Confidence 357999999999999999988876 677776544321 124789999999999 9999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH-------------------------------HHHH-----Hh--
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA-------------------------------YIAM-----TS-- 836 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~-------------------------------~~~~-----~~-- 836 (1152)
+||+.||++|+++|++|+||++||||++.+.. |.. +... .+
T Consensus 90 aSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g 169 (392)
T 2vu1_A 90 GSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQ 169 (392)
T ss_dssp GHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhC
Confidence 99999999999999999999999999996432 210 0000 00
Q ss_pred ----------------------cCCC----------CCCCCcccCCCC--------------------CCCcc-------
Q psy616 837 ----------------------AGML----------SPDGKCYVFDER--------------------ANGLV------- 857 (1152)
Q Consensus 837 ----------------------~g~l----------s~~g~~~~Fd~~--------------------a~G~v------- 857 (1152)
.|.+ +++| |+|||.+ +||++
T Consensus 170 ~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~-~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt~~~~~~ 248 (392)
T 2vu1_A 170 LSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKG-DITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASG 248 (392)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTC-CEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCCSSSBCC
T ss_pred CCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCC-ceeeccccccCCCCCHHHHhcCCCccCCCCCeeCcccCC
Confidence 0111 1123 8999998 89999
Q ss_pred cccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy616 858 PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937 (1152)
Q Consensus 858 ~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~g 937 (1152)
++||++++||+++++|.++|+++|++|+|++.+++.. .+.+.++..+++++|++||++|+||||||.|
T Consensus 249 ~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~~agl~~~dId~ie~~------- 316 (392)
T 2vu1_A 249 LNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDP-----KVMGTGPIPASRKALERAGWKIGDLDLVEAN------- 316 (392)
T ss_dssp CEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHHHHTCCGGGCSEEEEC-------
T ss_pred ccChhheeeEecHHHHHhcCCCccEEEEEEEEeecCh-----hhcchhHHHHHHHHHHHcCCCHHHcCEEEec-------
Confidence 9999999999999999999999999999999987431 2345678999999999999999999999988
Q ss_pred CHHHHHHH--HHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeec
Q psy616 938 DPVEINAL--HDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYIN 1015 (1152)
Q Consensus 938 D~~E~~al--~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~ 1015 (1152)
|+.|..++ .+.|+-. ..++.+++.|.++||+.+|+|+.++++++++|+++
T Consensus 317 d~f~~~~l~~~~~lg~~---~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------------------- 368 (392)
T 2vu1_A 317 EAFAAQACAVNKDLGWD---PSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR------------------------- 368 (392)
T ss_dssp CSBHHHHHHHHHHHCCC---GGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH-------------------------
T ss_pred cccHHHHHHHHHHcCCC---cccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc-------------------------
Confidence 78888874 6677643 23578999999999999999999999999999984
Q ss_pred cccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1016 KSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1016 ~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..++++++..+-||.+..+|||.
T Consensus 369 -----------~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 369 -----------GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp -----------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred -----------CCCEEEEEEecccchheEEEEEe
Confidence 12566665543489999999984
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=313.23 Aligned_cols=266 Identities=18% Similarity=0.230 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaCs 796 (1152)
.+|+++++++||+|||+++++++ +|++|+...++. .....+.++++.||+ +||+++|+++|+
T Consensus 27 ~~L~~~Aa~~Al~dAgl~~~~id----~v~~g~~~~~~~------------~~~~~a~~va~~lGl~~~~p~~~v~~aCa 90 (401)
T 1ulq_A 27 DDLLAHALSVLVDRSGVPKEEVE----DVYAGCANQAGE------------DNRNVARMALLLAGFPVEVAGCTVNRLCG 90 (401)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSST------------TTTTHHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCCC------------CCChHHHHHHHHhCCCCCccEeeccccch
Confidence 57999999999999999988876 899997654432 014578999999999 899999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH---------------------------HH---------HHH-----
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE---------------------------AY---------IAM----- 834 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~---------------------------~~---------~~~----- 834 (1152)
|+++||++|+++|++|+||++||||++.+.. |. .+ +..
T Consensus 91 s~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~ 170 (401)
T 1ulq_A 91 SGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENL 170 (401)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccchHHHHHHHH
Confidence 9999999999999999999999999996443 21 11 010
Q ss_pred -----------------H--------hcCC------------------CCCCCC------------ccc-CCCCCCCcc-
Q psy616 835 -----------------T--------SAGM------------------LSPDGK------------CYV-FDERANGLV- 857 (1152)
Q Consensus 835 -----------------~--------~~g~------------------ls~~g~------------~~~-Fd~~a~G~v- 857 (1152)
+ ..|. +++|+. +|| ||. ||++
T Consensus 171 ~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~--~G~vt 248 (401)
T 1ulq_A 171 AEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFRE--GGTVT 248 (401)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSST--TCSCB
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCC--CCCee
Confidence 0 0112 233443 456 885 7998
Q ss_pred ------cccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy616 858 ------PSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHG 931 (1152)
Q Consensus 858 ------~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hg 931 (1152)
++||+++|||+++++|.++|+++|++|+|++.++|+.. +.+.++..+++++|++||++|+||||||+|+
T Consensus 249 ~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~a~~~al~~Agl~~~dId~ie~he 323 (401)
T 1ulq_A 249 AGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPR-----IMGIGPVPATRKALERAGLSFSDLGLIELNE 323 (401)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGG-----GGGGTHHHHHHHHHHHTTCCGGGCSEEEECC
T ss_pred chhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCcc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEEec
Confidence 69999999999999999999999999999999988642 1235678999999999999999999999998
Q ss_pred CCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCC
Q psy616 932 TGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSP 1011 (1152)
Q Consensus 932 tgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~ 1011 (1152)
+.|. .|+..++. |+-.. +..++.+.+-|..+||+.+|+|+..+++++++|+++
T Consensus 324 afa~----~~l~~~~~-lg~~~-~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~--------------------- 376 (401)
T 1ulq_A 324 AFAA----QALAVLRE-WSLSM-EDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR--------------------- 376 (401)
T ss_dssp SBHH----HHHHHHHH-HTCCT-TCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------------------
T ss_pred chHH----HHHHHHHH-cCCCC-CCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc---------------------
Confidence 8884 67766654 44211 112344545555689999999999999999999995
Q ss_pred eeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1012 FYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1012 ~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..+++++++|++||.|..+|||.
T Consensus 377 ---------------~~~~gl~~~~~ggG~~~a~v~~~ 399 (401)
T 1ulq_A 377 ---------------KVQFGLATMCIGVGQGIAVVVEG 399 (401)
T ss_dssp ---------------TCSEEEEEEEETTTEEEEEEEEE
T ss_pred ---------------CCCEEEEEeecCCcccEEEEEEe
Confidence 13688999999999999999985
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-31 Score=309.82 Aligned_cols=267 Identities=22% Similarity=0.285 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaCs 796 (1152)
.+|+++++++||+|||+++++++ +|++|+...++. ....++.++++.||+ +||+++|+++|+
T Consensus 56 ~~La~~Aa~~AL~dAGl~~~~Id----~vi~g~~~~~~~------------~~~~~a~~va~~lGl~~~~p~~~v~~aCa 119 (442)
T 2wu9_A 56 DDLLAPVLRALIEKTNLNPSEVG----DIVVGTVLAPGS------------QRASECRMAAFYAGFPETVAVRTVNRQCS 119 (442)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----CEEEECCSSBHH------------HHHHHHHHHHHHTTCCTTSCEEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCccC------------CCChHHHHHHHHcCCCCCceEEEeCCcCH
Confidence 57899999999999999988877 699997654321 124678999999999 899999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH-------------HH-------HHH---------------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE-------------AY-------IAM--------------------- 834 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~-------------~~-------~~~--------------------- 834 (1152)
|+++||++|+++|++|+||++||||++.+.. |. .+ +..
T Consensus 120 Sg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~gisre~~~~~A~ 199 (442)
T 2wu9_A 120 SGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAV 199 (442)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999999999999999999999996543 11 00 100
Q ss_pred -H--------hcCCCCC------------------------CC------------Cccc-CCCCCCCcc-------cccc
Q psy616 835 -T--------SAGMLSP------------------------DG------------KCYV-FDERANGLV-------PSEA 861 (1152)
Q Consensus 835 -~--------~~g~ls~------------------------~g------------~~~~-Fd~~a~G~v-------~gEG 861 (1152)
+ ..|.+.. |+ .+|| ||. ||++ ++||
T Consensus 200 ~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~--~G~vt~~n~s~~~DG 277 (442)
T 2wu9_A 200 DSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK--DGTTTAGNSSQVSDG 277 (442)
T ss_dssp HHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT--TCCCCGGGBCCCEEE
T ss_pred HHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC--CCCeechhcCCCCCc
Confidence 0 1233332 33 3446 885 7998 5999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy616 862 VVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941 (1152)
Q Consensus 862 ~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E 941 (1152)
+++|||+++++|.++|++|+++|+|++.+++... +.+.++..+++++|++||++|+||||||+|+++|. .|
T Consensus 278 AaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~-----~~~~~~~~A~~~Al~~AGl~~~DId~iE~h~aft~----~~ 348 (442)
T 2wu9_A 278 AGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPA-----IMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFAS----QF 348 (442)
T ss_dssp EEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGG-----GGGGHHHHHHHHHHHHTTCCGGGCCEEEECCSBHH----HH
T ss_pred eEEEEEeeHHHHHHcCCCceEEEEEEEEecCCch-----hcchHHHHHHHHHHHHcCCCHHHCCEEEEeCCChH----HH
Confidence 9999999999999999999999999999987421 22457889999999999999999999999999996 68
Q ss_pred HHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccc
Q psy616 942 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 1021 (1152)
Q Consensus 942 ~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w 1021 (1152)
+.+++ .|+-.. .+..+.|+.|+ +||+.+|+|+..+++++++|+++. |
T Consensus 349 l~~~~-~lG~~~--~~vN~~GG~~a-~GHp~GAsG~~~~~~~v~~Lr~~~-~---------------------------- 395 (442)
T 2wu9_A 349 VYCRN-KLGLDP--EKINVNGGAMA-IGHPLGATGARCVATLLHEMKRRG-K---------------------------- 395 (442)
T ss_dssp HHHHH-HHTCCG--GGBSTTCCHHH-HCCCHHHHHHHHHHHHHHHHHHHC-T----------------------------
T ss_pred HHHHH-HhCCCC--CCcCCCccHhh-cCCchhHHHHHHHHHHHHHHhccC-C----------------------------
Confidence 88874 454322 11223466564 899999999999999999999863 0
Q ss_pred cccCCCccEEEE-cCcCCCcceEEEEEcccc
Q psy616 1022 NTVNEKLRIGAV-SAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1022 ~~~~~~~r~a~v-~sfG~gG~nah~il~~~~ 1051 (1152)
..+++++ +++| ||.|+++||+.+.
T Consensus 396 -----~~~~glas~~~G-GG~~~a~v~~~~~ 420 (442)
T 2wu9_A 396 -----DCRFGVVSMCIG-TGMGAAAVFERGD 420 (442)
T ss_dssp -----TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred -----CCCEEEEEeecc-cchheEEEEEecc
Confidence 1356664 6688 9999999999764
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=276.34 Aligned_cols=235 Identities=14% Similarity=0.158 Sum_probs=191.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..+++.+++++.|.++.+++||++|+++++++++++.++||+
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~-Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSI-VVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999985 4555555 5567788889999999999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||+.....++.+++.|+|++++++|+.|++++.|+++|+|++.. .+.||++||+++..|.+++++|+++|
T Consensus 85 iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~---~G~IVnisS~~g~~~~~~~~~Y~asK 161 (254)
T 4fn4_A 85 IDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG---KGVIVNTASIAGIRGGFAGAPYTVAK 161 (254)
T ss_dssp CCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEEechhhcCCCCCChHHHHHH
Confidence 999999999875357899999999999999999999999999999997653 46799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch----hHHhh-cC-CCCCCHHHHHHHHHHHHhcC--
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD----FYFKS-SK-QKVLHENDGLKLFEQLLIQD-- 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~----~~~~~-~g-~~~l~~~e~~~~l~~~l~~~-- 465 (1152)
+++.+|++.++.+.. ..++++.+|.+|... +.|......... ...+. .. -+.-.|+|...++..+++..
T Consensus 162 aal~~ltr~lA~ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~ 238 (254)
T 4fn4_A 162 HGLIGLTRSIAAHYG--DQGIRAVAVLPGTVK-TNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEAS 238 (254)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHhh--hhCeEEEEEEeCCCC-CcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 999999999998865 456788889888764 444322221111 11111 11 23458999999888877543
Q ss_pred --ceeeeeechhh
Q psy616 466 --KIQYLVLSGEL 476 (1152)
Q Consensus 466 --~~~~~v~~~~~ 476 (1152)
..|.+.++|-+
T Consensus 239 ~iTG~~i~VDGG~ 251 (254)
T 4fn4_A 239 FVNGDAVVVDGGL 251 (254)
T ss_dssp TCCSCEEEESTTG
T ss_pred CCcCCEEEeCCCc
Confidence 23666666654
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=307.07 Aligned_cols=237 Identities=20% Similarity=0.206 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaCs 796 (1152)
++++++++++||+|||+++++++ ++++|...+++. ...+++++++.||+ +||+++|+++|+
T Consensus 33 ~~l~~~a~~~Al~dAgl~~~~id----~~~~g~~~~~~~-------------~~~~a~~va~~lgl~~~~p~~~v~~aCa 95 (395)
T 2ib8_A 33 TKLGSIAIQGAIEKAGIPKEEVK----EAYMGNVLQGGE-------------GQAPTRQAVLGAGLPISTPCTTINKVCA 95 (395)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS-------------CSCHHHHHHHHTTCCTTCCEEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC-------------CchHHHHHHHHcCCCCCceEEEeccccc
Confidence 57999999999999999988876 677876543321 12368999999999 899999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HH------------------HHHH-----------------HHhcC--
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMIS-PE------------------AYIA-----------------MTSAG-- 838 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~------------------~~~~-----------------~~~~g-- 838 (1152)
|+++||++|+++|++|+||++||||++.+.. |. .+.. ..+.|
T Consensus 96 S~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~s 175 (395)
T 2ib8_A 96 SGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIA 175 (395)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999996432 11 0000 01111
Q ss_pred -----------------------------------------CCCCCCCccc--CCC---------CCCCcc-------cc
Q psy616 839 -----------------------------------------MLSPDGKCYV--FDE---------RANGLV-------PS 859 (1152)
Q Consensus 839 -----------------------------------------~ls~~g~~~~--Fd~---------~a~G~v-------~g 859 (1152)
+++.|+.+|+ ||. +++|++ ++
T Consensus 176 re~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~ 255 (395)
T 2ib8_A 176 RNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLN 255 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSCCCCTTTBCCCE
T ss_pred HHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccccCCCCCcccccCCccc
Confidence 2444555554 776 679999 99
Q ss_pred cccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy616 860 EAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP--NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937 (1152)
Q Consensus 860 EG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P--~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~g 937 (1152)
||++++||+++++|.++|++||++|+|++.++ +.| .+.+|..+++++|++||++|+||||||.|
T Consensus 256 dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-------~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~------- 321 (395)
T 2ib8_A 256 DGAAALVLMTADAAKRLNVTPLARIVAFADAA-------VEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVN------- 321 (395)
T ss_dssp EEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-------CCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEEC-------
T ss_pred cceeEEEEecHHHHHhcCCCccEEEEEEEEec-------cChhhccccHHHHHHHHHHHcCCCHHHcCEEEEc-------
Confidence 99999999999999999999999999999875 233 34678999999999999999999999965
Q ss_pred CHHHHHHHHHH--hcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhc
Q psy616 938 DPVEINALHDV--FKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 989 (1152)
Q Consensus 938 D~~E~~al~~~--f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~ 989 (1152)
|+.|..+|..+ |+-. ..++.+++.|.++||+.+|+|+.++++++++|++
T Consensus 322 D~f~~~~l~~~e~lg~~---~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 372 (395)
T 2ib8_A 322 EAFSLVVLANIKMLEID---PQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ 372 (395)
T ss_dssp CSBHHHHHHHHHHHTCC---GGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT
T ss_pred cccHHHHHHHHHHcCCC---ccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh
Confidence 88999999887 7643 2357889999999999999999999999999986
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=304.25 Aligned_cols=264 Identities=22% Similarity=0.279 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaC 795 (1152)
.++|+++++++||+|||+++++++ +||+|+...++. ....+..+++.+|+ +||+++|+++|
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id----~v~~g~~~~~~~-------------~~~~a~~~a~~lGl~~~~p~~~v~~aC 117 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLG----DICVGNVLQPGA-------------GAIMARIAQFLSDIPETVPLSTVNRQC 117 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----CEEEECSSSBGG-------------GHHHHHHHHHHTTCCTTSCEEEEECGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCccc-------------cccHHHHHHHHcCCCCCceEEEeCCCC
Confidence 378999999999999999988887 699997654321 12355567899999 89999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH--------------------HHHH--------------------
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA--------------------YIAM-------------------- 834 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~--------------------~~~~-------------------- 834 (1152)
+|+++||++|+++|++|+||++||||++.+.. |.. .+.+
T Consensus 118 ss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~gitre~~~~~a 197 (418)
T 2iik_A 118 SSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFA 197 (418)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhCCCHHHHHHHH
Confidence 99999999999999999999999999997643 100 0000
Q ss_pred ---------H-hcC-----------------------CCCCCCCccc-------------CCCCC-----CCcccccccE
Q psy616 835 ---------T-SAG-----------------------MLSPDGKCYV-------------FDERA-----NGLVPSEAVV 863 (1152)
Q Consensus 835 ---------~-~~g-----------------------~ls~~g~~~~-------------Fd~~a-----~G~v~gEG~~ 863 (1152)
. ..+ .+++|+.||| ||.++ ||++++||++
T Consensus 198 ~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~~d~~~~~DGAa 277 (418)
T 2iik_A 198 LASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAA 277 (418)
T ss_dssp HHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCSTTBCCCEEEEE
T ss_pred HHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCceeeccccCCCCCce
Confidence 0 111 2566889999 99886 9999999999
Q ss_pred EEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy616 864 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 943 (1152)
Q Consensus 864 ~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~ 943 (1152)
++||+++++|.++|++|+++|+|++.+++.. .+.+.++..++++||++||++|+||||||+|++. ..+|.+|++
T Consensus 278 avvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af-~~~~~~~~~ 351 (418)
T 2iik_A 278 AILLARRSKAEELGLPILGVLRSYAVVGVPP-----DIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAF-ASQAAYCVE 351 (418)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCG-----GGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSB-HHHHHHHHH
T ss_pred EEEEecHHHHHhcCCCceEEEEEEEeccCCc-----hhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccc-hHHHHHHHH
Confidence 9999999999999999999999999886321 1224578899999999999999999999999854 478999998
Q ss_pred HHHHHhcccCCCCCceeeeccC--CCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccc
Q psy616 944 ALHDVFKNKTYNQKFCAITSNK--SNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 1021 (1152)
Q Consensus 944 al~~~f~~~~~~~~~~~igsvK--sniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w 1021 (1152)
+|. |.. .+|.+.| .++||+.+|+|+..+++++++|+++
T Consensus 352 ~lg--~~~-------~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~------------------------------- 391 (418)
T 2iik_A 352 KLR--LPP-------EKVNPLGGAVALGHPLGCTGARQVITLLNELKRR------------------------------- 391 (418)
T ss_dssp HHT--CCG-------GGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-------------------------------
T ss_pred HcC--CCc-------cccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc-------------------------------
Confidence 885 221 1343334 4689999999999999999999882
Q ss_pred cccCCCcc-EEEEcCcCCCcceEEEEEcc
Q psy616 1022 NTVNEKLR-IGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1022 ~~~~~~~r-~a~v~sfG~gG~nah~il~~ 1049 (1152)
..| ++.++..+.||....+|||.
T Consensus 392 -----~~~~~gl~~~c~ggG~g~a~~~e~ 415 (418)
T 2iik_A 392 -----GKRAYGVVSMCIGTGMGAAAVFEY 415 (418)
T ss_dssp -----TSCEEEEEEEEETTTEEEEEEEEE
T ss_pred -----CCCeeeEEEEeeccchhheEEEec
Confidence 113 56677777789999999985
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=304.21 Aligned_cols=265 Identities=17% Similarity=0.192 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaCs 796 (1152)
..|+++++++||+|||+++++++ +|++|+...++. ...++.++++.+|+ ++|+++|+++|+
T Consensus 32 ~~L~~~A~~~AL~~agl~~~dId----~vi~g~~~~~~~-------------~~~~a~~v~~~lGl~~~~p~~~v~~aCs 94 (396)
T 4dd5_A 32 VELGVTAAKEAIKRANITPDMID----ESLLGGVLTAGL-------------GQNIARQIALGAGIPVEKPAMTINIVCG 94 (396)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCC----EEEEECSCCTTS-------------CSCHHHHHHHHTTCCTTSCEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCCCC-------------CchHHHHHHHHcCCCCCceEEEeccccH
Confidence 56899999999999999999987 799987654321 12368899999999 589999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHH---------------------------------------------
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAY--------------------------------------------- 831 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~--------------------------------------------- 831 (1152)
|++.||++|+++|++|+||.+||+|++.+..+...
T Consensus 95 s~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g 174 (396)
T 4dd5_A 95 SGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWN 174 (396)
T ss_dssp HHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhC
Confidence 99999999999999999999999999875541000
Q ss_pred ---------H--------HHHhcC------------------CCCCCCCccc-------------CCC-----CCCCccc
Q psy616 832 ---------I--------AMTSAG------------------MLSPDGKCYV-------------FDE-----RANGLVP 858 (1152)
Q Consensus 832 ---------~--------~~~~~g------------------~ls~~g~~~~-------------Fd~-----~a~G~v~ 858 (1152)
. .-...| .+++|..+|+ |+. ..|+..+
T Consensus 175 ~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~~~~~~~ 254 (396)
T 4dd5_A 175 ITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGI 254 (396)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTTBCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeecCCCCCc
Confidence 0 000011 2456666664 553 3667778
Q ss_pred ccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy616 859 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 938 (1152)
Q Consensus 859 gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD 938 (1152)
+||++++||+++++|.++|++|+++|+|++++++. +.|.+.+|..+++++|++||++|+||+|||+|.+.
T Consensus 255 ~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f----- 324 (396)
T 4dd5_A 255 NDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVD-----PKIMGYGPVPATKKALEAANMTIEDIDLVEANEAF----- 324 (396)
T ss_dssp EEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSB-----
T ss_pred CcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCC-----CCcccHHHHHHHHHHHHHcCCCHHHcCEEEecChH-----
Confidence 99999999999999999999999999999998863 23445679999999999999999999999998764
Q ss_pred HHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecccc
Q psy616 939 PVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSN 1018 (1152)
Q Consensus 939 ~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~ 1018 (1152)
.+|..++.+.|+-.. .++.+++.|.++||+++|+|+.+++|++++|+++
T Consensus 325 ~~~~~~~~~~lg~~~---~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------------------- 373 (396)
T 4dd5_A 325 AAQSVAVIRDLNIDM---NKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR---------------------------- 373 (396)
T ss_dssp HHHHHHHHHHHTCCT---TSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH----------------------------
T ss_pred HHHHHHHHHHhCCCC---CccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc----------------------------
Confidence 378888888887432 4578999999999999999999999999999983
Q ss_pred ccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1019 KKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1019 ~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..|+++++..+-||....+|||.
T Consensus 374 --------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 --------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp --------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred --------CCCeEEEEEcccCCceeEEEEeC
Confidence 23678888888999999999973
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-30 Score=305.15 Aligned_cols=266 Identities=17% Similarity=0.182 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaC 795 (1152)
...|+++++++||+|||+++++++ +|++|+...++. ....+.++++.+|+ ++|+++|+++|
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id----~v~~g~~~~~~~-------------~~~~a~~i~~~lGl~~~~p~~~v~~aC 91 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVD----EVILGHCIQRTD-------------EANTARTAALAAGFPDTVTGYTIQRQC 91 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECSSCCGG-------------GCSHHHHHHHHTTCCTTCEEEEEECGG
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCC----EEEEEEccCCCc-------------cchHHHHHHHHcCCCCCceEEEecCcc
Confidence 356999999999999999999988 789987654321 12357889999999 69999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHH---------------------------------------------
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEA--------------------------------------------- 830 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~--------------------------------------------- 830 (1152)
+|++.||++|+++|++|+||.+||+|++.+.....
T Consensus 92 ss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 171 (394)
T 3ss6_A 92 SSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYE 171 (394)
T ss_dssp GHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHHHHHHHHHhC
Confidence 99999999999999999999999999987543110
Q ss_pred --------HHHHH--------hcC------------------CCCCCCCccc-------------CCC-----CCCCccc
Q psy616 831 --------YIAMT--------SAG------------------MLSPDGKCYV-------------FDE-----RANGLVP 858 (1152)
Q Consensus 831 --------~~~~~--------~~g------------------~ls~~g~~~~-------------Fd~-----~a~G~v~ 858 (1152)
+...+ ..| ++++|+.||+ ||. ..|+..+
T Consensus 172 ~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~~~~~~~ 251 (394)
T 3ss6_A 172 ITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAGNASGL 251 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBSTTBCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceecCccCCc
Confidence 00000 000 4788888886 874 3678888
Q ss_pred ccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy616 859 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 938 (1152)
Q Consensus 859 gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD 938 (1152)
+||++++||+++++|.++|++|+++|+|+++++.. +.+.+.+|..+++++|+++|++|+||||||.|.+.
T Consensus 252 ~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~agl~~~dId~ve~~d~f----- 321 (394)
T 3ss6_A 252 NDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVD-----PKIMGIGPAPAIRKGLEKVDWSLEDADLLEINEAF----- 321 (394)
T ss_dssp EEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSB-----
T ss_pred ccceeEEEeccHHHHHHCCCCceEEEEEEEEecCC-----CccchHHHHHHHHHHHHHcCCCHHHcCEEEeCCch-----
Confidence 99999999999999999999999999999998632 12334578999999999999999999999998553
Q ss_pred HHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecccc
Q psy616 939 PVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSN 1018 (1152)
Q Consensus 939 ~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~ 1018 (1152)
.+|..++.+.|+-.. .++.+++.|.++||+.+|+|+.+++|++++|+++
T Consensus 322 a~~~~~~~~~lg~~~---~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------------------- 370 (394)
T 3ss6_A 322 AAQYLAVEKELDLDR---EKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR---------------------------- 370 (394)
T ss_dssp HHHHHHHHHHHTCCG---GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH----------------------------
T ss_pred HHHHHHHHHHhCCCC---CCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc----------------------------
Confidence 389999999997532 3578999999999999999999999999999983
Q ss_pred ccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1019 KKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1019 ~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..|+++++-.+-||....+|||.
T Consensus 371 --------~~~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 371 --------GLEKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp --------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred --------CCCEEEEEEccCcCceeEEEEEc
Confidence 12567777777888899999874
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.8e-30 Score=299.22 Aligned_cols=265 Identities=17% Similarity=0.198 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaC 795 (1152)
.+.|+++++++||+|||+++++++ +|++|+...++. ...++.++++.+|+ ++|+++|+++|
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id----~v~~g~~~~~~~-------------~~~~a~~~~~~lGl~~~~p~~~v~~~C 91 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID----EVIIGNVLQTGL-------------GQNVARQIAINAGIPNSVPSYTVNKLC 91 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECCCCSST-------------TCCHHHHHHHHTTCCTTSCEEEECCGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC-------------cchHHHHHHHHcCCCCCceEEEccccc
Confidence 356999999999999999999988 789987543221 12367899999999 78999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHH--------------------------------H----------
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYI--------------------------------A---------- 833 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~--------------------------------~---------- 833 (1152)
+|++.||+.|+++|++|+||.+||+|++.+....... .
T Consensus 92 ss~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 171 (395)
T 4e1l_A 92 GSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKF 171 (395)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHHHHHHHHHh
Confidence 9999999999999999999999999998866532210 0
Q ss_pred ------------H--H------hcC-------------------CCCCCCCccc-------------CCC-----CCCCc
Q psy616 834 ------------M--T------SAG-------------------MLSPDGKCYV-------------FDE-----RANGL 856 (1152)
Q Consensus 834 ------------~--~------~~g-------------------~ls~~g~~~~-------------Fd~-----~a~G~ 856 (1152)
. . +.| ++++|+.+|+ |+. ..|+.
T Consensus 172 g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~t~~~~~ 251 (395)
T 4e1l_A 172 EFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNAS 251 (395)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTSBC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCeeCCcCC
Confidence 0 0 000 3567777775 663 35777
Q ss_pred ccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy616 857 VPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 936 (1152)
Q Consensus 857 v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~ 936 (1152)
.++||++++||+++++|.++|++|+++|+|++++++.. .+.+.+|..+++++|+++|++|+||||||+|...
T Consensus 252 ~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~ai~~al~~agl~~~dId~ve~~d~f--- 323 (395)
T 4e1l_A 252 GINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEP-----EVMGTGPIPATRKALKKAGLSINDIDLIEANEAF--- 323 (395)
T ss_dssp CCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCG-----GGTTCTHHHHHHHHHHHTTCCGGGCSEEEECCSB---
T ss_pred CccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCC-----CcchHHHHHHHHHHHHHcCCCHHHcCEEEecChh---
Confidence 88999999999999999999999999999999998642 2234468999999999999999999999988542
Q ss_pred CCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecc
Q psy616 937 GDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINK 1016 (1152)
Q Consensus 937 gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~ 1016 (1152)
.+|..++.+.|+-.. .++.+++.|.++||+++|+|+.+++|++++|+++
T Consensus 324 --a~~~~~~~~~lg~~~---~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~-------------------------- 372 (395)
T 4e1l_A 324 --AAQALAVKNELQIDS---SKLNVNGGAIALGHPIGASGARILVTLIYEMQKR-------------------------- 372 (395)
T ss_dssp --HHHHHHHHHHHTCCG---GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH--------------------------
T ss_pred --HHHHHHHHHHhCCCC---CCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc--------------------------
Confidence 388899999987532 3588999999999999999999999999999983
Q ss_pred ccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1017 SNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1017 ~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
..++++++..+-||....+|||
T Consensus 373 ----------~~~~gl~~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 373 ----------KVETGLATLCIGGGQGISMVVS 394 (395)
T ss_dssp ----------TCSEEEEEEESSTTEEEEEEEE
T ss_pred ----------CCCEEEEEEccCCCceEEEEEe
Confidence 1257778878888999999987
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-30 Score=297.95 Aligned_cols=273 Identities=16% Similarity=0.138 Sum_probs=212.9
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccc
Q psy616 715 MDPRQRHLLQESWLALEDA-GYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAI 791 (1152)
Q Consensus 715 mdpq~rl~L~~a~~AledA-G~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tv 791 (1152)
..++++|+++++++||+|| |+++++++ +|++|+...++. ....++.++++.+|+ ++|+++|
T Consensus 24 ~~~~~~L~~~a~~~Al~~a~gi~~~~Id----~v~~g~~~~~~~------------~~~~~a~~~~~~~Gl~~~~p~~~v 87 (387)
T 3goa_A 24 NVRAEDLSAHLMRSLLARNPSLTAATLD----DIYWGCVQQTLE------------QGFNIARNAALLAEIPHSVPAVTV 87 (387)
T ss_dssp TSCHHHHHHHHHHHHHHHCTTSCGGGCC----EEEEECSCCSBT------------TTTTHHHHHHHHTTCCTTSCCEEE
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcC----EEEEEcccCCcc------------cccHHHHHHHHHcCCCCCCcEeEe
Confidence 4567889999999999999 99999988 799997654321 012467899999999 6899999
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHH--------------------------------------HHH
Q psy616 792 NTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEA--------------------------------------YIA 833 (1152)
Q Consensus 792 dtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~--------------------------------------~~~ 833 (1152)
+++|+|++.||++|+++|++|+||.+||+|++.+..+.. ...
T Consensus 88 ~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~ 167 (387)
T 3goa_A 88 NRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGISREMQDQ 167 (387)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHHHTTCCHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHHHhCCCHHHHHH
Confidence 999999999999999999999999999999996543210 000
Q ss_pred H-----------Hhc-------------------CCCCCCCCccc-------------CCC------CCCCcccccccEE
Q psy616 834 M-----------TSA-------------------GMLSPDGKCYV-------------FDE------RANGLVPSEAVVA 864 (1152)
Q Consensus 834 ~-----------~~~-------------------g~ls~~g~~~~-------------Fd~------~a~G~v~gEG~~~ 864 (1152)
+ ... ..+++|+.+|+ |+. ..|+..++||+++
T Consensus 168 ~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaa 247 (387)
T 3goa_A 168 FAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAA 247 (387)
T ss_dssp HHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEE
T ss_pred HHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEEE
Confidence 0 000 13566777776 775 3678889999999
Q ss_pred EEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHH
Q psy616 865 VVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINA 944 (1152)
Q Consensus 865 vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~a 944 (1152)
+||+++++|.++|++|+++|+|+++++|+.... ..++..+++++|++||++|+||||||+|++.|. .|+..
T Consensus 248 vvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~-----~~~~~~a~~~al~~agl~~~did~ve~h~~f~~----~~~~~ 318 (387)
T 3goa_A 248 MLVMSESRARELGLKPRARIRSMAVVGCDPSIM-----GYGPVPASKLALKKAGLSASDIDVFEMNEAFAA----QILPC 318 (387)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECCTTST-----TCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH----HHHHH
T ss_pred EEEecHHHHHHcCCCccEEEEEEEEcCCCCCcc-----hHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchH----HHHHH
Confidence 999999999999999999999999999875432 335689999999999999999999999999885 34444
Q ss_pred HHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecccccccccc
Q psy616 945 LHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTV 1024 (1152)
Q Consensus 945 l~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~ 1024 (1152)
+ +.|+--.....++.+.+.|..+||+++|+|+.++++++++|+++
T Consensus 319 ~-~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------------------------- 363 (387)
T 3goa_A 319 I-KDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK---------------------------------- 363 (387)
T ss_dssp H-HHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------------
T ss_pred H-HHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc----------------------------------
Confidence 3 33432110112355666677799999999999999999999972
Q ss_pred CCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1025 NEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1025 ~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..|+++++..+-||....+|||.
T Consensus 364 --~~~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 364 --DAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp --TCSEEEEEEEETTTEEEEEEEEC
T ss_pred --CCCEEEEEeccCcCceEEEEEEe
Confidence 12566666656678888899874
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-31 Score=323.78 Aligned_cols=383 Identities=10% Similarity=0.009 Sum_probs=269.3
Q ss_pred cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Cccccc
Q psy616 714 RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAIN 792 (1152)
Q Consensus 714 ~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvd 792 (1152)
.++|.+ |+.+++.+||+|||+++++++.--.|++++........ ..........++..++..+|+.+ |.++++
T Consensus 39 ~~s~~d-L~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~-----~~~~~g~~~~~~~~va~~lGl~~~~~~~~~ 112 (520)
T 4egv_A 39 GMSSVE-LATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGP-----ASAPLGVSSNYPRSVARNIGADPAHAVLEV 112 (520)
T ss_dssp CCCHHH-HHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC-------------------CCHHHHHHHHHTCCCSEEEECC
T ss_pred CCCHHH-HHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccch-----hhhhhccccCHHHHHHHHcCCCCceEEEec
Confidence 344533 78899999999999998887644445554432211100 01111122345677888999987 778899
Q ss_pred ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhc-----------------------------------
Q psy616 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSA----------------------------------- 837 (1152)
Q Consensus 793 taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~----------------------------------- 837 (1152)
.+|+|++.+|++|+++|++|+||++|+||++.+.+...+......
T Consensus 113 ~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~ 192 (520)
T 4egv_A 113 IGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYTIRHGLIGAP 192 (520)
T ss_dssp SSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTTGGGTCCSHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHHHHhCCCcHH
Confidence 999999999999999999999999999999986432211100000
Q ss_pred --------------C---------------------CCCCCCC--------------------cccCCCCCCCccccccc
Q psy616 838 --------------G---------------------MLSPDGK--------------------CYVFDERANGLVPSEAV 862 (1152)
Q Consensus 838 --------------g---------------------~ls~~g~--------------------~~~Fd~~a~G~v~gEG~ 862 (1152)
+ ...|+.. +-|+-.-.|....++|+
T Consensus 193 ~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGA 272 (520)
T 4egv_A 193 VQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQG 272 (520)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEE
T ss_pred HHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcce
Confidence 0 0001110 11122223455578999
Q ss_pred EEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCC---HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCH
Q psy616 863 VAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPN---GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 939 (1152)
Q Consensus 863 ~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~---~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~ 939 (1152)
+++||.+.+.|.+.|.++.+.|++++.+.......+..|+ ..++..+++++|++||++++|||++|.|... +
T Consensus 273 AAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF-----~ 347 (520)
T 4egv_A 273 AALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCF-----P 347 (520)
T ss_dssp EEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSS-----S
T ss_pred EEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCc-----H
Confidence 9999999999999999999999888877654433333343 5689999999999999999999999999643 4
Q ss_pred HHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccc
Q psy616 940 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNK 1019 (1152)
Q Consensus 940 ~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~ 1019 (1152)
++..+..+.++-......++.+++.+.++||+.+|+|+.+++|++.+|+++..+..++ .+|+.+++..+.+.+.++++
T Consensus 348 ~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~~~~~l~~~~~ 425 (520)
T 4egv_A 348 FPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKYSVGIYSTEPA 425 (520)
T ss_dssp HHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEEEEEEEESSCC
T ss_pred HHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeeeeEEEEcCCCC
Confidence 6777777777754434456778777777999999999999999999999999988776 69999999999999999999
Q ss_pred cccccCCCccEEEEcCcCCCcceEEEEEccccccccccCCCCCccCCCCcEEEEeecCCHHHHHHHH----HHHHHHHHh
Q psy616 1020 KWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYISTNFKNIKNNTFISSNPYHMVVLSAKTKISLKEKM----KQILLFLRK 1095 (1152)
Q Consensus 1020 ~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~~~~l~~lSa~~~~~l~~~~----~~l~~~l~~ 1095 (1152)
+|+.. +.+|+++|+| +|+|+||++.+....... ..+......+...+||+|+++.|+.++ ..+...+..
T Consensus 426 ~w~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~-~~t~~~~~~~~~~~~~~r~~~~~R~~A~~~~~~~~~~~~~ 498 (520)
T 4egv_A 426 DWVAD-NSAQLQAEHD-----AQPKVAITEKADGTGTIE-TYTVRYDWTPHTGIIIGRLDDGSRFLAKTKDEDLVKLLSE 498 (520)
T ss_dssp CCCCC-CHHHHHHHHH-----TSCCCCBCSSCCEEEEEE-EEEEESSEESCEEEEEEECSSCCEEEEEECCHHHHHHHHH
T ss_pred CCCCC-CCCccccccc-----CCCCcccccCCCCCCCCC-CCCcCCCCCcceEEEEEECchhhHhhhcCCCHHHHhhccC
Confidence 99875 4567778887 999999998764321100 000011122356789999999887665 334444433
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEE
Q psy616 1096 NNTVCIENFVYTLMQGRHHFQYRCAI 1121 (1152)
Q Consensus 1096 ~~~~~l~d~a~tl~~~r~~~~~R~a~ 1121 (1152)
.+ .+.+++.+.|..+.+|+++
T Consensus 499 ~~-----~~g~~~~~~~~~~~~ra~~ 519 (520)
T 4egv_A 499 GD-----PIGAKIVVTPGEKSNRAVL 519 (520)
T ss_dssp SC-----CTTCEEEEECCSSCCEEEE
T ss_pred cC-----cccCeEEEeccCCCccccc
Confidence 22 2778899999999999876
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-29 Score=273.09 Aligned_cols=235 Identities=14% Similarity=0.122 Sum_probs=192.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||++|||+++|+.|+++|++ |++.+|+ +..++..+++++.|.++.+++||++|+++++++++++.++||+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~-Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGAR-VILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 6899999999999999999999999985 5555665 5557778889888999999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||+.. ..++.+++.|+|++++++|+.|++++.|++.|+|++. ...+.||++||+++..+.++++.|+++|
T Consensus 87 iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~~~G~IVnisS~~~~~~~~~~~~Y~asK 163 (255)
T 4g81_D 87 VDILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR--NSGGKIINIGSLTSQAARPTVAPYTAAK 163 (255)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred CcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--cCCCEEEEEeehhhcCCCCCchhHHHHH
Confidence 999999999988 7899999999999999999999999999999998653 2346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC----
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD---- 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~---- 465 (1152)
+++.+|++.++.+.. ..++++.+|.+|... +.|..... .......+...+ +.-+|+|...++..+++..
T Consensus 164 aal~~ltr~lA~ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~i 240 (255)
T 4g81_D 164 GGIKMLTCSMAAEWA--QFNIQTNAIGPGYIL-TDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYI 240 (255)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEeeCCCC-CchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence 999999999988765 456788899888765 44432211 111112222222 3457899999888776543
Q ss_pred ceeeeeechhh
Q psy616 466 KIQYLVLSGEL 476 (1152)
Q Consensus 466 ~~~~~v~~~~~ 476 (1152)
..+.+.++|-|
T Consensus 241 TG~~i~VDGG~ 251 (255)
T 4g81_D 241 NGQIIYVDGGW 251 (255)
T ss_dssp CSCEEEESTTG
T ss_pred cCCEEEECCCe
Confidence 23566666655
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=294.02 Aligned_cols=241 Identities=17% Similarity=0.161 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHhcC----CCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCccccc
Q psy616 719 QRHLLQESWLALEDAG----YGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAIN 792 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG----~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvd 792 (1152)
++|+++++++||+||| +++++++ +|++|+...++. ...++.++++.+|+ +||+++|+
T Consensus 36 ~~La~~Aa~~Al~~Ag~~~~l~~~~id----~v~~g~~~~~~~-------------~~~~a~~va~~lGl~~~~p~~~v~ 98 (393)
T 1afw_A 36 DYLLYNFLNEFIGRFPEPLRADLNLIE----EVACGNVLNVGA-------------GATEHRAACLASGIPYSTPFVALN 98 (393)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGGGCC----CEEEECSSSBGG-------------GHHHHHHHHHHTTCCTTSCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCCHHHCC----EEEEEecCCCCC-------------CChHHHHHHHHcCCCCCceEEEEc
Confidence 4689999999999999 9988876 699997654321 24679999999999 89999999
Q ss_pred ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcC-HHH-----------H------------HHHH-------------
Q psy616 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMIS-PEA-----------Y------------IAMT------------- 835 (1152)
Q Consensus 793 taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~-~~~-----------~------------~~~~------------- 835 (1152)
++|+|++.||++|+++|++|+||++||||++.+.. |.. + +...
T Consensus 99 ~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~g~sre 178 (393)
T 1afw_A 99 RQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRK 178 (393)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHH
T ss_pred CcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHHHHHHHhCcCHH
Confidence 99999999999999999999999999999996432 110 0 0000
Q ss_pred -----------------hcC---------------CCCCCCCcc------------c-CCCCCCCcc-------cccccE
Q psy616 836 -----------------SAG---------------MLSPDGKCY------------V-FDERANGLV-------PSEAVV 863 (1152)
Q Consensus 836 -----------------~~g---------------~ls~~g~~~------------~-Fd~~a~G~v-------~gEG~~ 863 (1152)
+.| ++++|+.|| | ||.++ |++ ++||++
T Consensus 179 ~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~-G~vt~~~~~~~~dGAa 257 (393)
T 1afw_A 179 DQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR-GTTTAGNASQVSDGVA 257 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----CCCBTTTBCCBEEEEE
T ss_pred HHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-CCeechhcCcccchhh
Confidence 011 256677655 5 98654 777 799999
Q ss_pred EEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q psy616 864 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEIN 943 (1152)
Q Consensus 864 ~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~ 943 (1152)
++||+++++|.++|+++|++|+|++.++|... +.+.++..+++++|++||++|+||||||+|+++|. .|+.
T Consensus 258 avvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~a~~~al~~Agl~~~dId~ve~h~~ft~----~~l~ 328 (393)
T 1afw_A 258 GVLLARRSVANQLNLPVLGRYIDFQTVGVPPE-----IMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA----QALY 328 (393)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCGG-----GGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH----HHHH
T ss_pred eeeEecHHHHHHcCCCccEEEEEEEEeccChh-----hcchhHHHHHHHHHHHcCCCHHHCCEEEEeccCHH----HHHH
Confidence 99999999999999999999999999988532 22457899999999999999999999999999995 6777
Q ss_pred HHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcC
Q psy616 944 ALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYK 990 (1152)
Q Consensus 944 al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~ 990 (1152)
.++. |+-.. .++.+.+-|..+||+.+|+|+..+++++++|+++
T Consensus 329 ~~~~-lg~~~---~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~ 371 (393)
T 1afw_A 329 CIHK-LGIDL---NKVNPRGGAIALGHPLGCTGARQVATILRELKKD 371 (393)
T ss_dssp HHHH-HTCCG---GGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT
T ss_pred HHHH-hCCCC---cCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhc
Confidence 7644 54321 1233333344589999999999999999999984
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=8e-30 Score=291.84 Aligned_cols=245 Identities=17% Similarity=0.151 Sum_probs=191.3
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccccccc
Q psy616 716 DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTAC 795 (1152)
Q Consensus 716 dpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaC 795 (1152)
++..+++++++++||+|||+++++++ +|++|+...++. . ...+++++..||+++|+++|+++|
T Consensus 48 ~~~~~la~~a~~~al~~ag~~~~~id----~vi~~~~~~~~~--------~-----~~~a~~v~~~lgl~~~~~~v~~aC 110 (322)
T 1ub7_A 48 EYTSDLAFKAVEDLLRRHPGALEGVD----AVIVATNTPDAL--------F-----PDTAALVQARFGLKAFAYDLLAGC 110 (322)
T ss_dssp CCHHHHHHHHHHHHHHHSTTTTTTEE----EEEEECSSCSEE--------E-----SCHHHHHHHHTTCCCEEEEEECST
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC--------C-----CcHHHHHHHHhCCCCEEEeeCccc
Confidence 56789999999999999999887765 688887653311 1 126889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhc
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 875 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~ 875 (1152)
+|++.||+.|++.|++|+||.+||+|++.+ ++. + .+|| +.+|+++|||++++||++.++
T Consensus 111 as~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~----------~------~~~d-~~~~~~~GdGA~A~vL~~~~~--- 169 (322)
T 1ub7_A 111 PGWIYALAQAHALVEAGLAQKVLAVGAEAL-SKI----------I------DWND-RATAVLFGDGGGAAVVGKVRE--- 169 (322)
T ss_dssp THHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGT----------S------CTTC-HHHHTTBCCEEEEEEEECCCT---
T ss_pred hHHHHHHHHHHHHHHcCCCCEEEEEEechh-ccc----------c------Chhh-cccceeeccccEEEEEEecCC---
Confidence 999999999999999999999999999973 431 1 2455 678999999999999998764
Q ss_pred CCCceEEEEEEEEEecCCCCC-CCC-------CCC-----------H--------HHHHHHHHHHHHHcCCCCCCccEEE
Q psy616 876 DGDPIHAIIRGSGINYDGKTN-GIT-------APN-----------G--------ISQTELIKSVYKKSNLNPEDINYII 928 (1152)
Q Consensus 876 dgd~i~avI~g~a~~~dG~~~-~~~-------~P~-----------~--------~~q~~~i~~al~~Agi~p~dI~yve 928 (1152)
+++|++.+ +..+|... .++ .|+ + ..+.++|+++|+++|++|+||+||+
T Consensus 170 -~~~i~~~~----~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~ 244 (322)
T 1ub7_A 170 -GYGFRSFV----LGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFV 244 (322)
T ss_dssp -TCEEEEEE----EEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred -CCceeEEE----EEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 45677654 23333211 110 132 3 6889999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccC
Q psy616 929 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008 (1152)
Q Consensus 929 ~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~ 1008 (1152)
+|+++|+..|. +.+.|+-... . +-++|+++||+.+|+++..|.++ ++++.+.
T Consensus 245 ~H~~~~~~~d~-----~~~~lg~~~~---~--~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~--------------- 296 (322)
T 1ub7_A 245 PHQANLRIIDA-----ARERLGLPWE---R--VAVNVDRYGNTSTASIPLALKEA---VDAGRIR--------------- 296 (322)
T ss_dssp ECCSCHHHHHH-----HHHTTTCCGG---G--BCCCHHHHCBCGGGHHHHHHHHH---HHHTSSC---------------
T ss_pred EcCCCHHHHHH-----HHHHcCCCHH---H--HHHHHHhhCcHHHHHHHHHHHHH---HHhCCCC---------------
Confidence 99999997764 5666764321 1 23789999999999999988764 4565441
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+.+++++++||+|++|+++||+-
T Consensus 297 ------------------~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 297 ------------------EGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp ------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred ------------------CCCEEEEEEEChhheeEEEEEEe
Confidence 12567899999999999999974
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=263.73 Aligned_cols=235 Identities=15% Similarity=0.152 Sum_probs=187.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|+++ ++.+|+....+..+++.+.+.++.+++||++|+++++++++++.++||+|
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~V-v~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i 84 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIP-VVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL 84 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEE-EEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEE-EEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999999854 45555544455667777788899999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. . ...+.+.|+|++++++|+.|++++.|+++|+|++. .+.||++||+++..|.++++.|+++|+
T Consensus 85 DiLVNnAGi~~-~-~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~----~G~IVnisS~~~~~~~~~~~~Y~asKa 158 (258)
T 4gkb_A 85 DGLVNNAGVND-G-IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT----RGAIVNISSKTAVTGQGNTSGYCASKG 158 (258)
T ss_dssp CEEEECCCCCC-C-CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCTHHHHCCSSCHHHHHHHH
T ss_pred CEEEECCCCCC-C-CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CCeEEEEeehhhccCCCCchHHHHHHH
Confidence 99999999865 3 34588999999999999999999999999999643 367999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-------ccchhHHhhc--CCCCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-------EQTDFYFKSS--KQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-------~~~~~~~~~~--g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|..... .......... |-+.-+|+|...++..+++..
T Consensus 159 av~~ltr~lA~ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~ 235 (258)
T 4gkb_A 159 AQLALTREWAVALR--EHGVRVNAVIPAEVM-TPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPR 235 (258)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECSBC-CSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEecCCCC-ChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCch
Confidence 99999999988765 456688888887664 44432211 1111112222 224568999999988877543
Q ss_pred ----ceeeeeechhhhHH
Q psy616 466 ----KIQYLVLSGELEKL 479 (1152)
Q Consensus 466 ----~~~~~v~~~~~~~~ 479 (1152)
..|.+.++|-|.++
T Consensus 236 a~~iTG~~i~VDGG~T~l 253 (258)
T 4gkb_A 236 ASHTTGEWLFVDGGYTHL 253 (258)
T ss_dssp GTTCCSCEEEESTTTTTS
T ss_pred hcCccCCeEEECCCcchh
Confidence 23777788887654
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=253.29 Aligned_cols=226 Identities=15% Similarity=0.093 Sum_probs=184.6
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+|++|||||++|||+++|+.|+++|++ |+++.|++ +..+++.+.+.++.+++||++|+++++++++++.++||+||
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~-V~~~~~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDK-VCFIDIDE---KRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCH---HHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999985 55555653 33455666678899999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
++|||||+.. ..++.+++.|+|++++++|+.|++++.|++.|+|++. .+.||++||+++..|.+++++|+++|++
T Consensus 78 iLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~----~G~IInisS~~~~~~~~~~~~Y~asKaa 152 (247)
T 3ged_A 78 VLVNNACRGS-KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN----KGRIINIASTRAFQSEPDSEAYASAKGG 152 (247)
T ss_dssp EEEECCCCCC-CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT----TCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred EEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc----CCcEEEEeecccccCCCCCHHHHHHHHH
Confidence 9999999988 7899999999999999999999999999999999752 3779999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC--ceeeeee
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD--KIQYLVL 472 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~--~~~~~v~ 472 (1152)
+.+|++.++.+.. .++++.+|.+|... +.|.... .....+...+ +.-+|+|...++..+++.. ..|.+.+
T Consensus 153 l~~ltk~lA~ela---~~IrVN~I~PG~i~-t~~~~~~---~~~~~~~~Pl~R~g~pediA~~v~fL~s~~~iTG~~i~V 225 (247)
T 3ged_A 153 IVALTHALAMSLG---PDVLVNCIAPGWIN-VTEQQEF---TQEDCAAIPAGKVGTPKDISNMVLFLCQQDFITGETIIV 225 (247)
T ss_dssp HHHHHHHHHHHHT---TTSEEEEEEECSBC-CCC---C---CHHHHHTSTTSSCBCHHHHHHHHHHHHHCSSCCSCEEEE
T ss_pred HHHHHHHHHHHHC---CCCEEEEEecCcCC-CCCcHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 9999999998753 26788899888664 4443221 2222233222 3458999999999888654 2366667
Q ss_pred chhhh
Q psy616 473 SGELE 477 (1152)
Q Consensus 473 ~~~~~ 477 (1152)
+|-+.
T Consensus 226 DGG~s 230 (247)
T 3ged_A 226 DGGMS 230 (247)
T ss_dssp STTGG
T ss_pred CcCHH
Confidence 76654
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.6e-29 Score=282.27 Aligned_cols=292 Identities=16% Similarity=0.151 Sum_probs=213.0
Q ss_pred cEEEEeeeeccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 632 LIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 632 ~IaIvGm~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++.|+|+++.+|.. .+.++||+.+. . ++ .|-. ..+||..+
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~------~~-~~i~------------------------------~~~Gi~~r 42 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMVD--T------SD-EWIV------------------------------TRTGIRER 42 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTSS--C------CH-HHHH------------------------------HHHCCCEE
T ss_pred CcEEEEEEEeCCCceecHHHHHHHhC--C------CH-HHHH------------------------------HHhCceEE
Confidence 47899999999984 56777775331 1 11 1110 11233332
Q ss_pred Hhh-cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCc
Q psy616 711 EAE-RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPV 788 (1152)
Q Consensus 711 ea~-~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs 788 (1152)
... ..++.++++++++++||+|||+++++++ +|++|+...++. ...+++++++.||++ ||+
T Consensus 43 ~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id----~vi~g~~~~~~~-------------~~~~a~~v~~~lgl~~~~~ 105 (317)
T 1hnj_A 43 HIAAPNETVSTMGFEAATRAIEMAGIEKDQIG----LIVVATTSATHA-------------FPSAACQIQSMLGIKGCPA 105 (317)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSCS-------------SSCHHHHHHHHHTCCSSCE
T ss_pred EecCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------CCcHHHHHHHHhCCCCCeE
Confidence 221 3578899999999999999999988776 788987654321 124689999999998 999
Q ss_pred ccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEc
Q psy616 789 MAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLK 868 (1152)
Q Consensus 789 ~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk 868 (1152)
++|+++|+|++.||+.|++.|++|+||.+||+|++.+ ++. +. |+...+|+++|||++++||+
T Consensus 106 ~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~----------~~-------~~d~~~~~~~GdGA~A~vL~ 167 (317)
T 1hnj_A 106 FDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVL-ART----------CD-------PTDRGTIIIFGDGAGAAVLA 167 (317)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECH-HHH----------SC-------TTCHHHHTTBCCEEEEEEEE
T ss_pred EeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechh-ccc----------CC-------chhcccceeeccccEEEEEE
Confidence 9999999999999999999999999999999999973 221 11 33345699999999999999
Q ss_pred ccchhhcCCCceEEEEEEEE-EecCCCC-----------CCCCCCCHH--------HHHHHHHHHHHHcCCCCCCccEEE
Q psy616 869 RLSRALSDGDPIHAIIRGSG-INYDGKT-----------NGITAPNGI--------SQTELIKSVYKKSNLNPEDINYII 928 (1152)
Q Consensus 869 ~l~~A~~dgd~i~avI~g~a-~~~dG~~-----------~~~~~P~~~--------~q~~~i~~al~~Agi~p~dI~yve 928 (1152)
+.++ ++|++++.++. ...|... ..+..+++. .+.++|+++|+++|++|+||+||+
T Consensus 168 ~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~ 242 (317)
T 1hnj_A 168 ASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLV 242 (317)
T ss_dssp EESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred ecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 8763 46888775521 1111111 011223455 789999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccC
Q psy616 929 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILK 1008 (1152)
Q Consensus 929 ~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~ 1008 (1152)
+|++||+++| ++.+.|+.... .+.++|+++||+.+|++...|..++ +.+.+.|
T Consensus 243 ~H~~~~~~~d-----~i~~~lg~~~~-----~~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~~~-------------- 295 (317)
T 1hnj_A 243 PHQANLRIIS-----ATAKKLGMSMD-----NVVVTLDRHGNTSAASVPCALDEAV---RDGRIKP-------------- 295 (317)
T ss_dssp ECCSCHHHHH-----HHHHHTTCCGG-----GBCCCHHHHCBCGGGHHHHHHHHHH---HTTCSCT--------------
T ss_pred EcCCCHHHHH-----HHHHHcCCCHH-----HhHhhHhhhCcHHHHHHHHHHHHHH---HhCCCCC--------------
Confidence 9999999866 46677764321 2347899999999999999887653 3433221
Q ss_pred CCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1009 NSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1009 ~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
-.+.++.+||.|.+...++|+
T Consensus 296 -------------------G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 296 -------------------GQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp -------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred -------------------CCEEEEEEEchhheeEEEEEE
Confidence 124578899999999998885
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-28 Score=278.14 Aligned_cols=244 Identities=19% Similarity=0.231 Sum_probs=192.1
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Cccccccc
Q psy616 716 DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTA 794 (1152)
Q Consensus 716 dpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdta 794 (1152)
++..+++++++++||+|||+++++++ +|++|+..+++. .+ .+++++++.||++| |+++|+++
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id----~v~~~~~~~~~~------------~~-~~a~~v~~~lgl~~~~~~~v~~~ 110 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELD----LIILATLTPQKR------------FP-STACLVQAQLKAKGVYAFDISAA 110 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCS----EEEEECSSCSSS------------SS-CHHHHHHHHHTCTTCEEEEEECG
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------CC-cHHHHHHHHhCCCCceEEecCcc
Confidence 67899999999999999999988876 899997654321 11 26899999999999 99999999
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhh
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 874 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~ 874 (1152)
|+|++.||+.|++.|++|+||.+||+|++.+.. .+ .|+...+|+++|||++++||++.+++
T Consensus 111 C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~-----------~~-------~~~~~~~~~~~gdGaaA~vL~~~~~~- 171 (309)
T 2ebd_A 111 CSGFIYALDIADSFIKSGKAKNVLVIGAEKLSE-----------AV-------DWEDRSTCVLFGDGAGAVVVTRSEDK- 171 (309)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-----------TC-------CTTCTTTTTTBCEEEEEEEEEECSSS-
T ss_pred chHHHHHHHHHHHHHHCCCCCEEEEEEeccccc-----------cc-------CccchhhccccccccEEEEEEecCCC-
Confidence 999999999999999999999999999997421 11 13456789999999999999988764
Q ss_pred cCCCceEEEEEEEEEecCCCC-CCCCCC-------CHH--------HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy616 875 SDGDPIHAIIRGSGINYDGKT-NGITAP-------NGI--------SQTELIKSVYKKSNLNPEDINYIITHGTGTKLGD 938 (1152)
Q Consensus 875 ~dgd~i~avI~g~a~~~dG~~-~~~~~P-------~~~--------~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD 938 (1152)
..|++++ +++||.. ..++.| ++. .+.++++++|+++|++|+||+||++|++||+..|
T Consensus 172 ---~~i~~~~----~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~ 244 (309)
T 2ebd_A 172 ---SDILATR----MYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIIN 244 (309)
T ss_dssp ---CEEEEEE----EEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHH
T ss_pred ---CceeEEE----EEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHH
Confidence 2365543 5566642 233444 554 7889999999999999999999999999998755
Q ss_pred HHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecccc
Q psy616 939 PVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSN 1018 (1152)
Q Consensus 939 ~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~ 1018 (1152)
++.+.|+-... .+ -++|+++||+.+|+++.+|.+++. .+.+.|
T Consensus 245 -----~~~~~lg~~~~---~~--~~~~~~~Gh~~~As~~~~L~~~~~---~g~~~~------------------------ 287 (309)
T 2ebd_A 245 -----ALAEKLNIPKE---KV--FVNIQKYGNTSAASIPIALHEAIK---EGKVKR------------------------ 287 (309)
T ss_dssp -----HHHHHTTCCGG---GB--CCCHHHHCBCGGGHHHHHHHHHHH---TTCCCT------------------------
T ss_pred -----HHHHHhCCCHH---Hh--hhhHhhhcchHHHHHHHHHHHHHH---cCCCCC------------------------
Confidence 46677764321 12 367999999999999999988743 232211
Q ss_pred ccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1019 KKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1019 ~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
-.+.++.+||.|.+...++|+
T Consensus 288 ---------G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 288 ---------GDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ---------TCEEEEEEEETTTEEEEEEEE
T ss_pred ---------CCEEEEEEEchhhhhEEEEEE
Confidence 135678999999999999985
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=256.02 Aligned_cols=229 Identities=15% Similarity=0.088 Sum_probs=182.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|+++ ++..|+.. ++..+++++.|.++.+++||++|++++++++ ++|+|
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~V-vi~~r~~~-~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~-----~~g~i 80 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEV-VCAARRAP-DETLDIIAKDGGNASALLIDFADPLAAKDSF-----TDAGF 80 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEE-EEEESSCC-HHHHHHHHHTTCCEEEEECCTTSTTTTTTSS-----TTTCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEE-EEEeCCcH-HHHHHHHHHhCCcEEEEEccCCCHHHHHHHH-----HhCCC
Confidence 69999999999999999999999999955 45556543 5677888889999999999999998887665 35899
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+++.++|++++++|+.|++++.|++.|+|++. ...+.||++||+++..|.+++++|+++|+
T Consensus 81 DiLVNNAGi~~-~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~--g~~G~IVnisS~~~~~g~~~~~~Y~asKa 157 (247)
T 4hp8_A 81 DILVNNAGIIR-RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAK--GRSGKVVNIASLLSFQGGIRVPSYTAAKH 157 (247)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEECCGGGTSCCSSCHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHh--CCCcEEEEEechhhCCCCCCChHHHHHHH
Confidence 99999999988 7899999999999999999999999999999998653 23568999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc----
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK---- 466 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~---- 466 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|...... ......+...+ +.-.|+|...++..+.+...
T Consensus 158 av~~ltr~lA~Ela--~~gIrVNaV~PG~i~-T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iT 234 (247)
T 4hp8_A 158 GVAGLTKLLANEWA--AKGINVNAIAPGYIE-TNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVH 234 (247)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCC
T ss_pred HHHHHHHHHHHHHh--hcCeEEEEEeeCCCC-CcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence 99999999988765 456788899888775 445322111 11112222222 23478999998887664332
Q ss_pred eeeeeechhh
Q psy616 467 IQYLVLSGEL 476 (1152)
Q Consensus 467 ~~~~v~~~~~ 476 (1152)
.+.+.++|-|
T Consensus 235 G~~i~VDGG~ 244 (247)
T 4hp8_A 235 GAILNVDGGW 244 (247)
T ss_dssp SCEEEESTTG
T ss_pred CCeEEECccc
Confidence 3566666654
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-27 Score=259.11 Aligned_cols=231 Identities=14% Similarity=0.099 Sum_probs=181.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+. +.+.+..++.|.++.+++||++|+++++++++++.++||+|
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~-V~i~~r~~--~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGAR-VFITGRRK--DVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH--HHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCE-EEEEECCH--HHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999999995 55556653 22233344457888999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+++.|+|++++++|+.|++++.|+++|+|++ .+.||++||+++..|.++++.|+++|+
T Consensus 105 DiLVNNAG~~~-~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-----~G~IInisS~~~~~~~~~~~~Y~asKa 178 (273)
T 4fgs_A 105 DVLFVNAGGGS-MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR-----GSSVVLTGSTAGSTGTPAFSVYAASKA 178 (273)
T ss_dssp EEEEECCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-----EEEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh-----CCeEEEEeehhhccCCCCchHHHHHHH
Confidence 99999999987 789999999999999999999999999999999742 357999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---cc----chhHHhhcCC-CCCCHHHHHHHHHHHHhcC-
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQ----TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD- 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~----~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~- 465 (1152)
++.+|++.++.+.. ..++++.+|.+|.....++..... .. .....+...+ +.-+|+|...++..+++..
T Consensus 179 av~~ltr~lA~Ela--~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a 256 (273)
T 4fgs_A 179 ALRSFARNWILDLK--DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDS 256 (273)
T ss_dssp HHHHHHHHHHHHTT--TSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999998865 556788899988775433221100 00 1111222222 3457999999888877543
Q ss_pred ---ceeeeeechhh
Q psy616 466 ---KIQYLVLSGEL 476 (1152)
Q Consensus 466 ---~~~~~v~~~~~ 476 (1152)
..+.+.++|-+
T Consensus 257 ~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 257 SFVTGAELFVDGGS 270 (273)
T ss_dssp TTCCSCEEEESTTT
T ss_pred cCccCCeEeECcCh
Confidence 23566666654
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-28 Score=279.99 Aligned_cols=292 Identities=16% Similarity=0.137 Sum_probs=213.4
Q ss_pred CCcEEEEeeeeccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCC
Q psy616 630 EELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 708 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 708 (1152)
..++.|+||++.+|.. .+.++||+.+.. + ++|-. .++||.
T Consensus 9 ~~~~~I~gig~~~P~~~~~~~~~~~~~~~--------~-~~~i~------------------------------~~~Gi~ 49 (339)
T 1mzj_A 9 RRFSRVLGVGSYRPRREVSNKEVCTWIDS--------T-EEWIE------------------------------TRTGIR 49 (339)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHTTTSSC--------C-HHHHH------------------------------HHHCCS
T ss_pred cCceEEEEEEEeCCCccccHHHHHHHhCC--------C-HHHHH------------------------------HhcCce
Confidence 3569999999999986 567888865321 1 11210 112233
Q ss_pred HHHhh-cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-C
Q psy616 709 PLEAE-RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-G 786 (1152)
Q Consensus 709 ~~ea~-~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-G 786 (1152)
.+... ..++.++++++++++||+|||+++++++ +|++|+..+++. . + ..++++++.||++ +
T Consensus 50 ~R~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id----~vi~gt~~~~~~--------~----p-~~a~~v~~~lgl~~~ 112 (339)
T 1mzj_A 50 SRRIAEPDETIQVMGVAASRRALEHAGVDPAEID----LVVVSTMTNFVH--------T----P-PLSVAIAHELGADNA 112 (339)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCC--------S----S-CHHHHHHHHHTCTTC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC--------C----C-hHHHHHHHHhCCCCc
Confidence 33222 2467899999999999999999988876 799997665431 1 1 1678999999998 7
Q ss_pred CcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEE
Q psy616 787 PVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVV 866 (1152)
Q Consensus 787 Ps~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vv 866 (1152)
|+++|+++|+|++.||++|++.|++|+||.+||+|++.+ ++. +. ++...+|+++|||++++|
T Consensus 113 ~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~-s~~----------~~-------~~d~~~~~~~GdGA~A~v 174 (339)
T 1mzj_A 113 GGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM-TDV----------ID-------LADRSLSFLFGDGAGAAV 174 (339)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEG-GGG----------SC-------SSCTTTTTTBCEEEEEEE
T ss_pred cEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEccc-ccc----------cC-------ccccccceEeccCceEEE
Confidence 999999999999999999999999999999999999984 332 11 223578999999999999
Q ss_pred EcccchhhcCCCceEEEEEEEEEecCCCCC-CCC----CCC---------------H--------HHHHHHHHHHHHHcC
Q psy616 867 LKRLSRALSDGDPIHAIIRGSGINYDGKTN-GIT----APN---------------G--------ISQTELIKSVYKKSN 918 (1152)
Q Consensus 867 Lk~l~~A~~dgd~i~avI~g~a~~~dG~~~-~~~----~P~---------------~--------~~q~~~i~~al~~Ag 918 (1152)
|++.+. ++|++. .+++||... .++ .|+ + ..+.++|+++|+++|
T Consensus 175 L~~~~~-----~~i~~~----~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~ag 245 (339)
T 1mzj_A 175 VGPSDV-----PGIGPV----VRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAG 245 (339)
T ss_dssp EEEESS-----CCBCCC----EEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEecCC-----CCeEEE----EEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 998753 456654 234444321 111 122 2 678899999999999
Q ss_pred CCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCC
Q psy616 919 LNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHC 998 (1152)
Q Consensus 919 i~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~ 998 (1152)
++|+||+||++|++||+++|. +.+.|+-.. ...+. .+ +.++||+.+|++...|.+++ +.+.+.
T Consensus 246 l~~~did~v~~H~~~~~~~d~-----i~~~lg~~~--~~~~~-~~-~~~~Gn~~sAs~~~~L~~~~---~~g~~~----- 308 (339)
T 1mzj_A 246 LTVGDLVAFVPHQANLRIIDV-----LVDRLGVPE--HVVVS-RD-AEDTGNTSSASVALALDRLV---RSGAVP----- 308 (339)
T ss_dssp CCGGGCSEEEECCSCHHHHHH-----HHHHHTCCT--TSEEC-CT-HHHHCBCTTHHHHHHHHHHH---HHTSSC-----
T ss_pred CCHHHCCEEEECCCCHHHHHH-----HHHHhCCCc--cceee-eh-hhhcCchHHHHHHHHHHHHH---HcCCCC-----
Confidence 999999999999999998885 455665422 10232 33 46899999999999887664 333221
Q ss_pred CCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 999 EKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 999 ~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+-.+.++.+||.|++.+.++|+-
T Consensus 309 ----------------------------~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 309 ----------------------------GGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp ----------------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred ----------------------------CCCEEEEEEEchhheeEEEEEEe
Confidence 11356789999999999999974
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-25 Score=271.95 Aligned_cols=426 Identities=13% Similarity=0.092 Sum_probs=280.9
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCC-----------c----cccccCCCccEEEcCCChhhHHHHHHHH
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSD-----------N----IKISPNDTVHYKINKDNINDYTFILNKI 90 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~-----------~----~~~~~~~~~~~~i~p~~~~d~~~l~~~l 90 (1152)
.++.+||.....|++.++++.|.++|. |++..... . ..+... ......+..+.++.+++++++
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~-g~~~~~d~~d~~~~~~~v~~~ 85 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN-GGVAVADYNNVLDGDKIVETA 85 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT-TCEEEEECCCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc-CCeEEEEcCCHHHHHHHHHHH
Confidence 456788888899999999999988876 44432211 0 001111 122456788888889999999
Q ss_pred HhcCCCcCEEEEeCCCCCccc-----cc--------ChHHHHHHHHHHHhC---CCCceEEEEEccccccc-CCccchhh
Q psy616 91 YEKDKKIDSVFYLWPLEDKNC-----IY--------NIMPIIYFLQAVKKS---KLYLRKLIISGISINKK-NEEDLYYC 153 (1152)
Q Consensus 91 ~~~~~~~~~iv~lw~~~~~~~-----~~--------~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~-~~~~~~~~ 153 (1152)
.+..+.+|.+|+.-+...... .+ ++.+.+++.|++... ....+++.++..+.... .....+..
T Consensus 86 ~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~a 165 (604)
T 2et6_A 86 VKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYAS 165 (604)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHH
Confidence 888888999999876522111 11 245667777774321 11345555554322111 12233455
Q ss_pred hHHHHHHHHHHHHHHcC--CCcEEEEEecCcc-------------CcchHHHHHHHHHHhCCC----CceEEEEEcCceE
Q psy616 154 YFNSWVAFERSLHIIMP--ETQISIVFAEKIT-------------NFNIKNWINILFKELQEP----KLFSIMYYGNDLI 214 (1152)
Q Consensus 154 ~~~~~~g~~r~~~~e~p--~~~~~~vd~~~~~-------------~~~~~~~~~~l~~el~~~----~~~~va~r~~~~~ 214 (1152)
.-+++.+|.|+++.|+. ++++.+|.--... ...+++++..+ .-|..+ .-..+...+| .
T Consensus 166 sKaal~~lt~~la~El~~~gIrVn~v~Pg~~T~m~~~~~~~~~~~~~~pe~vA~~v-~~L~s~~~~itG~~~~vdgG--~ 242 (604)
T 2et6_A 166 AKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESIMPPPMLEKLGPEKVAPLV-LYLSSAENELTGQFFEVAAG--F 242 (604)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCHHHHTTSCHHHHTTCSHHHHHHHH-HHHTSSSCCCCSCEEEEETT--E
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEccCCcCccccccCChhhhccCCHHHHHHHH-HHHhCCcccCCCCEEEECCC--e
Confidence 55778999999999986 4555555421000 01122333322 222221 1123444444 2
Q ss_pred EEEeEeEec--------c---c-------------cc----------ccC-------------------------ccccC
Q psy616 215 RYQLNIKSI--------I---L-------------KD----------FKN-------------------------SYIKQ 235 (1152)
Q Consensus 215 r~~~~~~~~--------~---~-------------~~----------~~~-------------------------~~~~~ 235 (1152)
....++... . + .. .+. .. -.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~P~~~~d~~~l~~ka~~~~~~~~~~~~~~~-l~ 321 (604)
T 2et6_A 243 YAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDYDDSRKPEYLKNQYPFMLNDYATLTNEARKLPANDASGAPTVS-LK 321 (604)
T ss_dssp EEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCCCCTTSCGGGSCBCCSSSCCHHHHHHHHTTSCCCCCTTCCCCC-CT
T ss_pred EEEEEEEeccceecCCCCCCCHHHHHHHHHHhhchhhccccccccccCcchHHHHHHHHHHHHhCCccccccccccc-cC
Confidence 111111100 0 0 00 000 01 14
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++++|||||++|||+++|+.|+++|++ |++.+|.. .++..+++++.|.++..+.+|++ .+.+++++++.++||+||
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~-Vv~~~~~~-~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~iD 397 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAK-VVVNDFKD-ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTID 397 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCE-EEEECSSC-CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSCCC
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCE-EEEEeCcc-HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCCCC
Confidence 789999999999999999999999985 44555533 35667778777888888889984 456788999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
+||||||+.. ..++.+++.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..|.+++++|+++|++
T Consensus 398 iLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~---~~G~IVnisS~ag~~~~~~~~~Y~asKaa 473 (604)
T 2et6_A 398 ILVNNAGILR-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK---QFGRIINITSTSGIYGNFGQANYSSSKAG 473 (604)
T ss_dssp EEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCCEEEEECChhhccCCCCChhHHHHHHH
Confidence 9999999987 7889999999999999999999999999999998753 34789999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc---eeeeee
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK---IQYLVL 472 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~---~~~~v~ 472 (1152)
+.+|++.++.+.. ..++++.+|++|. .+.|...... ......++|++....+..++.... .+++.+
T Consensus 474 l~~lt~~la~El~--~~gIrVn~v~PG~--~T~m~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~v 542 (604)
T 2et6_A 474 ILGLSKTMAIEGA--KNNIKVNIVAPHA--ETAMTLSIMR-------EQDKNLYHADQVAPLLVYLGTDDVPVTGETFEI 542 (604)
T ss_dssp HHHHHHHHHHHHG--GGTEEEEEEEECC--CCCC----------------CCSSCGGGTHHHHHHTTSTTCCCCSCEEEE
T ss_pred HHHHHHHHHHHhC--ccCeEEEEEcCCC--CCccccccCc-------hhhccCCCHHHHHHHHHHHhCCccCCCCcEEEE
Confidence 9999999998764 4567888999883 5666432100 011235689999998887664322 245555
Q ss_pred chhh
Q psy616 473 SGEL 476 (1152)
Q Consensus 473 ~~~~ 476 (1152)
++.+
T Consensus 543 dGG~ 546 (604)
T 2et6_A 543 GGGW 546 (604)
T ss_dssp ETTE
T ss_pred CCCe
Confidence 5543
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-26 Score=244.83 Aligned_cols=222 Identities=13% Similarity=0.089 Sum_probs=171.3
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
-++|++|||||++|||+++|+.|+++|+++++ ++|+. ..+ +..+.++..++||++|+++++++++ +||
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~-~~~~~~~~~------~~~~~~~~~~~~Dv~~~~~v~~~~~----~~g 77 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVA-LGLDADGVH------APRHPRIRREELDITDSQRLQRLFE----ALP 77 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EESSTTSTT------SCCCTTEEEEECCTTCHHHHHHHHH----HCS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EeCCHHHHh------hhhcCCeEEEEecCCCHHHHHHHHH----hcC
Confidence 36999999999999999999999999996554 55543 221 1345689999999999999887764 589
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||++|||||+.. ++.+++.++|++++++|+.|++++.|++.|+|++. .+.||++||+++..|.++++.|+++
T Consensus 78 ~iDiLVNNAGi~~---~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~----~G~IVnisS~~~~~~~~~~~~Y~as 150 (242)
T 4b79_A 78 RLDVLVNNAGISR---DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR----GGSILNIASMYSTFGSADRPAYSAS 150 (242)
T ss_dssp CCSEEEECCCCCC---GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----CEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred CCCEEEECCCCCC---CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc----CCeEEEEeeccccCCCCCCHHHHHH
Confidence 9999999999854 57789999999999999999999999999998652 3789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc--
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK-- 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~-- 466 (1152)
|+++.+|++.++.+.. ..++++.+|.+|... +.|...... ..+...+...+ +.-+|+|...++..+++...
T Consensus 151 Kaav~~ltr~lA~Ela--~~gIrVNaV~PG~i~-T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~ 227 (242)
T 4b79_A 151 KGAIVQLTRSLACEYA--AERIRVNAIAPGWID-TPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASF 227 (242)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEEeCCCC-ChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 9999999999988765 456788889888764 445432221 12222333333 24579999998887765432
Q ss_pred --eeeeeechhh
Q psy616 467 --IQYLVLSGEL 476 (1152)
Q Consensus 467 --~~~~v~~~~~ 476 (1152)
.+.+.++|-|
T Consensus 228 iTG~~l~VDGG~ 239 (242)
T 4b79_A 228 VTGAVLAVDGGY 239 (242)
T ss_dssp CCSCEEEESTTG
T ss_pred ccCceEEECccH
Confidence 3556666654
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=248.22 Aligned_cols=224 Identities=12% Similarity=0.078 Sum_probs=176.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++..+.++.+++||++|+++++++++++.++ |+
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFT-VFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-AP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCE-EEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CC
Confidence 5789999999999999999999999985 5555665 5567788888888899999999999999999999999998 99
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++.. .+.||++||+++..+.++++.|+++|
T Consensus 84 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK 159 (252)
T 3h7a_A 84 LEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG---QGKIFFTGATASLRGGSGFAAFASAK 159 (252)
T ss_dssp EEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred ceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEECCHHHcCCCCCCccHHHHH
Confidence 999999999987 78899999999999999999999999999999987643 46799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceE-EEEeCCcccCccccccccccc-hhHHhhcCCCCCCHHHHHHHHHHHHhcCce
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKL-ITINWPLWNNSKFKIGNNEQT-DFYFKSSKQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~-~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
+++++|++.++.+.. ..++++ .+|.+|... +.|........ ............+|+|..+.+..++..+..
T Consensus 160 aa~~~l~~~la~e~~--~~gi~v~n~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 160 FGLRAVAQSMARELM--PKNIHVAHLIIDSGVD-TAWVRERREQMFGKDALANPDLLMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEEC----------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHHhh--hcCCEEEEEecCCccC-ChhhhccchhhhhhhhhcCCccCCCHHHHHHHHHHHHhCchh
Confidence 999999999987754 335678 788887664 44433221111 111112223368999999999998876543
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=250.00 Aligned_cols=222 Identities=14% Similarity=0.126 Sum_probs=178.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++..+.++.++.||++|+++++++++++.+++|+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAK-ILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999985 5555665 4556677788888889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.++++.|+++|
T Consensus 82 iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~g~IV~isS~~~~~~~~~~~~Y~asK 157 (264)
T 3tfo_A 82 IDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ---RSGQIINIGSIGALSVVPTAAVYCATK 157 (264)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCeEEEEEcCHHHcccCCCChhHHHHH
Confidence 999999999987 7889999999999999999999999999999998754 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++.+|++.++.+. . ++++.+|.+|... +.|........ ..........+++|+|..+.+..++..+.
T Consensus 158 aal~~l~~~la~e~---~-gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~ 226 (264)
T 3tfo_A 158 FAVRAISDGLRQES---T-NIRVTCVNPGVVE-SELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQ 226 (264)
T ss_dssp HHHHHHHHHHHHHC---S-SEEEEEEEECCC------------------------CCCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHhC---C-CCEEEEEecCCCc-CcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCc
Confidence 99999999998873 1 6688889887664 44432211110 00111111225799999999999998764
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=271.50 Aligned_cols=267 Identities=16% Similarity=0.155 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCccccccc
Q psy616 718 RQRHLLQESWLALED-AGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTA 794 (1152)
Q Consensus 718 q~rl~L~~a~~Aled-AG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdta 794 (1152)
.+.|+++++++||+| ||+++++++ +|++|+...+.. ....++.++++.+|+ ++|+++|+++
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId----~vi~g~~~~~~~------------~~~~~a~~va~~lGlp~~~pa~~v~~~ 95 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLIS----DMILGVVSPVGD------------QGGDIARTAVLAAGLPETTGGVQLNRF 95 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEE----EEEEECC--------------------CHHHHHHHHTTCCTTCEEEEEC--
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCC----EEEEEecCcccc------------ccCcHHHHHHHHcCCCCCCceEEecCc
Confidence 467999999999999 999998887 788886543211 012468899999999 7899999999
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHH--------------------HHHHH-------------------
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEA--------------------YIAMT------------------- 835 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~--------------------~~~~~------------------- 835 (1152)
|+|++.||+.|+++|++|+||.+||+|++.+..... .+++.
T Consensus 96 Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~i~re~~d~~a 175 (407)
T 3svk_A 96 CASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEGFSREDVDAYA 175 (407)
T ss_dssp -CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhCcCHHHHHHHH
Confidence 999999999999999999999999999997654110 00000
Q ss_pred -----------hcC----------------CCCCCCCccc-------------CCC------------------------
Q psy616 836 -----------SAG----------------MLSPDGKCYV-------------FDE------------------------ 851 (1152)
Q Consensus 836 -----------~~g----------------~ls~~g~~~~-------------Fd~------------------------ 851 (1152)
+.| .+.||..+|+ |+.
T Consensus 176 ~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~~i~~~ 255 (407)
T 3svk_A 176 LRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHV 255 (407)
T ss_dssp HHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCSSCCCC
T ss_pred HHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCcccccccccccccccccccccc
Confidence 001 3667887775 663
Q ss_pred --CCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy616 852 --RANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIIT 929 (1152)
Q Consensus 852 --~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~ 929 (1152)
..|...++||++++||+++++|.++|++++++|+|++.++++.....+ +...+++++|++||++|+||||||+
T Consensus 256 ~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~-----~~~~a~~~al~~Agl~~~dId~~e~ 330 (407)
T 3svk_A 256 HTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLT-----GPTPATRKVLDRAGLTIDDIDLFEL 330 (407)
T ss_dssp CBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCC-----THHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred ccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccH-----HHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 257777999999999999999999999999999999998876543333 3368899999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCC
Q psy616 930 HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 1009 (1152)
Q Consensus 930 hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~ 1009 (1152)
|.+.|. .|+..+ +.|+-.. .++.+.+.|..+||+.+|+|+..+++++++|+++
T Consensus 331 hdaf~~----~~l~~~-~~lg~~~---~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~------------------- 383 (407)
T 3svk_A 331 NEAFAS----VVLKFQ-KDLNIPD---EKLNVNGGAIAMGHPLGATGAMITGTMVDELERR------------------- 383 (407)
T ss_dssp CCSBHH----HHHHHH-HHHTCCG---GGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH-------------------
T ss_pred eChhHH----HHHHHH-HHhCCCC---CCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc-------------------
Confidence 988875 454443 4454322 2456777777799999999999999999999872
Q ss_pred CCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1010 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1010 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
..|+++++..+-||....+|||.
T Consensus 384 -----------------~~~~gl~~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 384 -----------------NARRALITLCIGGGMGVATIIER 406 (407)
T ss_dssp -----------------TCCEEEEEEECSSSCEEEEEEEE
T ss_pred -----------------CCCEEEEEeeccCcceEEEEEEc
Confidence 13677888888899999999984
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-25 Score=245.62 Aligned_cols=235 Identities=18% Similarity=0.137 Sum_probs=187.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCC-CcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFN-NKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g-~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||++|||+++|+.|+++|+ +|++++|+ +..++..++++..+ .++.++++|++|+++++++++++.+++|
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 589999999999999999999999998 55556666 44566677777766 6899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-cCCCCChhhhH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAM 391 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-~g~~g~~~Yaa 391 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++. .+.+++..|++
T Consensus 88 ~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~~Y~a 163 (262)
T 3pk0_A 88 GIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS---GSGRVVLTSSITGPITGYPGWSHYGA 163 (262)
T ss_dssp CCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---SSCEEEEECCSBTTTBCCTTCHHHHH
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEechhhccCCCCCChhhHH
Confidence 9999999999987 7889999999999999999999999999999998764 34679999999996 78899999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc----
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK---- 466 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~---- 466 (1152)
+|+++++|++.++.+.. ..++++.+|.+|.....++............+...+ +..+|+|..+++..++....
T Consensus 164 sK~a~~~l~~~la~e~~--~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~it 241 (262)
T 3pk0_A 164 TKAAQLGFMRTAAIELA--PHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYIT 241 (262)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHH--hhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCc
Confidence 99999999999988743 345688899988775443322111111111222222 34689999999988876432
Q ss_pred eeeeeechhh
Q psy616 467 IQYLVLSGEL 476 (1152)
Q Consensus 467 ~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 242 G~~i~vdGG~ 251 (262)
T 3pk0_A 242 GQAIAVDGGQ 251 (262)
T ss_dssp SCEEEESTTT
T ss_pred CCEEEECCCe
Confidence 3556666554
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.5e-25 Score=240.04 Aligned_cols=223 Identities=15% Similarity=0.190 Sum_probs=180.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|++|+++|++ |++++|+ +..++..++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAA-VAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999985 5555665 4445566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++. . ++||++||+++..+.+++..|+++|
T Consensus 85 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~-g~iv~isS~~~~~~~~~~~~Y~asK 159 (247)
T 2jah_A 85 LDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS---K-GTVVQMSSIAGRVNVRNAAVYQATK 159 (247)
T ss_dssp CSEEEECCCCCC-CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---T-CEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC---C-CEEEEEccHHhcCCCCCCcHHHHHH
Confidence 999999999987 6788899999999999999999999999999998653 2 7899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-cchhHHhhc--CCCCCCHHHHHHHHHHHHhcCc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QTDFYFKSS--KQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~~~~~~~~--g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++.+|++.++.+.. ..++++.+|.+|... +.|...... ......... .+...+|+|..+.+..++..+.
T Consensus 160 ~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 160 FGVNAFSETLRQEVT--ERGVRVVVIEPGTTD-TELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECSBS-SSGGGGCCCHHHHHHHHHHTTTSCCBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHhc--ccCcEEEEEECCCCC-CcchhcccchhhHHHHHhcccccCCCCHHHHHHHHHHHhCCCc
Confidence 999999999887643 345688899888764 445322111 111111111 1123799999999999887653
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-25 Score=246.11 Aligned_cols=235 Identities=13% Similarity=0.079 Sum_probs=185.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC--------------cchHHHHHHHHhCCCcEEEEEecCCCHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--------------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKM 300 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~--------------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v 300 (1152)
.++++|||||++|||+++|+.|+++|++++ +++|+ +..++..+.++..+.++.++.+|++|++++
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADII-AVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEE-EEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 579999999999999999999999998554 44442 223445566677788999999999999999
Q ss_pred HHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc
Q psy616 301 ISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI 380 (1152)
Q Consensus 301 ~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~ 380 (1152)
+++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++.. ..++||++||+++.
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~~g~iv~isS~~~~ 165 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGG--RGGSIILISSAAGM 165 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--SCEEEEEECCGGGT
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC--CCCEEEEEccHhhC
Confidence 9999999999999999999999987 77889999999999999999999999999999987542 24689999999999
Q ss_pred cCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhhcCCCC
Q psy616 381 LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQKV 448 (1152)
Q Consensus 381 ~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~~~ 448 (1152)
.+.+++..|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|.... .............+.
T Consensus 166 ~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~ 242 (277)
T 3tsc_A 166 KMQPFMIHYTASKHAVTGLARAFAAELG--KHSIRVNSVHPGPVN-TPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWV 242 (277)
T ss_dssp SCCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBS-SGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSC
T ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHhC--ccCeEEEEEEeCCCc-CCcccchhhhhhhhcccccHHHHHHhhhccCCCC
Confidence 9999999999999999999999988753 345688899988774 4443210 000000011111245
Q ss_pred CCHHHHHHHHHHHHhcCc----eeeeeechhh
Q psy616 449 LHENDGLKLFEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 449 l~~~e~~~~l~~~l~~~~----~~~~v~~~~~ 476 (1152)
.+|+|..+++..++.... .+.+.+++.+
T Consensus 243 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 243 AEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 789999999998886442 3555555543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-25 Score=242.85 Aligned_cols=224 Identities=13% Similarity=0.143 Sum_probs=183.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|++++++..++ +..++..++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999776666655 4456667778888889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.+++..|+++|
T Consensus 83 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK 158 (246)
T 3osu_A 83 LDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ---RSGAIINLSSVVGAVGNPGQANYVATK 158 (246)
T ss_dssp CCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCCEEEEEcchhhcCCCCCChHHHHHH
Confidence 999999999987 7788999999999999999999999999999998754 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|........ ........+ +...++|..+++..++...
T Consensus 159 ~a~~~~~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~ 229 (246)
T 3osu_A 159 AGVIGLTKSAARELA--SRGITVNAVAPGFIV-SDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDK 229 (246)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBG-GGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEEECCCc-CCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999887643 335688899888765 44433221111 111112222 2457899999988877543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-25 Score=242.42 Aligned_cols=236 Identities=13% Similarity=0.064 Sum_probs=191.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++++++.+|+. ..++..++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999997777667774 445667778888889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..++||++||+++..+.++++.|+++|
T Consensus 83 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 158 (258)
T 3oid_A 83 LDVFVNNAASGV-LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN---GGGHIVSISSLGSIRYLENYTTVGVSK 158 (258)
T ss_dssp CCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT---TCEEEEEEEEGGGTSBCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEECchhhCCCCCCcHHHHHHH
Confidence 999999999877 7789999999999999999999999999999998643 357899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhcC-CCCCCHHHHHHHHHHHHhcCc---
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSK-QKVLHENDGLKLFEQLLIQDK--- 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~~--- 466 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|....... ......... -+..+++|..+++..++....
T Consensus 159 aa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~i 235 (258)
T 3oid_A 159 AALEALTRYLAVELS--PKQIIVNAVSGGAID-TDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMI 235 (258)
T ss_dssp HHHHHHHHHHHHHTG--GGTEEEEEEEECCBC-SGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTC
T ss_pred HHHHHHHHHHHHHHh--hcCcEEEEEeeCCCc-ChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCc
Confidence 999999999988743 345688899888765 4443322111 111122222 235789999999998876532
Q ss_pred -eeeeeechhhh
Q psy616 467 -IQYLVLSGELE 477 (1152)
Q Consensus 467 -~~~~v~~~~~~ 477 (1152)
.+.+.+++.+.
T Consensus 236 tG~~i~vdGG~~ 247 (258)
T 3oid_A 236 RGQTIIVDGGRS 247 (258)
T ss_dssp CSCEEEESTTGG
T ss_pred cCCEEEECCCcc
Confidence 36666666543
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-25 Score=245.86 Aligned_cols=235 Identities=14% Similarity=0.086 Sum_probs=186.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecC-------------C-cchHHHHHHHHhCCCcEEEEEecCCCHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR-------------S-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKM 300 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R-------------~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v 300 (1152)
+++++|||||++|||+++|+.|+++|+++++ ++| + +..++..++++..+.++.++++|++|++++
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIA-CDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 5899999999999999999999999985544 444 2 223455666777788999999999999999
Q ss_pred HHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc
Q psy616 301 ISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI 380 (1152)
Q Consensus 301 ~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~ 380 (1152)
+++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++.. ..+.||++||+++.
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~ 169 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAG--NGGSIVVVSSSAGL 169 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--SCEEEEEECCGGGT
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CCCEEEEEcchhhc
Confidence 9999999999999999999999987 78899999999999999999999999999999987642 24679999999999
Q ss_pred cCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--------ccchh---HHhhcCCCCC
Q psy616 381 LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--------EQTDF---YFKSSKQKVL 449 (1152)
Q Consensus 381 ~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--------~~~~~---~~~~~g~~~l 449 (1152)
.+.++++.|+++|+++++|++.++.+.. ..++++.+|.+|.+.. .|..... ..... .......+..
T Consensus 170 ~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v~PG~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 246 (280)
T 3pgx_A 170 KATPGNGHYSASKHGLTALTNTLAIELG--EYGIRVNSIHPYSVET-PMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFM 246 (280)
T ss_dssp SCCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBCS-TTCCHHHHHHHHHHCGGGGGGSCCBTTBCSSCB
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHhh--hcCeEEEEEeeCcccC-cccchhhhhhhhhcCchhhhhhhhcccCCCCCC
Confidence 9999999999999999999999987643 3456888999887754 3432100 00000 0011122457
Q ss_pred CHHHHHHHHHHHHhcCc----eeeeeechhh
Q psy616 450 HENDGLKLFEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 450 ~~~e~~~~l~~~l~~~~----~~~~v~~~~~ 476 (1152)
+++|..+++..++.... .+.+.+++.+
T Consensus 247 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 247 TADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp CHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 89999999988876432 3555555543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=243.64 Aligned_cols=232 Identities=13% Similarity=0.096 Sum_probs=185.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999986 5555555 4556677788888899999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++ +.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.++++.|+++|
T Consensus 90 id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 164 (256)
T 3gaf_A 90 ITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA---GGGAILNISSMAGENTNVRMASYGSSK 164 (256)
T ss_dssp CCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEEcCHHHcCCCCCchHHHHHH
Confidence 999999999987 6667 89999999999999999999999999998653 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--cccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc----
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK---- 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~---- 466 (1152)
+++++|++.++.+.. ..++++.+|.+|.... .|.... ............+ +..+|+|..+++..++....
T Consensus 165 aa~~~~~~~la~e~~--~~gi~vn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~it 241 (256)
T 3gaf_A 165 AAVNHLTRNIAFDVG--PMGIRVNAIAPGAIKT-DALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWIS 241 (256)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBCC-HHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHh--hhCcEEEEEEEccccC-chhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCcc
Confidence 999999999987743 3456888999887754 332111 1111111122222 34689999999988875432
Q ss_pred eeeeeechh
Q psy616 467 IQYLVLSGE 475 (1152)
Q Consensus 467 ~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 242 G~~i~vdgG 250 (256)
T 3gaf_A 242 GQVLTVSGG 250 (256)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 355555544
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.8e-25 Score=243.19 Aligned_cols=237 Identities=15% Similarity=0.116 Sum_probs=187.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|++|+++|++ |++++|+ +..++..++++..+.++.+++||++|+++++++++++.+++|+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGAR-VVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999985 5556666 4456667777777889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|.+. ...+.||++||+++..+.+++..|+++|
T Consensus 84 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asK 160 (257)
T 3imf_A 84 IDILINNAAGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEK--GIKGNIINMVATYAWDAGPGVIHSAAAK 160 (257)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh--CCCcEEEEECchhhccCCCCcHHHHHHH
Confidence 999999999887 7889999999999999999999999999999998543 2356899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc---ccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc---
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK--- 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~--- 466 (1152)
+++++|++.++.+.. ...++++.+|.+|.+...++... .........+...+ +..+|+|..+++..++....
T Consensus 161 aa~~~l~~~la~e~~-~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i 239 (257)
T 3imf_A 161 AGVLAMTKTLAVEWG-RKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYI 239 (257)
T ss_dssp HHHHHHHHHHHHHHH-HHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhc-cccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence 999999998886531 01256889999988765443211 01111112222222 34689999999998876442
Q ss_pred -eeeeeechhh
Q psy616 467 -IQYLVLSGEL 476 (1152)
Q Consensus 467 -~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 240 tG~~i~vdGG~ 250 (257)
T 3imf_A 240 NGTCMTMDGGQ 250 (257)
T ss_dssp CSCEEEESTTT
T ss_pred cCCEEEECCCc
Confidence 3555555543
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-25 Score=246.83 Aligned_cols=238 Identities=16% Similarity=0.183 Sum_probs=176.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|++++++..|+ +..++..++++..+.++.+++||++|+++++++++++.+++|+
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 107 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR 107 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999665555444 3345666778788889999999999999999999999999999
Q ss_pred eeEEEEcccc--cCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 314 IDGVLHIAGI--SGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 314 idgvIh~AG~--~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
||+||||||+ .. ..++.+.+.++|++++++|+.|++++.++++|.|++......+.||++||+++..+.+++..|++
T Consensus 108 iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a 186 (280)
T 4da9_A 108 IDCLVNNAGIASIV-RDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCM 186 (280)
T ss_dssp CCEEEEECC-------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHH
T ss_pred CCEEEECCCccccC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHH
Confidence 9999999998 34 56889999999999999999999999999999998755444678999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhh--cC-CCCCCHHHHHHHHHHHHhcCc--
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS--SK-QKVLHENDGLKLFEQLLIQDK-- 466 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~--~g-~~~l~~~e~~~~l~~~l~~~~-- 466 (1152)
+|+++.+|++.++.+.. ..++++.+|.+|.+. +.|.............. .. -+..+|+|..+++..++....
T Consensus 187 sKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~ 263 (280)
T 4da9_A 187 SKAGLAAFSQGLALRLA--ETGIAVFEVRPGIIR-SDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGF 263 (280)
T ss_dssp HHHHHHHHHHHHHHHHT--TTTEEEEEEEECCBC-C----------------------CCBCHHHHHHHHHHHHTSTTGG
T ss_pred HHHHHHHHHHHHHHHHH--HhCcEEEEEeecCCc-CCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccC
Confidence 99999999999987743 346788999988775 44432211111111110 11 124589999999998876543
Q ss_pred --eeeeeechhh
Q psy616 467 --IQYLVLSGEL 476 (1152)
Q Consensus 467 --~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 264 itG~~i~vdGG~ 275 (280)
T 4da9_A 264 ATGSVIQADGGL 275 (280)
T ss_dssp GTTCEEEESTTC
T ss_pred CCCCEEEECCCc
Confidence 3556555543
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.4e-25 Score=242.04 Aligned_cols=226 Identities=12% Similarity=0.109 Sum_probs=183.0
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
...+++++|||||++|||+++|++|+++|++++++.+|+ +..++..++++..+.++.++.+|++|.++++++++++.++
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 445789999999999999999999999998766666454 4456667777788889999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
+|+||+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|+|++. ..++||++||.++..+.++++.|+
T Consensus 89 ~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~ 164 (256)
T 3ezl_A 89 VGEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER---GWGRIINISSVNGQKGQFGQTNYS 164 (256)
T ss_dssp TCCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCCCGGGSCSCCHHHH
T ss_pred cCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCEEEEEcchhhccCCCCCcccH
Confidence 999999999999987 7788999999999999999999999999999998764 346799999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
++|+++++|++.++.+.. ..++++.+|.+|.+. +.|....... .........+ +..+++|..+++..++..
T Consensus 165 asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 237 (256)
T 3ezl_A 165 TAKAGIHGFTMSLAQEVA--TKGVTVNTVSPGYIG-TDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASE 237 (256)
T ss_dssp HHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHH--HhCCEEEEEEECccc-CccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence 999999999999887643 345688899988775 4443322111 1112222222 346899999998887754
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-24 Score=245.97 Aligned_cols=246 Identities=14% Similarity=0.159 Sum_probs=189.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCC--cEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNN--KAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~--~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+ +..++..++++..+. ++.++.+|++|+++++++++.+.+.+
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~-Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCK-VAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 4789999999999999999999999985 6666666 445666677766655 89999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHh---cCCCCCEEEEecCCccccCCCCChh
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKL---QKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~---~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|.+. .....+.||++||+++..+.++++.
T Consensus 86 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~ 164 (319)
T 3ioy_A 86 GPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGI 164 (319)
T ss_dssp CCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHH
T ss_pred CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHH
Confidence 99999999999987 7889999999999999999999999999999998764 2234678999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchh--------------HHhhcCCCCCCHHHH
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF--------------YFKSSKQKVLHENDG 454 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~--------------~~~~~g~~~l~~~e~ 454 (1152)
|+++|+++.+|++.++.+.. ..++++.+|++|.+. +.|.......... .+.......++++++
T Consensus 165 Y~aSKaal~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~v 241 (319)
T 3ioy_A 165 YNTTKFAVRGLSESLHYSLL--KYEIGVSVLCPGLVK-SYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVI 241 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTCEEEEECCCCBC------------------------------CCGGGSSBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh--hcCCEEEEEEcCeEc-cCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHH
Confidence 99999999999998877643 335789999998875 4443221110000 000001112799999
Q ss_pred HHHHHHHHhcCceeeeeechhhhHHHHHHhh
Q psy616 455 LKLFEQLLIQDKIQYLVLSGELEKLNQIINN 485 (1152)
Q Consensus 455 ~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~ 485 (1152)
.+.+..++..+...++.....+..+...+..
T Consensus 242 A~~~~~al~~~~~~i~~~~~~~~~~~~~~~~ 272 (319)
T 3ioy_A 242 GARVIEAMKANRLHIFSHPDHKEELREVFDE 272 (319)
T ss_dssp HHHHHHHHHTTCSEECCCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEcCHHHHHHHHHHHHH
Confidence 9999999988775554443334444444433
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-25 Score=244.38 Aligned_cols=232 Identities=14% Similarity=0.139 Sum_probs=188.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|++++++..++ +..++..++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 106 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR 106 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 589999999999999999999999999766666545 3345666777788889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..++||++||+++..+.+++..|+++|
T Consensus 107 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 182 (269)
T 4dmm_A 107 LDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ---RSGRIINIASVVGEMGNPGQANYSAAK 182 (269)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEECchhhcCCCCCchhHHHHH
Confidence 999999999987 7788999999999999999999999999999998754 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc-----e
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK-----I 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~-----~ 467 (1152)
+++++|++.++.+.. ..++++.+|.+|.+. +.|...... ........+ +..+++|..+++..++..+. .
T Consensus 183 ~a~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~--~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG 257 (269)
T 4dmm_A 183 AGVIGLTKTVAKELA--SRGITVNAVAPGFIA-TDMTSELAA--EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITG 257 (269)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECCBT-TSCSCHHHH--HHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCS
T ss_pred HHHHHHHHHHHHHHh--hhCcEEEEEEECCCc-CcccccccH--HHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcC
Confidence 999999999887643 335688999988765 445332111 111222222 35689999999998887532 3
Q ss_pred eeeeechh
Q psy616 468 QYLVLSGE 475 (1152)
Q Consensus 468 ~~~v~~~~ 475 (1152)
+.+.+++.
T Consensus 258 ~~i~vdGG 265 (269)
T 4dmm_A 258 QVINIDGG 265 (269)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 45555543
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=247.57 Aligned_cols=233 Identities=12% Similarity=0.111 Sum_probs=186.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++..+.++.++.+|++|.++++++++++.+++|+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAM-VIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999984 5555665 4456666777777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.++++.|+++|
T Consensus 106 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (270)
T 3ftp_A 106 LNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA---RGGRIVNITSVVGSAGNPGQVNYAAAK 181 (270)
T ss_dssp CCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCCEEEEECchhhCCCCCCchhHHHHH
Confidence 999999999987 7788999999999999999999999999999998754 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchh-HHhhcCC-CCCCHHHHHHHHHHHHhcCc----e
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF-YFKSSKQ-KVLHENDGLKLFEQLLIQDK----I 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~-~~~~~g~-~~l~~~e~~~~l~~~l~~~~----~ 467 (1152)
+++++|++.++.+.. ..++++.+|.+|.+. +.|.......... ......+ +..+|+|..+++..++.... .
T Consensus 182 aa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG 258 (270)
T 3ftp_A 182 AGVAGMTRALAREIG--SRGITVNCVAPGFID-TDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITG 258 (270)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHh--hhCeEEEEEEeCCCc-CcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccC
Confidence 999999999887743 335688899888664 4443222111111 1111111 34589999999988875432 3
Q ss_pred eeeeechh
Q psy616 468 QYLVLSGE 475 (1152)
Q Consensus 468 ~~~v~~~~ 475 (1152)
+.+.+++.
T Consensus 259 ~~i~vdGG 266 (270)
T 3ftp_A 259 TTLHVNGG 266 (270)
T ss_dssp CEEEESTT
T ss_pred cEEEECCC
Confidence 55555543
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.7e-25 Score=246.74 Aligned_cols=235 Identities=18% Similarity=0.106 Sum_probs=186.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCC-CcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFN-NKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g-~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++..+ .++.+++||++|+++++++++++.+++|
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGAN-VAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999985 4555555 55677778887776 6899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-cCCCCChhhhH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAM 391 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-~g~~g~~~Yaa 391 (1152)
+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..++||++||+++. .+.+++..|++
T Consensus 119 ~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~g~iV~isS~~~~~~~~~~~~~Y~a 194 (293)
T 3rih_A 119 ALDVVCANAGIFP-EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS---GRGRVILTSSITGPVTGYPGWSHYGA 194 (293)
T ss_dssp CCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH---SSCEEEEECCSBTTTBBCTTCHHHHH
T ss_pred CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCCEEEEEeChhhccCCCCCCHHHHH
Confidence 9999999999987 7889999999999999999999999999999998764 34679999999996 88899999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc----
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK---- 466 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~---- 466 (1152)
+|+++++|++.++.+.. ..++++.+|.+|.+...++............+...+ +..+++|..+++..++....
T Consensus 195 sKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~it 272 (293)
T 3rih_A 195 SKAAQLGFMRTAAIELA--PRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYIT 272 (293)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHh--hhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCC
Confidence 99999999999887743 335688999988776433211111111111222222 23589999999988775432
Q ss_pred eeeeeechhh
Q psy616 467 IQYLVLSGEL 476 (1152)
Q Consensus 467 ~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 273 G~~i~vdGG~ 282 (293)
T 3rih_A 273 GQAIVVDGGQ 282 (293)
T ss_dssp SCEEEESTTT
T ss_pred CCEEEECCCc
Confidence 3556666543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-24 Score=244.66 Aligned_cols=235 Identities=16% Similarity=0.111 Sum_probs=186.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVT-VGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999985 5555665 4456677778778889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc--CCCCChhhhH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL--GDFGSCDYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~--g~~g~~~Yaa 391 (1152)
||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++.. +.+++..|++
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~g~Iv~isS~~~~~~~~~~~~~~Y~a 182 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR---GGGAIVVVSSINGTRTFTTPGATAYTA 182 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCSBTTTBCCSTTCHHHHH
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCceEEEEcChhhccCCCCCCchHHHH
Confidence 99999999987534788999999999999999999999999999998764 346799999999987 8899999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhH----Hh-hcC------CCCCCHHHHHHHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFY----FK-SSK------QKVLHENDGLKLFEQ 460 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~----~~-~~g------~~~l~~~e~~~~l~~ 460 (1152)
+|+++++|++.++.+.. ..++++.+|.+|... +.|........... .+ ... -+..+|+|..+++..
T Consensus 183 sKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~f 259 (283)
T 3v8b_A 183 TKAAQVAIVQQLALELG--KHHIRVNAVCPGAIE-TNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRF 259 (283)
T ss_dssp HHHHHHHHHHHHHHHTT--TTTEEEEEEEECSBS-SCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC--ccCcEEEEEEeCCCc-CCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHH
Confidence 99999999999988754 346788899888764 44433211111000 00 001 123589999999988
Q ss_pred HHhcCc----eeeeeechhh
Q psy616 461 LLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 461 ~l~~~~----~~~~v~~~~~ 476 (1152)
++.... .+.+.+++.+
T Consensus 260 L~s~~a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 260 LVSERARHVTGSPVWIDGGQ 279 (283)
T ss_dssp HTSGGGTTCCSCEEEESTTH
T ss_pred HcCccccCCcCCEEEECcCc
Confidence 875432 3556666554
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-25 Score=245.99 Aligned_cols=236 Identities=13% Similarity=0.126 Sum_probs=183.5
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
....++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++..+.++.++.||++|+++++++++++.++
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3456899999999999999999999999985 5555665 4456677788888889999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHH--HHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALEN--TILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p--~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
+|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++| .|++. ..+.||++||+++..+.+++..
T Consensus 99 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~---~~g~iV~isS~~~~~~~~~~~~ 174 (279)
T 3sju_A 99 FGPIGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA---GWGRIVNIASTGGKQGVMYAAP 174 (279)
T ss_dssp HCSCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH---TCEEEEEECCGGGTSCCTTCHH
T ss_pred cCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc---CCcEEEEECChhhccCCCCChh
Confidence 999999999999987 78899999999999999999999999999999 45543 3468999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhhcCC-CCCCHHHHH
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQ-KVLHENDGL 455 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~-~~l~~~e~~ 455 (1152)
|+++|+++++|++.++.+.. ..++++.+|.+|... +.|.... ............+ +..+|+|..
T Consensus 175 Y~asKaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA 251 (279)
T 3sju_A 175 YTASKHGVVGFTKSVGFELA--KTGITVNAVCPGYVE-TPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVA 251 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEESSBC-SHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH--hhCcEEEEEeeCccc-chHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHH
Confidence 99999999999999988754 345688889887664 3342210 0011111111111 346899999
Q ss_pred HHHHHHHhcCc----eeeeeechh
Q psy616 456 KLFEQLLIQDK----IQYLVLSGE 475 (1152)
Q Consensus 456 ~~l~~~l~~~~----~~~~v~~~~ 475 (1152)
+++..++.... .+.+.+++.
T Consensus 252 ~~v~~L~s~~a~~itG~~i~vdGG 275 (279)
T 3sju_A 252 GLVGYLVTDAAASITAQALNVCGG 275 (279)
T ss_dssp HHHHHHTSSGGGGCCSCEEEESTT
T ss_pred HHHHHHhCccccCcCCcEEEECCC
Confidence 99888775432 345555543
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=241.81 Aligned_cols=232 Identities=14% Similarity=0.099 Sum_probs=185.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|++++++..|+ +..++..++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999766665665 3446667778888899999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-CCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-DFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g-~~g~~~Yaaa 392 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|+ +.+.||++||..+..+ .++++.|+++
T Consensus 110 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~-----~~g~iv~isS~~~~~~~~~~~~~Y~as 183 (271)
T 3v2g_A 110 LDILVNSAGIWH-SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG-----DGGRIITIGSNLAELVPWPGISLYSAS 183 (271)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC-----TTCEEEEECCGGGTCCCSTTCHHHHHH
T ss_pred CcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-----cCCEEEEEeChhhccCCCCCchHHHHH
Confidence 999999999987 78899999999999999999999999999999863 2468999999888776 6899999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc----e
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK----I 467 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~----~ 467 (1152)
|+++++|++.++.+.. ..++++.+|.+|.+. +.|............+...+ +..+|+|..+++..++.... .
T Consensus 184 Kaa~~~l~~~la~e~~--~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG 260 (271)
T 3v2g_A 184 KAALAGLTKGLARDLG--PRGITVNIVHPGSTD-TDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTG 260 (271)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBC-SSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHhh--hhCeEEEEEecCCCc-CCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCccC
Confidence 9999999999887753 335688899888775 44433222222222222222 34689999999888775432 3
Q ss_pred eeeeechh
Q psy616 468 QYLVLSGE 475 (1152)
Q Consensus 468 ~~~v~~~~ 475 (1152)
+.+.+++.
T Consensus 261 ~~i~vdGG 268 (271)
T 3v2g_A 261 ASLTIDGG 268 (271)
T ss_dssp CEEEESTT
T ss_pred CEEEeCcC
Confidence 55555543
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-25 Score=241.21 Aligned_cols=232 Identities=17% Similarity=0.128 Sum_probs=182.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+. ..++..++ .+.++.+++||++|+++++++++++.+++|+
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGAT-VIVSDINAEGAKAAAAS---IGKKARAIAADISDPGSVKALFAEIQALTGG 80 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHH---HCTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHH---hCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 5799999999999999999999999984 66666664 22333333 3778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++.. ..++||++||.++..+.++++.|+++|
T Consensus 81 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asK 157 (247)
T 3rwb_A 81 IDILVNNASIVP-FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAG--KAGRVISIASNTFFAGTPNMAAYVAAK 157 (247)
T ss_dssp CSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CCcEEEEECchhhccCCCCchhhHHHH
Confidence 999999999987 78899999999999999999999999999999987642 246899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhh-cC-CCCCCHHHHHHHHHHHHhcCc----e
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS-SK-QKVLHENDGLKLFEQLLIQDK----I 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~-~g-~~~l~~~e~~~~l~~~l~~~~----~ 467 (1152)
+++++|++.++.+.. ..++++.+|.+|.....++.............. .. -+..+|+|..+++..++.... .
T Consensus 158 aa~~~~~~~la~e~~--~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG 235 (247)
T 3rwb_A 158 GGVIGFTRALATELG--KYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITG 235 (247)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCC
Confidence 999999999987743 345788999988776433221111111111111 11 234689999999998876542 3
Q ss_pred eeeeechh
Q psy616 468 QYLVLSGE 475 (1152)
Q Consensus 468 ~~~v~~~~ 475 (1152)
+.+.+++.
T Consensus 236 ~~i~vdGG 243 (247)
T 3rwb_A 236 QTLNVDAG 243 (247)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 55555554
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.7e-25 Score=247.54 Aligned_cols=232 Identities=15% Similarity=0.164 Sum_probs=187.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+ +..++..++++..+.++.+++||++|.++++++++++.+++|+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGAR-LVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 5799999999999999999999999985 5566665 4456677778888889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++.. ..+.||++||+++..+.++++.|+++|
T Consensus 109 id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asK 185 (301)
T 3tjr_A 109 VDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQG--TGGHIAFTASFAGLVPNAGLGTYGVAK 185 (301)
T ss_dssp CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--SCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC--CCcEEEEeCchhhcCCCCCchHHHHHH
Confidence 999999999987 78899999999999999999999999999999987542 246899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch----------hHHh--hcCCCCCCHHHHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD----------FYFK--SSKQKVLHENDGLKLFEQL 461 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~----------~~~~--~~g~~~l~~~e~~~~l~~~ 461 (1152)
+++++|++.++.+.. ..++++.+|++|.+. +.|......... ..+. ......++++++++.+..+
T Consensus 186 aa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~ 262 (301)
T 3tjr_A 186 YGVVGLAETLAREVK--PNGIGVSVLCPMVVE-TKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADA 262 (301)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEECCSCCC-SSHHHHHHHHC----------------------CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc--ccCcEEEEEECCccc-cccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHH
Confidence 999999999887753 345688999988775 444321110000 0000 0112357999999999999
Q ss_pred HhcCceeeeeec
Q psy616 462 LIQDKIQYLVLS 473 (1152)
Q Consensus 462 l~~~~~~~~v~~ 473 (1152)
+..+...+++..
T Consensus 263 l~~~~~~i~~g~ 274 (301)
T 3tjr_A 263 ILANRLYILPHA 274 (301)
T ss_dssp HHHTCSEECCCT
T ss_pred HhcCCeEEecCH
Confidence 988765544333
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=247.44 Aligned_cols=226 Identities=15% Similarity=0.123 Sum_probs=184.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCC--cEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYS--TNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga--~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
.++++|||||++|||+++|+.|+++|+ .+|++++|+. ..+++.++++.. +.++.+++||++|+++++++++++.+
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999999987 3677777764 445666666654 67899999999999999999999999
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
++|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.++++.|
T Consensus 112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~g~IV~isS~~~~~~~~~~~~Y 188 (287)
T 3rku_A 112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK---NSGDIVNLGSIAGRDAYPTGSIY 188 (287)
T ss_dssp GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSCCTTCHHH
T ss_pred hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeEEEECChhhcCCCCCCchH
Confidence 999999999999986535678899999999999999999999999999998754 34679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--cccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++|+++++|++.++.+.. ..++++.+|.+|.+. +.|.... ..............+++|+|.++++..++..+.
T Consensus 189 ~asKaa~~~l~~~la~e~~--~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~ 264 (287)
T 3rku_A 189 CASKFAVGAFTDSLRKELI--NTKIRVILIAPGLVE-TEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQ 264 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTT--TSSCEEEEEEESCEE-SSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCCEEEEEeCCcCc-CccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCC
Confidence 9999999999999988754 446788999988775 3442110 000111111233457899999999999887654
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.93 E-value=8.7e-27 Score=265.55 Aligned_cols=244 Identities=18% Similarity=0.199 Sum_probs=187.7
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCccccccc
Q psy616 716 DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTA 794 (1152)
Q Consensus 716 dpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs~tvdta 794 (1152)
++..+++++++++||+|||+++++++ +|++|+..+++. . ..++++++..+|++ +|+++|+++
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~id----~vi~~~~~~~~~--------~-----~~~a~~v~~~lgl~~~~~~~v~~a 111 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQPEDID----MIIVATATGDMP--------F-----PTVANMLQERLGTGKVASMDQLAA 111 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCS--------S-----SCHHHHHHHHHTCCSCCEEEEECG
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC--------C-----CcHHHHHHHHhCCCCCcEEEECCc
Confidence 45789999999999999999988776 789997654321 1 12578999999998 699999999
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhh
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 874 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~ 874 (1152)
|+|++.||+.|++.|++|++|.+||+|++.+..+ .+|||. .+|+++|||++++||++.++
T Consensus 112 Cas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------------~~~~d~-~~~~~~gdGa~A~vl~~~~~-- 171 (313)
T 1zow_A 112 CSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI-----------------TDLTDR-STAVLFGDGAGAVIIGEVSE-- 171 (313)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT-----------------CCTTCH-HHHTTBCEEEEEEEEEECST--
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc-----------------cCcccc-cceeeeccceEEEEEEecCC--
Confidence 9999999999999999999999999999974221 135553 37999999999999998764
Q ss_pred cCCCceEEEEEEEEEecCCCCC-CCCCC--------CH--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy616 875 SDGDPIHAIIRGSGINYDGKTN-GITAP--------NG--------ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937 (1152)
Q Consensus 875 ~dgd~i~avI~g~a~~~dG~~~-~~~~P--------~~--------~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~g 937 (1152)
+++|++ +.+.++|... .+..| ++ ..+.++|+++|+++|++|+||+||++|++||+.+
T Consensus 172 --~~~i~~----~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~ 245 (313)
T 1zow_A 172 --GRGIIS----YEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIM 245 (313)
T ss_dssp --TCEEEE----EEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHH
T ss_pred --CCceeE----EEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH
Confidence 345654 3444455321 22222 23 3788999999999999999999999999999988
Q ss_pred CHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccc
Q psy616 938 DPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKS 1017 (1152)
Q Consensus 938 D~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~ 1017 (1152)
|.+ .+.|+-... .++ +.|+++||+.+|+++..|.+++ +.+.+.
T Consensus 246 d~~-----~~~lg~~~~---~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~~------------------------ 288 (313)
T 1zow_A 246 ESA-----RERLGISKD---KMS--VSVNKYGNTSAASIPLSIDQEL---KNGKLK------------------------ 288 (313)
T ss_dssp HHH-----HHHHTCCGG---GBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCCC------------------------
T ss_pred HHH-----HHHhCCCHH---HHH--HhHhhhCchHHHHHHHHHHHHH---HcCCCC------------------------
Confidence 864 455653221 122 4699999999999999987754 333211
Q ss_pred cccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1018 NKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1018 ~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+-.+.++.+||.|++.+.++|+
T Consensus 289 ---------~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 289 ---------DDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp ---------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------CCCEEEEEEEchhhhheEEEEE
Confidence 1145689999999999999986
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-25 Score=246.94 Aligned_cols=228 Identities=11% Similarity=0.037 Sum_probs=177.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCC-cEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNN-KAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~-~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+ +..++..+++...+. .+.+++||++|+++++++++++.+++|
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYS-VVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999985 5556665 444556666655443 458999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++.. ...+.||++||+++..+.+++..|+++
T Consensus 111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~~~g~IV~isS~~~~~~~~~~~~Y~as 189 (281)
T 4dry_A 111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQT-PRGGRIINNGSISAQTPRPNSAPYTAT 189 (281)
T ss_dssp CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS-SCCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCcEEEEECCHHhCCCCCCChhHHHH
Confidence 9999999999875346889999999999999999999999999999987532 124789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHH-hhcCCCCCCHHHHHHHHHHHHhcCce
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-KSSKQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~~~g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
|+++++|++.++.+.. ..++++.+|.+|.+. +.|............ .....+..+++|.++++..++..+..
T Consensus 190 Kaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 190 KHAITGLTKSTALDGR--MHDIACGQIDIGNAA-TDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEEECBC-C-------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEEECcCc-ChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence 9999999999887743 345688888887664 444332111100000 01112357899999999999887654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-24 Score=239.83 Aligned_cols=230 Identities=13% Similarity=0.202 Sum_probs=181.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|++ ..++..+++ +.++.++++|++|+++++++++++.+++|+
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAK-VIGTATSESGAQAISDYL---GDNGKGMALNVTNPESIEAVLKAITDEFGG 83 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHh---cccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999985 55556653 333444444 345788999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.++++.|+++|
T Consensus 84 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (248)
T 3op4_A 84 VDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK---RQGRIINVGSVVGTMGNAGQANYAAAK 159 (248)
T ss_dssp CSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCCEEEEEcchhhcCCCCCChHHHHHH
Confidence 999999999987 7889999999999999999999999999999998754 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcC-CCCCCHHHHHHHHHHHHhcCc----e
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQDK----I 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~~----~ 467 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|....... ......... -+..+|+|..+++..++.... .
T Consensus 160 ~a~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG 236 (248)
T 3op4_A 160 AGVIGFTKSMAREVA--SRGVTVNTVAPGFIE-TDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITG 236 (248)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBS-STTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHH--HhCeEEEEEeeCCCC-CchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccC
Confidence 999999999887643 345688899887764 4443322111 111112222 234689999999988775432 3
Q ss_pred eeeeechh
Q psy616 468 QYLVLSGE 475 (1152)
Q Consensus 468 ~~~v~~~~ 475 (1152)
+.+.+++.
T Consensus 237 ~~i~vdgG 244 (248)
T 3op4_A 237 ETLHVNGG 244 (248)
T ss_dssp CEEEESTT
T ss_pred cEEEECCC
Confidence 55555544
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.3e-25 Score=241.35 Aligned_cols=225 Identities=14% Similarity=0.166 Sum_probs=172.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+... ...+..+++||++|+++++++++++.++||+|
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~~---------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 79 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGAQ-VLTTARARPE---------GLPEELFVEADLTTKEGCAIVAEATRQRLGGV 79 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTCE-EEEEESSCCT---------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSSC
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCCE-EEEEECCchh---------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999999985 5556665321 12234578999999999999999999999999
Q ss_pred eEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-CChhhhHH
Q psy616 315 DGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYAMG 392 (1152)
Q Consensus 315 dgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-g~~~Yaaa 392 (1152)
|++|||||+... ..++.+++.|+|++++++|+.|++++.|+++|+|++.. .+.||++||+++..+.+ ++..|+++
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~---~G~Iv~isS~~~~~~~~~~~~~Y~as 156 (261)
T 4h15_A 80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG---SGVVVHVTSIQRVLPLPESTTAYAAA 156 (261)
T ss_dssp SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTSCCTTTCHHHHHH
T ss_pred CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC---CceEEEEEehhhccCCCCccHHHHHH
Confidence 999999998542 35789999999999999999999999999999997643 46799999999999876 78999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----------ccchh-HHh---hcCC-CCCCHHHHHH
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQTDF-YFK---SSKQ-KVLHENDGLK 456 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~~~~-~~~---~~g~-~~l~~~e~~~ 456 (1152)
|+++.+|++.++.+.. ..++++.+|.+|... +.|..... +.... ..+ ...+ +.-+|+|...
T Consensus 157 Kaal~~lt~~lA~Ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~ 233 (261)
T 4h15_A 157 KAALSTYSKAMSKEVS--PKGVRVVRVSPGWIE-TEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVAN 233 (261)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHhh--hhCeEEEEEeCCCcC-CcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence 9999999999998865 456788899887764 33321100 00000 111 1111 2357899998
Q ss_pred HHHHHHhcCc----eeeeeechh
Q psy616 457 LFEQLLIQDK----IQYLVLSGE 475 (1152)
Q Consensus 457 ~l~~~l~~~~----~~~~v~~~~ 475 (1152)
++..+++... .+.+.++|-
T Consensus 234 ~v~fLaS~~a~~itG~~i~VDGG 256 (261)
T 4h15_A 234 LIAFLASDRAASITGAEYTIDGG 256 (261)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCchhcCccCcEEEECCc
Confidence 8887764332 255555554
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=241.95 Aligned_cols=231 Identities=17% Similarity=0.096 Sum_probs=183.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++++++.+|+. ..+++.++++..+.++.+++||++|+++++++++++.+++|+
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999997776656654 445666777888889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ .++||++||.++..+.++++.|+++|
T Consensus 106 iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~Y~asK 179 (267)
T 3u5t_A 106 VDVLVNNAGIMP-LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV-----GGRIINMSTSQVGLLHPSYGIYAAAK 179 (267)
T ss_dssp EEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CCeEEEEeChhhccCCCCchHHHHHH
Confidence 999999999987 788999999999999999999999999999998632 36899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-ccc-chhHHhhcCC-CCCCHHHHHHHHHHHHhcCc----
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK---- 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~---- 466 (1152)
+++.+|++.++.+.. ..++++.+|.+|.+. +.|.... ... .........+ +..+|+|..+++..++....
T Consensus 180 aa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it 256 (267)
T 3u5t_A 180 AGVEAMTHVLSKELR--GRDITVNAVAPGPTA-TDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVN 256 (267)
T ss_dssp HHHHHHHHHHHHHTT--TSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCC
T ss_pred HHHHHHHHHHHHHhh--hhCCEEEEEEECCCc-CccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence 999999999988754 446788999988775 4443211 111 1111111111 34689999999988775432
Q ss_pred eeeeeech
Q psy616 467 IQYLVLSG 474 (1152)
Q Consensus 467 ~~~~v~~~ 474 (1152)
.+.+.+++
T Consensus 257 G~~i~vdG 264 (267)
T 3u5t_A 257 GQVLRANG 264 (267)
T ss_dssp SEEEEESS
T ss_pred CCEEEeCC
Confidence 34554444
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-24 Score=240.75 Aligned_cols=236 Identities=13% Similarity=0.127 Sum_probs=187.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||++|||+++|+.|+++|++++++.++.+..+++.++++..+.++.+++||++|+++++++++++.+++|+|
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 110 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI 110 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999864444444455677788888888899999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC--CCChhhhHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--FGSCDYAMG 392 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~--~g~~~Yaaa 392 (1152)
|+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.|.|++.. ..+.||++||+++..+. .+.+.|+++
T Consensus 111 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--~~g~iv~isS~~~~~~~~~~~~~~Y~as 187 (276)
T 3r1i_A 111 DIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQG--LGGTIITTASMSGHIINIPQQVSHYCTS 187 (276)
T ss_dssp SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--SCEEEEEECCGGGTSCCCSSCCHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEECchHhcccCCCCCcchHHHH
Confidence 99999999987 77889999999999999999999999999999987542 24679999999998776 378899999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc----e
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK----I 467 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~----~ 467 (1152)
|+++++|++.++.+.. ..++++.+|.+|... +.|................+ +...|+|..+++..++.... .
T Consensus 188 Kaa~~~l~~~la~e~~--~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG 264 (276)
T 3r1i_A 188 KAAVVHLTKAMAVELA--PHQIRVNSVSPGYIR-TELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTG 264 (276)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-STTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHh--hcCcEEEEEeeCCCc-CCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence 9999999999887743 345688899888764 44543222211111222222 34689999999988876432 3
Q ss_pred eeeeechhh
Q psy616 468 QYLVLSGEL 476 (1152)
Q Consensus 468 ~~~v~~~~~ 476 (1152)
+.+.+++.+
T Consensus 265 ~~i~vdGG~ 273 (276)
T 3r1i_A 265 SDIVIDGGY 273 (276)
T ss_dssp CEEEESTTT
T ss_pred cEEEECcCc
Confidence 555555543
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-24 Score=243.29 Aligned_cols=236 Identities=13% Similarity=0.081 Sum_probs=184.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC------------cchHHHHHHHHhCCCcEEEEEecCCCHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS------------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMIS 302 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~------------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~ 302 (1152)
.++++|||||++|||+++|+.|+++|++++++..+. +..++..++++..+.++.+++||++|++++++
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 106 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA 106 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 589999999999999999999999998655544331 22345566677788899999999999999999
Q ss_pred HHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC
Q psy616 303 EINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 382 (1152)
Q Consensus 303 ~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g 382 (1152)
+++++.+++|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++. ...+.||++||+++..+
T Consensus 107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~~~g~Iv~isS~~~~~~ 184 (299)
T 3t7c_A 107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAG--KRGGSIVFTSSIGGLRG 184 (299)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCcEEEEECChhhccC
Confidence 9999999999999999999988723348899999999999999999999999999998653 23578999999999999
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----------ccchh------HHhhcC
Q psy616 383 DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQTDF------YFKSSK 445 (1152)
Q Consensus 383 ~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~~~~------~~~~~g 445 (1152)
.++++.|+++|+++++|++.++.+.. ..++++.+|.+|... +.|..... ..... ......
T Consensus 185 ~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 261 (299)
T 3t7c_A 185 AENIGNYIASKHGLHGLMRTMALELG--PRNIRVNIVCPSSVA-TPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP 261 (299)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESCBS-STTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhc--ccCcEEEEEecCCcc-CccccccchhhhhhhhhccchhhHHHHHhhhhcccC
Confidence 99999999999999999999988754 335688889887664 44432110 00000 011111
Q ss_pred CCCCCHHHHHHHHHHHHhcCc----eeeeeechh
Q psy616 446 QKVLHENDGLKLFEQLLIQDK----IQYLVLSGE 475 (1152)
Q Consensus 446 ~~~l~~~e~~~~l~~~l~~~~----~~~~v~~~~ 475 (1152)
.+..+|+|..+++..++.... .+.+.+++.
T Consensus 262 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 295 (299)
T 3t7c_A 262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295 (299)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence 245689999999988876432 355555554
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.1e-25 Score=238.31 Aligned_cols=215 Identities=16% Similarity=0.098 Sum_probs=169.2
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||++|||+++|+.|+++|++ |++++|+. ..++..+++ +.++.++++|++|+++++++++++.+++|++
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQ-VSMMGRRYQRLQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 689999999999999999999999985 66666663 334444444 3368999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. . +.||++||.++..+.++++.|+++|+
T Consensus 79 d~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~-~~iv~isS~~~~~~~~~~~~Y~asKa 153 (235)
T 3l6e_A 79 ELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER---G-GVLANVLSSAAQVGKANESLYCASKW 153 (235)
T ss_dssp SEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---C-EEEEEECCEECCSSCSSHHHHHHHHH
T ss_pred cEEEECCCCCC-CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---C-CEEEEEeCHHhcCCCCCCcHHHHHHH
Confidence 99999999977 7788899999999999999999999999999997542 2 38999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 469 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~ 469 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|...... ......++|+|..+.+..++..+...+
T Consensus 154 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~-------~~~~~~~~pedvA~~v~~l~~~~~~~~ 218 (235)
T 3l6e_A 154 GMRGFLESLRAELK--DSPLRLVNLYPSGIR-SEFWDNTDH-------VDPSGFMTPEDAAAYMLDALEARSSCH 218 (235)
T ss_dssp HHHHHHHHHHHHTT--TSSEEEEEEEEEEEC-CCC------------------CBCHHHHHHHHHHHTCCCSSEE
T ss_pred HHHHHHHHHHHHhh--ccCCEEEEEeCCCcc-CcchhccCC-------CCCcCCCCHHHHHHHHHHHHhCCCCcc
Confidence 99999999988743 446788888887664 444322111 011246899999999999887665433
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=239.87 Aligned_cols=222 Identities=11% Similarity=0.075 Sum_probs=180.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++..+.++.+++||++|+++++++++++.+++|+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGAD-LVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999985 5555665 4456677778888889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.....++.+.+.++|++++++|+.|++++.+++.|+|++. .+.||++||+++..+.+++..|+++|
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~~~~~~~Y~asK 164 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES----KGAVVNVNSMVVRHSQAKYGAYKMAK 164 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH----TCEEEEECCGGGGCCCTTCHHHHHHH
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCEEEEECcchhccCCCccHHHHHHH
Confidence 99999999986436788999999999999999999999999999998753 26899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc------------ccchhHHhhcCC-CCCCHHHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN------------EQTDFYFKSSKQ-KVLHENDGLKLFEQ 460 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~------------~~~~~~~~~~g~-~~l~~~e~~~~l~~ 460 (1152)
+++++|++.++.+.. ..++++.+|.+|.... .|..... ...........+ +..+|+|..+++..
T Consensus 165 aa~~~~~~~la~e~~--~~gi~vn~v~PG~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 241 (264)
T 3ucx_A 165 SALLAMSQTLATELG--EKGIRVNSVLPGYIWG-GTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILF 241 (264)
T ss_dssp HHHHHHHHHHHHHHH--TTTCEEEEEEESSCBS-HHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--ccCeEEEEEecCcccc-ccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHH
Confidence 999999999887743 3457888998887643 3321110 000111111112 34689999999888
Q ss_pred HHhc
Q psy616 461 LLIQ 464 (1152)
Q Consensus 461 ~l~~ 464 (1152)
++..
T Consensus 242 L~s~ 245 (264)
T 3ucx_A 242 MASD 245 (264)
T ss_dssp HHSG
T ss_pred HcCc
Confidence 7754
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=240.38 Aligned_cols=234 Identities=14% Similarity=0.087 Sum_probs=184.0
Q ss_pred CCCEEEEECCch--hHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCC-CcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFN-NKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~g--GIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g-~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
++|++||||++| |||+++|+.|+++|++ |++++|+ +..+++.+.+++.+ .++.+++||++|+++++++++++.++
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~-Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAK-LVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 589999999765 9999999999999985 5555665 45566677777654 57999999999999999999999999
Q ss_pred cCCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 311 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
||+||++|||||+... ...+.+.+.++|..++++|+.+++.+.+.+.++|+ +.+.||++||+++..+.+++.
T Consensus 84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~-----~~G~IVnisS~~~~~~~~~~~ 158 (256)
T 4fs3_A 84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP-----EGGSIVATTYLGGEFAVQNYN 158 (256)
T ss_dssp HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT-----TCEEEEEEECGGGTSCCTTTH
T ss_pred hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCEEEEEeccccccCcccch
Confidence 9999999999998641 24567889999999999999999999999877642 347899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|+++.+|++.++.+.. ..++++.+|.+|+.. +.|...... ..+...+...+ +..+|+|...++..+++
T Consensus 159 ~Y~asKaal~~ltr~lA~Ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~S 235 (256)
T 4fs3_A 159 VMGVAKASLEANVKYLALDLG--PDNIRVNAISAGPIR-TLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLS 235 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-SGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHhC--ccCeEEEEEecCCCC-ChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999988754 456788899888765 344332211 11222233323 34589999999888775
Q ss_pred cC----ceeeeeechhhh
Q psy616 464 QD----KIQYLVLSGELE 477 (1152)
Q Consensus 464 ~~----~~~~~v~~~~~~ 477 (1152)
.. ..+.+.++|-|.
T Consensus 236 d~a~~iTG~~i~VDGG~~ 253 (256)
T 4fs3_A 236 DLSSGVTGENIHVDSGFH 253 (256)
T ss_dssp GGGTTCCSCEEEESTTGG
T ss_pred chhcCccCCEEEECcCHH
Confidence 43 236777777664
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=242.49 Aligned_cols=235 Identities=12% Similarity=0.075 Sum_probs=188.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+. ..+++.++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAK-VVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999985 66677764 446667777777889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-cCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-~g~~g~~~Yaaa 392 (1152)
||+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++. .+.+++..|+++
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~~Y~as 162 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL---GGGSLTFTSSFVGHTAGFAGVAPYAAS 162 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCCEEEEEcChhhCcCCCCCchhHHHH
Confidence 99999999987435788999999999999999999999999999998753 34679999999998 788999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc-c---ccc-chhHHhhcC-CCCCCHHHHHHHHHHHHhcCc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-N---NEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~---~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
|+++++|++.++.+.. ..++++.+|.+|.... .|... . ... ......... -+..+|+|..+++..++....
T Consensus 163 Kaa~~~l~~~la~e~~--~~gIrvn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a 239 (280)
T 3tox_A 163 KAGLIGLVQALAVELG--ARGIRVNALLPGGTDT-PANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGA 239 (280)
T ss_dssp HHHHHHHHHHHHHHHH--TTTEEEEEEEECSBSS-TTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEEECCCCC-chhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccc
Confidence 9999999999987743 3456889999887754 33221 1 111 111111111 135689999999998886542
Q ss_pred ----eeeeeechhh
Q psy616 467 ----IQYLVLSGEL 476 (1152)
Q Consensus 467 ----~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 240 ~~itG~~i~vdGG~ 253 (280)
T 3tox_A 240 SFVTGAALLADGGA 253 (280)
T ss_dssp TTCCSCEEEESTTG
T ss_pred cCCcCcEEEECCCc
Confidence 3666666654
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-24 Score=240.81 Aligned_cols=234 Identities=17% Similarity=0.165 Sum_probs=185.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-------------chHHHHHHHHhCCCcEEEEEecCCCHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-------------LNSIIYKKLKKFNNKAIYIQVDVSDKLKMI 301 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-------------~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~ 301 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|++ ..++..+.++..+.++.++++|++|+++++
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 87 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGAD-IAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 5799999999999999999999999985 55556642 223445566777889999999999999999
Q ss_pred HHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc
Q psy616 302 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL 381 (1152)
Q Consensus 302 ~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~ 381 (1152)
++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~ 163 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR---NYGRIVTVSSMLGHS 163 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCC-CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGGS
T ss_pred HHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCCEEEEECChhhcC
Confidence 999999999999999999999987 7788999999999999999999999999999998754 346799999999999
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----------ccc---hhHH---hhc
Q psy616 382 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQT---DFYF---KSS 444 (1152)
Q Consensus 382 g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~~---~~~~---~~~ 444 (1152)
+.++++.|+++|+++++|++.++.+.. ..++++.+|.+|... +.|..... ... ...+ ...
T Consensus 164 ~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (281)
T 3s55_A 164 ANFAQASYVSSKWGVIGLTKCAAHDLV--GYGITVNAVAPGNIE-TPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQ 240 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEECSBC-STTTSSHHHHHC-------CCHHHHHHHHHHHCSS
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHh--hcCcEEEEEecCccc-CccccchhhhccccccccccchhHHHHHHHhhhcc
Confidence 999999999999999999999988743 345688899888775 44432100 000 0000 011
Q ss_pred CCCCCCHHHHHHHHHHHHhcCc----eeeeeechhh
Q psy616 445 KQKVLHENDGLKLFEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 445 g~~~l~~~e~~~~l~~~l~~~~----~~~~v~~~~~ 476 (1152)
.-+...|+|..+++..++.... .+.+.+++.+
T Consensus 241 ~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~ 276 (281)
T 3s55_A 241 YAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGA 276 (281)
T ss_dssp SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 1245689999999988876542 3555555543
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=241.69 Aligned_cols=235 Identities=13% Similarity=0.107 Sum_probs=186.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+ +..++..+++++ .+.++.++++|++|+++++++++++.+++|
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 97 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGAR-LVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG 97 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999985 5666665 444556666655 578899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++.. ..++||++||+++..+.+++..|+++
T Consensus 98 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~as 174 (266)
T 4egf_A 98 GLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG--EGGAIITVASAAALAPLPDHYAYCTS 174 (266)
T ss_dssp SCSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--SCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCeEEEEEcchhhccCCCCChHHHHH
Confidence 9999999999987 78899999999999999999999999999999987542 34689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc--
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK-- 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~-- 466 (1152)
|+++++|++.++.+.. ..++++.+|.+|... +.|.... ............+ +..+|+|..+++..++....
T Consensus 175 K~a~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~ 251 (266)
T 4egf_A 175 KAGLVMATKVLARELG--PHGIRANSVCPTVVL-TEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASM 251 (266)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEESCBC-SHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHh--hhCeEEEEEEeCCCc-CchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 9999999999987743 335688899887664 3342211 1111111222222 34679999999988876432
Q ss_pred --eeeeeechhh
Q psy616 467 --IQYLVLSGEL 476 (1152)
Q Consensus 467 --~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 252 itG~~i~vdGG~ 263 (266)
T 4egf_A 252 INGVDIPVDGGY 263 (266)
T ss_dssp CCSCEEEESTTG
T ss_pred ccCcEEEECCCc
Confidence 3555555543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=243.16 Aligned_cols=233 Identities=12% Similarity=0.135 Sum_probs=187.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|+ +|++++|+ +..++..++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 589999999999999999999999998 56666776 4456677788888889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..++||++||+++..+.+++..|+++|
T Consensus 104 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iV~isS~~~~~~~~~~~~Y~asK 179 (271)
T 4ibo_A 104 VDILVNNAGIQF-RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR---GYGKIVNIGSLTSELARATVAPYTVAK 179 (271)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEEccHHhCCCCCCchhHHHHH
Confidence 999999999987 7889999999999999999999999999999998754 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcC-CCCCCHHHHHHHHHHHHhcCc---
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQDK--- 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~~--- 466 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|..... ........... -+..+++|..+++..++....
T Consensus 180 aa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~i 256 (271)
T 4ibo_A 180 GGIKMLTRAMAAEWA--QYGIQANAIGPGYML-TDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYV 256 (271)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHh--hhCeEEEEEEeccEe-CcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence 999999999887643 345688899988775 34432111 11111112222 234678999988888775432
Q ss_pred -eeeeeechh
Q psy616 467 -IQYLVLSGE 475 (1152)
Q Consensus 467 -~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 257 tG~~i~vdGG 266 (271)
T 4ibo_A 257 NGQIIYVDGG 266 (271)
T ss_dssp CSCEEEESTT
T ss_pred CCcEEEECCC
Confidence 355555554
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=235.78 Aligned_cols=233 Identities=15% Similarity=0.135 Sum_probs=186.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|++|+++|++ |++++|+ +..++..++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGAT-VVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999985 5555665 4456677778888889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++. +.++||++||.++..+.+++..|+++|
T Consensus 83 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK 158 (247)
T 3lyl_A 83 IDILVNNAGITR-DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK---RWGRIISIGSVVGSAGNPGQTNYCAAK 158 (247)
T ss_dssp CSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCeEEEEEcchhhccCCCCcHHHHHHH
Confidence 999999999987 7788999999999999999999999999999998654 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHh-hcC-CCCCCHHHHHHHHHHHHhcCc----e
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFK-SSK-QKVLHENDGLKLFEQLLIQDK----I 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~-~~g-~~~l~~~e~~~~l~~~l~~~~----~ 467 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|............. ... -+..+++|..+.+..++.... .
T Consensus 159 ~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG 235 (247)
T 3lyl_A 159 AGVIGFSKSLAYEVA--SRNITVNVVAPGFIA-TDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITG 235 (247)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHH--HcCeEEEEEeeCcEe-cccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccC
Confidence 999999999887643 335688888887664 4443322221111111 111 234689999999988875432 3
Q ss_pred eeeeechh
Q psy616 468 QYLVLSGE 475 (1152)
Q Consensus 468 ~~~v~~~~ 475 (1152)
+.+.+++.
T Consensus 236 ~~i~vdgG 243 (247)
T 3lyl_A 236 QTLHVNGG 243 (247)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 45545443
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=236.06 Aligned_cols=223 Identities=13% Similarity=0.172 Sum_probs=179.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|++++++.+++ +..++..++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999998555444424 3345566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.+++..|+++|
T Consensus 83 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 158 (246)
T 2uvd_A 83 VDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ---RHGRIVNIASVVGVTGNPGQANYVAAK 158 (246)
T ss_dssp CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCTHHHHCCTTBHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEECCHHhcCCCCCCchHHHHH
Confidence 999999999987 6788899999999999999999999999999998754 246799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.+|++.++.+.. ..++++.+|.+|.+. +.|........ ........ .+..++++..+.+..++..
T Consensus 159 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~ 228 (246)
T 2uvd_A 159 AGVIGLTKTSAKELA--SRNITVNAIAPGFIA-TDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASD 228 (246)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBG-GGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEEecccc-CcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999998887643 345688899988764 44533211111 11111111 2357899999999888754
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=243.40 Aligned_cols=235 Identities=12% Similarity=0.101 Sum_probs=185.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++|||+++|+.|+++|+ +|++++|+ +..++..+++.. .+.++.++++|++|+++++++++++.+++|
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 689999999999999999999999998 55566666 344555555543 477899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++.. .+.||++||+++..+.+++..|+++
T Consensus 105 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~as 180 (277)
T 4fc7_A 105 RIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH---GGVIVNITATLGNRGQALQVHAGSA 180 (277)
T ss_dssp CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH---CEEEEEECCSHHHHTCTTCHHHHHH
T ss_pred CCCEEEECCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CCEEEEECchhhCCCCCCcHHHHHH
Confidence 9999999999887 77899999999999999999999999999999986543 4679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc---ccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC---
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD--- 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~--- 465 (1152)
|+++++|++.++.+.. ..++++.+|.+|.+....+... .............+ +..+++|..+++..++...
T Consensus 181 Kaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~ 258 (277)
T 4fc7_A 181 KAAVDAMTRHLAVEWG--PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASY 258 (277)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHhh--hcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCC
Confidence 9999999999887753 3356889999887764322111 01111111222222 3568999999999887643
Q ss_pred -ceeeeeechhh
Q psy616 466 -KIQYLVLSGEL 476 (1152)
Q Consensus 466 -~~~~~v~~~~~ 476 (1152)
..+.+.+++.+
T Consensus 259 itG~~i~vdGG~ 270 (277)
T 4fc7_A 259 VTGAVLVADGGA 270 (277)
T ss_dssp CCSCEEEESTTH
T ss_pred cCCCEEEECCCc
Confidence 23556565543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=238.32 Aligned_cols=218 Identities=16% Similarity=0.176 Sum_probs=171.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhC--C-CcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF--N-NKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~--g-~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.++++|||||++|||+++|+.|+++|+ +|++++|+ +..++..++++.. + .++.+++||++|.++++++++++.++
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 578999999999999999999999998 55666666 4445566666543 3 67899999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
+|+||+||||||+.. ...+ +.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.++++.|+
T Consensus 85 ~g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~ 159 (250)
T 3nyw_A 85 YGAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ---KNGYIFNVASRAAKYGFADGGIYG 159 (250)
T ss_dssp HCCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECC-------CCTTHHH
T ss_pred cCCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCeEEEEEccHHhcCCCCCCcchH
Confidence 999999999999987 6666 88999999999999999999999999998754 346799999999999888899999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCce
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
++|+++.+|++.++.+.. ..++++.+|.+|.+. +.|........ .....++|+|..+.+..++..+..
T Consensus 160 asKaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~------~~~~~~~p~dva~~v~~l~s~~~~ 227 (250)
T 3nyw_A 160 STKFALLGLAESLYRELA--PLGIRVTTLCPGWVN-TDMAKKAGTPF------KDEEMIQPDDLLNTIRCLLNLSEN 227 (250)
T ss_dssp HHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBC-SHHHHHTTCCS------CGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHHHhh--hcCcEEEEEecCccc-CchhhhcCCCc------ccccCCCHHHHHHHHHHHHcCCCc
Confidence 999999999999987743 345688899888774 44432111100 012357899999999999876543
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=239.21 Aligned_cols=233 Identities=13% Similarity=0.034 Sum_probs=183.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-CCC-cEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-FNN-KAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-~g~-~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++. .+. ++.+++||++|+++++++++++.+++
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAA-VAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 5799999999999999999999999985 5556666 444556666765 443 59999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ...+.||++||+++..+.+++..|++
T Consensus 86 g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~a 161 (265)
T 3lf2_A 86 GCASILVNNAGQGR-VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLES---RADAAIVCVNSLLASQPEPHMVATSA 161 (265)
T ss_dssp CSCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT---STTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCCeEEEEECCcccCCCCCCchhhHH
Confidence 99999999999987 788999999999999999999999999999999753 34578999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc----------ccchhHHhh---cC-CCCCCHHHHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN----------EQTDFYFKS---SK-QKVLHENDGLKL 457 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~----------~~~~~~~~~---~g-~~~l~~~e~~~~ 457 (1152)
+|+++++|++.++.+.. ..++++.+|.+|... +.|..... ......... .. -+..+|+|..++
T Consensus 162 sKaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 238 (265)
T 3lf2_A 162 ARAGVKNLVRSMAFEFA--PKGVRVNGILIGLVE-SGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARA 238 (265)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--ccCeEEEEEEeCcCc-CchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHH
Confidence 99999999999988754 345688899888764 33321110 000011111 11 134589999999
Q ss_pred HHHHHhcCc----eeeeeechh
Q psy616 458 FEQLLIQDK----IQYLVLSGE 475 (1152)
Q Consensus 458 l~~~l~~~~----~~~~v~~~~ 475 (1152)
+..++.... .+.+.+++.
T Consensus 239 v~fL~s~~~~~itG~~i~vdGG 260 (265)
T 3lf2_A 239 ILFLASPLSAYTTGSHIDVSGG 260 (265)
T ss_dssp HHHHHSGGGTTCCSEEEEESSS
T ss_pred HHHHhCchhcCcCCCEEEECCC
Confidence 988775432 355555554
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=240.73 Aligned_cols=224 Identities=12% Similarity=0.041 Sum_probs=171.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+. ..++..+++ +.++.+++||++|+++++++++++.+++|+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYG-VALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFGR 102 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999985 55666653 333333333 567899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++.. .+.+.||++||+++..+.++++.|+++|
T Consensus 103 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~~~g~IV~isS~~~~~~~~~~~~Y~asK 181 (272)
T 4dyv_A 103 VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQE-PRGGRIINNGSISATSPRPYSAPYTATK 181 (272)
T ss_dssp CCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS-SCCEEEEEECCSSTTSCCTTCHHHHHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-CCCcEEEEECchhhcCCCCCchHHHHHH
Confidence 999999999975346889999999999999999999999999999987532 1247899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHH-hhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-KSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++++|++.++.+.. ..++++.+|.+|.+. +.|............ .....+..+++|..+++..++..+.
T Consensus 182 aa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~ 252 (272)
T 4dyv_A 182 HAITGLTKSTSLDGR--VHDIACGQIDIGNAD-TPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPL 252 (272)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEEEECC-------------------------CHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHhC--ccCEEEEEEEECccc-ChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCCC
Confidence 999999999887743 345688888887665 444322111111101 1111235789999999999988654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=238.73 Aligned_cols=225 Identities=13% Similarity=0.079 Sum_probs=185.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|++|+++|+.++++.+|+. ..++..+++++.+.++.++.+|++|+++++++++++.+++|+
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA 104 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999998777777764 345667778788889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ...+.+.+.++|++++++|+.|++++.+.+++.|.+. ...++||++||.++..+.+++..|+++|
T Consensus 105 id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (267)
T 4iiu_A 105 WYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA--RQGGRIITLSSVSGVMGNRGQVNYSAAK 181 (267)
T ss_dssp CSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred ccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCcEEEEEcchHhccCCCCCchhHHHH
Confidence 999999999987 7888999999999999999999999999999887532 3457899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.|++.++.+.. ..++++.+|.+|.+. +.|................+ +..+++|..+++..++...
T Consensus 182 aa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~ 251 (267)
T 4iiu_A 182 AGIIGATKALAIELA--KRKITVNCIAPGLID-TGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDI 251 (267)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-STTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHh--hcCeEEEEEEEeeec-CCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence 999999999887743 335688999988775 44443222222222222222 3468999999999887643
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-24 Score=237.24 Aligned_cols=219 Identities=12% Similarity=0.115 Sum_probs=177.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|++|+++|++ |++++|+ +..++..+++...+.++.++.+|++|.++++++++++.+.+|+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999985 6666666 4456677778888889999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++. +.++||++||+++..+.+++..|+++|
T Consensus 107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 183 (262)
T 3rkr_A 107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA---KRGHIINISSLAGKNPVADGAAYTASK 183 (262)
T ss_dssp CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCCEEEEECSSCSSCCCTTCHHHHHHH
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCceEEEEechhhcCCCCCCchHHHHH
Confidence 99999999984326788999999999999999999999999999998653 356899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|...... .......++++|..+++..++....
T Consensus 184 aa~~~l~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~------~~~~~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 184 WGLNGLMTSAAEELR--QHQVRVSLVAPGSVR-TEFGVGLSA------KKSALGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECCC-----------------------CCCHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHHhh--hcCcEEEEEecCCCc-CCccccccc------ccccccCCCHHHHHHHHHHHhcCcc
Confidence 999999999887643 335688899888764 444322111 1112345799999999999887653
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-24 Score=240.64 Aligned_cols=235 Identities=11% Similarity=0.042 Sum_probs=182.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-----------------cchHHHHHHHHhCCCcEEEEEecCCCH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-----------------KLNSIIYKKLKKFNNKAIYIQVDVSDK 297 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-----------------~~~~~~~~~l~~~g~~v~~~~~Dvsd~ 297 (1152)
.++++|||||++|||+++|+.|+++|+++ ++++|+ +..++..++++..+.++.+++||++|+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADI-IAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEE-EEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeE-EEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 58999999999999999999999999865 444443 122345556667788999999999999
Q ss_pred HHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCC
Q psy616 298 LKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSS 377 (1152)
Q Consensus 298 ~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~ 377 (1152)
++++++++++.+++|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++.. ..+.||++||+
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~~g~iv~isS~ 166 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG--RGGSIILTSSV 166 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--SCEEEEEECCG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--CCcEEEEECch
Confidence 9999999999999999999999999876233488999999999999999999999999999987542 34689999999
Q ss_pred ccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----------ccc---hh---H
Q psy616 378 SAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQT---DF---Y 440 (1152)
Q Consensus 378 a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~~---~~---~ 440 (1152)
++..+.++++.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|..... ... .. .
T Consensus 167 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (286)
T 3uve_A 167 GGLKAYPHTGHYVAAKHGVVGLMRAFGVELG--QHMIRVNSVHPTHVK-TPMLHNEGTFKMFRPDLENPGPDDMAPICQM 243 (286)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBS-STTTSSHHHHHHHCTTSSSCCHHHHHHHHHT
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEecCccc-CCcccccchhhhccccccccchhhHHHHHHh
Confidence 9999999999999999999999999987754 345688899888765 44432110 000 00 0
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHhcCc----eeeeeechh
Q psy616 441 FKSSKQKVLHENDGLKLFEQLLIQDK----IQYLVLSGE 475 (1152)
Q Consensus 441 ~~~~g~~~l~~~e~~~~l~~~l~~~~----~~~~v~~~~ 475 (1152)
......+..+|+|..+++..++.... .+.+.+++.
T Consensus 244 ~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG 282 (286)
T 3uve_A 244 FHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282 (286)
T ss_dssp TCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCc
Confidence 01111244689999999888775432 355555554
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=238.10 Aligned_cols=233 Identities=13% Similarity=0.075 Sum_probs=185.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|++..++..+++...+.++.++.+|++|.++++++.+ ..+++|+|
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~~~~g~i 107 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAH-VLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAATRRV 107 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH-HHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-HHHhcCCC
Confidence 5899999999999999999999999985 555558777777788888888899999999999999999944 45667999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.+++..|+++|+
T Consensus 108 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~g~IV~isS~~~~~~~~~~~~Y~asKa 183 (273)
T 3uf0_A 108 DVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH---GSGRIVTIASMLSFQGGRNVAAYAASKH 183 (273)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCSSCHHHHHHHH
T ss_pred cEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCEEEEEcchHhcCCCCCChhHHHHHH
Confidence 99999999987 7889999999999999999999999999999998764 3467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC----c
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD----K 466 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~ 466 (1152)
++++|++.++.+.. ..++++.+|.+|.... .|.... ............+ +..+|+|..+++..++... .
T Consensus 184 a~~~l~~~la~e~~--~~gI~vn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~it 260 (273)
T 3uf0_A 184 AVVGLTRALASEWA--GRGVGVNALAPGYVVT-ANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVH 260 (273)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBCS-GGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHh--hcCcEEEEEEeCCCcC-CchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCc
Confidence 99999999987743 3456888898887653 332211 1111111222222 3578999999988877643 2
Q ss_pred eeeeeechhh
Q psy616 467 IQYLVLSGEL 476 (1152)
Q Consensus 467 ~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 261 G~~i~vdGG~ 270 (273)
T 3uf0_A 261 GQVLAVDGGW 270 (273)
T ss_dssp SCEEEESTTG
T ss_pred CCEEEECcCc
Confidence 3555555543
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-24 Score=239.58 Aligned_cols=217 Identities=10% Similarity=0.059 Sum_probs=178.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc--------hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--------NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS 306 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~--------~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 306 (1152)
+++++|||||++|||+++|+.|+++|+ +|++++|+.. .++..++++..+.++.+++||++|++++++++++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 83 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA 83 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 579999999999999999999999998 5666666532 3556667777788999999999999999999999
Q ss_pred HHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC--CC
Q psy616 307 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--DF 384 (1152)
Q Consensus 307 ~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g--~~ 384 (1152)
+.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.++||++||+++..+ .+
T Consensus 84 ~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~ 159 (274)
T 3e03_A 84 TVDTFGGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQ---APNPHILTLAPPPSLNPAWWG 159 (274)
T ss_dssp HHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTT---SSSCEEEECCCCCCCCHHHHH
T ss_pred HHHHcCCCCEEEECCCccc-CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHh---cCCceEEEECChHhcCCCCCC
Confidence 9999999999999999987 778899999999999999999999999999999754 34578999999999888 67
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
++..|+++|+++.+|++.++.+.. ..++++.+|.+|.+-++.|....... ......+|+|..+.+..++..
T Consensus 160 ~~~~Y~asKaal~~l~~~la~e~~--~~gI~vn~v~PG~~v~T~~~~~~~~~-------~~~~~~~pedvA~~v~~l~s~ 230 (274)
T 3e03_A 160 AHTGYTLAKMGMSLVTLGLAAEFG--PQGVAINALWPRTVIATDAINMLPGV-------DAAACRRPEIMADAAHAVLTR 230 (274)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEECSBCBCC-------CC-------CGGGSBCTHHHHHHHHHHHTS
T ss_pred CCchHHHHHHHHHHHHHHHHHHhh--hcCEEEEEEECCcccccchhhhcccc-------cccccCCHHHHHHHHHHHhCc
Confidence 899999999999999999988754 34578899998865566664211110 011256899999999998865
Q ss_pred C
Q psy616 465 D 465 (1152)
Q Consensus 465 ~ 465 (1152)
.
T Consensus 231 ~ 231 (274)
T 3e03_A 231 E 231 (274)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=239.36 Aligned_cols=234 Identities=12% Similarity=0.101 Sum_probs=181.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC--cchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~--~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||++|||+++|+.|+++|+ +|++++|+ +..++..++++.. +.++.++++|++|+++++++++++.+++
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 478999999999999999999999998 55666663 3345556666654 6789999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.++++.|++
T Consensus 103 g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~a 178 (281)
T 3v2h_A 103 GGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK---GWGRIINIASAHGLVASPFKSAYVA 178 (281)
T ss_dssp SSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCCEEEEECCcccccCCCCchHHHH
Confidence 99999999999987 7789999999999999999999999999999998764 3467999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-------------hhHHhhcC-CCCCCHHHHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-------------DFYFKSSK-QKVLHENDGLKL 457 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-------------~~~~~~~g-~~~l~~~e~~~~ 457 (1152)
+|+++++|++.++.+.. ..++++.+|.+|... +.|........ ........ -+..+++|..++
T Consensus 179 sKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~ 255 (281)
T 3v2h_A 179 AKHGIMGLTKTVALEVA--ESGVTVNSICPGYVL-TPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASL 255 (281)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-C----------------------------CCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh--hcCcEEEEEECCCCc-CcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Confidence 99999999999987743 335688889888765 33322111000 00111111 135689999999
Q ss_pred HHHHHhcCc----eeeeeechhh
Q psy616 458 FEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 458 l~~~l~~~~----~~~~v~~~~~ 476 (1152)
+..++.... .+.+.+++.+
T Consensus 256 v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 256 ALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp HHHHHSSGGGGCCSCEEEESTTG
T ss_pred HHHHcCCCcCCCCCcEEEECCCc
Confidence 888775442 3555555544
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-24 Score=238.76 Aligned_cols=221 Identities=12% Similarity=0.090 Sum_probs=178.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++++++..|+. ..++..++++..+.++.+++||++|+++++++++++.+++|+
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999997666666653 345667778888899999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc-cccCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS-AILGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a-~~~g~~g~~~Yaaa 392 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.||++||.+ +..+.++++.|+++
T Consensus 97 id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~~Y~as 170 (270)
T 3is3_A 97 LDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-----GGRIVLTSSNTSKDFSVPKHSLYSGS 170 (270)
T ss_dssp CCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-----TCEEEEECCTTTTTCCCTTCHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCeEEEEeCchhccCCCCCCchhHHH
Confidence 999999999987 788999999999999999999999999999998642 46799999988 66788999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------ccc-chhHHhhcCC-CCCCHHHHHHHH
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQ-TDFYFKSSKQ-KVLHENDGLKLF 458 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~-~~~~~~~~g~-~~l~~~e~~~~l 458 (1152)
|+++++|++.++.+.. ..++++.+|.+|... +.|.... ... .........+ +...|+|..+++
T Consensus 171 Kaa~~~~~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 247 (270)
T 3is3_A 171 KGAVDSFVRIFSKDCG--DKKITVNAVAPGGTV-TDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVV 247 (270)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBC-STTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEEeCCcc-ChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 9999999999988753 345688888887665 3442210 000 0111111111 245688998888
Q ss_pred HHHHhc
Q psy616 459 EQLLIQ 464 (1152)
Q Consensus 459 ~~~l~~ 464 (1152)
..++..
T Consensus 248 ~~L~s~ 253 (270)
T 3is3_A 248 GFLVSK 253 (270)
T ss_dssp HHHTSG
T ss_pred HHHcCC
Confidence 877754
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=241.68 Aligned_cols=219 Identities=15% Similarity=0.084 Sum_probs=180.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc--------hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--------NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS 306 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~--------~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 306 (1152)
+++++|||||++|||+++|++|+++|+ +|++++|+.. .++..++++..+.++.+++||++|++++++++++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 579999999999999999999999998 5666666532 4566777777788999999999999999999999
Q ss_pred HHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-CC
Q psy616 307 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-FG 385 (1152)
Q Consensus 307 ~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-~g 385 (1152)
+.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ...++||++||.++..+. ++
T Consensus 87 ~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~ 162 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKG---RDNPHILTLSPPIRLEPKWLR 162 (285)
T ss_dssp HHHHHSCCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTT---SSSCEEEECCCCCCCSGGGSC
T ss_pred HHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCcEEEEECChhhccCCCCC
Confidence 9999999999999999987 788999999999999999999999999999998643 345789999999999886 88
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+..|+++|+++++|++.++.+.. ..++++.+|.+|.+.++.|....... ...--+..+|+|..+.+..++...
T Consensus 163 ~~~Y~asKaal~~~~~~la~e~~--~~gI~vn~v~PG~~v~t~~~~~~~~~-----~~~~~r~~~pedvA~~~~~l~s~~ 235 (285)
T 3sc4_A 163 PTPYMMAKYGMTLCALGIAEELR--DAGIASNTLWPRTTVATAAVQNLLGG-----DEAMARSRKPEVYADAAYVVLNKP 235 (285)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTG--GGTCEEEEEECSSCBCCHHHHHHHTS-----CCCCTTCBCTHHHHHHHHHHHTSC
T ss_pred CchHHHHHHHHHHHHHHHHHHhc--ccCcEEEEEeCCCccccHHHHhhccc-----cccccCCCCHHHHHHHHHHHhCCc
Confidence 99999999999999999988754 34578999998854455543211000 000113568999999999888755
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=237.31 Aligned_cols=234 Identities=14% Similarity=0.196 Sum_probs=170.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||++|||+++|++|+++|++++++..+.+..++..+++ +.++.++++|++|+++++++++++.+++|+|
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEFGHV 82 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999986544444334444444433 5678999999999999999999999999999
Q ss_pred eEEEEcccccCcCccc----ccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcC---CCCCEEEEecCCccccCCCCCh
Q psy616 315 DGVLHIAGISGLTSNI----LEANYKNFYSVLSSKISGTIALNYALENTILKLQK---NKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~----~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~---~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
|+||||||+.. ...+ .+.+.++|++++++|+.|++++.+++.|+|++... ...++||++||+++..+.+++.
T Consensus 83 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 161 (257)
T 3tpc_A 83 HGLVNCAGTAP-GEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQA 161 (257)
T ss_dssp CEEEECCCCCC-CCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred CEEEECCCCCC-CCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCc
Confidence 99999999876 4433 36889999999999999999999999999864311 2457899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC--CCCCCHHHHHHHHHHHHhc
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK--QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g--~~~l~~~e~~~~l~~~l~~ 464 (1152)
.|+++|+++++|++.++.+.. ..++++.+|.+|.+.. .|........ ........ -+..+++|..+++..++..
T Consensus 162 ~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v~PG~v~t-~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~ 238 (257)
T 3tpc_A 162 AYAASKGGVAALTLPAARELA--RFGIRVVTIAPGIFDT-PMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICEN 238 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBSC-C--------------CCSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHH--HcCeEEEEEEeCCCCC-hhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc
Confidence 999999999999999887643 3356888999887753 4432211111 11111111 2346899999999988865
Q ss_pred C--ceeeeeechh
Q psy616 465 D--KIQYLVLSGE 475 (1152)
Q Consensus 465 ~--~~~~~v~~~~ 475 (1152)
. ..+.+.+++.
T Consensus 239 ~~itG~~i~vdGG 251 (257)
T 3tpc_A 239 TMLNGEVIRLDGA 251 (257)
T ss_dssp TTCCSCEEEESTT
T ss_pred CCcCCcEEEECCC
Confidence 3 2355555554
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=239.29 Aligned_cols=231 Identities=15% Similarity=0.168 Sum_probs=170.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++ |++.+|+. ..++. .+..+.++.++++|++|+++++++++++.+++|+
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~-V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAI-VGLHGTREDKLKEI---AADLGKDVFVFSANLSDRKSIKQLAEVAEREMEG 101 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHH---HHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHH---HHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999985 55556653 22333 3344778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.+++..|+++|
T Consensus 102 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~Iv~isS~~~~~~~~~~~~Y~asK 177 (266)
T 3grp_A 102 IDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR---RYGRIINITSIVGVVGNPGQTNYCAAK 177 (266)
T ss_dssp CCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCC-------CHHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CCcEEEEECCHHHcCCCCCchhHHHHH
Confidence 999999999987 7788899999999999999999999999999998754 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcCC-CCCCHHHHHHHHHHHHhcCc----e
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK----I 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~----~ 467 (1152)
+++++|++.++.+.. ..++++.+|.+|.+.. .|....... .........+ +...++|..+++..++.... .
T Consensus 178 aa~~~~~~~la~e~~--~~gI~vn~v~PG~v~t-~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG 254 (266)
T 3grp_A 178 AGLIGFSKALAQEIA--SRNITVNCIAPGFIKS-AMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTG 254 (266)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBCS-HHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEeeCcCCC-chhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence 999999999887743 3356888998887753 443222111 1111122222 24578999999888775432 3
Q ss_pred eeeeechhh
Q psy616 468 QYLVLSGEL 476 (1152)
Q Consensus 468 ~~~v~~~~~ 476 (1152)
+.+.+++.+
T Consensus 255 ~~i~vdGG~ 263 (266)
T 3grp_A 255 QTLHINGGM 263 (266)
T ss_dssp CEEEESTTC
T ss_pred CEEEECCCe
Confidence 555555543
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-24 Score=238.59 Aligned_cols=235 Identities=16% Similarity=0.134 Sum_probs=185.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCC---cEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNN---KAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~---~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+ +..++..+++++.+. ++.++++|++|+++++++++++.++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGAS-VMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999985 5555665 445666777877665 8999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
+|+||+||||||+.....++.+.+.++|++++++|+.|++++.+++.|.|++. ..+.||++||+++..+.++++.|+
T Consensus 89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~ 165 (281)
T 3svt_A 89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG---GGGSFVGISSIAASNTHRWFGAYG 165 (281)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCEEEEEECCHHHHSCCTTCTHHH
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEeCHHHcCCCCCChhHH
Confidence 99999999999984436788999999999999999999999999999998653 356899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~ 466 (1152)
++|+++++|++.++.+.. ..++++.+|.+|... +.|.... ............+ +..+++|..+++..++....
T Consensus 166 asK~a~~~l~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~ 242 (281)
T 3svt_A 166 VTKSAVDHLMQLAADELG--ASWVRVNSIRPGLIR-TDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAA 242 (281)
T ss_dssp HHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHhh--hcCeEEEEEEeCcCc-CcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 999999999999887643 345688889888764 4443211 0111111122222 34589999999988876432
Q ss_pred ----eeeeeechhh
Q psy616 467 ----IQYLVLSGEL 476 (1152)
Q Consensus 467 ----~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 243 ~~itG~~~~vdgG~ 256 (281)
T 3svt_A 243 SFVTGQVINVDGGQ 256 (281)
T ss_dssp TTCCSCEEEESTTG
T ss_pred CCCCCCEEEeCCCh
Confidence 3555555543
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-24 Score=239.31 Aligned_cols=236 Identities=14% Similarity=0.169 Sum_probs=184.3
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
...++++|||||++|||+++|++|+++|++++++..|+. ..++..++++..+.++.++.||++|.++++++++++.+++
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 356899999999999999999999999986655554543 3344555666678889999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++. ..++||++||.++..+.++++.|++
T Consensus 102 g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~a 177 (269)
T 3gk3_A 102 GKVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER---RFGRIVNIGSVNGSRGAFGQANYAS 177 (269)
T ss_dssp SCCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred CCCCEEEECCCcCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCEEEEeCChhhccCCCCcchHHH
Confidence 99999999999987 7788899999999999999999999999999998754 3467999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-h-hHHhhcCC-CCCCHHHHHHHHHHHHhcCc--
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-D-FYFKSSKQ-KVLHENDGLKLFEQLLIQDK-- 466 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~-~~~~~~g~-~~l~~~e~~~~l~~~l~~~~-- 466 (1152)
+|+++++|++.++.+.. ..++++.+|.+|.+. +.|........ . .......+ +..++++..+.+..++....
T Consensus 178 sKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~ 254 (269)
T 3gk3_A 178 AKAGIHGFTKTLALETA--KRGITVNTVSPGYLA-TAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGF 254 (269)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTT
T ss_pred HHHHHHHHHHHHHHHhh--hcCCEEEEEecCccc-chhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCC
Confidence 99999999999887643 335688899988775 44433221110 0 11111111 24589999999988876542
Q ss_pred --eeeeeechh
Q psy616 467 --IQYLVLSGE 475 (1152)
Q Consensus 467 --~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 255 itG~~i~vdgG 265 (269)
T 3gk3_A 255 VTGADLAINGG 265 (269)
T ss_dssp CCSCEEEESTT
T ss_pred eeCcEEEECCC
Confidence 345555543
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-24 Score=235.65 Aligned_cols=233 Identities=15% Similarity=0.122 Sum_probs=181.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+ +..++..+++ +.++.++.+|++|+++++++++++.+++|+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGAR-VVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTFGR 85 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999985 5555555 4445544444 677899999999999999999999999999
Q ss_pred eeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+|+||||||+... ...+.+.+.++|++++++|+.|++++.++++|+|++. ..++||++||+++..+.+++..|+++
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~as 162 (271)
T 3tzq_B 86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA---GGGAIVNISSATAHAAYDMSTAYACT 162 (271)
T ss_dssp CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCEEEEEECCGGGTSBCSSCHHHHHH
T ss_pred CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCEEEEECCHHHcCCCCCChHHHHH
Confidence 9999999998732 4567899999999999999999999999999998653 35789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC-CCCCCHHHHHHHHHHHHhcCc----
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQDK---- 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~~~---- 466 (1152)
|+++++|++.++.+.. ..++++.+|.+|......+........ ........ -+..+|+|..+++..++....
T Consensus 163 Kaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~it 240 (271)
T 3tzq_B 163 KAAIETLTRYVATQYG--RHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFIT 240 (271)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHh--hcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcC
Confidence 9999999999988743 345688899888775433221111111 11111111 134589999999998876542
Q ss_pred eeeeeechhh
Q psy616 467 IQYLVLSGEL 476 (1152)
Q Consensus 467 ~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 241 G~~i~vdGG~ 250 (271)
T 3tzq_B 241 GQVIAADSGL 250 (271)
T ss_dssp SCEEEESTTT
T ss_pred CCEEEECCCc
Confidence 3566666553
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-23 Score=233.35 Aligned_cols=223 Identities=16% Similarity=0.118 Sum_probs=178.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc---hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL---NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~---~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++++|||||+||||+++|+.|+++|++ |+++.|+.. .++..++++..+.++.++++|++|+++++++++++.+++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFD-IAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG 80 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999985 555566543 4556667777778899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++... .+.||++||+++..+.+++..|+++
T Consensus 81 ~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~s 157 (258)
T 3a28_C 81 GFDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGV--KGKIINAASIAAIQGFPILSAYSTT 157 (258)
T ss_dssp CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--CcEEEEECcchhccCCCCchhHHHH
Confidence 9999999999987 678889999999999999999999999999999875421 2679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc----------c--cccchhHHhhcCC-CCCCHHHHHHHHH
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG----------N--NEQTDFYFKSSKQ-KVLHENDGLKLFE 459 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~----------~--~~~~~~~~~~~g~-~~l~~~e~~~~l~ 459 (1152)
|+++++|++.++.+.. ..++++.+|.+|... +.|... . ............+ +..+|+|..+++.
T Consensus 158 K~a~~~~~~~la~e~~--~~gi~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 234 (258)
T 3a28_C 158 KFAVRGLTQAAAQELA--PKGHTVNAYAPGIVG-TGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVS 234 (258)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-SHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--hhCeEEEEEECCccC-ChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence 9999999999887643 335688889887664 444221 0 0001111111111 3568999999998
Q ss_pred HHHhcC
Q psy616 460 QLLIQD 465 (1152)
Q Consensus 460 ~~l~~~ 465 (1152)
.++...
T Consensus 235 ~l~s~~ 240 (258)
T 3a28_C 235 FLASEN 240 (258)
T ss_dssp HHHSGG
T ss_pred HHhCcc
Confidence 887543
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.2e-24 Score=230.15 Aligned_cols=215 Identities=14% Similarity=0.114 Sum_probs=177.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++|||+++|++|+++|++ |++++|+ +..++..+++. ..+.++.+++||++|+++++++++++.+++|
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYA-LALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 3689999999999999999999999985 6666666 34455556664 5578899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ..+.+|++||..+..+.++.+.|+++
T Consensus 80 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----~~~~ii~~sS~~~~~~~~~~~~Y~~s 154 (235)
T 3l77_A 80 DVDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR----TGGLALVTTSDVSARLIPYGGGYVST 154 (235)
T ss_dssp SCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----HTCEEEEECCGGGSSCCTTCHHHHHH
T ss_pred CCCEEEECCcccc-ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCCcEEEEecchhcccCCCcchHHHH
Confidence 9999999999987 788899999999999999999999999999999843 23569999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
|+++++|++.+..+ ..++++.+|.+|... +.|......... ....++|+|..+.+..++..+.
T Consensus 155 Kaa~~~~~~~l~~~----~~~i~v~~v~PG~v~-T~~~~~~~~~~~------~~~~~~p~dva~~v~~l~~~~~ 217 (235)
T 3l77_A 155 KWAARALVRTFQIE----NPDVRFFELRPGAVD-TYFGGSKPGKPK------EKGYLKPDEIAEAVRCLLKLPK 217 (235)
T ss_dssp HHHHHHHHHHHHHH----CTTSEEEEEEECSBS-SSTTTCCSCCCG------GGTCBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHhhc----CCCeEEEEEeCCccc-cccccccCCccc------ccCCCCHHHHHHHHHHHHcCCC
Confidence 99999999998543 346788999888664 455432221111 1246899999999999987664
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.1e-24 Score=241.81 Aligned_cols=236 Identities=15% Similarity=0.150 Sum_probs=183.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC------------cchHHHHHHHHhCCCcEEEEEecCCCHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS------------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMIS 302 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~------------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~ 302 (1152)
.++++|||||++|||+++|+.|+++|++++++..+. +..++..+.++..+.++.++++|++|++++++
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 124 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 579999999999999999999999999665554331 12234455667778899999999999999999
Q ss_pred HHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC
Q psy616 303 EINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 382 (1152)
Q Consensus 303 ~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g 382 (1152)
+++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ...+.||++||+++..+
T Consensus 125 ~~~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--~~~g~Iv~isS~~~~~~ 201 (317)
T 3oec_A 125 VVDEALAEFGHIDILVSNVGISN-QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIER--GQGGSVIFVSSTVGLRG 201 (317)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--CSCEEEEEECCGGGSSC
T ss_pred HHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCCEEEEECcHHhcCC
Confidence 99999999999999999999987 7788999999999999999999999999999998653 23578999999999999
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----------ccc---hhHHhh---cC
Q psy616 383 DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQT---DFYFKS---SK 445 (1152)
Q Consensus 383 ~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~~---~~~~~~---~g 445 (1152)
.+++..|+++|+++++|++.++.+.. ..++++.+|.+|... +.|..... ... ...+.. ..
T Consensus 202 ~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 278 (317)
T 3oec_A 202 APGQSHYAASKHGVQGLMLSLANEVG--RHNIRVNSVNPGAVN-TEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP 278 (317)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBS-SHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHh--hcCeEEEEEecCccc-CccccchhhhhhhhhhccccchhHHHHHHhhhccCC
Confidence 99999999999999999999987743 335688899888764 34321100 000 000111 11
Q ss_pred CCCCCHHHHHHHHHHHHhcCc----eeeeeechhh
Q psy616 446 QKVLHENDGLKLFEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 446 ~~~l~~~e~~~~l~~~l~~~~----~~~~v~~~~~ 476 (1152)
.+...++|..+++..++.... .+.+.+++.+
T Consensus 279 ~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~ 313 (317)
T 3oec_A 279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ 313 (317)
T ss_dssp SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence 234589999999888775432 3555555543
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-24 Score=237.25 Aligned_cols=233 Identities=15% Similarity=0.194 Sum_probs=183.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecC-Cc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR-SK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R-~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||++|||+++|++|+++|++ |++++| .. ..+...+.++..+.++.++++|++|+++++++++++.+.+|
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 106 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLK-VWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG 106 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999985 444555 43 33455667777888999999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||+||||||+.. ...+.+.+.++|++++++|+.|++++.+.++|.|++. +.++||++||+++..+.++++.|+++
T Consensus 107 ~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~as 182 (271)
T 4iin_A 107 GLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS---RFGSVVNVASIIGERGNMGQTNYSAS 182 (271)
T ss_dssp SCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred CCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc---CCCEEEEEechhhcCCCCCchHhHHH
Confidence 9999999999988 7788899999999999999999999999999998754 34679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC-CCCCCHHHHHHHHHHHHhcCc----
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQDK---- 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~~~---- 466 (1152)
|++++.|++.++.+.. ..++++.+|.+|.+. +.|........ ........ .+..+++|..+++..++....
T Consensus 183 K~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~it 259 (271)
T 4iin_A 183 KGGMIAMSKSFAYEGA--LRNIRFNSVTPGFIE-TDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYIT 259 (271)
T ss_dssp HHHHHHHHHHHHHHHH--TTTEEEEEEEECSBC-CC------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHH--HhCcEEEEEEeCccc-CCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCc
Confidence 9999999999887743 345688899888774 44533221111 11111112 234689999999998886432
Q ss_pred eeeeeechh
Q psy616 467 IQYLVLSGE 475 (1152)
Q Consensus 467 ~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 260 G~~i~vdGG 268 (271)
T 4iin_A 260 GETLKVNGG 268 (271)
T ss_dssp SCEEEESTT
T ss_pred CCEEEeCCC
Confidence 345544443
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-24 Score=237.55 Aligned_cols=233 Identities=15% Similarity=0.155 Sum_probs=181.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|+.|+++|++++++.+|+. ..++..++++..+.++.+++||++|+++++++++++.+++|+
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 5799999999999999999999999997666646554 345666778888888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-cCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-~g~~g~~~Yaaa 392 (1152)
||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++ .++||++||+++. .+.+++..|+++
T Consensus 87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~~Y~as 161 (259)
T 3edm_A 87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK-----GGAIVTFSSQAGRDGGGPGALAYATS 161 (259)
T ss_dssp EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEECCHHHHHCCSTTCHHHHHH
T ss_pred CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCEEEEEcCHHhccCCCCCcHHHHHH
Confidence 9999999998733678899999999999999999999999999988632 4689999999998 788999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--ccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC----
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD---- 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~---- 465 (1152)
|+++++|++.++.+.. . .+++.+|.+|... +.|..... ........... -+..+|+|..+++..++...
T Consensus 162 Kaa~~~l~~~la~e~~--~-~I~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~i 237 (259)
T 3edm_A 162 KGAVMTFTRGLAKEVG--P-KIRVNAVCPGMIS-TTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYV 237 (259)
T ss_dssp HHHHHHHHHHHHHHHT--T-TCEEEEEEECCBC-C----------------------CCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHC--C-CCEEEEEEECCCc-CcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence 9999999999988743 2 3788899888764 44432211 11111111111 13458999999999887654
Q ss_pred ceeeeeechhh
Q psy616 466 KIQYLVLSGEL 476 (1152)
Q Consensus 466 ~~~~~v~~~~~ 476 (1152)
..+.+.++|.+
T Consensus 238 tG~~i~vdGg~ 248 (259)
T 3edm_A 238 TGACYDINGGV 248 (259)
T ss_dssp CSCEEEESBCS
T ss_pred cCCEEEECCCc
Confidence 23666666654
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.3e-24 Score=235.93 Aligned_cols=230 Identities=15% Similarity=0.170 Sum_probs=180.4
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
..+++++|||||++|||+++|++|+++|++++++..|+. ..++..++++..+.++.++.+|++|.++++++++++.+++
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 456899999999999999999999999997767667764 3455667777788899999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-CChhhh
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYA 390 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-g~~~Ya 390 (1152)
|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++......+.||++||+++..+.+ +...|+
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~ 182 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA 182 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence 9999999999987633778899999999999999999999999999998765444567899999999999887 778999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--ccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++|++++.|++.++.+.. ..++++.+|.+|.+.. .|..... ........... .+..+++|..+.+..++...
T Consensus 183 asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~ 257 (272)
T 4e3z_A 183 ASKAAIDTFTIGLAREVA--AEGIRVNAVRPGIIET-DLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPS 257 (272)
T ss_dssp HHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHH--HcCcEEEEEecCCCcC-CcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCc
Confidence 999999999998887643 3356889999887753 3322110 11111111111 12356999999999887543
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-24 Score=234.42 Aligned_cols=220 Identities=14% Similarity=0.125 Sum_probs=174.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|+.|+++|++ |++++|+. ..++..++ .+.++.+++||++|+++++++++++.+++|+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGAT-VAIADIDIERARQAAAE---IGPAAYAVQMDVTRQDSIDAAIAATVEHAGG 82 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHH---HCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHH---hCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999985 55566653 22333333 3667899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++.. ..++||++||+++..+.++...|+++|
T Consensus 83 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (259)
T 4e6p_A 83 LDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQG--RGGKIINMASQAGRRGEALVAIYCATK 159 (259)
T ss_dssp CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--SCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCeEEEEECChhhccCCCCChHHHHHH
Confidence 999999999987 78899999999999999999999999999999987542 246899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhhcCC-CCCCHHHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQ-KVLHENDGLKLFEQ 460 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~-~~l~~~e~~~~l~~ 460 (1152)
++++.|++.++.+.. ..++++.+|.+|..... |.... ............+ +...++|..+++..
T Consensus 160 ~a~~~~~~~la~e~~--~~gi~vn~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~ 236 (259)
T 4e6p_A 160 AAVISLTQSAGLDLI--KHRINVNAIAPGVVDGE-HWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIF 236 (259)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBCST-THHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh--hcCCEEEEEEECCCccc-hhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 999999999887643 33568888988877543 21110 0111111111222 35688899888877
Q ss_pred HHhc
Q psy616 461 LLIQ 464 (1152)
Q Consensus 461 ~l~~ 464 (1152)
++..
T Consensus 237 L~s~ 240 (259)
T 4e6p_A 237 LASA 240 (259)
T ss_dssp TTSG
T ss_pred HhCC
Confidence 7653
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.7e-26 Score=264.61 Aligned_cols=320 Identities=14% Similarity=0.097 Sum_probs=227.1
Q ss_pred EEEEeeeeccCC-CCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHHH
Q psy616 633 IAIIGMSGRFPA-ARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLE 711 (1152)
Q Consensus 633 IaIvGm~~~~P~-~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~e 711 (1152)
+.|+||++.+|. -.+.++||+.+.... .+.|.++|... ++.. ..+..+ .+..+.+.|+ .+|++++++
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~---~~~~~~~~~~~-i~~~-----~GI~~R--~~~~~~~~~~-~~~~~~~r~ 77 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRH---TDHPQLPLALR-LIEN-----TGVRTR--HIVQPIEDTL-EHPGFEDRN 77 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHH---TTCTTHHHHHH-HHHH-----TCCCEE--EESSCHHHHT-SCCCHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhc---cChhhHHHHHH-HHHh-----cCCCcc--eeecChhhhc-cCCChhHHH
Confidence 689999999998 467899999875432 24443333211 1110 011112 1233345576 678899999
Q ss_pred hhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccc
Q psy616 712 AERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVM 789 (1152)
Q Consensus 712 a~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~ 789 (1152)
+...++..+++++++++||+|||+++++++ +|++|+... +. . ...+.+|++.||++| |++
T Consensus 78 ~~~~~~~~~la~~Aa~~aL~~agl~~~~id----~vi~~t~~~-~~--------~-----p~~a~~v~~~lGl~~~~~~~ 139 (382)
T 1u0m_A 78 KVYEREAKSRVPAVIQRALDDAELLATDID----VIIYVSCTG-FM--------M-----PSLTAWLINEMGFDSTTRQI 139 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGCS----EEEEECSSS-CC--------S-----SCHHHHHHHHTTCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEEecCC-CC--------C-----CcHHHHHHHHhCCCCCcceE
Confidence 999999999999999999999999988776 677776543 10 1 135789999999999 899
Q ss_pred cc-cccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCC----CcccccccEE
Q psy616 790 AI-NTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN----GLVPSEAVVA 864 (1152)
Q Consensus 790 tv-dtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~----G~v~gEG~~~ 864 (1152)
+| +++|+|++.||+.|++.|++|++|.+||+|++.+ ++. .++||.+.+ |+++|||+++
T Consensus 140 ~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~----------------~~~~d~~~~~~~~~~lfGDGA~A 202 (382)
T 1u0m_A 140 PIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC-SLC----------------YQPTDLGVGSLLCNGLFGDGIAA 202 (382)
T ss_dssp EECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG-GGG----------------CCTTCCSHHHHHHHHHBCEEEEE
T ss_pred EccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEecc-chh----------------cCcccCCHHHhhccchhcCCcEE
Confidence 99 9999999999999999999999999999999974 321 134554433 9999999999
Q ss_pred EEEcccchhhcCCCceEEEEEEEEEecCCCC--------------CCCCCCC--HHHHHHHHHHHHHHcCCCCCCccEEE
Q psy616 865 VVLKRLSRALSDGDPIHAIIRGSGINYDGKT--------------NGITAPN--GISQTELIKSVYKKSNLNPEDINYII 928 (1152)
Q Consensus 865 vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~--------------~~~~~P~--~~~q~~~i~~al~~Agi~p~dI~yve 928 (1152)
+||++.++ +|.+|++... ..+.|+.. .+-..|+ ...+. +|+++|+++|++++||+||+
T Consensus 203 ~vL~~~~~---~g~~i~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~ 276 (382)
T 1u0m_A 203 AVVRGRGG---TGVRLERNGS--YLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYI 276 (382)
T ss_dssp EEEETTTC---SEEEEEEEEE--EECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCE
T ss_pred EEEeccCC---CCcEEEEeee--EecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEE
Confidence 99997654 3444444332 22444432 0112233 56778 99999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhcccCCCCCceee-eccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCccccc
Q psy616 929 THGTGTKLGDPVEINALHDVFKNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIIL 1007 (1152)
Q Consensus 929 ~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~i-gsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~ 1007 (1152)
+|+++|++.|. +.+.++-.. . .+.+ .+++.++||+.+|+....|..++ +.+.+.+
T Consensus 277 ~H~~~~~i~d~-----~~~~lgl~~--~-k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g~~~~------------- 332 (382)
T 1u0m_A 277 VHAGGPRILDD-----LSTFLEVDP--H-AFRFSRATLTEYGNIASAVVLDALRRLF---DEGGVEE------------- 332 (382)
T ss_dssp EECSHHHHHHH-----HHHHSCSCG--G-GGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSCCCCS-------------
T ss_pred ECCCCHHHHHH-----HHHHcCCCH--H-HHHHHHHHHHHhCCchhhHHHHHHHHHH---HhcCCCC-------------
Confidence 99999997765 444554321 1 1222 35788999999999888776554 3332211
Q ss_pred CCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1008 KNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1008 ~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+ .+.++.+||.|.+.+.++|+-
T Consensus 333 ------------------G--d~vll~~~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 333 ------------------G--ARGLLAGFGPGITAEMSLGCW 354 (382)
T ss_dssp ------------------S--CCCEEEEEETTTEEEEEEEEE
T ss_pred ------------------C--CEEEEEEEcccceeEEEEEEE
Confidence 1 234688999999999999963
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=256.40 Aligned_cols=290 Identities=16% Similarity=0.191 Sum_probs=209.6
Q ss_pred cEEEEeeeeccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 632 LIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 632 ~IaIvGm~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
.+.|+|+++.+|.. .+.++||+.+.. + ++|-. ..+||..+
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~~~--------~-~~~i~------------------------------~~~Gi~~R 45 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAELDT--------S-DAWIS------------------------------SRTGVRQR 45 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHTTC--------C-HHHHH------------------------------HHHCCCEE
T ss_pred eeEEEEEEEECCCcEecHHHHHHHhCC--------C-HHHHH------------------------------HhhCceEE
Confidence 47899999999985 567888876521 1 11211 01122222
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCcc
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVM 789 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs~ 789 (1152)
.....++..+++++++++||+|||+ ++++ +|++|+...++. .+ ..+.++++.||++ +|++
T Consensus 46 ~~~~~~~~~~la~~Aa~~al~~ag~--~~id----~vi~~t~~~~~~--------~p-----~~a~~v~~~lgl~~~~~~ 106 (331)
T 2x3e_A 46 HIAGDLGSGDLALRAASAALASAGL--ERVD----AVVLATSTGDFC--------CP-----ATAPRVAARLGLVGALAF 106 (331)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHTC--SCCS----EEEEECSSCSEE--------ES-----CSHHHHHHHTTCTTSEEE
T ss_pred EecCCCCHHHHHHHHHHHHHHhCCc--ccCC----EEEEEeCCCCCC--------CC-----hHHHHHHHHhCCCCCcEE
Confidence 2222277899999999999999998 5554 688887654321 11 2578999999998 8999
Q ss_pred cccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcc
Q psy616 790 AINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKR 869 (1152)
Q Consensus 790 tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~ 869 (1152)
+|+++|+|++.||+.|++.|++|++|.+||+|++.+ ++. +. |++..+|+++|||++++||++
T Consensus 107 ~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~----------~~-------~~d~~~~~~~GdGA~A~vL~~ 168 (331)
T 2x3e_A 107 DLSAAATGFVYGLASVGSLISAGLADSALLVGVDTF-SHT----------LD-------PADRSTRALFGDGAGAVVLRA 168 (331)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGG----------SC-------TTCHHHHHHBCCEEEEEEEEE
T ss_pred EEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeecc-ccC----------CC-------ccccccceeeccccEEEEEEe
Confidence 999999999999999999999999999999999973 332 11 223457999999999999998
Q ss_pred cchhhcCCCceEEEEEEEEEecCCCCC-CCCCC------------------CH--------HHHHHHHHHHHHHcCCCCC
Q psy616 870 LSRALSDGDPIHAIIRGSGINYDGKTN-GITAP------------------NG--------ISQTELIKSVYKKSNLNPE 922 (1152)
Q Consensus 870 l~~A~~dgd~i~avI~g~a~~~dG~~~-~~~~P------------------~~--------~~q~~~i~~al~~Agi~p~ 922 (1152)
.++| ++++|++. ..++||... .++.| ++ ..+.++++++|+++|++|+
T Consensus 169 ~~~a--~~~~i~~~----~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~ 242 (331)
T 2x3e_A 169 GDAE--EEGALLAF----DLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQAS 242 (331)
T ss_dssp ECTT--STTBEEEE----EEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred cCCC--CCCceEEE----EEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 8766 45666644 455566422 23333 22 5788999999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCC
Q psy616 923 DINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKEN 1002 (1152)
Q Consensus 923 dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~n 1002 (1152)
||+||.+|+++|+..|. +.+.|+-... + ++. .++++||+.+|+....|..+ ++.+.+.
T Consensus 243 did~~~~H~~~~~~~d~-----~~~~lg~~~~--~-~~~--~~~~~Gnt~sAs~~~~L~~~---~~~~~~~--------- 300 (331)
T 2x3e_A 243 DLHHLVPHQANTRILAA-----VADQLDLPVE--R-VVS--NIAEVGNTVAASIPLALAHG---LRQGILR--------- 300 (331)
T ss_dssp GCSEEEECCCCHHHHHH-----HHHHHTCCGG--G-BCC--CHHHHCBCGGGHHHHHHHHH---HHTTCSC---------
T ss_pred HCCEEEEcCCCHHHHHH-----HHHHcCCCHH--H-Hhh--hHhhhCcHHHHHHHHHHHHH---HHhCCCC---------
Confidence 99999999999998775 4556653221 1 222 35799999999988877654 3333221
Q ss_pred cccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1003 NYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1003 p~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+-.+.++.+||.|.+.+.++|+-
T Consensus 301 ------------------------~G~~vll~~~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 301 ------------------------DGGNMVLTGFGAGLTWGSVALRW 323 (331)
T ss_dssp ------------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred ------------------------CCCEEEEEEEeHHhhheeeEEEE
Confidence 11356799999999999999963
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.4e-24 Score=234.83 Aligned_cols=233 Identities=17% Similarity=0.136 Sum_probs=181.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+. ..++..++++.. +.++.++.||++|+++++++++++.+++
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAK-LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5799999999999999999999999985 55556653 344555566554 6789999999999999999999999999
Q ss_pred CCeeEEEEcccccCcC-cccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 312 GPIDGVLHIAGISGLT-SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~-~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
|++|+||||||+.. . .++.+.+.++|++++++|+.|++++.++++|.|++. ..++||++||+++..+.+++..|+
T Consensus 91 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~ 166 (267)
T 1iy8_A 91 GRIDGFFNNAGIEG-KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ---GSGMVVNTASVGGIRGIGNQSGYA 166 (267)
T ss_dssp SCCSEEEECCCCCC-CCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSBCSSBHHHH
T ss_pred CCCCEEEECCCcCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCCEEEEEcchhhccCCCCCccHH
Confidence 99999999999876 5 678899999999999999999999999999998754 346899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-----cccch----hHHhhcCC-CCCCHHHHHHHHHH
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----NEQTD----FYFKSSKQ-KVLHENDGLKLFEQ 460 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----~~~~~----~~~~~~g~-~~l~~~e~~~~l~~ 460 (1152)
++|+++++|++.++.+.. ..++++.+|.+|... +.|.... ..... .......+ +..+++|..+++..
T Consensus 167 asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~ 243 (267)
T 1iy8_A 167 AAKHGVVGLTRNSAVEYG--RYGIRINAIAPGAIW-TPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAF 243 (267)
T ss_dssp HHHHHHHHHHHHHHHHHG--GGTCEEEEEEECSBC-SHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH--hcCeEEEEEEeCCCc-CcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 999999999999887643 335688899888664 4442210 11111 11111111 34589999999988
Q ss_pred HHhcC----ceeeeeechh
Q psy616 461 LLIQD----KIQYLVLSGE 475 (1152)
Q Consensus 461 ~l~~~----~~~~~v~~~~ 475 (1152)
++... ..+.+.+++.
T Consensus 244 l~s~~~~~~tG~~i~vdGG 262 (267)
T 1iy8_A 244 LLSDDASYVNATVVPIDGG 262 (267)
T ss_dssp HTSGGGTTCCSCEEEESTT
T ss_pred HcCccccCCCCCEEEECCC
Confidence 77543 2344545443
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-24 Score=235.28 Aligned_cols=220 Identities=15% Similarity=0.104 Sum_probs=175.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+.. ..+++ ...++.++++|++|.++++++++++.+++|++
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~---~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 88 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHP-LLLLARRVE---RLKAL--NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPA 88 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHH---HHHTT--CCTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHh--hcCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4789999999999999999999999985 455556531 11111 12368899999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.+++..|+++|+
T Consensus 89 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---~~g~IV~isS~~~~~~~~~~~~Y~asK~ 164 (266)
T 3p19_A 89 DAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR---NCGTIINISSIAGKKTFPDHAAYCGTKF 164 (266)
T ss_dssp EEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEEcChhhCCCCCCCchHHHHHH
Confidence 99999999987 7788999999999999999999999999999998764 3467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHh--h-cCCCCCCHHHHHHHHHHHHhcCce
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFK--S-SKQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~--~-~g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
++++|++.++.+.. ..++++.+|.+|.... .|....... ...... . .--+..+++|..+++..++..+..
T Consensus 165 a~~~~~~~la~e~~--~~gi~vn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 165 AVHAISENVREEVA--ASNVRVMTIAPSAVKT-ELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECSBSS-SGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEeeCcccc-chhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCC
Confidence 99999999988743 3456888998887653 443221111 011111 0 112357899999999999887654
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-25 Score=258.01 Aligned_cols=295 Identities=14% Similarity=0.152 Sum_probs=206.9
Q ss_pred CcEEEEeeeeccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 631 ELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
..+.|+|+++.+|.. .+.++||+.+.. + ++|- ..++||..
T Consensus 11 ~~~~I~g~g~~~P~~~~~~~~~~~~~~~--------~-~~~i------------------------------~~~~gi~~ 51 (335)
T 1u6e_A 11 RSVGLLSVGAYRPERVVTNDEICQHIDS--------S-DEWI------------------------------YTRTGIKT 51 (335)
T ss_dssp SCEEEEEEEEECCSEEEEHHHHTTSSSC--------C-HHHH------------------------------HHHHCCSE
T ss_pred CceEEEEEEEECCCceecHHHHHHHhCC--------C-HHHH------------------------------HHhcCCce
Confidence 468999999999985 567888764311 1 1121 01233333
Q ss_pred HHhh-cCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CC
Q psy616 710 LEAE-RMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GP 787 (1152)
Q Consensus 710 ~ea~-~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GP 787 (1152)
+... ..++..+++++++++||+|||+++++++ +|++|+..+++.. ...++++++.||++ +|
T Consensus 52 r~~~~~~~~~~~la~~A~~~al~~ag~~~~~id----~vi~~t~~~~~~~-------------~~~a~~v~~~lgl~~~~ 114 (335)
T 1u6e_A 52 RRFAADDESAASMATEACRRALSNAGLSAADID----GVIVTTNTHFLQT-------------PPAAPMVAASLGAKGIL 114 (335)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCSS-------------SCHHHHHHHHHTCTTSE
T ss_pred EeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCCC-------------ChHHHHHHHHhCCCCCc
Confidence 3322 2467899999999999999999988876 8999976553311 13688999999998 69
Q ss_pred cccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEE
Q psy616 788 VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVL 867 (1152)
Q Consensus 788 s~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvL 867 (1152)
+++|+++|+|++.||++|++.|++|++|.+||+|++.+.. .+++|| ..+|+++|||++++||
T Consensus 115 ~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~-----------------~~~~~d-~~~~~~~gDGA~A~vl 176 (335)
T 1u6e_A 115 GFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSP-----------------TIDMYD-RGNCFIFADGAAAVVV 176 (335)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG-----------------GCCTTC-TTTTTTBCEEEEEEEE
T ss_pred EeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc-----------------ccCccc-cccceEeccccEEEEE
Confidence 9999999999999999999999999999999999998531 134555 3589999999999999
Q ss_pred cccchhhcCCCceEEEEEEEE-EecCCCC------------C---CCCCCC--------HHHHHHHHHHHHHHcCCCCCC
Q psy616 868 KRLSRALSDGDPIHAIIRGSG-INYDGKT------------N---GITAPN--------GISQTELIKSVYKKSNLNPED 923 (1152)
Q Consensus 868 k~l~~A~~dgd~i~avI~g~a-~~~dG~~------------~---~~~~P~--------~~~q~~~i~~al~~Agi~p~d 923 (1152)
++.++ + .|++++.++. ..++... . .....+ ...+.++++++|+++|++|+|
T Consensus 177 ~~~~~---~--~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~d 251 (335)
T 1u6e_A 177 GETPF---Q--GIGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQ 251 (335)
T ss_dssp EECSS---C--CBCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred EecCC---C--CeeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 98764 2 2555554432 1111000 0 000112 347889999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCc
Q psy616 924 INYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENN 1003 (1152)
Q Consensus 924 I~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np 1003 (1152)
|+||++|+++|+..|. +.+.|+-... ..+. ..++++||+.+|+....|... ++.+.+
T Consensus 252 Id~~~~H~~~~~~~~~-----~~~~lg~~~~--~~~~--~~~~~~Gnt~sAs~~~~L~~~---~~~~~~----------- 308 (335)
T 1u6e_A 252 IDVFVPHQANSRINEL-----LVKNLQLRPD--AVVA--NDIEHTGNTSAASIPLAMAEL---LTTGAA----------- 308 (335)
T ss_dssp CCEEEECCSCHHHHHH-----HHHHHTCCTT--CEEC--CTHHHHCBCGGGHHHHHHHHH---HHHTSS-----------
T ss_pred CCEEEECCCCHHHHHH-----HHHHcCCCch--hhhh--hhhhhhCcHHHHHHHHHHHHH---HHcCCC-----------
Confidence 9999999999998776 4455653221 1222 246889999999865433221 122110
Q ss_pred ccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1004 YIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1004 ~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
.+..++++++||+|++++.++|+-
T Consensus 309 ----------------------~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 309 ----------------------KPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp ----------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred ----------------------CCCCEEEEEEEehhheeEEEEEEe
Confidence 012467899999999999999973
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=232.86 Aligned_cols=223 Identities=13% Similarity=0.081 Sum_probs=178.0
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||+||||+++|+.|+++|++ |++++|+. ..++..++++..+.++.++.+|++|+++++++++++.+++|++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFA-VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999984 55556653 3455666777777889999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++.. ..+.||++||.++..+.++...|+++|+
T Consensus 81 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asK~ 157 (256)
T 1geg_A 81 DVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEG--HGGKIINACSQAGHVGNPELAVYSSSKF 157 (256)
T ss_dssp CEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--SCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCCEEEEECchhhcCCCCCchhHHHHHH
Confidence 99999999877 67888999999999999999999999999999987542 1467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhhcC-CCCCCHHHHHHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSK-QKVLHENDGLKLFEQL 461 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g-~~~l~~~e~~~~l~~~ 461 (1152)
+++.|++.++.+.. ..++++.+|.+|... +.|.... ........+... -+..+|+|..+++..+
T Consensus 158 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l 234 (256)
T 1geg_A 158 AVRGLTQTAARDLA--PLGITVNGYCPGIVK-TPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 234 (256)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBS-SHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HcCeEEEEEEECCCc-cchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999887643 335688899888664 3332111 000011111111 1356899999999888
Q ss_pred HhcC
Q psy616 462 LIQD 465 (1152)
Q Consensus 462 l~~~ 465 (1152)
+...
T Consensus 235 ~s~~ 238 (256)
T 1geg_A 235 ASPD 238 (256)
T ss_dssp HSGG
T ss_pred hCcc
Confidence 7543
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.4e-24 Score=232.80 Aligned_cols=228 Identities=19% Similarity=0.163 Sum_probs=180.8
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCC-CcEEEEEecC--CCHHHHHHHHHHHHh
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFN-NKAIYIQVDV--SDKLKMISEINSIIN 309 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g-~~v~~~~~Dv--sd~~~v~~~~~~~~~ 309 (1152)
-+++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++..+ .++.++.+|+ +|.++++++++++.+
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGAT-VILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999985 5666666 34455566665543 4788999999 999999999999999
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
++|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++ ...+.||++||+++..+.+++..|
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~~~Y 165 (252)
T 3f1l_A 89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLK---SDAGSLVFTSSSVGRQGRANWGAY 165 (252)
T ss_dssp HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT---SSSCEEEEECCGGGTSCCTTCHHH
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHH---CCCCEEEEECChhhccCCCCCchh
Confidence 99999999999998643568889999999999999999999999999999864 345789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc---
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK--- 466 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~--- 466 (1152)
+++|+++++|++.++.+.. .. +++.+|.+|... +.|....... .......+|+|....+..++....
T Consensus 166 ~asK~a~~~l~~~la~e~~--~~-irvn~v~PG~v~-t~~~~~~~~~------~~~~~~~~p~dva~~~~~L~s~~~~~i 235 (252)
T 3f1l_A 166 AASKFATEGMMQVLADEYQ--QR-LRVNCINPGGTR-TAMRASAFPT------EDPQKLKTPADIMPLYLWLMGDDSRRK 235 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTT--TT-CEEEEEECCSBS-SHHHHHHCTT------CCGGGSBCTGGGHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHHhc--CC-cEEEEEecCccc-CchhhhhCCc------cchhccCCHHHHHHHHHHHcCccccCC
Confidence 9999999999999988753 22 788899887664 3442111000 001124678999998888776432
Q ss_pred -eeeeeechh
Q psy616 467 -IQYLVLSGE 475 (1152)
Q Consensus 467 -~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 236 tG~~i~vdgG 245 (252)
T 3f1l_A 236 TGMTFDAQPG 245 (252)
T ss_dssp CSCEEESSCC
T ss_pred CCCEEEeCCC
Confidence 244555443
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-23 Score=233.10 Aligned_cols=234 Identities=12% Similarity=0.078 Sum_probs=182.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-C
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-G 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-G 312 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+. ..++..++++..+.++.++.+|++|+++++++++++.+.+ |
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGAR-VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999985 56666663 3455666777778889999999999999999999999999 9
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.+++..|+++
T Consensus 99 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~as 174 (273)
T 1ae1_A 99 KLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS---QNGNVIFLSSIAGFSALPSVSLYSAS 174 (273)
T ss_dssp CCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEcCHhhcCCCCCcchhHHH
Confidence 9999999999977 6788899999999999999999999999999998754 34679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-------cchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-------QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-------~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
|++++.|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..+|+|..+++..++..
T Consensus 175 K~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~ 251 (273)
T 1ae1_A 175 KGAINQMTKSLACEWA--KDNIRVNSVAPGVIL-TPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFP 251 (273)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC--------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHh--hcCcEEEEEEeCCCc-CchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999887643 335688899888664 444321100 01111122222 356899999999888754
Q ss_pred C----ceeeeeechhh
Q psy616 465 D----KIQYLVLSGEL 476 (1152)
Q Consensus 465 ~----~~~~~v~~~~~ 476 (1152)
. ..+.+.+++.+
T Consensus 252 ~~~~~tG~~i~vdGG~ 267 (273)
T 1ae1_A 252 AASYITGQIIWADGGF 267 (273)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred cccCcCCCEEEECCCc
Confidence 3 23555555543
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=244.00 Aligned_cols=235 Identities=13% Similarity=0.117 Sum_probs=186.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-----------cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-----------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISE 303 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-----------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~ 303 (1152)
.++++|||||++|||+++|+.|+++|+++ +++.|+ +..++..++++..+.++.++.||++|.++++++
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~V-v~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARV-VVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEE-EEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE-EEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 58999999999999999999999999854 454443 445667778888888999999999999999999
Q ss_pred HHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCC---CCCEEEEecCCccc
Q psy616 304 INSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN---KLDFVCYFSSSSAI 380 (1152)
Q Consensus 304 ~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~---~~~~iV~~SS~a~~ 380 (1152)
++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++.... ..++||++||+++.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~ 183 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL 183 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence 9999999999999999999987 7789999999999999999999999999999998764421 23689999999999
Q ss_pred cCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHH
Q psy616 381 LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQ 460 (1152)
Q Consensus 381 ~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~ 460 (1152)
.+.++++.|+++|+++++|++.++.+.. ..++++.+|.+| + .+.|........ ..........++++|...++..
T Consensus 184 ~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~vn~v~PG-~-~t~~~~~~~~~~-~~~~~~~~~~~~pedva~~v~~ 258 (322)
T 3qlj_A 184 QGSVGQGNYSAAKAGIATLTLVGAAEMG--RYGVTVNAIAPS-A-RTRMTETVFAEM-MATQDQDFDAMAPENVSPLVVW 258 (322)
T ss_dssp HCBTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEEC-T-TSCCSCCSCCC---------CCTTCGGGTHHHHHH
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHhc--ccCcEEEEecCC-C-CCccchhhhhhh-hhccccccCCCCHHHHHHHHHH
Confidence 9999999999999999999999887743 345688899988 4 344533221111 0011122345789999999888
Q ss_pred HHhcCc----eeeeeechhh
Q psy616 461 LLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 461 ~l~~~~----~~~~v~~~~~ 476 (1152)
++.... .+.+.+++.+
T Consensus 259 L~s~~~~~itG~~i~vdGG~ 278 (322)
T 3qlj_A 259 LGSAEARDVTGKVFEVEGGK 278 (322)
T ss_dssp HTSGGGGGCCSCEEEEETTE
T ss_pred HhCccccCCCCCEEEECCCc
Confidence 775432 3555555543
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=232.32 Aligned_cols=233 Identities=13% Similarity=0.097 Sum_probs=180.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-c-hHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-L-NSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~-~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||+||||+++|+.|+++|++ |+++.|+. . .++..++++.. +.++.++.+|++|+++++++++++.+++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGAD-IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999985 55556654 3 45555666554 6789999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.+++..|++
T Consensus 82 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~ 157 (260)
T 1x1t_A 82 GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ---GFGRIINIASAHGLVASANKSAYVA 157 (260)
T ss_dssp SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEECcHHhCcCCCCCchHHH
Confidence 99999999999877 6788899999999999999999999999999998754 2467999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-----------c-chhH-HhhcC-CCCCCHHHHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-----------Q-TDFY-FKSSK-QKVLHENDGLKL 457 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-----------~-~~~~-~~~~g-~~~l~~~e~~~~ 457 (1152)
+|++++.|++.++.+.. ..++++.+|.+|... +.|...... . .... ..... .+..+|+|..+.
T Consensus 158 sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~ 234 (260)
T 1x1t_A 158 AKHGVVGFTKVTALETA--GQGITANAICPGWVR-TPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT 234 (260)
T ss_dssp HHHHHHHHHHHHHHHHT--TTTEEEEEEEECCBC-C------------------------CHHHHCTTCCCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--cCCEEEEEEeecCcc-CchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHH
Confidence 99999999999887643 345688899887664 444321100 0 0001 11111 235689999999
Q ss_pred HHHHHhcC----ceeeeeechh
Q psy616 458 FEQLLIQD----KIQYLVLSGE 475 (1152)
Q Consensus 458 l~~~l~~~----~~~~~v~~~~ 475 (1152)
+..++... ..+.+.+++.
T Consensus 235 ~~~l~s~~~~~~tG~~~~vdgG 256 (260)
T 1x1t_A 235 AVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhChhhcCCCCCEEEECCC
Confidence 98887543 1345555544
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-23 Score=232.32 Aligned_cols=224 Identities=11% Similarity=0.135 Sum_probs=176.7
Q ss_pred CCCEEEEECCch-hHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCC-CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTG-RLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFN-NKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~g-GIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g-~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||+| |||+++|++|+++|++ |++++|+ +..++..+++++.+ .++.+++||++|.++++++++++.+++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 689999999985 9999999999999985 5555665 44566667776554 689999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ...++||++||.++..+.+++..|++
T Consensus 100 g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~ 176 (266)
T 3o38_A 100 GRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGV--DHGGVIVNNASVLGWRAQHSQSHYAA 176 (266)
T ss_dssp SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS--SCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred CCCcEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCeEEEEeCCHHHcCCCCCCchHHH
Confidence 99999999999987 7888999999999999999999999999999998643 24568999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc--cchhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+|++++.|++.++.+.. ..++++.+|.+|... +.|...... .......... -+..+++|..+.+..++...
T Consensus 177 sKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~ 250 (266)
T 3o38_A 177 AKAGVMALTRCSAIEAV--EFGVRINAVSPSIAR-HKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDY 250 (266)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-C-----------------CCTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHH--HcCcEEEEEeCCccc-chhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence 99999999999887743 345688888887664 444322111 1111111111 23568999999998887643
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=233.25 Aligned_cols=233 Identities=18% Similarity=0.189 Sum_probs=181.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l-~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+. ..++..+++ +..+.++.++.||++|+++++++++++.+++|
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCS-VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 98 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999985 55566663 334455555 44577899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc-cccCCCCChhhhH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS-AILGDFGSCDYAM 391 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a-~~~g~~g~~~Yaa 391 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ ...+.||++||++ +..+.++...|++
T Consensus 99 ~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~~~~Y~a 174 (267)
T 1vl8_A 99 KLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRE---SDNPSIINIGSLTVEEVTMPNISAYAA 174 (267)
T ss_dssp CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---CSSCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred CCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCcEEEEECCcchhccCCCCChhHHH
Confidence 9999999999987 678889999999999999999999999999999753 3457899999999 8889999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC--
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD-- 465 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~-- 465 (1152)
+|+++++|++.++.+.. ..++++.+|.+|.+. +.|..... ...........+ +..++++..+++..++...
T Consensus 175 sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~ 251 (267)
T 1vl8_A 175 SKGGVASLTKALAKEWG--RYGIRVNVIAPGWYR-TKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAK 251 (267)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-STTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHhc--ccCeEEEEEEeccCc-cccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 99999999999887643 335688889887664 44432110 001111111111 3578999999988887543
Q ss_pred --ceeeeeechh
Q psy616 466 --KIQYLVLSGE 475 (1152)
Q Consensus 466 --~~~~~v~~~~ 475 (1152)
..+.+.+++.
T Consensus 252 ~itG~~i~vdGG 263 (267)
T 1vl8_A 252 YVTGQIIFVDGG 263 (267)
T ss_dssp TCCSCEEEESTT
T ss_pred CCcCCeEEECCC
Confidence 2345555554
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.9e-24 Score=236.67 Aligned_cols=231 Identities=13% Similarity=0.156 Sum_probs=180.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|+ +|++++|+. ..++..+++ +.++.++++|++|+++++++++++.+++|+
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 589999999999999999999999998 555566653 333333333 678899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.++++.|+++|
T Consensus 104 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~g~Iv~isS~~~~~~~~~~~~Y~asK 179 (277)
T 3gvc_A 104 VDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER---GGGAIVNLSSLAGQVAVGGTGAYGMSK 179 (277)
T ss_dssp CCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEEcchhhccCCCCchhHHHHH
Confidence 999999999987 7788999999999999999999999999999998653 356899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc----c-----chhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----Q-----TDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~-----~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|...... . .........-+..+|+|..+++..++..
T Consensus 180 aa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~ 256 (277)
T 3gvc_A 180 AGIIQLSRITAAELR--SSGIRSNTLLPAFVD-TPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSD 256 (277)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEeeCCcc-CchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCC
Confidence 999999999887643 345688888887664 333211000 0 0000011112357899999999988864
Q ss_pred Cc----eeeeeechhh
Q psy616 465 DK----IQYLVLSGEL 476 (1152)
Q Consensus 465 ~~----~~~~v~~~~~ 476 (1152)
.. .+.+.+++.+
T Consensus 257 ~a~~itG~~i~vdGG~ 272 (277)
T 3gvc_A 257 DASMITGTTQIADGGT 272 (277)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred ccCCccCcEEEECCcc
Confidence 32 3556565543
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.2e-24 Score=235.90 Aligned_cols=223 Identities=13% Similarity=0.053 Sum_probs=179.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||++|||+++|+.|+++|++++++..+.+..++..++++..+.++.++++|++|.++++++++++.+. |++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~i 110 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-APV 110 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CCC
Confidence 5799999999999999999999999985544444445667777888888899999999999999999999999887 999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.++...|+++|+
T Consensus 111 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~g~Iv~isS~~~~~~~~~~~~Y~asKa 186 (275)
T 4imr_A 111 DILVINASAQI-NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR---KWGRVVSIGSINQLRPKSVVTAYAATKA 186 (275)
T ss_dssp CEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEECCHHhCCCCCCchhhHHHHH
Confidence 99999999987 7789999999999999999999999999999998754 3467999999999999899999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc----ccchhHHhhc-C-CCCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN----EQTDFYFKSS-K-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~----~~~~~~~~~~-g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++|++.++.+.. ..++++.+|.+|... +.|..... .......... . -+..+|+|..+++..++...
T Consensus 187 a~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~ 260 (275)
T 4imr_A 187 AQHNLIQSQARDFA--GDNVLLNTLAPGLVD-TDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEA 260 (275)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEESSBC-SHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEEecccc-CcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcc
Confidence 99999999887743 345688899888765 34422111 1111111111 1 23457899998888877543
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=233.78 Aligned_cols=231 Identities=12% Similarity=0.133 Sum_probs=179.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+. ..++..+ ..+.++.++++|++|+++++++++++.+++|+
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAY-VVVADVNEDAAVRVAN---EIGSKAFGVRVDVSSAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHH---HHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999985 55556653 2233333 34778999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ ...+.||++||+++..+.+++..|+++|
T Consensus 102 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~asK 177 (277)
T 4dqx_A 102 VDVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRR---NGGGSIINTTSYTATSAIADRTAYVASK 177 (277)
T ss_dssp CCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---TTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCcEEEEECchhhCcCCCCChhHHHHH
Confidence 999999999987 778899999999999999999999999999999753 3457899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc----cccchh---HHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN----NEQTDF---YFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~----~~~~~~---~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|.... ...... ......+ +..+|+|..+++..++...
T Consensus 178 aa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~ 254 (277)
T 4dqx_A 178 GAISSLTRAMAMDHA--KEGIRVNAVAPGTID-SPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDR 254 (277)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEeeCcCc-CchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCc
Confidence 999999999887743 335688888887664 3441110 000011 1111111 3458999999999887644
Q ss_pred c----eeeeeechhh
Q psy616 466 K----IQYLVLSGEL 476 (1152)
Q Consensus 466 ~----~~~~v~~~~~ 476 (1152)
. .+.+.+++.+
T Consensus 255 ~~~itG~~i~vdGG~ 269 (277)
T 4dqx_A 255 SRFATGSILTVDGGS 269 (277)
T ss_dssp GTTCCSCEEEESSSS
T ss_pred cCCCcCCEEEECCch
Confidence 2 3555555543
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=230.74 Aligned_cols=220 Identities=15% Similarity=0.136 Sum_probs=170.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||+||||+++|+.|+++|+ +|++++|+. ..++..+++ +.++.++.+|++|+++++++++++.+++|++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 5799999999999999999999997 456666663 223333333 45789999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++. ..++||++||+++..+.+++..|+++|++
T Consensus 77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~asKaa 153 (248)
T 3asu_A 77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER---NHGHIINIGSTAGSWPYAGGNVYGATKAF 153 (248)
T ss_dssp EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCceEEEEccchhccCCCCCchHHHHHHH
Confidence 999999986324678899999999999999999999999999998754 34689999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-cccchhHHh-hcCCCCCCHHHHHHHHHHHHhcC
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFYFK-SSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~~~-~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++|++.++.+.. ..++++.+|.+|...++.|.... ........+ .....+++|+|..+.+..++..+
T Consensus 154 ~~~~~~~la~e~~--~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~ 223 (248)
T 3asu_A 154 VRQFSLNLRTDLH--GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLP 223 (248)
T ss_dssp HHHHHHHHHHHTT--TSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhh--hcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCC
Confidence 9999999887643 34678899998877635553211 000000000 01234689999999999888754
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-23 Score=228.68 Aligned_cols=218 Identities=17% Similarity=0.216 Sum_probs=172.4
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCC-cEEEEecCCcch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~~-~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++|||||++|||+++|+.|+++|+ .+|++.+|+... +++.++ .+.++.++++|++|+++++++++++.+++|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEK---YGDRFFYVVGDITEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHH---HGGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHH---hCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999974 577777777432 233332 3678999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++.. +.||++||.++..+.++++.|+++|
T Consensus 79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~----g~iv~isS~~~~~~~~~~~~Y~asK 154 (254)
T 3kzv_A 79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN----GNVVFVSSDACNMYFSSWGAYGSSK 154 (254)
T ss_dssp CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEECCSCCCCSSCCSHHHHHHH
T ss_pred ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CeEEEEcCchhccCCCCcchHHHHH
Confidence 999999999865347888999999999999999999999999999987632 6899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc----------cchhHHhhc-CCCCCCHHHHHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----------QTDFYFKSS-KQKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----------~~~~~~~~~-g~~~l~~~e~~~~l~~~l 462 (1152)
+++.+|++.++.+. .++++.+|.+|... +.|...... ......... .-+..+|+|..+++..++
T Consensus 155 ~a~~~~~~~la~e~----~~i~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~ 229 (254)
T 3kzv_A 155 AALNHFAMTLANEE----RQVKAIAVAPGIVD-TDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLA 229 (254)
T ss_dssp HHHHHHHHHHHHHC----TTSEEEEEECSSCC-CCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc----cCcEEEEEeCCccc-chhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHH
Confidence 99999999998874 35788899887664 445332110 011111111 123567889988888887
Q ss_pred hcC
Q psy616 463 IQD 465 (1152)
Q Consensus 463 ~~~ 465 (1152)
...
T Consensus 230 s~~ 232 (254)
T 3kzv_A 230 LHG 232 (254)
T ss_dssp HHC
T ss_pred hhc
Confidence 654
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=233.97 Aligned_cols=241 Identities=13% Similarity=0.064 Sum_probs=180.2
Q ss_pred EEEEeEeEecccccccCccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc--hHHHHHHHHhCCCcEEEEE
Q psy616 214 IRYQLNIKSIILKDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--NSIIYKKLKKFNNKAIYIQ 291 (1152)
Q Consensus 214 ~r~~~~~~~~~~~~~~~~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~--~~~~~~~l~~~g~~v~~~~ 291 (1152)
.||...+.+.+.+..+...--+++++|||||+||||+++|+.|+++|++ |+++.|+.. .++..++++..+.++.++.
T Consensus 7 ~r~~~~~~~~~~~~~~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 85 (283)
T 1g0o_A 7 PRGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCK-VIVNYANSTESAEEVVAAIKKNGSDAACVK 85 (283)
T ss_dssp -----CTTCCCSCSSGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CccccccCCCCCCCCCcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCchHHHHHHHHHHHHhCCCeEEEE
Confidence 3555555554433322111125799999999999999999999999985 444555432 3455667777788899999
Q ss_pred ecCCCHHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEE
Q psy616 292 VDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFV 371 (1152)
Q Consensus 292 ~Dvsd~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~i 371 (1152)
+|++|.++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.| + ..+.|
T Consensus 86 ~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~--~~g~i 159 (283)
T 1g0o_A 86 ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL---E--IGGRL 159 (283)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS---C--TTCEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH---h--cCCeE
Confidence 9999999999999999999999999999999987 6788899999999999999999999999999986 1 34789
Q ss_pred EEecCCccccCCCC-ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccch
Q psy616 372 CYFSSSSAILGDFG-SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTD 438 (1152)
Q Consensus 372 V~~SS~a~~~g~~g-~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~ 438 (1152)
|++||+++..+.++ +..|+++|++++.|++.++.+.. ..++++.+|.+|.... .|.... .....
T Consensus 160 v~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~t-~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T 1g0o_A 160 ILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA--DKKITVNVVAPGGIKT-DMYHAVCREYIPNGENLSNEEVD 236 (283)
T ss_dssp EEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBSS-HHHHHHGGGGSTTCTTCCHHHHH
T ss_pred EEEechhhccCCCCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEEEEecCcccc-hhhhhhhhhccccccccCHHHHH
Confidence 99999999988764 99999999999999999887643 3356888998887643 332110 00001
Q ss_pred hHHh--hcCC-CCCCHHHHHHHHHHHHhc
Q psy616 439 FYFK--SSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 439 ~~~~--~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
.... ...+ +..+|+|..+++..++..
T Consensus 237 ~~~~~~~~p~~r~~~p~dvA~~v~~l~s~ 265 (283)
T 1g0o_A 237 EYAAVQWSPLRRVGLPIDIARVVCFLASN 265 (283)
T ss_dssp HHHHHHSCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHhhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence 1111 1111 245889999998888764
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-23 Score=229.39 Aligned_cols=233 Identities=14% Similarity=0.114 Sum_probs=183.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-C
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-G 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-G 312 (1152)
.++++|||||+||||+++|+.|+++|++ |+++.|+. ..++..++++..+.++.++.+|++|+++++++++++.+++ |
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGAS-VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999985 55556653 3455666777778889999999999999999999999999 8
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++. ..+.||++||.++..+.+++..|+++
T Consensus 87 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~s 162 (260)
T 2ae2_A 87 KLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS---ERGNVVFISSVSGALAVPYEAVYGAT 162 (260)
T ss_dssp CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---SSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEcchhhccCCCCcchHHHH
Confidence 9999999999887 6788899999999999999999999999999998653 34689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccch---hHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTD---FYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~---~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|++++.|++.++.+.. ..++++.+|.+|... +.|.... ..... ....... -+..+++|..+.+..++...
T Consensus 163 K~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~ 239 (260)
T 2ae2_A 163 KGAMDQLTRCLAFEWA--KDNIRVNGVGPGVIA-TSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA 239 (260)
T ss_dssp HHHHHHHHHHHHHHTG--GGTEEEEEEEECSBC-SHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHh--hcCcEEEEEecCCCC-CcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 9999999999887643 335688888887664 3332110 00001 1111111 13568999999988877543
Q ss_pred ----ceeeeeechh
Q psy616 466 ----KIQYLVLSGE 475 (1152)
Q Consensus 466 ----~~~~~v~~~~ 475 (1152)
..+.+.+++.
T Consensus 240 ~~~~tG~~~~vdgG 253 (260)
T 2ae2_A 240 ASYVTGQIIYVDGG 253 (260)
T ss_dssp GTTCCSCEEEESTT
T ss_pred ccCCCCCEEEECCC
Confidence 2345555554
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=231.44 Aligned_cols=229 Identities=16% Similarity=0.152 Sum_probs=179.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|+.|+++|+ +|++++|++ ..+++.++ .+.++.++++|++|+++++++++++.+++|+
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREE---FGPRVHALRSDIADLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH---HGGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---hCCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 579999999999999999999999998 566666664 22333333 3678999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++ .+.||++||+++..+.++++.|+++|
T Consensus 83 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~Y~asK 156 (255)
T 4eso_A 83 IDLLHINAGVSE-LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE-----GGSIVFTSSVADEGGHPGMSVYSASK 156 (255)
T ss_dssp EEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEECCGGGSSBCTTBHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-----CCEEEEECChhhcCCCCCchHHHHHH
Confidence 999999999987 788999999999999999999999999999987532 36899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--cc-cch----hHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NE-QTD----FYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~-~~~----~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++.+|++.++.+.. ..++++.+|.+|.+.. .|.... .. ... ....... -+..+|+|..+.+..++...
T Consensus 157 aa~~~~~~~la~e~~--~~gi~vn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 233 (255)
T 4eso_A 157 AALVSFASVLAAELL--PRGIRVNSVSPGFIDT-PTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFEA 233 (255)
T ss_dssp HHHHHHHHHHHHHTG--GGTCEEEEEEECSBCC-SSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHh--hhCcEEEEEecCcccC-cccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCcC
Confidence 999999999988754 3456888998887753 332210 11 000 0111111 23458999999998887642
Q ss_pred ---ceeeeeechhh
Q psy616 466 ---KIQYLVLSGEL 476 (1152)
Q Consensus 466 ---~~~~~v~~~~~ 476 (1152)
..+.+.+++.+
T Consensus 234 ~~itG~~i~vdGG~ 247 (255)
T 4eso_A 234 TFTTGAKLAVDGGL 247 (255)
T ss_dssp TTCCSCEEEESTTT
T ss_pred cCccCCEEEECCCc
Confidence 23556666554
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-24 Score=237.80 Aligned_cols=232 Identities=14% Similarity=0.102 Sum_probs=178.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~----~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.++++|||||++|||+++|+.|+++|++ |+++.|.. ..+++.++++..+.++.+++||++|+++++++++++.++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVN-LVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCE-EEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999985 44544432 234556677777889999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
+|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|+ +.+.||++||.++..+.++++.|+
T Consensus 89 ~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-----~~g~iv~isS~~~~~~~~~~~~Y~ 162 (262)
T 3ksu_A 89 FGKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN-----PNGHIITIATSLLAAYTGFYSTYA 162 (262)
T ss_dssp HCSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE-----EEEEEEEECCCHHHHHHCCCCC--
T ss_pred cCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-----CCCEEEEEechhhccCCCCCchhH
Confidence 999999999999987 78899999999999999999999999999999862 346899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc--cchhHHhh-cCCCCCCHHHHHHHHHHHHhcC--
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFKS-SKQKVLHENDGLKLFEQLLIQD-- 465 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~~-~g~~~l~~~e~~~~l~~~l~~~-- 465 (1152)
++|+++.+|++.++.+.. ..++++.+|.+|... +.|...... ........ ..-+..+|+|..+++..++...
T Consensus 163 asKaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~ 239 (262)
T 3ksu_A 163 GNKAPVEHYTRAASKELM--KQQISVNAIAPGPMD-TSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTDGWW 239 (262)
T ss_dssp ---CHHHHHHHHHHHHTT--TTTCEEEEEEECCCC-THHHHTCC------------CCCCSCCGGGTHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHH--HcCcEEEEEeeCCCc-CccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCCCCC
Confidence 999999999999988754 346788899888764 444322111 11111111 1123568999999998887642
Q ss_pred -ceeeeeechhh
Q psy616 466 -KIQYLVLSGEL 476 (1152)
Q Consensus 466 -~~~~~v~~~~~ 476 (1152)
..+.+.++|.+
T Consensus 240 itG~~i~vdGg~ 251 (262)
T 3ksu_A 240 INGQTIFANGGY 251 (262)
T ss_dssp CCSCEEEESTTC
T ss_pred ccCCEEEECCCc
Confidence 13566666654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=237.51 Aligned_cols=222 Identities=12% Similarity=0.082 Sum_probs=175.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||++|||+++|+.|+++|+++ +++.|+. ..+...+.++..+.++.++++|++|+++++++++++.+++|
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANI-AIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEE-EEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEE-EEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999999854 4445543 23445556677788999999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||+||||||+......+.+.+.++|++++++|+.|++++.++++|+|+ +.+.||++||+++..+.+++..|+++
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~Y~as 199 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLK-----QGDVIINTASIVAYEGNETLIDYSAT 199 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCC-----TTCEEEEECCTHHHHCCTTCHHHHHH
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-----hCCEEEEEechHhcCCCCCChhHHHH
Confidence 9999999999875356788999999999999999999999999998863 24689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-ccc-chhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|+++++|++.++.+.. ..++++.+|.+|.... .|.... ... ......... -+..+++|..+++..++...
T Consensus 200 Kaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~T-~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~ 272 (291)
T 3ijr_A 200 KGAIVAFTRSLSQSLV--QKGIRVNGVAPGPIWT-PLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSD 272 (291)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBCS-THHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHh--hcCEEEEEEeeCCCcC-CcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCc
Confidence 9999999999987754 3356888998887653 332111 110 011111111 23468999999988877543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-23 Score=229.39 Aligned_cols=232 Identities=13% Similarity=0.100 Sum_probs=183.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++|+.|+++|+ +|++++|+.. ++..++++..+.++.++.+|++|+++++++++++.+++|++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV 80 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999998 5666667655 55667777777889999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.+++..|+++|+
T Consensus 81 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 156 (255)
T 2q2v_A 81 DILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR---NWGRIINIASVHGLVGSTGKAAYVAAKH 156 (255)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEEcCchhccCCCCchhHHHHHH
Confidence 99999999876 6788899999999999999999999999999998653 3468999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccc--------hhH-HhhcC-CCCCCHHHHHHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQT--------DFY-FKSSK-QKVLHENDGLKLFEQL 461 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~--------~~~-~~~~g-~~~l~~~e~~~~l~~~ 461 (1152)
++.+|++.++.+.. ..++++.+|.+|.... .|..... ... ... ..... .+..+++|..+++..+
T Consensus 157 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l 233 (255)
T 2q2v_A 157 GVVGLTKVVGLETA--TSNVTCNAICPGWVLT-PLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFL 233 (255)
T ss_dssp HHHHHHHHHHHHTT--TSSEEEEEEEESSBCC-HHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc--ccCcEEEEEeeCCCcC-cchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence 99999999987743 3457888998887653 3321110 000 000 11111 1346899999998887
Q ss_pred HhcCc----eeeeeechh
Q psy616 462 LIQDK----IQYLVLSGE 475 (1152)
Q Consensus 462 l~~~~----~~~~v~~~~ 475 (1152)
+.... .+.+.+++.
T Consensus 234 ~s~~~~~~tG~~~~vdgG 251 (255)
T 2q2v_A 234 CSEAGSQVRGAAWNVDGG 251 (255)
T ss_dssp TSGGGTTCCSCEEEESTT
T ss_pred hCCccCCCCCCEEEECCC
Confidence 75432 344545444
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-23 Score=227.81 Aligned_cols=221 Identities=11% Similarity=0.065 Sum_probs=171.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||+||||+++|+.|+++|++ |++++|+.. +...+.++..+.++.++++|++|+++++++++++.+++|++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGAD-IAIADLVPA-PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC 83 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCC-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCch-hHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999985 555566541 12223566667889999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||.++..+.+++..|+++|+
T Consensus 84 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK~ 159 (249)
T 2ew8_A 84 DILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN---GWGRIINLTSTTYWLKIEAYTHYISTKA 159 (249)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCeEEEEEcchhhccCCCCchhHHHHHH
Confidence 99999999887 6788899999999999999999999999999998754 2467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccc-cccccchhHHhh--cC-CCCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI-GNNEQTDFYFKS--SK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~-~~~~~~~~~~~~--~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+.. ..++++.+|.+|... +.|.. ..........+. .. -+..+|+|..+.+..++..
T Consensus 160 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~ 230 (249)
T 2ew8_A 160 ANIGFTRALASDLG--KDGITVNAIAPSLVR-TATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASD 230 (249)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCC-------------------CTTSSSCSCCCTHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHH--hcCcEEEEEecCcCc-CccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHcCc
Confidence 99999999887643 335688899887664 34432 111000000110 11 1346899999999888754
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=232.40 Aligned_cols=187 Identities=16% Similarity=0.214 Sum_probs=161.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|++ |+++.|+ +..++..++++..+.++.+++||++|+++++++++++.+++|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTA-IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999985 5555665 3445566677777888999999999999999999999999999
Q ss_pred eeEEEEccccc-CcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 314 IDGVLHIAGIS-GLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~-~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+|+||||||+. . ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..+.||++||+++..+.+++..|+++
T Consensus 85 id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~as 160 (262)
T 1zem_A 85 IDFLFNNAGYQGA-FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ---NYGRIVNTASMAGVKGPPNMAAYGTS 160 (262)
T ss_dssp CCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred CCEEEECCCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEcchhhccCCCCCchHHHH
Confidence 99999999987 5 6788899999999999999999999999999998754 24679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF 429 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm 429 (1152)
|+++..|++.++.+.. ..++++.+|.+|.. ++.|
T Consensus 161 K~a~~~~~~~la~e~~--~~gi~vn~v~PG~v-~t~~ 194 (262)
T 1zem_A 161 KGAIIALTETAALDLA--PYNIRVNAISPGYM-GPGF 194 (262)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECSB-CSSH
T ss_pred HHHHHHHHHHHHHHHH--hhCeEEEEEecCCc-Ccch
Confidence 9999999999887643 34568889988765 4455
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-23 Score=226.54 Aligned_cols=223 Identities=16% Similarity=0.199 Sum_probs=179.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++++|||||+||||+++|++|+++|++++++..|+. ..++..++++..+.++.++.+|++|+++++++++++.+++|++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999987666567764 3345556676667889999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..++||++||.++..+.+++..|+++|+
T Consensus 81 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 156 (244)
T 1edo_A 81 DVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK---RKGRIINIASVVGLIGNIGQANYAAAKA 156 (244)
T ss_dssp SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred CEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc---CCCEEEEECChhhcCCCCCCccchhhHH
Confidence 99999999987 6788899999999999999999999999999998653 3468999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++.|++.++.+.. ..++++.+|.+|.+. +.|........ ........+ +...+++..+++..++.++
T Consensus 157 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 1edo_A 157 GVIGFSKTAAREGA--SRNINVNVVCPGFIA-SDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSP 226 (244)
T ss_dssp HHHHHHHHHHHHHH--TTTEEEEEEEECSBC-SHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHhh--hcCCEEEEEeeCccc-cchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99999999887643 345688899988765 34432211111 111111111 3468999999998887443
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=232.51 Aligned_cols=221 Identities=16% Similarity=0.198 Sum_probs=173.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||+||||+++|+.|+++|++ |++++|+. ..++..++++.. .++.++.+|++|+++++++++++.+++|+||
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~-V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 99 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWS-LVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFATLR 99 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 89999999999999999999999985 55566653 334455555443 5789999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCC-EEEEecCCccccCCCCChhhhHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~-~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++.. .+ .||++||+++..+.+++..|+++|+
T Consensus 100 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~---~g~~IV~isS~~~~~~~~~~~~Y~asKa 176 (272)
T 2nwq_A 100 GLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG---AGASIVNLGSVAGKWPYPGSHVYGGTKA 176 (272)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC---TTCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEeCCchhccCCCCCchHHHHHH
Confidence 9999999865226788999999999999999999999999999987542 35 7999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-cccchhHHh-hcCCCCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQTDFYFK-SSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~~~~~~~-~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++|++.++.+.. ..++++.+|.+|.+. +.|.... ........+ .....+++|+|..+.+..++..+
T Consensus 177 a~~~l~~~la~el~--~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~ 246 (272)
T 2nwq_A 177 FVEQFSLNLRCDLQ--GTGVRVTNLEPGLCE-SEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQP 246 (272)
T ss_dssp HHHHHHHHHHTTCT--TSCCEEEEEEECSBC---------------------CCCCBCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhC--ccCeEEEEEEcCCCc-CcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCCC
Confidence 99999999987743 346789999988775 4443211 000000000 11234689999999999988754
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.6e-25 Score=255.32 Aligned_cols=326 Identities=13% Similarity=0.108 Sum_probs=228.0
Q ss_pred CCcEEEEeeeeccCCC-CCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCC
Q psy616 630 EELIAIIGMSGRFPAA-RNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEIS 708 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~-~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is 708 (1152)
..+|.|+||++.+|.. .+.++||+.+....+ .+.|..||+...+ ... .+..++. ..++ ..||+.||+++
T Consensus 11 ~~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~i~-~~~-----Gi~~R~~-~~~~-~~~~~~~~~~~ 80 (374)
T 2h84_A 11 NNNSFVLGIGISVPGEPISQQSLKDSISNDFS--DKAETNEKVKRIF-EQS-----QIKTRHL-VRDY-TKPENSIKFRH 80 (374)
T ss_dssp -CCCEEEEEEEECSSSCEEHHHHHHHHHHHSC--SCHHHHHHHHHHH-HTT-----CCCEECC-SSCT-TSGGGCGGGGG
T ss_pred CCCeEEEEEEEeCCCcccCHHHHHHHHHHhhc--cChHHHHHHHHHH-HhC-----CcCccee-ecCc-cccccccccCC
Confidence 3568999999999984 678999998865332 2333344532211 110 1111111 1122 36899999999
Q ss_pred HHHhhcC-----CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcC
Q psy616 709 PLEAERM-----DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMD 783 (1152)
Q Consensus 709 ~~ea~~m-----dpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~ 783 (1152)
+.+...| ++..+++++++++||+|||+++++++ +|++|+..+ +. . ...+.+|++.||
T Consensus 81 ~~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id----~vi~~t~~~-~~--------~-----p~~a~~v~~~lG 142 (374)
T 2h84_A 81 LETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDIT----HIVSVTSTG-II--------I-----PDVNFKLIDLLG 142 (374)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSC-CC--------S-----SCHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeCC-CC--------C-----CcHHHHHHHHcC
Confidence 9999988 89999999999999999999988876 788887652 10 1 125789999999
Q ss_pred CCC--Cccccc-ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCC--CCCccc
Q psy616 784 LKG--PVMAIN-TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDER--ANGLVP 858 (1152)
Q Consensus 784 l~G--Ps~tvd-taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~--a~G~v~ 858 (1152)
++| |++.|. ++|+|++.||+.|++.|++|++|.+||+|++.+. +. +.. ++|.+ .+|+++
T Consensus 143 l~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~~---------~~~------~~dr~~~~~~~lf 206 (374)
T 2h84_A 143 LNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCS-LH---------FSN------TDGGDQMVASSIF 206 (374)
T ss_dssp CCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCG-GG---------CCC------SSSHHHHHHHHHB
T ss_pred cCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc-hh---------hcC------CCCHHHHhhhhhh
Confidence 998 899996 8999999999999999999999999999999842 11 001 12222 258999
Q ss_pred ccccEEEEEcccchhhcCCCceEEEEEEEEEe--cCCC--------CCC------CCCCC--HHHHHHHHHHHHHHcC--
Q psy616 859 SEAVVAVVLKRLSRALSDGDPIHAIIRGSGIN--YDGK--------TNG------ITAPN--GISQTELIKSVYKKSN-- 918 (1152)
Q Consensus 859 gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~--~dG~--------~~~------~~~P~--~~~q~~~i~~al~~Ag-- 918 (1152)
|||++++||++.+++..+ .++ .|.+.+.. .++. ..+ ...|+ ...+.++++++|+++|
T Consensus 207 GDGA~A~vL~~~~~~~~~--~~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~ 283 (374)
T 2h84_A 207 ADGSAAYIIGCNPRIEET--PLY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQ 283 (374)
T ss_dssp CCEEEEEEEESSCCTTCC--CCE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCcEEEEEecCCCcccC--Cce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999998776433 366 55554432 1221 011 11222 3568889999999999
Q ss_pred ----CCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHHHHHHHhhhcCCcC
Q psy616 919 ----LNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSIKYKIIP 993 (1152)
Q Consensus 919 ----i~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~lik~~l~l~~~~ip 993 (1152)
++++||+|| +|++++++.|.++ +.++-.. ..+.+. .+...+||+.+|+-...|-.++ +.+. |
T Consensus 284 ~~~~l~~~did~~-~H~~~~~i~d~~~-----~~lgl~~---~k~~~s~~~~~~~Gnt~sasi~~~L~~~~---~~~~-~ 350 (374)
T 2h84_A 284 TSTAISAKDCEFL-IHTGGKSILMNIE-----NSLGIDP---KQTKNTWDVYHAYGNMSSASVIFVMDHAR---KSKS-L 350 (374)
T ss_dssp SCSCCCSSSSEEE-ECCCCHHHHHHHH-----HHTTCCG---GGGHHHHHHHHHHCBCTTHHHHHHHHHHH---TCSC-C
T ss_pred cccCCChhhcCEe-ECCCCHHHHHHHH-----HHcCCCH---HHHHHHHHHHHHhCCchhhHHHHHHHHHH---hhcC-C
Confidence 999999999 9999999876544 4454322 123332 4567889999998777665543 2221 1
Q ss_pred CCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 994 ASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 994 p~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+ .+.++.+||.|-+-+.++|+-
T Consensus 351 --------------------------------G--d~vll~~~G~G~t~~~~ll~~ 372 (374)
T 2h84_A 351 --------------------------------P--TYSISLAFGPGLAFEGCFLKN 372 (374)
T ss_dssp --------------------------------C--SEEEEEEEETTTEEEEEEEEE
T ss_pred --------------------------------C--CeEEEEEeccchhhhhhhhee
Confidence 1 245688999988888888863
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=233.53 Aligned_cols=231 Identities=16% Similarity=0.126 Sum_probs=176.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-------------cchHHHHHHHHhCCCcEEEEEecCCCHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-------------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMI 301 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-------------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~ 301 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+ +..++..+.++..+.++.+++||++|+++++
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGAD-IIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS 90 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 5899999999999999999999999986 4555544 1223445556667889999999999999999
Q ss_pred HHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc
Q psy616 302 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL 381 (1152)
Q Consensus 302 ~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~ 381 (1152)
++++++.+++|+||+||||||+.. ... +.++|++++++|+.|++++.++++|+|++.. ..+.||++||+++..
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~~~-~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~g~iv~isS~~~~~ 163 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGIAP-MSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQG--TGGSIVLISSSAGLA 163 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCC-CSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--SCEEEEEECCGGGTS
T ss_pred HHHHHHHHHcCCCCEEEECCCCCC-CCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCcEEEEEccHHhcC
Confidence 999999999999999999999875 332 5899999999999999999999999987642 346899999999998
Q ss_pred CC----CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc--chhHH----------hhcC
Q psy616 382 GD----FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--TDFYF----------KSSK 445 (1152)
Q Consensus 382 g~----~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~~~~~----------~~~g 445 (1152)
+. +++..|+++|+++++|++.++.+.. ..++++.+|.+|... +.|....... ..... ....
T Consensus 164 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 240 (278)
T 3sx2_A 164 GVGSADPGSVGYVAAKHGVVGLMRVYANLLA--GQMIRVNSIHPSGVE-TPMINNEFTREWLAKMAAATDTPGAMGNAMP 240 (278)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESCBS-STTTSSHHHHHHHHHHHHHCC--CTTSCSSS
T ss_pred CCccCCCCchHhHHHHHHHHHHHHHHHHHHh--ccCcEEEEEecCCcc-CccchhhhHHHHHhhccchhhhhhhhhhhcC
Confidence 87 7888999999999999999887643 345688899888764 4443211000 00000 0011
Q ss_pred CCCCCHHHHHHHHHHHHhcCc----eeeeeechhh
Q psy616 446 QKVLHENDGLKLFEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 446 ~~~l~~~e~~~~l~~~l~~~~----~~~~v~~~~~ 476 (1152)
.+..+|+|..+++..++.... .+.+.+++.+
T Consensus 241 ~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 241 VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence 245689999999988775432 3555555543
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.7e-23 Score=227.60 Aligned_cols=234 Identities=15% Similarity=0.134 Sum_probs=176.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|++|+++|++ |++++|+.. .++..+ ..+.++.++.+|++|.++++++++++.+++|+
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAK-VVIVDRDKAGAERVAG---EIGDAALAVAADISKEADVDAAVEAALSKFGK 83 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHH---HHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999985 666677642 233333 33678999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhc-CCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQ-KNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~-~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+|+||||||+......+.+.+.++|++++++|+.|++++.++++|+|++.. ....++||++||.++..+.++++.|+++
T Consensus 84 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as 163 (261)
T 3n74_A 84 VDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNAT 163 (261)
T ss_dssp CCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHH
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHH
Confidence 999999999875356788889999999999999999999999999997653 2335689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-----cccchhHHhhcC-CCCCCHHHHHHHHHHHHhcCc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----NEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
|+++++|++.++.+.. ..++++.+|.+|... +.|.... ............ -+..+++|..+++..++....
T Consensus 164 Kaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 240 (261)
T 3n74_A 164 KGWVVSVTKALAIELA--PAKIRVVALNPVAGE-TPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQA 240 (261)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEEC--------------------------CTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHhh--hcCcEEEEEecCccc-ChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcc
Confidence 9999999999988754 345688888887664 3332211 111111111111 135789999999998875432
Q ss_pred ----eeeeeechh
Q psy616 467 ----IQYLVLSGE 475 (1152)
Q Consensus 467 ----~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 241 ~~itG~~i~vdgG 253 (261)
T 3n74_A 241 SMITGVALDVDGG 253 (261)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCcCCcEEEecCC
Confidence 355555544
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-23 Score=233.25 Aligned_cols=235 Identities=13% Similarity=0.010 Sum_probs=182.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEec-CCc-chHHHHHHHH-hCCCcEEEEEecCCCHH-------------
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSG-RSK-LNSIIYKKLK-KFNNKAIYIQVDVSDKL------------- 298 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~-R~~-~~~~~~~~l~-~~g~~v~~~~~Dvsd~~------------- 298 (1152)
.++++|||||++|||+++|+.|+++|++ |++++ |+. ..++..++++ ..+.++.++++|++|.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence 4789999999999999999999999985 55555 663 3455566665 56778999999999999
Q ss_pred ----HHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCC--------------HHHHHHHHhhhchHHHHHHHHHHHHH
Q psy616 299 ----KMISEINSIINNIGPIDGVLHIAGISGLTSNILEAN--------------YKNFYSVLSSKISGTIALNYALENTI 360 (1152)
Q Consensus 299 ----~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~--------------~e~~~~~~~~kv~g~~~L~~~~~p~m 360 (1152)
+++++++++.+++|+||+||||||+.. ..++.+.+ .++|++++++|+.|++++.++++|+|
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 165 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 165 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999999999999999887 67788888 99999999999999999999999998
Q ss_pred HHhcC---CCCCEEEEecCCccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-
Q psy616 361 LKLQK---NKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ- 436 (1152)
Q Consensus 361 ~~~~~---~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~- 436 (1152)
++... ...+.||++||+++..+.+++..|+++|+++.+|++.++.+.. ..++++.+|.+|.. ++.| . ....
T Consensus 166 ~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v-~T~~-~-~~~~~ 240 (291)
T 1e7w_A 166 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA--PLQIRVNGVGPGLS-VLVD-D-MPPAV 240 (291)
T ss_dssp HTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSB-CCGG-G-SCHHH
T ss_pred HhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHH--hcCeEEEEEeeCCc-cCCc-c-CCHHH
Confidence 64321 0147899999999999999999999999999999999887643 34568888988766 4555 2 1111
Q ss_pred chhHHhhcCC--CCCCHHHHHHHHHHHHhcC----ceeeeeechhh
Q psy616 437 TDFYFKSSKQ--KVLHENDGLKLFEQLLIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 437 ~~~~~~~~g~--~~l~~~e~~~~l~~~l~~~----~~~~~v~~~~~ 476 (1152)
.........+ +..+|+|..+.+..++... ..+.+.+++.+
T Consensus 241 ~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 286 (291)
T 1e7w_A 241 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 286 (291)
T ss_dssp HHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence 1111122222 4578999999999888643 22455555543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=232.59 Aligned_cols=223 Identities=13% Similarity=0.154 Sum_probs=178.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|+.|+++|++ |+++.|+. ..++..++++..+.++.++.||++|+++++++++++.+++|+
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLR-VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999985 55566663 345566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHH--HHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENT--ILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~--m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|. |++. ..+.||++||+++..+.++...|++
T Consensus 100 iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~a 175 (277)
T 2rhc_B 100 VDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER---GTGRIVNIASTGGKQGVVHAAPYSA 175 (277)
T ss_dssp CSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH---TEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc---CCeEEEEECccccccCCCCCccHHH
Confidence 999999999877 678889999999999999999999999999998 8653 2467999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhhcCC-CCCCHHHHHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQ-KVLHENDGLKLF 458 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~-~~l~~~e~~~~l 458 (1152)
+|++++.|++.++.+.. ..++++.+|.+|... +.|.... ............+ +..+++|..+++
T Consensus 176 sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v 252 (277)
T 2rhc_B 176 SKHGVVGFTKALGLELA--RTGITVNAVCPGFVE-TPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMV 252 (277)
T ss_dssp HHHHHHHHHHHHHHHHT--TTEEEEEEEEECSBC-SHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--HhCcEEEEEecCcCc-CchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 99999999999887643 335688889888765 3332111 0000111111111 357899999999
Q ss_pred HHHHhcC
Q psy616 459 EQLLIQD 465 (1152)
Q Consensus 459 ~~~l~~~ 465 (1152)
..++...
T Consensus 253 ~~l~s~~ 259 (277)
T 2rhc_B 253 AYLIGPG 259 (277)
T ss_dssp HHHHSGG
T ss_pred HHHhCch
Confidence 8887543
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-23 Score=231.83 Aligned_cols=235 Identities=12% Similarity=0.082 Sum_probs=182.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|++ |+++.|+. ..++..++++..+ ++.++.+|++|+++++++++++.+.+|+
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGAR-VFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSAR 105 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999984 66666764 3445556666555 7899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcC-CCCCEEEEecCCccccCCCCCh-hhhH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK-NKLDFVCYFSSSSAILGDFGSC-DYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~-~~~~~iV~~SS~a~~~g~~g~~-~Yaa 391 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++... ...+.||++||+++..+.++.. .|++
T Consensus 106 iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~a 184 (276)
T 2b4q_A 106 LDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGP 184 (276)
T ss_dssp CSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHH
Confidence 999999999887 677889999999999999999999999999999876432 1237899999999999999998 9999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHh--hcC-CCCCCHHHHHHHHHHHHhcC--
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFK--SSK-QKVLHENDGLKLFEQLLIQD-- 465 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~--~~g-~~~l~~~e~~~~l~~~l~~~-- 465 (1152)
+|++++.|++.++.+.. ..++++.+|.+|... +.|........ ..... ... -+..+++|..+++..++...
T Consensus 185 sK~a~~~~~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~ 261 (276)
T 2b4q_A 185 SKAALHQLSRMLAKELV--GEHINVNVIAPGRFP-SRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGA 261 (276)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-STTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHhc--ccCeEEEEEEeccCc-CcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCcccc
Confidence 99999999999887643 335688889887664 44432110000 11111 111 13568999999999887643
Q ss_pred --ceeeeeechh
Q psy616 466 --KIQYLVLSGE 475 (1152)
Q Consensus 466 --~~~~~v~~~~ 475 (1152)
..+.+.+++.
T Consensus 262 ~~tG~~i~vdGG 273 (276)
T 2b4q_A 262 YMTGNVIPIDGG 273 (276)
T ss_dssp TCCSCEEEESTT
T ss_pred CCCCCEEEeCCC
Confidence 1344544443
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-23 Score=229.41 Aligned_cols=234 Identities=14% Similarity=0.134 Sum_probs=183.6
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~-~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
+++++|||||+ +|||+++|++|+++|++++++..+.... ++..+++.. .+.++.+++||++|.++++++++++.++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD 98 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 57999999999 9999999999999998655555554443 555666653 4788999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC--CCChh
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--FGSCD 388 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~--~g~~~ 388 (1152)
+|+||+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.|+|++.. .+.||++||.++..+. +++..
T Consensus 99 ~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~~ 174 (267)
T 3gdg_A 99 FGQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG---TGSLVITASMSGHIANFPQEQTS 174 (267)
T ss_dssp TSCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCGGGTSCCSSSCCHH
T ss_pred cCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC---CceEEEEccccccccCCCCCCCc
Confidence 999999999999987 67788999999999999999999999999999987643 4679999999998887 68999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHh-hcCC-CCCCHHHHHHHHHHHHhcCc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFK-SSKQ-KVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~-~~g~-~~l~~~e~~~~l~~~l~~~~ 466 (1152)
|+++|+++++|++.++.+.. .. +++.+|.+|... ++|...........+. ...+ +..+++|..+.+..++....
T Consensus 175 Y~~sK~a~~~~~~~la~e~~--~~-i~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~ 250 (267)
T 3gdg_A 175 YNVAKAGCIHMARSLANEWR--DF-ARVNSISPGYID-TGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDAS 250 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--TT-CEEEEEEECCEE-CSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTC
T ss_pred chHHHHHHHHHHHHHHHHhc--cC-cEEEEEECCccc-cchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCcc
Confidence 99999999999999988753 22 688888887664 5554322221111111 1111 23468999999888875432
Q ss_pred ----eeeeeechhh
Q psy616 467 ----IQYLVLSGEL 476 (1152)
Q Consensus 467 ----~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 251 ~~itG~~i~vdgG~ 264 (267)
T 3gdg_A 251 TYTTGADLLIDGGY 264 (267)
T ss_dssp TTCCSCEEEESTTG
T ss_pred ccccCCEEEECCce
Confidence 3556566554
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-23 Score=229.76 Aligned_cols=222 Identities=16% Similarity=0.132 Sum_probs=176.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+||||+++|+.|+++|+ +|++++|+. ..++..++++.. +.++.++++|++|+++++++++++.+++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999998 556666663 334555566554 77899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||+++..+.++...|+++
T Consensus 85 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~s 160 (263)
T 3ai3_A 85 GADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR---GGGAIIHNASICAVQPLWYEPIYNVT 160 (263)
T ss_dssp SCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEECchhhcCCCCCcchHHHH
Confidence 9999999999987 6788899999999999999999999999999998754 24679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhh-cC-CCCCCHHHHHHHH
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKS-SK-QKVLHENDGLKLF 458 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~-~g-~~~l~~~e~~~~l 458 (1152)
|++++.|++.++.+.. ..++++.+|.+|.... .|.... .......... .. -+..+++|..+++
T Consensus 161 K~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~ 237 (263)
T 3ai3_A 161 KAALMMFSKTLATEVI--KDNIRVNCINPGLILT-PDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFF 237 (263)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBCC-HHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh--hcCcEEEEEecCcccC-cchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence 9999999999887643 2356888898876643 332110 0000111111 11 2357899999988
Q ss_pred HHHHhc
Q psy616 459 EQLLIQ 464 (1152)
Q Consensus 459 ~~~l~~ 464 (1152)
..++..
T Consensus 238 ~~l~s~ 243 (263)
T 3ai3_A 238 VFLCSE 243 (263)
T ss_dssp HHHTST
T ss_pred HHHcCc
Confidence 887754
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-23 Score=233.79 Aligned_cols=233 Identities=15% Similarity=0.112 Sum_probs=182.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCC---cEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNN---KAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~---~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+ +..++..+++...+. ++.++.+|++|+++++++++++.++
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQ-VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999985 5555666 344556667766666 8999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcc--cccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-CCCh
Q psy616 311 IGPIDGVLHIAGISGLTSN--ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-FGSC 387 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~--~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-~g~~ 387 (1152)
+|++|+||||||+.. ..+ +.+.+.++|++++++|+.|++++.+++.|.|++. . +.||++||+++..+. ++..
T Consensus 104 ~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~-g~IV~isS~~~~~~~~~~~~ 178 (297)
T 1xhl_A 104 FGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT---K-GEIVNVSSIVAGPQAHSGYP 178 (297)
T ss_dssp HSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---T-CEEEEECCGGGSSSCCTTSH
T ss_pred cCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc---C-CEEEEEcCchhccCCCCCcc
Confidence 999999999999876 556 8899999999999999999999999999998653 2 789999999999988 8999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--ccc----chhHHh----hcC-CCCCCHHHHHH
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQ----TDFYFK----SSK-QKVLHENDGLK 456 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~----~~~~~~----~~g-~~~l~~~e~~~ 456 (1152)
.|+++|+++++|++.++.+.. ..++++.+|.+|.+. +.|.... ... ...... ... -+..+|+|..+
T Consensus 179 ~Y~asKaa~~~l~~~la~el~--~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~ 255 (297)
T 1xhl_A 179 YYACAKAALDQYTRCTAIDLI--QHGVRVNSVSPGAVA-TGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIAN 255 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-SSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEeeCCCc-CccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 999999999999999887643 335688899988764 4442211 000 000111 111 13578999999
Q ss_pred HHHHHHhcC-----ceeeeeechhh
Q psy616 457 LFEQLLIQD-----KIQYLVLSGEL 476 (1152)
Q Consensus 457 ~l~~~l~~~-----~~~~~v~~~~~ 476 (1152)
++..++... ..+.+.+++.+
T Consensus 256 ~v~~l~s~~~~~~itG~~i~vdGG~ 280 (297)
T 1xhl_A 256 IIVFLADRNLSSYIIGQSIVADGGS 280 (297)
T ss_dssp HHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred HHHHHhCCcccCCccCcEEEECCCc
Confidence 998887543 23556666554
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-23 Score=229.03 Aligned_cols=231 Identities=15% Similarity=0.140 Sum_probs=178.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|+.|+++|++ |++++|+.. .++.. +..+.++.++.+|++|+++++++++++.+++|+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGAR-VVLADVLDEEGAATA---RELGDAARYQHLDVTIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHH---HTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHH---HHhCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999985 555666532 22222 233667899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++. ..+.||++||+++..+.++...|+++|
T Consensus 80 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 155 (254)
T 1hdc_A 80 VDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA---GGGSIVNISSAAGLMGLALTSSYGASK 155 (254)
T ss_dssp CCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCCEEEEECchhhccCCCCchhHHHHH
Confidence 999999999877 6778899999999999999999999999999998754 246899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-ccchhHHhhcCC-CCC-CHHHHHHHHHHHHhcC----c
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQTDFYFKSSKQ-KVL-HENDGLKLFEQLLIQD----K 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~~~~~~~~~g~-~~l-~~~e~~~~l~~~l~~~----~ 466 (1152)
+++++|++.++.+.. ..++++.+|.+|... +.|..... ...........+ +.. +++|..+.+..++... .
T Consensus 156 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~t 232 (254)
T 1hdc_A 156 WGVRGLSKLAAVELG--TDRIRVNSVHPGMTY-TPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVT 232 (254)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEecccCc-CccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCC
Confidence 999999999887643 335688888887664 33321100 000001111111 235 8999999999887643 2
Q ss_pred eeeeeechhh
Q psy616 467 IQYLVLSGEL 476 (1152)
Q Consensus 467 ~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 233 G~~~~vdgG~ 242 (254)
T 1hdc_A 233 GAELAVDGGW 242 (254)
T ss_dssp SCEEEESTTT
T ss_pred CCEEEECCCc
Confidence 3555555543
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-23 Score=231.27 Aligned_cols=233 Identities=15% Similarity=0.105 Sum_probs=182.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCC---cEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNN---KAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~---~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+. ..++..++++..+. ++.++.+|++|+++++++++++.++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGAN-VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999985 55556663 44556666766666 8999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcc----cccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-CC
Q psy616 311 IGPIDGVLHIAGISGLTSN----ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-FG 385 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~----~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-~g 385 (1152)
+|++|+||||||+.. ..+ +.+.+.++|++++++|+.|++++.+++.|.|++.. +.||++||+++..+. ++
T Consensus 84 ~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----g~iv~isS~~~~~~~~~~ 158 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK----GEIVNVSSIVAGPQAQPD 158 (280)
T ss_dssp HSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEECCGGGSSSCCCS
T ss_pred cCCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC----CcEEEecCccccCCCCCc
Confidence 999999999999876 555 78899999999999999999999999999986532 689999999999888 89
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--ccc----chhHHhh----cC-CCCCCHHHH
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQ----TDFYFKS----SK-QKVLHENDG 454 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~----~~~~~~~----~g-~~~l~~~e~ 454 (1152)
...|+++|+++++|++.++.+.. ..++++.+|.+|... +.|.... ... .....+. .. -+..+|+|.
T Consensus 159 ~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedv 235 (280)
T 1xkq_A 159 FLYYAIAKAALDQYTRSTAIDLA--KFGIRVNSVSPGMVE-TGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHI 235 (280)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCBC-SSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhc--cCCeEEEEEeeCcCc-CCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHH
Confidence 99999999999999999887643 345688899887664 4443211 000 0001111 11 135789999
Q ss_pred HHHHHHHHhcC-----ceeeeeechhh
Q psy616 455 LKLFEQLLIQD-----KIQYLVLSGEL 476 (1152)
Q Consensus 455 ~~~l~~~l~~~-----~~~~~v~~~~~ 476 (1152)
.+.+..++... ..+.+.+++.+
T Consensus 236 A~~v~~l~s~~~~~~~tG~~i~vdgG~ 262 (280)
T 1xkq_A 236 ANIILFLADRNLSFYILGQSIVADGGT 262 (280)
T ss_dssp HHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred HHHHHHhcCcccccCccCCeEEECCCc
Confidence 99998887543 23556666654
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=234.67 Aligned_cols=231 Identities=13% Similarity=0.094 Sum_probs=179.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-c--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-K--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||++|||+++|+.|+++|++ |+++.|+ . ..++..+.++..+.++.+++||++|+++++++++++.+++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5799999999999999999999999985 4555554 2 2344555667778899999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||+......+.+.+.++|++++++|+.|++++.++++|+|++ .+.||++||+++..+.+++..|++
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----~g~Iv~isS~~~~~~~~~~~~Y~a 201 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-----GASIITTSSIQAYQPSPHLLDYAA 201 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-----TCEEEEECCGGGTSCCTTCHHHHH
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-----CCEEEEECChhhccCCCCchHHHH
Confidence 999999999998653467889999999999999999999999999987532 368999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc---ccccchhHHhhcC-CCCCCHHHHHHHHHHHHhcCc-
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQDK- 466 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~~- 466 (1152)
+|+++++|++.++.+.. ..++++.+|.+|.... .|... ............. -+..+++|..+++..++....
T Consensus 202 sKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~t-~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~ 278 (294)
T 3r3s_A 202 TKAAILNYSRGLAKQVA--EKGIRVNIVAPGPIWT-ALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESS 278 (294)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTCEEEEEEECSBCS-HHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHh--hcCeEEEEEecCcCcc-ccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 99999999999987753 3356888898887653 33111 0111111111111 134688999999888775432
Q ss_pred ---eeeeeech
Q psy616 467 ---IQYLVLSG 474 (1152)
Q Consensus 467 ---~~~~v~~~ 474 (1152)
.+.+.+++
T Consensus 279 ~itG~~i~vdG 289 (294)
T 3r3s_A 279 YVTAEVHGVCG 289 (294)
T ss_dssp TCCSCEEEEST
T ss_pred CCCCCEEEECC
Confidence 24454444
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-23 Score=228.81 Aligned_cols=224 Identities=15% Similarity=0.113 Sum_probs=177.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|+ +|++++|+. ..++..++++..+.++.++.+|++|.++++++++++.+.+|+
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999998 555666663 345566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||.++..+.++...|+++|
T Consensus 92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK 168 (260)
T 2zat_A 92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR---GGGSVLIVSSVGAYHPFPNLGPYNVSK 168 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCCEEEEEechhhcCCCCCchhHHHHH
Confidence 99999999986424678899999999999999999999999999998653 356899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc---ccccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG---NNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~---~~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.|++.++.+.. ..++++.+|.+|... +.|... ............. .+...++|..+++..++...
T Consensus 169 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 241 (260)
T 2zat_A 169 TALLGLTKNLAVELA--PRNIRVNCLAPGLIK-TNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSED 241 (260)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEEECccc-CccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 999999999887643 335688888887664 334211 0000011111111 23568899999888877543
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-23 Score=236.48 Aligned_cols=216 Identities=13% Similarity=0.100 Sum_probs=178.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc--------hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL--------NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS 306 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~--------~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 306 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+.. .++..++++..+.++.++.||++|++++++++++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGAN-IVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCE-EEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 5899999999999999999999999984 555666532 3566777888899999999999999999999999
Q ss_pred HHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC--CC
Q psy616 307 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--DF 384 (1152)
Q Consensus 307 ~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g--~~ 384 (1152)
+.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ...++||++||+.+..+ .+
T Consensus 123 ~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~~~g~IV~iSS~~~~~~~~~~ 198 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKK---SKVAHILNISPPLNLNPVWFK 198 (346)
T ss_dssp HHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTT---CSSCEEEEECCCCCCCGGGTS
T ss_pred HHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---CCCCEEEEECCHHHcCCCCCC
Confidence 9999999999999999987 788899999999999999999999999999999754 34578999999999887 78
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
++..|+++|++++.|++.++.+.. .++++.+|.+|..-++.|....... ...-+..+|++..+.+..++..
T Consensus 199 ~~~~Y~aSKaal~~l~~~la~e~~---~gIrvn~v~PG~~i~T~~~~~~~~~------~~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 199 QHCAYTIAKYGMSMYVLGMAEEFK---GEIAVNALWPKTAIHTAAMDMLGGP------GIESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTT---TTCEEEEEECSBCBCCHHHHHHCC--------CGGGCBCTHHHHHHHHHHHTS
T ss_pred CchHHHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCccccHHHHhhccc------cccccCCCHHHHHHHHHHHHhc
Confidence 999999999999999999988742 4578888888743344432110000 0011346899999999998865
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.6e-23 Score=223.61 Aligned_cols=217 Identities=17% Similarity=0.128 Sum_probs=180.2
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCc------EEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYST------NLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~------~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
++++|||||+||||++++++|+++|+. +|++++|+. ..+.+.++++..+.++.++.+|++|+++++++++++.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 578999999999999999999999984 677777764 3345556676668889999999999999999999999
Q ss_pred hhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 309 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 309 ~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++. ..++||++||.++..+.++...
T Consensus 82 ~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~ 157 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ---HSGHIFFITSVAATKAFRHSSI 157 (244)
T ss_dssp HHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHH
T ss_pred HhCCCCCEEEEcCCcCC-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC---CCCEEEEEecchhcCCCCCCch
Confidence 99999999999999987 6788899999999999999999999999999998653 3468999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
|+++|++++.|++.++.+.. ..++++.+|.+|... +.|....... . ....+++++..+.+..++..+.
T Consensus 158 Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~--~-----~~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 158 YCMSKFGQRGLVETMRLYAR--KCNVRITDVQPGAVY-TPMWGKVDDE--M-----QALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--TTTEEEEEEEECCBC-STTTCCCCST--T-----GGGSBCHHHHHHHHHHHHTSCT
T ss_pred hHHHHHHHHHHHHHHHHHhh--ccCcEEEEEECCCcc-chhhhhcccc--c-----cccCCCHHHHHHHHHHHHhCCc
Confidence 99999999999998876533 345688899988664 4443221111 0 1246899999999999887653
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-23 Score=229.22 Aligned_cols=235 Identities=13% Similarity=0.124 Sum_probs=179.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~-~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||++|||+++|++|+++|++++++.+++... +...+.++..+.++.+++||++|+++++++++++.+++|+
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999998665555555433 3344445556778999999999999999999999999999
Q ss_pred eeEEEEccc--ccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCC-cc-ccCCCCChhh
Q psy616 314 IDGVLHIAG--ISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSS-SA-ILGDFGSCDY 389 (1152)
Q Consensus 314 idgvIh~AG--~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~-a~-~~g~~g~~~Y 389 (1152)
+|+|||||| ... ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||. ++ ..+.++.+.|
T Consensus 86 id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~~~~~~Y 161 (264)
T 3i4f_A 86 IDFLINNAGPYVFE-RKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ---NFGRIINYGFQGADSAPGWIYRSAF 161 (264)
T ss_dssp CCEEECCCCCCCCS-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred CCEEEECCcccccC-CCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc---CCCeEEEEeechhcccCCCCCCchh
Confidence 999999999 444 5678899999999999999999999999999998764 34679999998 44 6677889999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchh-HHhhcC-CCCCCHHHHHHHHHHHHhcCc-
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF-YFKSSK-QKVLHENDGLKLFEQLLIQDK- 466 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~-~~~~~g-~~~l~~~e~~~~l~~~l~~~~- 466 (1152)
+++|+++++|++.++.+.. ..++++.+|.+|... +.|.......... ...... -+..+++|..+.+..++....
T Consensus 162 ~asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~ 238 (264)
T 3i4f_A 162 AAAKVGLVSLTKTVAYEEA--EYGITANMVCPGDII-GEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSD 238 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-GGGGSCCHHHHHHC--------CCCCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCcEEEEEccCCcc-CccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccC
Confidence 9999999999999887643 345688889887664 4443322111111 011111 124589999999998886542
Q ss_pred ---eeeeeechhh
Q psy616 467 ---IQYLVLSGEL 476 (1152)
Q Consensus 467 ---~~~~v~~~~~ 476 (1152)
.+.+.+++.+
T Consensus 239 ~itG~~i~vdGG~ 251 (264)
T 3i4f_A 239 MITGTIIEVTGAV 251 (264)
T ss_dssp TCCSCEEEESCSC
T ss_pred CCCCcEEEEcCce
Confidence 3566666544
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=235.66 Aligned_cols=233 Identities=13% Similarity=0.007 Sum_probs=181.5
Q ss_pred CCCEEEEECCch--hHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~g--GIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+| |||+++|+.|+++|++ |++++|++...+..+++......+.+++||++|+++++++++++.+++|
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAE-VALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 589999999987 9999999999999985 6666676544444444433333468899999999999999999999999
Q ss_pred CeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 313 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
+||+||||||+... ..++.+.+.++|++++++|+.|++++.+++.|+|++ .+.||++||+++..+.+++..|
T Consensus 108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-----~g~IV~isS~~~~~~~~~~~~Y 182 (296)
T 3k31_A 108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-----GGSILTLSYYGAEKVVPHYNVM 182 (296)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-----CEEEEEEECGGGTSCCTTTTHH
T ss_pred CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCEEEEEEehhhccCCCCchhh
Confidence 99999999998751 167889999999999999999999999999988632 4689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++|+++.+|++.++.+.. ..++++.+|.+|... +.|....... ......... -+..+++|..+++..++...
T Consensus 183 ~asKaal~~l~~~la~e~~--~~gIrvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~ 259 (296)
T 3k31_A 183 GVCKAALEASVKYLAVDLG--KQQIRVNAISAGPVR-TLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDL 259 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TTTEEEEEEEECCCC-CSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHh--hcCcEEEEEEECCCc-CchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence 9999999999999987753 346788899888765 4443322111 111111222 23568999999999888643
Q ss_pred ----ceeeeeechhh
Q psy616 466 ----KIQYLVLSGEL 476 (1152)
Q Consensus 466 ----~~~~~v~~~~~ 476 (1152)
..+.+.+++.+
T Consensus 260 a~~itG~~i~vdGG~ 274 (296)
T 3k31_A 260 GRGTTGETVHVDCGY 274 (296)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred cCCccCCEEEECCCc
Confidence 23666666665
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.2e-23 Score=227.92 Aligned_cols=221 Identities=10% Similarity=0.006 Sum_probs=172.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+. ..++..++++.. +.++.++.+|++|+++++++++++.+++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGAR-LLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999984 55666663 334455556543 4478999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
| +|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||.++..+.+++..|++
T Consensus 85 g-id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~ 159 (260)
T 2z1n_A 85 G-ADILVYSTGGPR-PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK---GWGRMVYIGSVTLLRPWQDLALSNI 159 (260)
T ss_dssp C-CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred C-CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEECchhhcCCCCCCchhHH
Confidence 9 999999999876 6788899999999999999999999999999998754 3467999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccc----------ccccc--chhHHhhcCC-CCCCHHHHHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI----------GNNEQ--TDFYFKSSKQ-KVLHENDGLKLF 458 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~----------~~~~~--~~~~~~~~g~-~~l~~~e~~~~l 458 (1152)
+|+++..|++.++.+.. ..++++.+|.+|... +.|.. ..... .........+ +..+|+|..+.+
T Consensus 160 sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v 236 (260)
T 2z1n_A 160 MRLPVIGVVRTLALELA--PHGVTVNAVLPSLIL-TDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVV 236 (260)
T ss_dssp HTHHHHHHHHHHHHHHG--GGTEEEEEEEECHHH-HCCCC-----------------------CCTTSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--hhCeEEEEEEECCcc-cchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence 99999999999887643 335688888877654 33432 10000 0111111111 235899999999
Q ss_pred HHHHhc
Q psy616 459 EQLLIQ 464 (1152)
Q Consensus 459 ~~~l~~ 464 (1152)
..++..
T Consensus 237 ~~l~s~ 242 (260)
T 2z1n_A 237 AFLASE 242 (260)
T ss_dssp HHHTSG
T ss_pred HHHhCc
Confidence 888754
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.8e-23 Score=224.45 Aligned_cols=228 Identities=16% Similarity=0.176 Sum_probs=176.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|++|+++|++ |++++|+.. .++.. +..+ +.++.+|++|+++++++++++.+++|+
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~---~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGAR-LVACDIEEGPLREAA---EAVG--AHPVVMDVADPASVERGFAEALAHLGR 77 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHH---HTTT--CEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHH---HHcC--CEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999985 555566532 22222 2234 678999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++ ...+.||++||.+ ..+.+++..|+++|
T Consensus 78 id~lvn~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~~~g~iv~isS~~-~~~~~~~~~Y~asK 152 (245)
T 1uls_A 78 LDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMRE---KNPGSIVLTASRV-YLGNLGQANYAASM 152 (245)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TCCEEEEEECCGG-GGCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---cCCCEEEEEccch-hcCCCCchhHHHHH
Confidence 999999999987 678889999999999999999999999999999753 3457899999999 88999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcC-CCCCCHHHHHHHHHHHHhcC----ce
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQD----KI 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~----~~ 467 (1152)
+++.+|++.++.+.. ..++++.+|.+|.. .+.|....... ......... -+..++++..+.+..++... ..
T Consensus 153 ~a~~~~~~~la~e~~--~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG 229 (245)
T 1uls_A 153 AGVVGLTRTLALELG--RWGIRVNTLAPGFI-ETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITG 229 (245)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSB-CCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHh--HhCeEEEEEEeCcC-cCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 999999999887643 33568888988766 44554321111 111111111 23578999999998887643 23
Q ss_pred eeeeechhh
Q psy616 468 QYLVLSGEL 476 (1152)
Q Consensus 468 ~~~v~~~~~ 476 (1152)
+.+.+++.+
T Consensus 230 ~~~~vdgG~ 238 (245)
T 1uls_A 230 QVLFVDGGR 238 (245)
T ss_dssp CEEEESTTT
T ss_pred CEEEECCCc
Confidence 455555543
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.4e-23 Score=232.59 Aligned_cols=234 Identities=12% Similarity=0.006 Sum_probs=181.1
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+ +|||+++|+.|+++|++ |++++|++...+..+++.....++.+++||++|+++++++++++.++||
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAE-LAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCE-EEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 68999999999 55999999999999985 6666777544444555544445789999999999999999999999999
Q ss_pred CeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 313 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
+||+||||||+... ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.||++||.++..+.+++..|
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-----~g~Iv~isS~~~~~~~~~~~~Y 183 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-----GGSILTLTYYGAEKVMPNYNVM 183 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-----CEEEEEEECGGGTSBCTTTTHH
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CCEEEEEeehhhccCCCchHHH
Confidence 99999999998741 357889999999999999999999999999998642 4689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++|+++.+|++.++.+.. ..++++.+|.+|... +.|....... .........+ +..+++|..+++..++...
T Consensus 184 ~asKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 260 (293)
T 3grk_A 184 GVAKAALEASVKYLAVDLG--PQNIRVNAISAGPIK-TLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDL 260 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-C------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHh--HhCCEEEEEecCCCc-chhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 9999999999999987754 345688899888765 4443221111 1111122222 3568999999999887643
Q ss_pred ----ceeeeeechhhh
Q psy616 466 ----KIQYLVLSGELE 477 (1152)
Q Consensus 466 ----~~~~~v~~~~~~ 477 (1152)
..+.+.+++.+.
T Consensus 261 ~~~itG~~i~vdGG~~ 276 (293)
T 3grk_A 261 SRSVTGEVHHADSGYH 276 (293)
T ss_dssp GTTCCSCEEEESTTGG
T ss_pred ccCCcceEEEECCCcc
Confidence 236666666553
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=225.59 Aligned_cols=227 Identities=15% Similarity=0.079 Sum_probs=171.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+... ..+.++..+ +.++.+|++|+++++++++++.+++|++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~--~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHR-VIISYRTEHA--SVTELRQAG--AVALYGDFSCETGIMAFIDLLKTQTSSL 100 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESSCCH--HHHHHHHHT--CEEEECCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCChHH--HHHHHHhcC--CeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999986 4555555432 233444444 6789999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ... .+.+.++|++++++|+.|++++.++++|+|++ ...+.||++||+++..+.++...|+++|+
T Consensus 101 D~lv~nAg~~~-~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~~~g~iv~isS~~~~~~~~~~~~Y~asKa 175 (260)
T 3gem_A 101 RAVVHNASEWL-AET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTA---SEVADIVHISDDVTRKGSSKHIAYCATKA 175 (260)
T ss_dssp SEEEECCCCCC-CCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHT---SSSCEEEEECCGGGGTCCSSCHHHHHHHH
T ss_pred CEEEECCCccC-CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcEEEEECChhhcCCCCCcHhHHHHHH
Confidence 99999999876 444 67788999999999999999999999999764 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc--eeeee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK--IQYLV 471 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~--~~~~v 471 (1152)
++++|++.++.+... ++++.+|.+|.... .|.... ...........+ +..+++|..+++..++.... .+.+.
T Consensus 176 a~~~l~~~la~e~~~---~Irvn~v~PG~v~t-~~~~~~-~~~~~~~~~~p~~r~~~~edva~~v~~L~~~~~itG~~i~ 250 (260)
T 3gem_A 176 GLESLTLSFAARFAP---LVKVNGIAPALLMF-QPKDDA-AYRANALAKSALGIEPGAEVIYQSLRYLLDSTYVTGTTLT 250 (260)
T ss_dssp HHHHHHHHHHHHHTT---TCEEEEEEECTTCC-----------------CCSCCCCCTHHHHHHHHHHHHCSSCCSCEEE
T ss_pred HHHHHHHHHHHHHCC---CCEEEEEeeccccc-CCCCCH-HHHHHHHhcCCCCCCCCHHHHHHHHHHHhhCCCCCCCEEE
Confidence 999999999887532 47888898887643 332211 111111121111 23578999999988885432 35555
Q ss_pred echhh
Q psy616 472 LSGEL 476 (1152)
Q Consensus 472 ~~~~~ 476 (1152)
+++.+
T Consensus 251 vdGG~ 255 (260)
T 3gem_A 251 VNGGR 255 (260)
T ss_dssp ESTTT
T ss_pred ECCCc
Confidence 55543
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-23 Score=230.91 Aligned_cols=234 Identities=13% Similarity=0.035 Sum_probs=182.1
Q ss_pred ccCCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 233 IKQGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 233 ~~~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
..+++++|||||+ +|||+++|+.|+++|+ +|+++.|+....+..+++.....++.+++||++|+++++++++++.++
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999 9999999999999998 566667776555666666555556889999999999999999999999
Q ss_pred cCCeeEEEEcccccCcC----ccccc-CCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC
Q psy616 311 IGPIDGVLHIAGISGLT----SNILE-ANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 385 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~----~~~~~-~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g 385 (1152)
+|+||+||||||+.. . ..+.+ .+.++|++++++|+.|++++.+++.|+|+ +.+.||++||.++..+.++
T Consensus 90 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~g~iv~isS~~~~~~~~~ 163 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAP-REAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLS-----DDASLLTLSYLGAERAIPN 163 (271)
T ss_dssp CSCEEEEEECCCCCC-GGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEE-----EEEEEEEEECGGGTSBCTT
T ss_pred cCCCCEEEECCccCc-cccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhc-----cCceEEEEeccccccCCCC
Confidence 999999999999876 3 44555 89999999999999999999999998753 2467999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhHHhhcC-CCCCCHHHHHHHHHHH
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSK-QKVLHENDGLKLFEQL 461 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g-~~~l~~~e~~~~l~~~ 461 (1152)
++.|+++|+++++|++.++.+.. ..++++.+|.+|... +.|...... .......... -+..++++..+.+..+
T Consensus 164 ~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l 240 (271)
T 3ek2_A 164 YNTMGLAKAALEASVRYLAVSLG--AKGVRVNAISAGPIK-TLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFL 240 (271)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCC------CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHH--hcCcEEEEEecCccc-chhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999987753 345788899888765 445332211 1111112222 2357899999999988
Q ss_pred HhcC----ceeeeeechhh
Q psy616 462 LIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 462 l~~~----~~~~~v~~~~~ 476 (1152)
+... ..+.+.+++.+
T Consensus 241 ~s~~~~~~tG~~i~vdgG~ 259 (271)
T 3ek2_A 241 LSDLASGVTAEVMHVDSGF 259 (271)
T ss_dssp HSGGGTTCCSEEEEESTTG
T ss_pred cCcccCCeeeeEEEECCCe
Confidence 8653 23666666655
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=228.71 Aligned_cols=236 Identities=11% Similarity=0.061 Sum_probs=179.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC--cchHHHHHHHH-hCCCcEEEEEecCCC----HHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLK-KFNNKAIYIQVDVSD----KLKMISEINSI 307 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~--~~~~~~~~~l~-~~g~~v~~~~~Dvsd----~~~v~~~~~~~ 307 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+ +..+++.++++ ..+.++.++++|++| +++++++++++
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYR-VVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCE-EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 5789999999999999999999999985 5555555 34455666666 567789999999999 99999999999
Q ss_pred HhhcCCeeEEEEcccccCcCccc-----cc-----CCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcC---CCCCEEEEe
Q psy616 308 INNIGPIDGVLHIAGISGLTSNI-----LE-----ANYKNFYSVLSSKISGTIALNYALENTILKLQK---NKLDFVCYF 374 (1152)
Q Consensus 308 ~~~~G~idgvIh~AG~~~~~~~~-----~~-----~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~---~~~~~iV~~ 374 (1152)
.+.+|+||+||||||+.. ..++ .+ .+.++|++++++|+.|++++.++++|.|++... ...+.||++
T Consensus 101 ~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i 179 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179 (288)
T ss_dssp HHHHSCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred HHhcCCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 999999999999999876 5566 66 889999999999999999999999999754321 014689999
Q ss_pred cCCccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CC-CCHH
Q psy616 375 SSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KV-LHEN 452 (1152)
Q Consensus 375 SS~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~-l~~~ 452 (1152)
||+++..+.+++..|+++|+++..|++.++.+.. ..++++.+|.+|... +.| ...............+ +. .+|+
T Consensus 180 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-t~~-~~~~~~~~~~~~~~p~~r~~~~pe 255 (288)
T 2x9g_A 180 CDAMVDQPCMAFSLYNMGKHALVGLTQSAALELA--PYGIRVNGVAPGVSL-LPV-AMGEEEKDKWRRKVPLGRREASAE 255 (288)
T ss_dssp CCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSCS-CCT-TSCHHHHHHHHHTCTTTSSCCCHH
T ss_pred ecccccCCCCCCchHHHHHHHHHHHHHHHHHHhh--ccCeEEEEEEecccc-Ccc-ccChHHHHHHHhhCCCCCCCCCHH
Confidence 9999999999999999999999999999887643 335688899887664 445 2111111111222222 23 6899
Q ss_pred HHHHHHHHHHhcC----ceeeeeechhh
Q psy616 453 DGLKLFEQLLIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 453 e~~~~l~~~l~~~----~~~~~v~~~~~ 476 (1152)
+..+.+..++... ..+.+.+++.+
T Consensus 256 dvA~~v~~l~s~~~~~itG~~i~vdGG~ 283 (288)
T 2x9g_A 256 QIADAVIFLVSGSAQYITGSIIKVDGGL 283 (288)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhCccccCccCCEEEECcch
Confidence 9999999888643 22455555543
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=8.8e-23 Score=233.77 Aligned_cols=237 Identities=12% Similarity=0.001 Sum_probs=182.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHH-hCCCcEEEEEecCCCHH--------------
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLK-KFNNKAIYIQVDVSDKL-------------- 298 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~-~~g~~v~~~~~Dvsd~~-------------- 298 (1152)
.++++|||||++|||+++|+.|+++|++++++..|+. ..+++.++++ ..+.++.++++|++|.+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 124 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT 124 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccc
Confidence 5789999999999999999999999985444442653 3455556665 55778999999999999
Q ss_pred ---HHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCC--------------HHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy616 299 ---KMISEINSIINNIGPIDGVLHIAGISGLTSNILEAN--------------YKNFYSVLSSKISGTIALNYALENTIL 361 (1152)
Q Consensus 299 ---~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~--------------~e~~~~~~~~kv~g~~~L~~~~~p~m~ 361 (1152)
+++++++++.+++|+||+||||||+.. ..++.+.+ .++|++++++|+.|++++.++++|.|+
T Consensus 125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 125 LFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999877 67778888 999999999999999999999999986
Q ss_pred Hhc---CCCCCEEEEecCCccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch
Q psy616 362 KLQ---KNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD 438 (1152)
Q Consensus 362 ~~~---~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~ 438 (1152)
+.. ....+.||++||+++..+.+++..|+++|+++.+|++.++.+.. ..++++.+|.+|... +.| ........
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrvn~v~PG~v~-T~~-~~~~~~~~ 279 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA--PLQIRVNGVGPGLSV-LVD-DMPPAVWE 279 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBS-CCC-CSCHHHHH
T ss_pred hcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHh--hcCcEEEEEecCccc-CCc-cccHHHHH
Confidence 532 01147899999999999999999999999999999999887743 335688889887664 455 22111111
Q ss_pred hHHhhcCC--CCCCHHHHHHHHHHHHhcC----ceeeeeechhh
Q psy616 439 FYFKSSKQ--KVLHENDGLKLFEQLLIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 439 ~~~~~~g~--~~l~~~e~~~~l~~~l~~~----~~~~~v~~~~~ 476 (1152)
.......+ +..+|+|..+++..++... ..+.+.+++.+
T Consensus 280 ~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 323 (328)
T 2qhx_A 280 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 323 (328)
T ss_dssp HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 11121222 4578999999999888542 23555555543
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.9e-23 Score=225.47 Aligned_cols=219 Identities=16% Similarity=0.178 Sum_probs=176.3
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCC-CcEEEEEecC--CCHHHHHHHHHHHHh
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFN-NKAIYIQVDV--SDKLKMISEINSIIN 309 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g-~~v~~~~~Dv--sd~~~v~~~~~~~~~ 309 (1152)
-+++++|||||++|||+++|++|+++|++ |++++|+ +..++..++++..+ .++.++.+|+ +|.++++++++++.+
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGAS-VVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999985 5666666 44556667777665 5677777777 999999999999999
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
.+|+||+||||||+.....++.+.+.++|++++++|+.|++++.++++|+|++ ...++||++||..+..+.++...|
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~~Y 167 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKR---SEDASIAFTSSSVGRKGRANWGAY 167 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---SSSEEEEEECCGGGTSCCTTCHHH
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---CCCCeEEEEcchhhcCCCCCcchh
Confidence 99999999999998643578899999999999999999999999999999753 345789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++|+++++|++.++.+.. ...++++.+|.+|... +.|...... ........+|+|..+.+..++..
T Consensus 168 ~~sK~a~~~~~~~la~e~~-~~~~i~v~~v~PG~v~-t~~~~~~~~------~~~~~~~~~p~dva~~~~~l~s~ 234 (247)
T 3i1j_A 168 GVSKFATEGLMQTLADELE-GVTAVRANSINPGATR-TGMRAQAYP------DENPLNNPAPEDIMPVYLYLMGP 234 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TTSSEEEEEEECCCCS-SHHHHHHST------TSCGGGSCCGGGGTHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccc-Cccchhccc------ccCccCCCCHHHHHHHHHHHhCc
Confidence 9999999999999987642 1146788899887664 444321110 01112346789998888887754
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.2e-23 Score=228.75 Aligned_cols=235 Identities=15% Similarity=0.067 Sum_probs=176.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecC-C-cchHHHHHHHHhC-CCcEEEEEecCCCH----HHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR-S-KLNSIIYKKLKKF-NNKAIYIQVDVSDK----LKMISEINSI 307 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R-~-~~~~~~~~~l~~~-g~~v~~~~~Dvsd~----~~v~~~~~~~ 307 (1152)
.++++|||||+||||+++|+.|+++|++ |++++| + +..+++.++++.. +.++.++.+|++|. ++++++++++
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFR-VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 4789999999999999999999999985 555555 4 3345555666654 67899999999999 9999999999
Q ss_pred HhhcCCeeEEEEcccccCcCcccccCCH-----------HHHHHHHhhhchHHHHHHHHHHHHHHHhcC---CCCCEEEE
Q psy616 308 INNIGPIDGVLHIAGISGLTSNILEANY-----------KNFYSVLSSKISGTIALNYALENTILKLQK---NKLDFVCY 373 (1152)
Q Consensus 308 ~~~~G~idgvIh~AG~~~~~~~~~~~~~-----------e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~---~~~~~iV~ 373 (1152)
.+++|++|+||||||+.. ..++.+.+. ++|++++++|+.|++++.++++|+|+ ... ...+.||+
T Consensus 89 ~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv~ 166 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVVN 166 (276)
T ss_dssp HHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEE
T ss_pred HHhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEEE
Confidence 999999999999999877 667778888 99999999999999999999999874 111 11268999
Q ss_pred ecCCccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-C-CCCH
Q psy616 374 FSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-K-VLHE 451 (1152)
Q Consensus 374 ~SS~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~-~l~~ 451 (1152)
+||+++..+.+++..|+++|++++.|++.++.+.. ..++++.+|.+|..... ... .............+ + ..++
T Consensus 167 isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~gi~v~~v~PG~v~t~-~~~-~~~~~~~~~~~~p~~r~~~~~ 242 (276)
T 1mxh_A 167 LCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELA--PRHIRVNAVAPGLSLLP-PAM-PQETQEEYRRKVPLGQSEASA 242 (276)
T ss_dssp ECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBSCC-SSS-CHHHHHHHHTTCTTTSCCBCH
T ss_pred ECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHh--hcCeEEEEEecCcccCC-ccC-CHHHHHHHHhcCCCCCCCCCH
Confidence 99999999999999999999999999999887643 33568889998877543 111 01111111111222 2 5789
Q ss_pred HHHHHHHHHHHhcCc----eeeeeechhh
Q psy616 452 NDGLKLFEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 452 ~e~~~~l~~~l~~~~----~~~~v~~~~~ 476 (1152)
++..+.+..++.... .+.+.+++.+
T Consensus 243 ~dva~~v~~l~s~~~~~~tG~~~~vdgG~ 271 (276)
T 1mxh_A 243 AQIADAIAFLVSKDAGYITGTTLKVDGGL 271 (276)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHhCccccCccCcEEEECCch
Confidence 999999988876432 3455555543
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.9e-23 Score=227.00 Aligned_cols=221 Identities=16% Similarity=0.149 Sum_probs=157.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|++|+++|++ |++++|+ +..++..++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAA-VVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999985 5555665 4456677778888889999999999999999999999999999
Q ss_pred eeEEEEcccccC--cCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 314 IDGVLHIAGISG--LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~--~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
+|+||||||+.. ...++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||.++. .+...|++
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~---~~~~~Y~a 160 (253)
T 3qiv_A 87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR---GGGAIVNQSSTAAW---LYSNYYGL 160 (253)
T ss_dssp CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEECC--------------C
T ss_pred CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc---CCCEEEEECCcccc---CCCchhHH
Confidence 999999999842 14567789999999999999999999999999998764 34679999999876 46678999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc--cchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+|++++.|++.++.+.. ..++++.+|.+|.... .|...... ......+...+ +..+++|..+.+..++...
T Consensus 161 sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~ 234 (253)
T 3qiv_A 161 AKVGINGLTQQLSRELG--GRNIRINAIAPGPIDT-EANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDE 234 (253)
T ss_dssp CHHHHHHHHHHHHHHTT--TTTEEEEEEEC--------------------------------CCHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHh--hcCeEEEEEEecCCcc-cchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCcc
Confidence 99999999999988753 3467889999887754 33221111 01111111111 2356888998888877543
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.6e-23 Score=227.75 Aligned_cols=226 Identities=11% Similarity=0.122 Sum_probs=177.4
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++|++|||||++|||+++|+.|+++|++ |++++|+.... ...+.++++|++|+++++++++++.+++|+
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAK-VVSVSLDEKSD---------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGR 81 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCC--C---------TTSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCchhc---------cCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999985 55556654211 124678899999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.++++.|+++|
T Consensus 82 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK 157 (269)
T 3vtz_A 82 IDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI---GHGSIINIASVQSYAATKNAAAYVTSK 157 (269)
T ss_dssp CCEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCCEEEEECchhhccCCCCChhHHHHH
Confidence 999999999987 7788999999999999999999999999999998754 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhhcCC-CCCCHHHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQ-KVLHENDGLKLFEQ 460 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~-~~l~~~e~~~~l~~ 460 (1152)
+++++|++.++.+.. . ++++.+|.+|... +.|.... ............+ +..+++|..+++..
T Consensus 158 aa~~~l~~~la~e~~--~-~i~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~ 233 (269)
T 3vtz_A 158 HALLGLTRSVAIDYA--P-KIRCNAVCPGTIM-TPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAF 233 (269)
T ss_dssp HHHHHHHHHHHHHHT--T-TEEEEEEEECSBC-CHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc--C-CCEEEEEEECCCc-CcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 999999999988753 2 5788899888765 3432110 0000111111122 34689999999988
Q ss_pred HHhcCc----eeeeeechhhh
Q psy616 461 LLIQDK----IQYLVLSGELE 477 (1152)
Q Consensus 461 ~l~~~~----~~~~v~~~~~~ 477 (1152)
++.... .+.+.+++.+.
T Consensus 234 L~s~~~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 234 LASDRSSFITGACLTVDGGLL 254 (269)
T ss_dssp HHSGGGTTCCSCEEEESTTGG
T ss_pred HhCCccCCCcCcEEEECCCcc
Confidence 876432 35666666543
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=228.03 Aligned_cols=222 Identities=16% Similarity=0.185 Sum_probs=177.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|+. |++++|+. ..++..++++..+.++.++.+|++|.++++++++++.+.+|+
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSH-VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSE-EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999985 44466653 345566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..+.||++||.++..+.+++..|+++|
T Consensus 122 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~asK 197 (285)
T 2c07_A 122 VDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN---RYGRIINISSIVGLTGNVGQANYSSSK 197 (285)
T ss_dssp CCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH---TCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC---CCCEEEEECChhhccCCCCCchHHHHH
Confidence 999999999987 6788899999999999999999999999999998653 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++.+|.+|.+.. .|........ ........ -...++++..+.+..++..
T Consensus 198 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~ 267 (285)
T 2c07_A 198 AGVIGFTKSLAKELA--SRNITVNAIAPGFISS-DMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSD 267 (285)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBCC------CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHH--HhCcEEEEEEeCcEec-CchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999998877643 2356888999887753 3432211111 11111111 1357899999999888764
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=227.01 Aligned_cols=233 Identities=13% Similarity=0.104 Sum_probs=171.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHH---HhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKL---KKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l---~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+ +..++..+++ ...+.++.++.+|++|+++++++++++.++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAK-VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999984 5555665 3344555555 333567999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCcccccC----CHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcc-ccCCCC
Q psy616 311 IGPIDGVLHIAGISGLTSNILEA----NYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA-ILGDFG 385 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~----~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~-~~g~~g 385 (1152)
+|++|+||||||+.. ..++.+. +.++|++++++|+.|++++.+++.|.|++. . +.||++||+++ ..+.++
T Consensus 84 ~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~-g~iv~isS~~~~~~~~~~ 158 (278)
T 1spx_A 84 FGKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST---K-GEIVNISSIASGLHATPD 158 (278)
T ss_dssp HSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---T-CEEEEECCTTSSSSCCTT
T ss_pred cCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---C-CeEEEEecccccccCCCC
Confidence 999999999999876 5667777 999999999999999999999999998653 2 68999999999 889999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc----ccc------chhHHhhcC-CCCCCHHHH
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN----NEQ------TDFYFKSSK-QKVLHENDG 454 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~----~~~------~~~~~~~~g-~~~l~~~e~ 454 (1152)
...|+++|++++.|++.++.+.. ..++++.+|.+|... +.|.... ... ......... -+..++++.
T Consensus 159 ~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv 235 (278)
T 1spx_A 159 FPYYSIAKAAIDQYTRNTAIDLI--QHGIRVNSISPGLVA-TGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDI 235 (278)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-CCC--------------HHHHHHHHHHCTTSSCBCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHH--hcCcEEEEEecCccc-CccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHH
Confidence 99999999999999999887643 335688899988775 3342211 000 011111111 135789999
Q ss_pred HHHHHHHHhcC-----ceeeeeechhh
Q psy616 455 LKLFEQLLIQD-----KIQYLVLSGEL 476 (1152)
Q Consensus 455 ~~~l~~~l~~~-----~~~~~v~~~~~ 476 (1152)
.+++..++..+ ..+.+.+++.+
T Consensus 236 A~~v~~l~s~~~~~~~tG~~~~vdgG~ 262 (278)
T 1spx_A 236 AEVIAFLADRKTSSYIIGHQLVVDGGS 262 (278)
T ss_dssp HHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred HHHHHHHcCccccCcccCcEEEECCCc
Confidence 99988877532 13455555543
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-22 Score=223.05 Aligned_cols=229 Identities=11% Similarity=0.135 Sum_probs=176.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++|+.|+++|+ +|++++|+...++..+++. + .++++|++|+++++++++++.+++|++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALGRV 78 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999998 4555666643344444443 4 788999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..+.||++||+++..+.++...|+++|+
T Consensus 79 D~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 154 (256)
T 2d1y_A 79 DVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV---GGGAIVNVASVQGLFAEQENAAYNASKG 154 (256)
T ss_dssp CEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT---TCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEEccccccCCCCCChhHHHHHH
Confidence 99999999887 6778899999999999999999999999999998642 3578999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc-------ccccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC-
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-------NNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD- 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-------~~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~- 465 (1152)
+++.|++.++.+.. ..++++.+|.+|... +.|... ............. -+..+++|..+++..++...
T Consensus 155 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~ 231 (256)
T 2d1y_A 155 GLVNLTRSLALDLA--PLRIRVNAVAPGAIA-TEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKA 231 (256)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHh--hcCeEEEEEeeCCcc-CchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999887643 335688888887664 333211 0111111111111 13578999999998887653
Q ss_pred ---ceeeeeechhh
Q psy616 466 ---KIQYLVLSGEL 476 (1152)
Q Consensus 466 ---~~~~~v~~~~~ 476 (1152)
..+.+.+++.+
T Consensus 232 ~~~~G~~~~v~gG~ 245 (256)
T 2d1y_A 232 SFITGAILPVDGGM 245 (256)
T ss_dssp TTCCSCEEEESTTG
T ss_pred cCCCCCEEEECCCc
Confidence 23455555543
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=223.32 Aligned_cols=227 Identities=13% Similarity=0.150 Sum_probs=177.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+. ..++..+++ ..++.++.+|++|+++++++++++.+++|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 81 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAK-VVFGDILDEEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAFGG 81 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHh---hcCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999985 55566653 223333333 235889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||.++..+.++...|+++|
T Consensus 82 iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK 157 (260)
T 1nff_A 82 LHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA---GRGSIINISSIEGLAGTVACHGYTATK 157 (260)
T ss_dssp CCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCCEEEEEeehhhcCCCCCchhHHHHH
Confidence 999999999987 6778899999999999999999999999999998754 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcC-CCCCCHHHHHHHHHHHHhcCc----ee
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQDK----IQ 468 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~~----~~ 468 (1152)
++++.|++.++.+.. ..++++.+|.+|.... .|.. ... .... ... -+..++++..+++..++.... .+
T Consensus 158 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~-~~~--~~~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~ 230 (260)
T 1nff_A 158 FAVRGLTKSTALELG--PSGIRVNSIHPGLVKT-PMTD-WVP--EDIF-QTALGRAAEPVEVSNLVVYLASDESSYSTGA 230 (260)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBCS-GGGT-TSC--TTCS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhC--ccCcEEEEEEeCCCCC-Cccc-cch--hhHH-hCccCCCCCHHHHHHHHHHHhCccccCCcCC
Confidence 999999999887643 2356888898876643 3321 100 0000 111 134689999999988875432 34
Q ss_pred eeeechhh
Q psy616 469 YLVLSGEL 476 (1152)
Q Consensus 469 ~~v~~~~~ 476 (1152)
.+.+++.+
T Consensus 231 ~~~v~gG~ 238 (260)
T 1nff_A 231 EFVVDGGT 238 (260)
T ss_dssp EEEESTTG
T ss_pred EEEECCCe
Confidence 55555543
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.4e-23 Score=225.82 Aligned_cols=231 Identities=14% Similarity=0.190 Sum_probs=172.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||++|||+++|+.|+++|+++ +++.|+. ++. .+..+.++.++++|++|+++++++++.+.+ +|+|
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V-~~~~r~~--~~~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~i 80 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQV-VVLDIRG--EDV---VADLGDRARFAAADVTDEAAVASALDLAET-MGTL 80 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEE-EEEESSC--HHH---HHHTCTTEEEEECCTTCHHHHHHHHHHHHH-HSCE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEE-EEEeCch--HHH---HHhcCCceEEEECCCCCHHHHHHHHHHHHH-hCCC
Confidence 57899999999999999999999999854 4455532 222 233477899999999999999999999877 9999
Q ss_pred eEEEEcccccCcCccc----ccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhc-----CCCCCEEEEecCCccccCCCC
Q psy616 315 DGVLHIAGISGLTSNI----LEANYKNFYSVLSSKISGTIALNYALENTILKLQ-----KNKLDFVCYFSSSSAILGDFG 385 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~----~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~-----~~~~~~iV~~SS~a~~~g~~g 385 (1152)
|+||||||+.. ...+ .+.+.++|++++++|+.|++++.++++|+|++.. ....+.||++||+++..+.++
T Consensus 81 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 159 (257)
T 3tl3_A 81 RIVVNCAGTGN-AIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIG 159 (257)
T ss_dssp EEEEECGGGSH-HHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHH
T ss_pred CEEEECCCCCC-CcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCC
Confidence 99999999865 3333 3589999999999999999999999999986421 134578999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchh-HHhhcC--CCCCCHHHHHHHHHHHH
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF-YFKSSK--QKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~-~~~~~g--~~~l~~~e~~~~l~~~l 462 (1152)
+..|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|.......... ...... -+..+|+|..+++..++
T Consensus 160 ~~~Y~asKaa~~~~~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~ 236 (257)
T 3tl3_A 160 QAAYSASKGGVVGMTLPIARDLA--SHRIRVMTIAPGLFD-TPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHII 236 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHhc--ccCcEEEEEEecCcc-ChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHh
Confidence 99999999999999999887754 345688899888764 4454322221111 111111 23568999999999888
Q ss_pred hcC--ceeeeeechhh
Q psy616 463 IQD--KIQYLVLSGEL 476 (1152)
Q Consensus 463 ~~~--~~~~~v~~~~~ 476 (1152)
..+ ..+.+.+++.+
T Consensus 237 s~~~itG~~i~vdGG~ 252 (257)
T 3tl3_A 237 ENPMLNGEVIRLDGAI 252 (257)
T ss_dssp HCTTCCSCEEEESTTC
T ss_pred cCCCCCCCEEEECCCc
Confidence 753 23555555543
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-22 Score=226.15 Aligned_cols=233 Identities=11% Similarity=-0.016 Sum_probs=182.3
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+ +|||+++|+.|+++|+ +|++++|+. .++..+++.+.+.++.+++||++|.++++++++++.+++|
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD 102 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTT-CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCch-HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence 57999999988 7899999999999998 566666666 4556667766666788999999999999999999999999
Q ss_pred CeeEEEEcccccCc---Cccccc-CCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 313 PIDGVLHIAGISGL---TSNILE-ANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~-~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
+||+||||||+... ...+.+ .+.++|++++++|+.|++++.+++.|+|++. .+.||++||.++..+.+++..
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~g~iv~isS~~~~~~~~~~~~ 178 (280)
T 3nrc_A 103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR----NASMVALTYIGAEKAMPSYNT 178 (280)
T ss_dssp SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT----TCEEEEEECGGGTSCCTTTHH
T ss_pred CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCeEEEEeccccccCCCCchh
Confidence 99999999998752 144555 8999999999999999999999999997532 578999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|+++++|++.++.+.. ..++++.+|.+|... +.|....... ......... -+..+++|..+.+..++..
T Consensus 179 Y~asKaal~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~ 255 (280)
T 3nrc_A 179 MGVAKASLEATVRYTALALG--EDGIKVNAVSAGPIK-TLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSD 255 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCCC-CSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSG
T ss_pred hHHHHHHHHHHHHHHHHHHH--HcCcEEEEEeecccc-chhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999887654 335688899888775 4443322111 111111111 2357899999999887764
Q ss_pred Cc----eeeeeechhh
Q psy616 465 DK----IQYLVLSGEL 476 (1152)
Q Consensus 465 ~~----~~~~v~~~~~ 476 (1152)
.. .+.+.+++.+
T Consensus 256 ~~~~~tG~~i~vdgG~ 271 (280)
T 3nrc_A 256 MATGITGEVVHVDAGY 271 (280)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred ccCCcCCcEEEECCCc
Confidence 32 3555555554
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=224.15 Aligned_cols=231 Identities=12% Similarity=0.124 Sum_probs=177.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|++ |+++.|+.. .++..+++ +.++.++++|++|+++++++++++.+++|+
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAK-VAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999984 666677642 23333333 668999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++ .. ++||++||.++..+.+++..|+++|
T Consensus 81 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~-g~iv~isS~~~~~~~~~~~~Y~~sK 155 (253)
T 1hxh_A 81 LNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE---TG-GSIINMASVSSWLPIEQYAGYSASK 155 (253)
T ss_dssp CCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---TC-EEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHH---cC-CEEEEEcchhhcCCCCCCccHHHHH
Confidence 999999999976 678889999999999999999999999999999753 23 7899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc--ccccchh-HHh---hcC-CCCCCHHHHHHHHHHHHhcCc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG--NNEQTDF-YFK---SSK-QKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~--~~~~~~~-~~~---~~g-~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
++++.|++.++.+....+.++++.+|.+|.... .|... ....... ... ... -+..+|+|..+++..++....
T Consensus 156 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 234 (253)
T 1hxh_A 156 AAVSALTRAAALSCRKQGYAIRVNSIHPDGIYT-PMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES 234 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEEESEECC-HHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccC-chhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccc
Confidence 999999999887633111245888998887643 33211 0011111 111 111 134689999999998876432
Q ss_pred ----eeeeeechh
Q psy616 467 ----IQYLVLSGE 475 (1152)
Q Consensus 467 ----~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 235 ~~~tG~~~~vdgG 247 (253)
T 1hxh_A 235 SVMSGSELHADNS 247 (253)
T ss_dssp TTCCSCEEEESSS
T ss_pred cCCCCcEEEECCC
Confidence 345555544
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-22 Score=220.29 Aligned_cols=232 Identities=15% Similarity=0.154 Sum_probs=179.0
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l-~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++|||||+||||++++++|+++|+ +|++++|+. ..++..+++ +..+.++.++.+|++|+++++++++++.+++|+
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 57999999999999999999999997 566666663 334445555 445678999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcc---cccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 314 IDGVLHIAGISGLTSN---ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~---~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
+|+||||||+.. ..+ +.+.+.++|++++++|+.|++++.+.++|.|++. ..++||++||.++..+.+++..|+
T Consensus 81 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~ 156 (250)
T 2cfc_A 81 IDVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ---GAGVIVNIASVASLVAFPGRSAYT 156 (250)
T ss_dssp CCEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHHHH
T ss_pred CCEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC---CCCEEEEECChhhccCCCCchhHH
Confidence 999999999876 455 7889999999999999999999999999998754 346799999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc-cc--ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-NN--EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~~--~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~ 466 (1152)
++|++++.|++.++.+.. ..++++.+|.+|.... .|... .. ...........+ ...++++..+.+..++..+.
T Consensus 157 ~sK~a~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 233 (250)
T 2cfc_A 157 TSKGAVLQLTKSVAVDYA--GSGIRCNAVCPGMIET-PMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDA 233 (250)
T ss_dssp HHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBCS-TTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHHhc--ccCeEEEEEEeCcCcc-CccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 999999999999887643 2356888898887654 33221 00 001111111111 24589999999988876432
Q ss_pred ----eeeeeechh
Q psy616 467 ----IQYLVLSGE 475 (1152)
Q Consensus 467 ----~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 234 ~~~~G~~~~v~gG 246 (250)
T 2cfc_A 234 TYVNGAALVMDGA 246 (250)
T ss_dssp TTCCSCEEEESTT
T ss_pred hcccCCEEEECCc
Confidence 344444443
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-22 Score=225.45 Aligned_cols=222 Identities=14% Similarity=0.148 Sum_probs=174.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|++|+++|++ |+++.|+. ..++.. +..+.++.++.+|++|.++++++++++.+++|+
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDT-VIGTARRTEALDDLV---AAYPDRAEAISLDVTDGERIDVVAADVLARYGR 79 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSGGGGHHHH---HHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHH---HhccCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999985 55555553 333333 344678999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++. ..++||++||+++..+.+++..|+++|
T Consensus 80 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK 155 (281)
T 3m1a_A 80 VDVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGPARLTRALLPQMRER---GSGSVVNISSFGGQLSFAGFSAYSATK 155 (281)
T ss_dssp CSEEEECCCCEE-ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEEcCccccCCCCCchHHHHHH
Confidence 999999999987 6788899999999999999999999999999998764 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-------cc-ch------hHH-hhcCCCCCCHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-------EQ-TD------FYF-KSSKQKVLHENDGLKLF 458 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-------~~-~~------~~~-~~~g~~~l~~~e~~~~l 458 (1152)
++++.|++.++.+.. ..++++.+|.+|.... .|..... .. .. ... ...+.....+++.++++
T Consensus 156 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~ 232 (281)
T 3m1a_A 156 AALEQLSEGLADEVA--PFGIKVLIVEPGAFRT-NLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAI 232 (281)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBCC-TTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh--ccCcEEEEEecCcccc-ccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHH
Confidence 999999999887643 2356888888876643 2311100 00 00 000 01223457899999999
Q ss_pred HHHHhcCce
Q psy616 459 EQLLIQDKI 467 (1152)
Q Consensus 459 ~~~l~~~~~ 467 (1152)
..++..+.+
T Consensus 233 ~~~~~~~~~ 241 (281)
T 3m1a_A 233 RLALDTEKT 241 (281)
T ss_dssp HHHHHSSSC
T ss_pred HHHHhCCCC
Confidence 888876644
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=224.57 Aligned_cols=222 Identities=15% Similarity=0.065 Sum_probs=178.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC-
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG- 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G- 312 (1152)
+++++|||||++|||+++|++|+++|+.++++.+|+. ..++..++++..+.++.++.+|++|.++++++++++.+.++
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 5799999999999999999999999997777666664 44566777888888999999999999999999999987764
Q ss_pred -----CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 313 -----PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 313 -----~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
+||+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|+|+ +.++||++||.++..+.+++.
T Consensus 86 ~~~~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~~ 159 (255)
T 3icc_A 86 RTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR-----DNSRIINISSAATRISLPDFI 159 (255)
T ss_dssp HHSSSCEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE-----EEEEEEEECCGGGTSCCTTBH
T ss_pred cccCCcccEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC-----CCCEEEEeCChhhccCCCCcc
Confidence 5999999999987 77889999999999999999999999999988752 235799999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc--hhHH-hhcC-CCCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT--DFYF-KSSK-QKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~--~~~~-~~~g-~~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|+++++|++.++.+.. ..++++.+|.+|... +.|........ .... .... .+..+++|..+.+..++.
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 236 (255)
T 3icc_A 160 AYSMTKGAINTMTFTLAKQLG--ARGITVNAILPGFVK-TDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLAS 236 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-CSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS
T ss_pred hhHHhHHHHHHHHHHHHHHHH--hcCeEEEEEEEeeec-ccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhC
Confidence 999999999999999987753 335688888887664 45543321111 1111 1111 234689999999888775
Q ss_pred cC
Q psy616 464 QD 465 (1152)
Q Consensus 464 ~~ 465 (1152)
..
T Consensus 237 ~~ 238 (255)
T 3icc_A 237 PD 238 (255)
T ss_dssp GG
T ss_pred cc
Confidence 43
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-22 Score=224.49 Aligned_cols=229 Identities=15% Similarity=0.171 Sum_probs=175.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++.. +..+.++.+|++|+++++++++ ++
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~ 83 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGAN-VLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----KY 83 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----HC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----hc
Confidence 5799999999999999999999999985 5555565 4445666677655 4678899999999998877654 57
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. +.+.||++||.++..+.++...|++
T Consensus 84 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~a 159 (267)
T 3t4x_A 84 PKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER---KEGRVIFIASEAAIMPSQEMAHYSA 159 (267)
T ss_dssp CCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCCEEEEEcchhhccCCCcchHHHH
Confidence 99999999999987 6788999999999999999999999999999998653 3467999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhh-cC----CCCCCHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKS-SK----QKVLHENDG 454 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~-~g----~~~l~~~e~ 454 (1152)
+|+++++|++.++.+.. ..++++.+|.+|..... |.... .......+.. .. -+..+|+|.
T Consensus 160 sKaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv 236 (267)
T 3t4x_A 160 TKTMQLSLSRSLAELTT--GTNVTVNTIMPGSTLTE-GVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEI 236 (267)
T ss_dssp HHHHHHHHHHHHHHHTT--TSEEEEEEEEECCBCCH-HHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHH
T ss_pred HHHHHHHHHHHHHHHhC--CCCeEEEEEeCCeecCc-cHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHH
Confidence 99999999999987643 34568888888876532 21100 0000111111 11 235678999
Q ss_pred HHHHHHHHhcCc----eeeeeechh
Q psy616 455 LKLFEQLLIQDK----IQYLVLSGE 475 (1152)
Q Consensus 455 ~~~l~~~l~~~~----~~~~v~~~~ 475 (1152)
.+++..++.... .+.+.+++.
T Consensus 237 A~~v~fL~s~~~~~itG~~i~vdGG 261 (267)
T 3t4x_A 237 AHLVTFLSSPLSSAINGSALRIDGG 261 (267)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHcCccccCccCCeEEECCC
Confidence 998888775432 355555554
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=231.58 Aligned_cols=184 Identities=18% Similarity=0.114 Sum_probs=156.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC------cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
+++++|||||+||||+++|+.|+++|+++++. .|+ +..+++.+.++..+.++.++.+|++|+++++++++++.
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~-~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYAS-MRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-ESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEe-cCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 36899999999999999999999999865544 333 12233444455667889999999999999999999999
Q ss_pred hhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-CCCCh
Q psy616 309 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-DFGSC 387 (1152)
Q Consensus 309 ~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g-~~g~~ 387 (1152)
+++|+||+||||||+.. .+++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+ .++.+
T Consensus 83 ~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~---~~g~iV~isS~~~~~~~~~~~~ 158 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ---KHGLLIWISSSSSAGGTPPYLA 158 (324)
T ss_dssp HHHSCCSEEEECCCCCB-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCCSSCH
T ss_pred HHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCEEEEEecchhccCCCCcch
Confidence 99999999999999987 7889999999999999999999999999999998764 3467999999999865 47789
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
.|+++|+++++|++.++.+.. ..++++.+|.+|.+.
T Consensus 159 ~Y~asKaa~~~~~~~la~el~--~~gI~v~~v~PG~v~ 194 (324)
T 3u9l_A 159 PYFAAKAAMDAIAVQYARELS--RWGIETSIIVPGAFT 194 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TTTEEEEEEEECCC-
T ss_pred hHHHHHHHHHHHHHHHHHHhh--hhCcEEEEEECCccc
Confidence 999999999999999987743 345688999988774
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=9.7e-23 Score=226.11 Aligned_cols=229 Identities=18% Similarity=0.217 Sum_probs=174.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++|+.|+++|+ +|++++|+.. ...+..+..+.++.++++|++|+++++++++++.+++|++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREER--LLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL 81 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHH--HHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHH--HHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999998 5666666642 1222223334678999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.| + . .+.||++||+++. +.+++..|+++|+
T Consensus 82 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~---~-~g~iv~isS~~~~-~~~~~~~Y~asK~ 154 (263)
T 2a4k_A 82 HGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-E---E-GGSLVLTGSVAGL-GAFGLAHYAAGKL 154 (263)
T ss_dssp CEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-C---T-TCEEEEECCCTTC-CHHHHHHHHHCSS
T ss_pred cEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-h---c-CCEEEEEecchhc-CCCCcHHHHHHHH
Confidence 99999999987 6788899999999999999999999999999986 2 1 5789999999998 8888999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcC-CCCCCHHHHHHHHHHHHhcC----cee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQD----KIQ 468 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~----~~~ 468 (1152)
+++.|++.++.+.. ..++++.+|.+|... +.|....... ......... -+..+++|..+.+..++... ..+
T Consensus 155 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~ 231 (263)
T 2a4k_A 155 GVVGLARTLALELA--RKGVRVNVLLPGLIQ-TPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ 231 (263)
T ss_dssp HHHHHHHHHHHHHT--TTTCEEEEEEECSBC-CGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHhh--hhCcEEEEEEeCcCc-CchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCC
Confidence 99999999887643 345688889887664 4443221111 111111111 23578999999999888643 235
Q ss_pred eeeechhh
Q psy616 469 YLVLSGEL 476 (1152)
Q Consensus 469 ~~v~~~~~ 476 (1152)
.+.+++.+
T Consensus 232 ~i~vdgG~ 239 (263)
T 2a4k_A 232 ALYVDGGR 239 (263)
T ss_dssp EEEESTTT
T ss_pred EEEECCCc
Confidence 56666654
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=221.08 Aligned_cols=225 Identities=14% Similarity=0.134 Sum_probs=177.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC--cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~--~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+||||++++++|+++|++ |+++.|+ +..++..++++..+.++.++.+|++|+++++++++++.+++|
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAK-VGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999985 4545554 445666677777788899999999999999999999999999
Q ss_pred CeeEEEEcccc-cCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhc--CCCCCEEEEecCCcccc-CCCCChh
Q psy616 313 PIDGVLHIAGI-SGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQ--KNKLDFVCYFSSSSAIL-GDFGSCD 388 (1152)
Q Consensus 313 ~idgvIh~AG~-~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~--~~~~~~iV~~SS~a~~~-g~~g~~~ 388 (1152)
++|+||||||+ .. ..++.+.+.++|++++++|+.|++++.++++|.|.+.. ....+.||++||+.+.. +.++...
T Consensus 85 ~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~ 163 (258)
T 3afn_B 85 GIDVLINNAGGLVG-RKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGL 163 (258)
T ss_dssp SCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHH
T ss_pred CCCEEEECCCCcCC-cCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchH
Confidence 99999999998 54 66788999999999999999999999999999987543 22336899999999988 8899999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|++++.|++.++.+.. ..++++.+|.+|.... .|....... .....+... .....+++..+.+..++..
T Consensus 164 Y~~sK~a~~~~~~~~~~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 238 (258)
T 3afn_B 164 YGAAKAFLHNVHKNWVDFHT--KDGVRFNIVSPGTVDT-AFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASH 238 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBSS-GGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHhhc--ccCeEEEEEeCCCccc-ccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCc
Confidence 99999999999998876632 2345888888876643 343221111 111111111 1356889999988887754
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.8e-22 Score=219.75 Aligned_cols=233 Identities=17% Similarity=0.227 Sum_probs=175.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|++|+++|+.+ +++.|+ +..++..+++ +.++.++.+|++|+++++++++++.+++|+
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V-~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASA-VLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEE-EEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEE-EEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 57899999999999999999999999854 445554 4444444444 667999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccc------cCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcC---CCCCEEEEecCCccccCCC
Q psy616 314 IDGVLHIAGISGLTSNIL------EANYKNFYSVLSSKISGTIALNYALENTILKLQK---NKLDFVCYFSSSSAILGDF 384 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~------~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~---~~~~~iV~~SS~a~~~g~~ 384 (1152)
+|+||||||+.. ...+. +.+.++|++++++|+.|++++.+++.|.|++... ...++||++||.++..+.+
T Consensus 87 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 165 (265)
T 2o23_A 87 VDVAVNCAGIAV-ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV 165 (265)
T ss_dssp CCEEEECCCCCC-CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred CCEEEECCccCC-CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCC
Confidence 999999999876 44443 4789999999999999999999999999754311 1457899999999999999
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC--CCCCCHHHHHHHHHHH
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK--QKVLHENDGLKLFEQL 461 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g--~~~l~~~e~~~~l~~~ 461 (1152)
++..|+++|++++.|++.++.+.. ..++++.+|.+|... +.|........ ........ -+..++++..+.+..+
T Consensus 166 ~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 242 (265)
T 2o23_A 166 GQAAYSASKGGIVGMTLPIARDLA--PIGIRVMTIAPGLFG-TPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAI 242 (265)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-CC----------CHHHHTCSSSCSCBCHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHh--hcCcEEEEEEecccc-CccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHH
Confidence 999999999999999998887643 235688889887664 44432211111 11111111 2456899999999988
Q ss_pred HhcCc--eeeeeechh
Q psy616 462 LIQDK--IQYLVLSGE 475 (1152)
Q Consensus 462 l~~~~--~~~~v~~~~ 475 (1152)
+.... .+.+.+++.
T Consensus 243 ~~~~~~~G~~i~vdgG 258 (265)
T 2o23_A 243 IENPFLNGEVIRLDGA 258 (265)
T ss_dssp HHCTTCCSCEEEESTT
T ss_pred hhcCccCceEEEECCC
Confidence 86432 245555544
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=226.64 Aligned_cols=222 Identities=15% Similarity=0.107 Sum_probs=181.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|++|+++|+. |+++.|+ +..++..++++..+.++.++.+|++|.++++++++++.+++|+
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 5799999999999999999999999985 5555665 3445566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++. ..+.||++||.++..+.+++..|+++|
T Consensus 109 iD~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~~sK 184 (272)
T 1yb1_A 109 VSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN---NHGHIVTVASAAGHVSVPFLLAYCSSK 184 (272)
T ss_dssp CSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred CcEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCCEEEEEechhhcCCCCCchhHHHHH
Confidence 999999999887 6778888999999999999999999999999998653 357899999999999888899999999
Q ss_pred HHHHHHHHHHHhcccc-cCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeee
Q psy616 394 RFQTVYAKYLNNKNIY-KKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYL 470 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~-~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~ 470 (1152)
++++.|++.++.+... +..++++.+|.+|.. ++.|... . . .. ....+++++.++.+..++..+...++
T Consensus 185 ~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v-~t~~~~~--~--~---~~-~~~~~~~~dva~~i~~~~~~~~~~~~ 253 (272)
T 1yb1_A 185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFV-NTGFIKN--P--S---TS-LGPTLEPEEVVNRLMHGILTEQKMIF 253 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHH-HHCSTTC--T--H---HH-HCCCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcc-cCCcccc--c--c---cc-ccCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 9999999988776321 123568889998755 4555321 0 0 11 12468999999999999987766543
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=223.85 Aligned_cols=220 Identities=13% Similarity=0.137 Sum_probs=171.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|+.|+++|+ +|+++.|+.. .++.. +....++.++++|++|+++++++++++.+++|+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVV---AGLENGGFAVEVDVTKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHH---HTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH---HHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999998 5666666642 22222 222336788999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++.. ..+.||++||.++..+.++...|+++|
T Consensus 87 iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (263)
T 3ak4_A 87 FDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASN--TKGVIVNTASLAAKVGAPLLAHYSASK 163 (263)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCeEEEEecccccccCCCCchhHHHHH
Confidence 999999999877 67888999999999999999999999999999986532 146899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----------cc-chhHHhhcC-CCCCCHHHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQ-TDFYFKSSK-QKVLHENDGLKLFEQ 460 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~-~~~~~~~~g-~~~l~~~e~~~~l~~ 460 (1152)
++++.|++.++.+.. ..++++.+|.+|... +.|..... .. ......... -+..+|+|..+++..
T Consensus 164 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~ 240 (263)
T 3ak4_A 164 FAVFGWTQALAREMA--PKNIRVNCVCPGFVK-TAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVF 240 (263)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECSBT-THHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh--HcCeEEEEEeccccc-ChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 999999999887643 235688888887664 33321100 00 011111111 135789999999988
Q ss_pred HHhc
Q psy616 461 LLIQ 464 (1152)
Q Consensus 461 ~l~~ 464 (1152)
++..
T Consensus 241 l~s~ 244 (263)
T 3ak4_A 241 LASD 244 (263)
T ss_dssp HHSG
T ss_pred HhCc
Confidence 8754
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-22 Score=222.51 Aligned_cols=234 Identities=12% Similarity=0.063 Sum_probs=182.6
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HhCCC-cEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNN-KAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l-~~~g~-~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
+++++|||||+ +|||+++|++|+++|++ |++++|++...+..+++ +..+. ++.+++||++|+++++++++++.++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGAR-LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 57899999999 66999999999999985 56667765544444444 34444 7899999999999999999999999
Q ss_pred cCCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 311 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
+|+||+||||||+... ...+.+.+.++|++++++|+.|++++.++++|+|+ +.++||++||+++..+.++++
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~ 159 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT-----EGGSIVTLTYLGGELVMPNYN 159 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT-----TCEEEEEEECGGGTSCCTTTH
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC-----CCceEEEEecccccccCCCcc
Confidence 9999999999998651 25678899999999999999999999999998863 246899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
.|+++|+++++|++.++.+.. ..++++.+|.+|... +.|....... .........+ +..++++..+.+..++.
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s 236 (266)
T 3oig_A 160 VMGVAKASLDASVKYLAADLG--KENIRVNSISAGPIR-TLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFS 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCCC-SGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHHh--hcCcEEEEEecCccc-ccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 999999999999999988754 345688889887765 4443322111 1111222222 35789999999998886
Q ss_pred cCc----eeeeeechhhh
Q psy616 464 QDK----IQYLVLSGELE 477 (1152)
Q Consensus 464 ~~~----~~~~v~~~~~~ 477 (1152)
... .+.+.+++.+.
T Consensus 237 ~~~~~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 237 DMSRGITGENLHVDSGFH 254 (266)
T ss_dssp GGGTTCCSCEEEESTTGG
T ss_pred CchhcCcCCEEEECCCeE
Confidence 532 46666666654
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=221.07 Aligned_cols=223 Identities=15% Similarity=0.182 Sum_probs=156.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|++|+++|++++++.+|++ ..++..++++..+.++.++.+|++|+++++++++++.+.+|+
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999986555546653 345566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..+.||++||.++..+.+++..|+++|
T Consensus 84 ~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK 159 (247)
T 2hq1_A 84 IDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ---KSGKIINITSIAGIIGNAGQANYAASK 159 (247)
T ss_dssp CCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHH---TCEEEEEECC---------CHHHHHHH
T ss_pred CCEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEcChhhccCCCCCcHhHHHH
Confidence 999999999876 6677888999999999999999999999999998654 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++.+|.+|... +.|........ ........ ....++++..+++..++..
T Consensus 160 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 229 (247)
T 2hq1_A 160 AGLIGFTKSIAKEFA--AKGIYCNAVAPGIIK-TDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASD 229 (247)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHH--HcCcEEEEEEEEEEe-ccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCc
Confidence 999999999877643 234588888877664 34422111111 11111111 2356899999998887754
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-22 Score=219.01 Aligned_cols=235 Identities=15% Similarity=0.130 Sum_probs=182.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecC-C-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR-S-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R-~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+||||++++++|+++|++ |+++.| + +..++..++++..+.++.++.+|++|+++++++++++.+++|
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAK-VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999985 555566 4 333455666777788899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++.. ..+.||++||+.+..+.++...|+++
T Consensus 85 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~~Y~~s 161 (261)
T 1gee_A 85 KLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND--IKGTVINMSSVHEKIPWPLFVHYAAS 161 (261)
T ss_dssp CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CCCEEEEeCCHHhcCCCCCccHHHHH
Confidence 9999999999887 67788999999999999999999999999999986532 14689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC---
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD--- 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~--- 465 (1152)
|++++.|++.++.+.. ..++++.+|.+|.+.. .|.... ............ -...++++..+.+..++...
T Consensus 162 K~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 238 (261)
T 1gee_A 162 KGGMKLMTETLALEYA--PKGIRVNNIGPGAINT-PINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238 (261)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBCS-GGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEeeCCcCC-chhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 9999999998877643 2356888898877643 332211 000111111111 13568999999998887642
Q ss_pred -ceeeeeechhh
Q psy616 466 -KIQYLVLSGEL 476 (1152)
Q Consensus 466 -~~~~~v~~~~~ 476 (1152)
..+.+.+++.+
T Consensus 239 ~~G~~~~v~gg~ 250 (261)
T 1gee_A 239 VTGITLFADGGM 250 (261)
T ss_dssp CCSCEEEESTTG
T ss_pred CCCcEEEEcCCc
Confidence 23455555544
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=223.11 Aligned_cols=233 Identities=12% Similarity=0.034 Sum_probs=178.3
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+ ||||+++|+.|+++|++ |+++.|+...++..+++......+.++++|++|+++++++++++.+++|
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCE-EEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999 99999999999999985 6666676544455556654323478899999999999999999999999
Q ss_pred CeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 313 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
++|+||||||+... ..++.+.+.++|++++++|+.|++++.+++.|.|+ + .++||++||+++..+.+++..|
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~--~g~iv~isS~~~~~~~~~~~~Y 160 (261)
T 2wyu_A 86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLR---E--GGGIVTLTYYASEKVVPKYNVM 160 (261)
T ss_dssp SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---E--EEEEEEEECGGGTSBCTTCHHH
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhc---c--CCEEEEEecccccCCCCCchHH
Confidence 99999999998651 15678899999999999999999999999988753 1 3689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++|++++.|++.++.+.. ..++++.+|.+|.... .|...... ......+...+ +..+++|..+.+..++...
T Consensus 161 ~asK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~ 237 (261)
T 2wyu_A 161 AIAKAALEASVRYLAYELG--PKGVRVNAISAGPVRT-VAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCCCC-TGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHh--hhCcEEEEEeeCCCcC-chhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence 9999999999999887643 3356888998876643 44322111 01111112222 3468999999998887543
Q ss_pred c----eeeeeechhh
Q psy616 466 K----IQYLVLSGEL 476 (1152)
Q Consensus 466 ~----~~~~v~~~~~ 476 (1152)
. .+.+.+++.+
T Consensus 238 ~~~~tG~~~~vdgG~ 252 (261)
T 2wyu_A 238 ASGITGEVVYVDAGY 252 (261)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hcCCCCCEEEECCCc
Confidence 2 3455555554
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=8.7e-23 Score=229.33 Aligned_cols=230 Identities=16% Similarity=0.132 Sum_probs=176.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-------------cchHHHHHHHHhCCCcEEEEEecCCCHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-------------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMI 301 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-------------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~ 301 (1152)
.++++|||||++|||+++|+.|+++|++ |++++|+ ...++...+++..+.++.+++||++|.++++
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGAD-IILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 5899999999999999999999999985 4444543 1223445566677889999999999999999
Q ss_pred HHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc
Q psy616 302 SEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL 381 (1152)
Q Consensus 302 ~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~ 381 (1152)
++++++.+++|+||+||||||+.. .. .+.+.++|++++++|+.|++++.++++|+| ...+.||++||+++..
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~-~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-----~~~g~iv~isS~~~~~ 159 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICP-LG--AHLPVQAFADAFDVDFVGVINTVHAALPYL-----TSGASIITTGSVAGLI 159 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCC-CC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC-----CTTCEEEEECCHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCcCc-cc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh-----hcCcEEEEeccchhcc
Confidence 999999999999999999999876 44 348899999999999999999999999875 2346899999999887
Q ss_pred CC-----------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc------------ccch
Q psy616 382 GD-----------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN------------EQTD 438 (1152)
Q Consensus 382 g~-----------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~------------~~~~ 438 (1152)
+. ++...|+++|+++++|++.++.+.. ..++++.+|.+|... +.|..... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T 3pxx_A 160 AAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA--PQSIRANVIHPTNVN-TDMLNSAPMYRQFRPDLEAPSRAD 236 (287)
T ss_dssp HHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEESSBS-STTTSSHHHHHHHCTTSSSCCHHH
T ss_pred cccccccccccCCCccchHHHHHHHHHHHHHHHHHHHh--hcCcEEEEEecCccc-cccccccchhhhhccccccchhHH
Confidence 76 7788999999999999999988753 335688899888764 44432110 0000
Q ss_pred h-----HHhhcCCCCCCHHHHHHHHHHHHhcCc----eeeeeechhh
Q psy616 439 F-----YFKSSKQKVLHENDGLKLFEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 439 ~-----~~~~~g~~~l~~~e~~~~l~~~l~~~~----~~~~v~~~~~ 476 (1152)
. ......-+...++|..+++..++.... .+.+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~ 283 (287)
T 3pxx_A 237 ALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA 283 (287)
T ss_dssp HHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence 0 111112345788999999988875432 3555555543
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-22 Score=222.92 Aligned_cols=223 Identities=13% Similarity=0.083 Sum_probs=170.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCC-------CcEEEEEecCCCHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFN-------NKAIYIQVDVSDKLKMISEINS 306 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g-------~~v~~~~~Dvsd~~~v~~~~~~ 306 (1152)
.++++|||||+||||+++|++|+++|+ +|++++|+. ..++..++++..+ .++.++.+|++|.++++++++.
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ 84 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence 478999999999999999999999997 566666663 3334444444444 5788999999999999999999
Q ss_pred HHhhcCCe-eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC
Q psy616 307 IINNIGPI-DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 385 (1152)
Q Consensus 307 ~~~~~G~i-dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g 385 (1152)
+.+++|++ |+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++.. ..++||++||+++..+.++
T Consensus 85 ~~~~~g~i~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~ 161 (264)
T 2pd6_A 85 VQACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNG--CRGSIINISSIVGKVGNVG 161 (264)
T ss_dssp HHHHHSSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEEECCTHHHHCCTT
T ss_pred HHHHhCCCCeEEEECCCcCC-CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC--CCceEEEECChhhccCCCC
Confidence 99999999 99999999987 67888999999999999999999999999999986532 1467999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcC-CCCCCHHHHHHHHHHHHh
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~ 463 (1152)
+..|+++|++++.|++.++.+.. ..++++.+|.+|.... .|....... ......... ....++++..+.+..++.
T Consensus 162 ~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 238 (264)
T 2pd6_A 162 QTNYAASKAGVIGLTQTAARELG--RHGIRCNSVLPGFIAT-PMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLAS 238 (264)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBCS-CC----------CTGGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred ChhhHHHHHHHHHHHHHHHHHhh--hcCeEEEEEeeecccc-cchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcC
Confidence 99999999999999998877633 2356888998886543 332211110 011111111 134689999999988876
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 239 ~ 239 (264)
T 2pd6_A 239 E 239 (264)
T ss_dssp G
T ss_pred C
Confidence 4
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.7e-22 Score=222.10 Aligned_cols=232 Identities=14% Similarity=0.174 Sum_probs=177.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||++|||+++|++|+++|++ |++++|+. ..++..+++ +.++.+++||++|.++++++++++ +++++
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~ 103 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLG-VVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQLGR 103 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TTSSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HHhCC
Confidence 5899999999999999999999999984 66666663 233333333 678999999999999999999999 88999
Q ss_pred eeEEEEc-ccccCcCccc-----ccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhc---CCCCCEEEEecCCccccCCC
Q psy616 314 IDGVLHI-AGISGLTSNI-----LEANYKNFYSVLSSKISGTIALNYALENTILKLQ---KNKLDFVCYFSSSSAILGDF 384 (1152)
Q Consensus 314 idgvIh~-AG~~~~~~~~-----~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~---~~~~~~iV~~SS~a~~~g~~ 384 (1152)
+|+|||| ||+.. ...+ .+.+.++|++++++|+.|++++.+++.|.|.+.. ....+.||++||+++..+.+
T Consensus 104 id~lv~~aag~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 182 (281)
T 3ppi_A 104 LRYAVVAHGGFGV-AQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI 182 (281)
T ss_dssp EEEEEECCCCCCC-CCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT
T ss_pred CCeEEEccCcccc-cccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC
Confidence 9999999 66544 3333 3689999999999999999999999999986421 13457899999999999999
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC--CCCCCHHHHHHHHHHH
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK--QKVLHENDGLKLFEQL 461 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g--~~~l~~~e~~~~l~~~ 461 (1152)
+...|+++|++++.|++.++.+.. ..++++.+|.+|... +.|........ ........ .+..+++|..+.+..+
T Consensus 183 ~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l 259 (281)
T 3ppi_A 183 GQTAYAAAKAGVIGLTIAAARDLS--SAGIRVNTIAPGTMK-TPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFL 259 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHHh--hcCeEEEEEecCcCC-chhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999887753 335688889887664 44433222111 11122222 2357899999999998
Q ss_pred HhcCc--eeeeeechh
Q psy616 462 LIQDK--IQYLVLSGE 475 (1152)
Q Consensus 462 l~~~~--~~~~v~~~~ 475 (1152)
+.... .+.+.+++.
T Consensus 260 ~s~~~~tG~~i~vdGG 275 (281)
T 3ppi_A 260 LTNGYINGEVMRLDGA 275 (281)
T ss_dssp HHCSSCCSCEEEESTT
T ss_pred HcCCCcCCcEEEECCC
Confidence 87542 344555443
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-22 Score=222.03 Aligned_cols=223 Identities=12% Similarity=0.113 Sum_probs=173.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHH---cCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLIN---KYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~---~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
+++++|||||++|||+++|+.|++ +|+ +|++++|+. ..++..++++.. +.++.++++|++|+++++++++++.
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 478999999999999999999999 787 566666663 345556666554 6789999999999999999999998
Q ss_pred h--hcCCee--EEEEcccccCc-Cccccc-CCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC
Q psy616 309 N--NIGPID--GVLHIAGISGL-TSNILE-ANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 382 (1152)
Q Consensus 309 ~--~~G~id--gvIh~AG~~~~-~~~~~~-~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g 382 (1152)
+ .+|++| +||||||+... ..++.+ .+.++|++++++|+.|++++.++++|.|++.. ...+.||++||+++..+
T Consensus 84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~g~iv~isS~~~~~~ 162 (259)
T 1oaa_A 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP-GLSKTVVNISSLCALQP 162 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT-TCEEEEEEECCGGGTSC
T ss_pred hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCceEEEEcCchhcCC
Confidence 8 778999 99999998641 146777 79999999999999999999999999864210 13578999999999999
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----cc-chhHHhhc-CCCCCCHHHHH
Q psy616 383 DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----EQ-TDFYFKSS-KQKVLHENDGL 455 (1152)
Q Consensus 383 ~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----~~-~~~~~~~~-g~~~l~~~e~~ 455 (1152)
.+++..|+++|+++++|++.++.+.. ++++.+|.+|... +.|..... .. ........ .-+..+|+|..
T Consensus 163 ~~~~~~Y~asKaa~~~~~~~la~e~~----~i~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA 237 (259)
T 1oaa_A 163 YKGWGLYCAGKAARDMLYQVLAAEEP----SVRVLSYAPGPLD-NDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSA 237 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHCT----TEEEEEEECCSBS-SHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHhhCC----CceEEEecCCCcC-cchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHH
Confidence 99999999999999999999988742 3788899887664 45532110 00 01111111 12467899999
Q ss_pred HHHHHHHhc
Q psy616 456 KLFEQLLIQ 464 (1152)
Q Consensus 456 ~~l~~~l~~ 464 (1152)
+.+..++..
T Consensus 238 ~~v~~l~~~ 246 (259)
T 1oaa_A 238 QKLLGLLQK 246 (259)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999888763
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-22 Score=224.52 Aligned_cols=234 Identities=12% Similarity=0.026 Sum_probs=179.1
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+ ||||+++|+.|+++|++ |++++|+...++..+++......+.++.+|++|+++++++++++.+++|
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQ-LAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57899999999 99999999999999985 5666666544555566654323477899999999999999999999999
Q ss_pred CeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 313 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
++|+||||||+... ..++.+.+.++|++++++|+.|++++.+++.|.|++ ..+.||++||+++..+.+++..|
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~~Y 174 (285)
T 2p91_A 99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG----RNGAIVTLSYYGAEKVVPHYNVM 174 (285)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT----SCCEEEEEECGGGTSBCTTTTHH
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH----cCCEEEEEccchhccCCCCccHH
Confidence 99999999998751 156788999999999999999999999999998642 24789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++|+++++|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..+++++.+.+..++...
T Consensus 175 ~~sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~ 251 (285)
T 2p91_A 175 GIAKAALESTVRYLAYDIA--KHGHRINAISAGPVK-TLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDW 251 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCCC-CSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHhc--ccCcEEEEEEeCccc-CchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence 9999999999999887643 345688899988665 344322111 00111111222 3568999999998887542
Q ss_pred c----eeeeeechhh
Q psy616 466 K----IQYLVLSGEL 476 (1152)
Q Consensus 466 ~----~~~~v~~~~~ 476 (1152)
. .+.+.+++.+
T Consensus 252 ~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 252 ARAITGEVVHVDNGY 266 (285)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred ccCCCCCEEEECCCc
Confidence 2 3555555554
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.7e-22 Score=218.60 Aligned_cols=223 Identities=13% Similarity=0.166 Sum_probs=177.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||++++++|+++|+ +|++++|+. ..++..++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999998 566666663 345566677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC--hhhhH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~--~~Yaa 391 (1152)
+|+||||||+.....++.+.+.++|++++++|+.|++++.+++.|.|++. ..+.||++||.++..+.++. ..|++
T Consensus 91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~Y~~ 167 (260)
T 3awd_A 91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ---KQGVIVAIGSMSGLIVNRPQQQAAYNA 167 (260)
T ss_dssp CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCSSSCCHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc---CCCEEEEEecchhcccCCCCCccccHH
Confidence 99999999986424567889999999999999999999999999998653 34679999999999888888 99999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccc-cc--cccchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI-GN--NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~-~~--~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+|++++.|++.++.+.. ..++++.+|.+|.+... |.. .. ............+ ...++++..+++..++..
T Consensus 168 sK~a~~~~~~~l~~e~~--~~gi~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 241 (260)
T 3awd_A 168 SKAGVHQYIRSLAAEWA--PHGIRANAVAPTYIETT-LTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASD 241 (260)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBCCT-TTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhh--hcCeEEEEEEeeeeccc-hhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCc
Confidence 99999999998877633 23568889998877543 322 10 0111111121122 357899999999888754
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=223.82 Aligned_cols=233 Identities=14% Similarity=0.051 Sum_probs=179.9
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+ ||||+++|+.|+++|++ |++++|+...++..+++......+.++++|++|+++++++++++.+++|
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGAT-LAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999 99999999999999985 6666666545555566654333478899999999999999999999999
Q ss_pred CeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 313 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
++|+||||||+... ..++.+.+.++|++++++|+.|++++.++++|.|++ .+.||++||+++..+.+++..|
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~Y 158 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-----GASVLTLSYLGSTKYMAHYNVM 158 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEEECGGGTSBCTTCHHH
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-----CCEEEEEecchhcCCCCCchhh
Confidence 99999999998751 156789999999999999999999999999988631 3689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++|++++.|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..+|+++.+.+..++...
T Consensus 159 ~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~ 235 (275)
T 2pd4_A 159 GLAKAALESAVRYLAVDLG--KHHIRVNALSAGPIR-TLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSL 235 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCCC-CTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCeEEEEEeeCccc-cchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcc
Confidence 9999999999999887643 345688899988764 444322111 00111112222 3568999999999888543
Q ss_pred ----ceeeeeechhh
Q psy616 466 ----KIQYLVLSGEL 476 (1152)
Q Consensus 466 ----~~~~~v~~~~~ 476 (1152)
..+.+.+++.+
T Consensus 236 ~~~~tG~~~~vdgg~ 250 (275)
T 2pd4_A 236 SSGVSGEVHFVDAGY 250 (275)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred ccCCCCCEEEECCCc
Confidence 23455555554
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-22 Score=219.28 Aligned_cols=222 Identities=12% Similarity=0.168 Sum_probs=176.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEE-EEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIY-IQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~-~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++|||||+||||++++++|+++|+.++++.+|+. ..++..++++..+.++.+ +.+|++|.++++++++++.+.+|+
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999986555547764 334555667666777777 999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++. ..++||++||.++..+.+++..|+++|
T Consensus 81 ~d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK 156 (245)
T 2ph3_A 81 LDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA---RFGRIVNITSVVGILGNPGQANYVASK 156 (245)
T ss_dssp CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCTHHHHCCSSBHHHHHHH
T ss_pred CCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc---CCCEEEEEeChhhccCCCCCcchHHHH
Confidence 999999999887 6778899999999999999999999999999998754 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++.+|.+|... +.|....... ......... ....++++..+.+..++..
T Consensus 157 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 226 (245)
T 2ph3_A 157 AGLIGFTRAVAKEYA--QRGITVNAVAPGFIE-TEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSE 226 (245)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHH--HcCeEEEEEEEEeec-CcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999998877643 235688888887664 3332211111 111111111 2346899999999888754
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-22 Score=218.56 Aligned_cols=222 Identities=16% Similarity=0.205 Sum_probs=175.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+||||++++++|+++|+ +|++++|+. ..++..++++. .+.++.++.+|++|+++++++++++.+.+|
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999997 455566653 33444555554 467899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. +.++||++||.++..+.+++..|+++
T Consensus 85 ~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~s 160 (248)
T 2pnf_A 85 GIDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ---RWGRIVNISSVVGFTGNVGQVNYSTT 160 (248)
T ss_dssp CCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH---TCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc---CCcEEEEEccHHhcCCCCCCchHHHH
Confidence 9999999999887 6778899999999999999999999999999998653 34679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHH-hhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYF-KSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~-~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
|++++.|++.++.+.. ..++++.+|.+|.+.. .|...........+ .... ....++++..+++..++..
T Consensus 161 K~a~~~~~~~la~e~~--~~~i~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (248)
T 2pnf_A 161 KAGLIGFTKSLAKELA--PRNVLVNAVAPGFIET-DMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSE 231 (248)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECSBCC-GGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHhc--ccCeEEEEEEeceecC-chhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence 9999999998877643 2356888888876643 34322111111111 1111 2346899999998888754
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.3e-22 Score=223.49 Aligned_cols=236 Identities=16% Similarity=0.060 Sum_probs=181.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+||||+++|++|+++|++ |++++|+. ..++..++++.. +.++.++.+|++|.++++++++++.+.+|
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999985 66666663 344555566554 77899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ...+.||++||+.+..+.++...|+++
T Consensus 104 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~~~iv~isS~~~~~~~~~~~~Y~~s 180 (302)
T 1w6u_A 104 HPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA--QKGAAFLSITTIYAETGSGFVVPSASA 180 (302)
T ss_dssp SCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred CCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh--cCCCEEEEEcccccccCCCCcchhHHH
Confidence 9999999999876 6778899999999999999999999999999998532 234689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc---hhHHhhcCC-CCCCHHHHHHHHHHHHhcCc--
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT---DFYFKSSKQ-KVLHENDGLKLFEQLLIQDK-- 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~---~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~-- 466 (1152)
|++++.|++.++.+.. ..++++.+|.+|.+...+|........ ........+ ...++++..+++..++....
T Consensus 181 K~a~~~~~~~la~~~~--~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~ 258 (302)
T 1w6u_A 181 KAGVEAMSKSLAAEWG--KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASW 258 (302)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHHHHhh--hcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccc
Confidence 9999999999877632 235688999998887665532211111 011111111 34689999999988875432
Q ss_pred --eeeeeechhh
Q psy616 467 --IQYLVLSGEL 476 (1152)
Q Consensus 467 --~~~~v~~~~~ 476 (1152)
.+.+.+++..
T Consensus 259 ~~G~~~~v~gg~ 270 (302)
T 1w6u_A 259 INGAVIKFDGGE 270 (302)
T ss_dssp CCSCEEEESTTH
T ss_pred cCCCEEEECCCe
Confidence 3455555543
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=222.91 Aligned_cols=223 Identities=11% Similarity=0.090 Sum_probs=173.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||++|||+++|+.|+++|+ +|++++|+... + .....+.+|++|.++++++++++.+++|+|
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~------~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 95 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAG------I----AADLHLPGDLREAAYADGLPGAVAAGLGRL 95 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTT------S----CCSEECCCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH------H----HhhhccCcCCCCHHHHHHHHHHHHHhcCCC
Confidence 579999999999999999999999998 56677776421 0 112445899999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..++||++||+++..+.++++.|+++|+
T Consensus 96 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~asKa 171 (266)
T 3uxy_A 96 DIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA---GGGAIVNVASCWGLRPGPGHALYCLTKA 171 (266)
T ss_dssp CEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCSBTTBCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEECCHHhCCCCCCChHHHHHHH
Confidence 99999999987 7889999999999999999999999999999998764 3467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc--------chhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--------TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--------~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++|++.++.+.. ..++++.+|.+|... +.|....... .........+ +..+|+|..+++..++...
T Consensus 172 a~~~l~~~la~e~~--~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 248 (266)
T 3uxy_A 172 ALASLTQCMGMDHA--PQGIRINAVCPNEVN-TPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDA 248 (266)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEESSBC-CHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhh--hcCcEEEEEeeCCCc-chHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 99999999887743 335688899888764 3332110000 0111111111 3468999999998887643
Q ss_pred c----eeeeeechh
Q psy616 466 K----IQYLVLSGE 475 (1152)
Q Consensus 466 ~----~~~~v~~~~ 475 (1152)
. .+.+.+++.
T Consensus 249 ~~~itG~~i~vdGG 262 (266)
T 3uxy_A 249 ARYLCGSLVEVNGG 262 (266)
T ss_dssp GTTCCSCEEEESTT
T ss_pred hcCCcCCEEEECcC
Confidence 2 344555443
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-22 Score=221.80 Aligned_cols=231 Identities=13% Similarity=0.111 Sum_probs=175.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||++|||+++|+.|+++|+ +|++++|+.. ...+..+..+.++.++++|++|.++++++++++.+++|+|
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAE--RLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKI 80 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHH--HHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHH--HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999998 5666666642 2222223457789999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccc----cCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 315 DGVLHIAGISGLTSNIL----EANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~----~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
|+||||||+......+. +.+.++|++++++|+.|++++.++++|+|++. .+.||++||.++..+.+++..|+
T Consensus 81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~~~~~~~Y~ 156 (281)
T 3zv4_A 81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS----RGSVVFTISNAGFYPNGGGPLYT 156 (281)
T ss_dssp CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCGGGTSSSSSCHHHH
T ss_pred CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc----CCeEEEEecchhccCCCCCchhH
Confidence 99999999865222333 45578899999999999999999999998753 26799999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-----------ccchhHHhhcCC-CCCCHHHHHHHH
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-----------EQTDFYFKSSKQ-KVLHENDGLKLF 458 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-----------~~~~~~~~~~g~-~~l~~~e~~~~l 458 (1152)
++|+++.+|++.++.+.. . .+++.+|.+|... +.|..... ...........+ +..+|+|...++
T Consensus 157 asKaa~~~l~~~la~e~~--~-~Irvn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 232 (281)
T 3zv4_A 157 ATKHAVVGLVRQMAFELA--P-HVRVNGVAPGGMN-TDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAY 232 (281)
T ss_dssp HHHHHHHHHHHHHHHHHT--T-TSEEEEEEECSSC-C--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHH
T ss_pred HHHHHHHHHHHHHHHHhc--C-CCEEEEEECCcCc-CCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999999999999988753 2 2788899888664 44432110 000111112222 346789999998
Q ss_pred HHHHhcC-----ceeeeeechhh
Q psy616 459 EQLLIQD-----KIQYLVLSGEL 476 (1152)
Q Consensus 459 ~~~l~~~-----~~~~~v~~~~~ 476 (1152)
..++..+ ..+.+.+++.+
T Consensus 233 ~fL~s~~~~~~itG~~i~vdGG~ 255 (281)
T 3zv4_A 233 VFFATRGDSLPATGALLNYDGGM 255 (281)
T ss_dssp HHHHSTTTSTTCSSCEEEESSSG
T ss_pred HHhhcccccccccCcEEEECCCC
Confidence 8888632 23666666665
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-21 Score=219.20 Aligned_cols=228 Identities=13% Similarity=0.097 Sum_probs=176.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCC--CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFN--NKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g--~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||+||||+++|+.|+++|+. |++++|+. ..++..++++..+ .++.++.+|++|+++++++++++.+.+
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLK-VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 5799999999999999999999999985 55556653 3455566676655 578899999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc--cCCCCChhh
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI--LGDFGSCDY 389 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~--~g~~g~~~Y 389 (1152)
|++|+||||||+.. ...+.+.+.++|++++++|+.|++++.+.++|.|++.. .+.+.||++||+++. .+.++...|
T Consensus 110 g~iD~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~~~Y 187 (279)
T 1xg5_A 110 SGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRVLPLSVTHFY 187 (279)
T ss_dssp CCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhcccCCCCCCchh
Confidence 99999999999877 67788899999999999999999999999999987532 113689999999988 677788999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-c-ccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-N-EQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~-~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++|++++.|++.++.+......++++.+|.+|... +.|.... . ..............++++|..+.+..++..+.
T Consensus 188 ~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 188 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVE-TQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBC-SSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCccc-chhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCCc
Confidence 999999999999887663211345688889887664 3342110 0 00011111122346899999999999887653
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=222.23 Aligned_cols=223 Identities=15% Similarity=0.210 Sum_probs=169.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++|+.|+++|++ |+++.|+... + .++.++++|++|+++++++++++.+++|++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~------~----~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 88 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDK-VAITYRSGEP------P----EGFLAVKCDITDTEQVEQAYKEIEETHGPV 88 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSCC------C----TTSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHh------h----ccceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999985 5555565321 1 126789999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..+.||++||+++..+.+++..|+++|+
T Consensus 89 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~asK~ 164 (253)
T 2nm0_A 89 EVLIANAGVTK-DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA---KKGRVVLISSVVGLLGSAGQANYAASKA 164 (253)
T ss_dssp SEEEEECSCCT-TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEECCCCCCCCHHHHHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEECchhhCCCCCCcHHHHHHHH
Confidence 99999999987 6778889999999999999999999999999998754 3467999999999998889999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC-CCCCCHHHHHHHHHHHHhcC----cee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQD----KIQ 468 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~~----~~~ 468 (1152)
+++.|++.++.+.. ..++++.+|.+|.. ++.|........ ........ .+..+++|..+.+..++... ..+
T Consensus 165 a~~~~~~~la~e~~--~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~ 241 (253)
T 2nm0_A 165 GLVGFARSLARELG--SRNITFNVVAPGFV-DTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGA 241 (253)
T ss_dssp HHHHHHHHHHHHHC--SSSEEEEEEEECSB-CC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEEeCcC-cCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCc
Confidence 99999999887643 34568888988865 445532211111 11111111 23578999999998887643 234
Q ss_pred eeeechh
Q psy616 469 YLVLSGE 475 (1152)
Q Consensus 469 ~~v~~~~ 475 (1152)
.+.+++.
T Consensus 242 ~i~vdGG 248 (253)
T 2nm0_A 242 VIPVDGG 248 (253)
T ss_dssp EEEESTT
T ss_pred EEEECCc
Confidence 4555443
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.7e-22 Score=220.28 Aligned_cols=221 Identities=14% Similarity=0.118 Sum_probs=172.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||++++++|+++|+. |+++.|+ +..++..+.++..+.++.++.+|++|.++++++++++.+.+|+
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGAD-VAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCE-EEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999985 4444554 4455566666666778999999999999999999999999999
Q ss_pred eeEEEEcccccCcC-cccc-cCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC--CCCChhh
Q psy616 314 IDGVLHIAGISGLT-SNIL-EANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--DFGSCDY 389 (1152)
Q Consensus 314 idgvIh~AG~~~~~-~~~~-~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g--~~g~~~Y 389 (1152)
+|+||||||+.. . .++. +.+.++|++++++|+.|++++.+.++|.|++. ..++||++||.++..+ .++...|
T Consensus 112 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~~~Y 187 (279)
T 3ctm_A 112 IDVFVANAGVTW-TQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN---GKGSLIITSSISGKIVNIPQLQAPY 187 (279)
T ss_dssp CSEEEECGGGST-TC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCCTTSCC---CCHHHH
T ss_pred CCEEEECCcccc-cCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCeEEEECchHhccCCCCCCcccH
Confidence 999999999876 4 5666 88899999999999999999999999998753 3568999999999988 7888999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
+++|++++.|++.++.+.. ..+ ++.+|.+|... +.|....... .........+ +..+++|..+.+..++..
T Consensus 188 ~~sK~a~~~~~~~la~e~~--~~~-~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~ 260 (279)
T 3ctm_A 188 NTAKAACTHLAKSLAIEWA--PFA-RVNTISPGYID-TDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASN 260 (279)
T ss_dssp HHHHHHHHHHHHHHHHHTT--TTC-EEEEEEECSBS-STTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhc--ccC-CEEEEeccCCc-cccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCc
Confidence 9999999999999987743 234 77788776554 4453211111 1111122222 357899999999888764
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-21 Score=218.02 Aligned_cols=223 Identities=13% Similarity=0.121 Sum_probs=175.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++|+.|+++|++ |+++.|+... +.++.++++|++|+++++++++++.+++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSK-VIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999985 5555665432 4567889999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++ ...+.||++||.++..+.++...|+++|+
T Consensus 76 D~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (264)
T 2dtx_A 76 SVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIR---SRDPSIVNISSVQASIITKNASAYVTSKH 151 (264)
T ss_dssp CEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---SSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---cCCcEEEEECCchhccCCCCchhHHHHHH
Confidence 99999999887 678889999999999999999999999999999753 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-------cc----c-chhHHhhcC-CCCCCHHHHHHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-------NE----Q-TDFYFKSSK-QKVLHENDGLKLFEQL 461 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-------~~----~-~~~~~~~~g-~~~l~~~e~~~~l~~~ 461 (1152)
+++.|++.++.+.. .. +++.+|.+|... +.|.... .. . ......... .+..+++|..+++..+
T Consensus 152 a~~~~~~~la~e~~--~~-i~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l 227 (264)
T 2dtx_A 152 AVIGLTKSIALDYA--PL-LRCNAVCPATID-TPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFL 227 (264)
T ss_dssp HHHHHHHHHHHHHT--TT-SEEEEEEECSBC-SHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc--CC-cEEEEEEeCCCc-CcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999987643 23 788888887664 4442211 00 0 011111111 2357899999999888
Q ss_pred HhcC----ceeeeeechhh
Q psy616 462 LIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 462 l~~~----~~~~~v~~~~~ 476 (1152)
+... ..+.+.+++.+
T Consensus 228 ~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 228 ASREASFITGTCLYVDGGL 246 (264)
T ss_dssp HSGGGTTCCSCEEEESTTG
T ss_pred hCchhcCCCCcEEEECCCc
Confidence 7643 23455555543
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-22 Score=221.85 Aligned_cols=233 Identities=11% Similarity=0.013 Sum_probs=177.5
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+ ||||+++|+.|+++|++ |++++|+...++..+++........++++|++|+++++++++++.+++|
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 47899999999 99999999999999985 5555666544455566654333347899999999999999999999999
Q ss_pred CeeEEEEcccccCc---Cccccc-CCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 313 PIDGVLHIAGISGL---TSNILE-ANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~-~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
++|+||||||+... ..++.+ .+.++|++++++|+.|++++.+++.|.|+ . .++||++||+++..+.+++..
T Consensus 87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~--~g~iv~isS~~~~~~~~~~~~ 161 (265)
T 1qsg_A 87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN---P--GSALLTLSYLGAERAIPNYNV 161 (265)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---E--EEEEEEEECGGGTSBCTTTTH
T ss_pred CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---c--CCEEEEEcchhhccCCCCchH
Confidence 99999999998651 156777 89999999999999999999999988753 1 368999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++|++++.|++.++.+.. ..++++.+|.+|... +.|...... ..........+ +..++++..+.+..++..
T Consensus 162 Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~ 238 (265)
T 1qsg_A 162 MGLAKASLEANVRYMANAMG--PEGVRVNAISAGPIR-TLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSD 238 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--TTTEEEEEEEECCCC-CTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHHHHhh--hcCeEEEEEEeCCCc-cchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999887643 345688899887664 444322111 00111111122 356899999999888754
Q ss_pred Cc----eeeeeechhh
Q psy616 465 DK----IQYLVLSGEL 476 (1152)
Q Consensus 465 ~~----~~~~v~~~~~ 476 (1152)
.. .+.+.+++.+
T Consensus 239 ~~~~~tG~~~~vdgG~ 254 (265)
T 1qsg_A 239 LSAGISGEVVHVDGGF 254 (265)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred hhcCccCCEEEECCCc
Confidence 32 3455555554
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.8e-22 Score=218.54 Aligned_cols=228 Identities=17% Similarity=0.148 Sum_probs=158.7
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
-.+++++|||||+||||+++|+.|+++|++ |++++|+. ..++..+++ ..++.++.+|++|.+++.+++++ +
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~----~ 82 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSK-VIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISK----T 82 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHT----C
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHh----c
Confidence 357899999999999999999999999974 66666653 233333333 45788999999999998887754 4
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
+++|+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|.|++. ..++||++||.++..+.++++.|++
T Consensus 83 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~ 158 (249)
T 3f9i_A 83 SNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK---RYGRIINISSIVGIAGNPGQANYCA 158 (249)
T ss_dssp SCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCCCC--CCSCSHHHHH
T ss_pred CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcEEEEEccHHhccCCCCCchhHH
Confidence 78999999999987 6778888999999999999999999999999998754 3467999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcCC-CCCCHHHHHHHHHHHHhcCc---
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK--- 466 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~--- 466 (1152)
+|+++++|++.++.+.. ..++++.+|.+|.+. +.|....... .........+ +...+++..+++..++....
T Consensus 159 sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~ 235 (249)
T 3f9i_A 159 SKAGLIGMTKSLSYEVA--TRGITVNAVAPGFIK-SDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYI 235 (249)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHH--HcCcEEEEEecCccc-cCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence 99999999999887643 335688889888765 4443322111 1111222222 35679999999988876542
Q ss_pred -eeeeeechh
Q psy616 467 -IQYLVLSGE 475 (1152)
Q Consensus 467 -~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 236 tG~~~~vdgG 245 (249)
T 3f9i_A 236 TGQTLHVNGG 245 (249)
T ss_dssp CSCEEEESTT
T ss_pred cCcEEEECCC
Confidence 244444443
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-21 Score=216.99 Aligned_cols=223 Identities=19% Similarity=0.163 Sum_probs=173.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+||||++++++|+++|+ +|++++|+ ....+..+++.. .+.++.++.+|++|.++++++++++.+++|
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999997 55555664 444444455532 367899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG------- 385 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g------- 385 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++.. ..++||++||.++..+.++
T Consensus 92 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~ 168 (265)
T 1h5q_A 92 PISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQ--QKGSIVVTSSMSSQIINQSSLNGSLT 168 (265)
T ss_dssp SEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEEECCGGGTSCCEEETTEECS
T ss_pred CCCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcC--CCceEEEeCCchhhcccccccccccc
Confidence 9999999999987 67888999999999999999999999999999986532 2468999999998877653
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
...|+++|++++.|++.++.+.. ..++++.+|.+|... +.|........ ........+ +..++++..+.+..++.
T Consensus 169 ~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 245 (265)
T 1h5q_A 169 QVFYNSSKAACSNLVKGLAAEWA--SAGIRVNALSPGYVN-TDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLS 245 (265)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS
T ss_pred ccccHHHHHHHHHHHHHHHHHHH--hcCcEEEEEecCccc-cccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhhcc
Confidence 78999999999999999887643 234688889887665 44432211111 111111111 35689999999888875
Q ss_pred c
Q psy616 464 Q 464 (1152)
Q Consensus 464 ~ 464 (1152)
.
T Consensus 246 ~ 246 (265)
T 1h5q_A 246 D 246 (265)
T ss_dssp G
T ss_pred C
Confidence 4
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-21 Score=217.35 Aligned_cols=224 Identities=13% Similarity=0.084 Sum_probs=173.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+... ....++.++++|++|+++++++++++.+++|++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~--------~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYR-VVATSRSIKP--------SADPDIHTVAGDISKPETADRIVREGIERFGRI 97 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSCCC--------CSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChhh--------cccCceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence 5789999999999999999999999985 5555665321 112368999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc--cCCCCChhhhHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI--LGDFGSCDYAMG 392 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~--~g~~g~~~Yaaa 392 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||.++. .+..+...|+++
T Consensus 98 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~~~Y~~s 173 (260)
T 3un1_A 98 DSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ---GSGHIVSITTSLVDQPMVGMPSALASLT 173 (260)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCTTTTSCBTTCCCHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---CCcEEEEEechhhccCCCCCccHHHHHH
Confidence 99999999987 7789999999999999999999999999999998653 34679999998876 345667899999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC--ceee
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD--KIQY 469 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~--~~~~ 469 (1152)
|+++++|++.++.+.. ..++++.+|.+|... +.|... ........... -+...++|.++++..+.... ..+.
T Consensus 174 Kaa~~~l~~~la~e~~--~~gI~vn~v~PG~v~-t~~~~~--~~~~~~~~~~p~~r~~~~~dva~av~~L~~~~~itG~~ 248 (260)
T 3un1_A 174 KGGLNAVTRSLAMEFS--RSGVRVNAVSPGVIK-TPMHPA--ETHSTLAGLHPVGRMGEIRDVVDAVLYLEHAGFITGEI 248 (260)
T ss_dssp HHHHHHHHHHHHHHTT--TTTEEEEEEEECCBC-CTTSCG--GGHHHHHTTSTTSSCBCHHHHHHHHHHHHHCTTCCSCE
T ss_pred HHHHHHHHHHHHHHhC--cCCeEEEEEeecCCC-CCCCCH--HHHHHHhccCCCCCCcCHHHHHHHHHHhcccCCCCCcE
Confidence 9999999999988754 346788899887664 444322 11111111111 13468999999988874433 2355
Q ss_pred eeechhh
Q psy616 470 LVLSGEL 476 (1152)
Q Consensus 470 ~v~~~~~ 476 (1152)
+.+++.+
T Consensus 249 i~vdGG~ 255 (260)
T 3un1_A 249 LHVDGGQ 255 (260)
T ss_dssp EEESTTG
T ss_pred EEECCCe
Confidence 5555543
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=8.6e-22 Score=221.25 Aligned_cols=224 Identities=10% Similarity=0.037 Sum_probs=177.6
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCC-cEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNN-KAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~-~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
-.++++|||||+||||+++|+.|+++|+ +|++++|+. ..++..++++..+. ++.++.+|++|.++++++++++.+.+
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 3589999999999999999999999998 466666663 34555556665554 78999999999999999999999999
Q ss_pred CCeeEEEEc-ccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 312 GPIDGVLHI-AGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 312 G~idgvIh~-AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
|++|+|||| ||+.. ..+.+.+.++|++++++|+.|++++.+++.|.|++. .+.||++||+++..+.+++..|+
T Consensus 105 g~iD~li~naag~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~----~g~iv~isS~~~~~~~~~~~~Y~ 178 (286)
T 1xu9_A 105 GGLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS----NGSIVVVSSLAGKVAYPMVAAYS 178 (286)
T ss_dssp TSCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEEEEGGGTSCCTTCHHHH
T ss_pred CCCCEEEECCccCCC--CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC----CCEEEEECCcccccCCCCccHHH
Confidence 999999999 57654 345567899999999999999999999999998642 36899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeee
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYL 470 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~ 470 (1152)
++|++++.|++.++.+......++++.+|.+|.+. +.|...... .......++++++++.+...+..+...++
T Consensus 179 asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~-t~~~~~~~~------~~~~~~~~~~~~vA~~i~~~~~~~~~~~~ 251 (286)
T 1xu9_A 179 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID-TETAMKAVS------GIVHMQAAPKEECALEIIKGGALRQEEVY 251 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC-CHHHHHHSC------GGGGGGCBCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccC-ChhHHHhcc------ccccCCCCCHHHHHHHHHHHHhcCCceEE
Confidence 99999999999887764212456788888877664 444321000 01123468999999999998887665544
Q ss_pred e
Q psy616 471 V 471 (1152)
Q Consensus 471 v 471 (1152)
+
T Consensus 252 ~ 252 (286)
T 1xu9_A 252 Y 252 (286)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-21 Score=216.24 Aligned_cols=224 Identities=11% Similarity=0.088 Sum_probs=168.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||+||||+++|+.|+++|++ |+++.|+... +..+ +.++.+|++|+++++++++++.+++|++
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~-------~~~~--~~~~~~D~~d~~~~~~~~~~~~~~~g~i 75 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAK-VTGFDQAFTQ-------EQYP--FATEVMDVADAAQVAQVCQRLLAETERL 75 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCCCS-------SCCS--SEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCchhh-------hcCC--ceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999985 5555665431 1223 6788999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||.++..+.++...|+++|+
T Consensus 76 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (250)
T 2fwm_X 76 DALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ---RGGAIVTVASDAAHTPRIGMSAYGASKA 151 (250)
T ss_dssp CEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CEEEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc---CCCEEEEECchhhCCCCCCCchHHHHHH
Confidence 99999999977 6788899999999999999999999999999998754 3467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--ccc-ch-hHHh-------hcC-CCCCCHHHHHHHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQ-TD-FYFK-------SSK-QKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~-~~-~~~~-------~~g-~~~l~~~e~~~~l~~~l 462 (1152)
+++.|++.++.+.. ..++++.+|.+|... +.|.... ... .. .... ... .+..+|+|..+.+..++
T Consensus 152 a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~ 228 (250)
T 2fwm_X 152 ALKSLALSVGLELA--GSGVRCNVVSPGSTD-TDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA 228 (250)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECCC-------------------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--ccCCEEEEEECCccc-CccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHh
Confidence 99999999887643 235688888887664 3332211 000 00 1100 111 13468999999988887
Q ss_pred hcCc----eeeeeechh
Q psy616 463 IQDK----IQYLVLSGE 475 (1152)
Q Consensus 463 ~~~~----~~~~v~~~~ 475 (1152)
.... .+.+.+++.
T Consensus 229 s~~~~~~tG~~i~vdGG 245 (250)
T 2fwm_X 229 SDLASHITLQDIVVDGG 245 (250)
T ss_dssp SGGGTTCCSCEEEESTT
T ss_pred CccccCCCCCEEEECCC
Confidence 6432 344555443
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-22 Score=220.74 Aligned_cols=222 Identities=12% Similarity=0.069 Sum_probs=158.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-C
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-G 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-G 312 (1152)
.++++|||||+||||++++++|+++|+ +|++++|+. ..++..++++..+.++.++.+|++|.++++++++++.+.+ +
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999998 556666663 3455566677778889999999999999999999999999 8
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..++||++||.++..+.++...|+++
T Consensus 92 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~~s 167 (266)
T 1xq1_A 92 KLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS---GCGNIIFMSSIAGVVSASVGSIYSAT 167 (266)
T ss_dssp CCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---SSCEEEEEC----------CCHHHHH
T ss_pred CCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEccchhccCCCCCchHHHH
Confidence 9999999999876 6778889999999999999999999999999998654 34679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-c-cchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-E-QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~-~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
|++++.|++.++.+.. ..++++.+|.+|.... .|..... . ..........+ ...++++..+++..++..
T Consensus 168 K~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 239 (266)
T 1xq1_A 168 KGALNQLARNLACEWA--SDGIRANAVAPAVIAT-PLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMP 239 (266)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHh--HhCcEEEEEeeCCCcc-chhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999999887643 2356888898876643 3322110 0 00011111111 246788888888877753
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=215.75 Aligned_cols=234 Identities=16% Similarity=0.193 Sum_probs=177.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||++++++|+++|+. |++++|+. ..++..+++... .++.++.+|++|+++++++++.+.+++|+
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAK-VMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999985 66666664 233344444322 57899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCC-CEEEEecCCccccCCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKL-DFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~-~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++ ... +.||++||.++..+.+++..|+++
T Consensus 83 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~~~~iv~isS~~~~~~~~~~~~Y~~s 158 (251)
T 1zk4_A 83 VSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN---KGLGASIINMSSIEGFVGDPSLGAYNAS 158 (251)
T ss_dssp CCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---SSSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh---cCCCCEEEEeCCchhccCCCCCccchHH
Confidence 999999999876 677889999999999999999999999999999753 233 689999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch-h-HHhhcCC-CCCCHHHHHHHHHHHHhcCc---
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-F-YFKSSKQ-KVLHENDGLKLFEQLLIQDK--- 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~-~~~~~g~-~~l~~~e~~~~l~~~l~~~~--- 466 (1152)
|++++.|++.++.+......++++.+|.+|... +.|......... . ......+ ...++++..+++..++....
T Consensus 159 K~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 237 (251)
T 1zk4_A 159 KGAVRIMSKSAALDCALKDYDVRVNTVHPGYIK-TPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA 237 (251)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBC-CHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCc-chhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccc
Confidence 999999999877542211235688889877654 344322111100 0 0011111 24689999999998876432
Q ss_pred -eeeeeechh
Q psy616 467 -IQYLVLSGE 475 (1152)
Q Consensus 467 -~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 238 ~G~~~~v~gG 247 (251)
T 1zk4_A 238 TGSEFVVDGG 247 (251)
T ss_dssp CSCEEEESTT
T ss_pred cCcEEEECCC
Confidence 344545444
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=215.58 Aligned_cols=222 Identities=11% Similarity=0.104 Sum_probs=175.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||++++++|+++|+. |++++|+. ..++..++++..+.++.++.+|++|+++++++++++.+++|+
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999984 55566653 345556677777888999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++ +.+.++|++++++|+.|++++.+++.|.|++. ..++||++||.++..+.++...|+++|
T Consensus 89 ~d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK 163 (255)
T 1fmc_A 89 VDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN---GGGVILTITSMAAENKNINMTSYASSK 163 (255)
T ss_dssp CCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred CCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---CCcEEEEEcchhhcCCCCCCcccHHHH
Confidence 999999999876 5555 78999999999999999999999999998654 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++.|++.++.+.. ..++++.+|.+|......+....... ......... .....+++..+++..++..
T Consensus 164 ~a~~~~~~~~~~~~~--~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 234 (255)
T 1fmc_A 164 AAASHLVRNMAFDLG--EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSP 234 (255)
T ss_dssp HHHHHHHHHHHHHHH--TTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhh--hcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCC
Confidence 999999998876632 33568888888766543221110111 111111111 1346899999998888754
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-22 Score=223.01 Aligned_cols=210 Identities=18% Similarity=0.219 Sum_probs=170.5
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCC-CcEEEEEecCCCH-HHHHHHHHHHHhh
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFN-NKAIYIQVDVSDK-LKMISEINSIINN 310 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g-~~v~~~~~Dvsd~-~~v~~~~~~~~~~ 310 (1152)
..++++|||||++|||+++|+.|+++|+ +|++++|+. ..++..+++++.+ .++.++.+|++|. ++++++++.+.++
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 3689999999999999999999999998 566667764 4456667777654 5799999999998 9999999999999
Q ss_pred cCCeeEEEEcccccCc-----------------------------CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy616 311 IGPIDGVLHIAGISGL-----------------------------TSNILEANYKNFYSVLSSKISGTIALNYALENTIL 361 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~-----------------------------~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~ 361 (1152)
+|+||+||||||+... ...+.+.+.++|++++++|+.|++++.++++|+|+
T Consensus 89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~ 168 (311)
T 3o26_A 89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ 168 (311)
T ss_dssp HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence 9999999999998631 12456779999999999999999999999999975
Q ss_pred HhcCCCCCEEEEecCCccccCC-------------------------------------------CCChhhhHHHHHHHH
Q psy616 362 KLQKNKLDFVCYFSSSSAILGD-------------------------------------------FGSCDYAMGNRFQTV 398 (1152)
Q Consensus 362 ~~~~~~~~~iV~~SS~a~~~g~-------------------------------------------~g~~~Yaaana~l~~ 398 (1152)
+ .+.++||++||+++..+. ++...|+++|++++.
T Consensus 169 ~---~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~ 245 (311)
T 3o26_A 169 L---SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA 245 (311)
T ss_dssp T---SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred c---CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence 3 345789999999987754 467899999999999
Q ss_pred HHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 399 YAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 399 la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|++.++.+.. ++++.+|++|... +.|.. +...++++++.+.+..++..+
T Consensus 246 ~~~~la~e~~----~i~v~~v~PG~v~-T~~~~-------------~~~~~~~~~~a~~~~~~~~~~ 294 (311)
T 3o26_A 246 YTRVLANKIP----KFQVNCVCPGLVK-TEMNY-------------GIGNYTAEEGAEHVVRIALFP 294 (311)
T ss_dssp HHHHHHHHCT----TSEEEEECCCSBC-SGGGT-------------TCCSBCHHHHHHHHHHHHTCC
T ss_pred HHHHHHhhcC----CceEEEecCCcee-cCCcC-------------CCCCCCHHHHHHHHHHHHhCC
Confidence 9999988742 3788899887654 44432 223578999998888877644
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=213.36 Aligned_cols=210 Identities=14% Similarity=0.074 Sum_probs=165.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||++++++|+++|+ +|+++.|+.. .++..+++ + ++.++.+|++|.++++++++++.+.+|+
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAEL---E-GALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHS---T-TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh---h-hceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 367999999999999999999999998 4666666532 22222222 2 6788999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++. +.+.||++||.++..+.++...|+++|
T Consensus 79 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y~~sK 154 (234)
T 2ehd_A 79 LSALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR---GGGTIVNVGSLAGKNPFKGGAAYNASK 154 (234)
T ss_dssp CCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT---TCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred CCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCcEEEEECCchhcCCCCCCchhhHHH
Confidence 999999999876 6788899999999999999999999999999997642 357899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.|++.++.+.. ..++++.+|.+|... +.|..... .. +.++++++..+.+..++..+
T Consensus 155 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~---~~------~~~~~~~dvA~~~~~l~~~~ 214 (234)
T 2ehd_A 155 FGLLGLAGAAMLDLR--EANVRVVNVLPGSVD-TGFAGNTP---GQ------AWKLKPEDVAQAVLFALEMP 214 (234)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEECC--------------------------CCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHh--hcCcEEEEEEeCCCc-CCcccccc---cc------cCCCCHHHHHHHHHHHhCCC
Confidence 999999998876543 235688899887654 44432211 00 12689999999999988765
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=217.94 Aligned_cols=223 Identities=15% Similarity=0.195 Sum_probs=163.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+.... + ++..+.+|++|+++++++++++.+++|++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~------~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 82 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHK-VAVTHRGSGAP------K----GLFGVEVDVTDSDAVDRAFTAVEEHQGPV 82 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSSCCC------T----TSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHHH------H----HhcCeeccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999975 55556653210 0 11138899999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..+.||++||.++..+.+++..|+++|+
T Consensus 83 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 158 (247)
T 1uzm_A 83 EVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN---KFGRMIFIGSVSGLWGIGNQANYAASKA 158 (247)
T ss_dssp SEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCCEEEEECCHhhccCCCCChhHHHHHH
Confidence 99999999987 6788899999999999999999999999999998653 3468999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcC-CCCCCHHHHHHHHHHHHhcC----cee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSK-QKVLHENDGLKLFEQLLIQD----KIQ 468 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g-~~~l~~~e~~~~l~~~l~~~----~~~ 468 (1152)
+++.|++.++.+.. ..++++.+|.+|... +.|........ ........ .+..++++..+.+..++... ..+
T Consensus 159 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~ 235 (247)
T 1uzm_A 159 GVIGMARSIARELS--KANVTANVVAPGYID-TDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGA 235 (247)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHhh--hcCcEEEEEEeCCCc-ccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCC
Confidence 99999999887643 235688888887664 44432111110 11111111 23578999999998887643 234
Q ss_pred eeeechh
Q psy616 469 YLVLSGE 475 (1152)
Q Consensus 469 ~~v~~~~ 475 (1152)
.+.+++.
T Consensus 236 ~i~vdgG 242 (247)
T 1uzm_A 236 VIPVDGG 242 (247)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 4544443
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=213.92 Aligned_cols=224 Identities=13% Similarity=0.144 Sum_probs=173.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++++|||||+||||+++|+.|+++|+ +|++++|+... ..+++ + +.++.+|++| ++++++++++.+.+|++|
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id 72 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH 72 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence 57999999999999999999999997 56666666432 33333 3 6789999999 999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC--CCChhhhHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--FGSCDYAMGN 393 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~--~g~~~Yaaan 393 (1152)
+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||.++..+. ++...|+++|
T Consensus 73 ~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~~~Y~~sK 148 (239)
T 2ekp_A 73 VLVHAAAVNV-RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA---GWGRVLFIGSVTTFTAGGPVPIPAYTTAK 148 (239)
T ss_dssp EEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTSCCHHHHHHH
T ss_pred EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEECchhhccCCCCCCCccHHHHH
Confidence 9999999877 6788899999999999999999999999999998754 34679999999999888 8999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--cc-chhHHhhcCC-CCCCHHHHHHHHHHHHhcC----
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD---- 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~---- 465 (1152)
++++.|++.++.+.. ..++++.+|.+|... +.|..... .. .........+ +..+|+|..+.+..++...
T Consensus 149 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~ 225 (239)
T 2ekp_A 149 TALLGLTRALAKEWA--RLGIRVNLLCPGYVE-TEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYL 225 (239)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-SGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHHHHhh--hcCcEEEEEEeCCcc-CchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCC
Confidence 999999999887643 335688888887664 34432110 00 0111111111 3468999999998877542
Q ss_pred ceeeeeechh
Q psy616 466 KIQYLVLSGE 475 (1152)
Q Consensus 466 ~~~~~v~~~~ 475 (1152)
..+.+.+++.
T Consensus 226 tG~~~~vdgG 235 (239)
T 2ekp_A 226 TGQAVAVDGG 235 (239)
T ss_dssp CSCEEEESTT
T ss_pred CCCEEEECCC
Confidence 2344555544
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.7e-22 Score=220.27 Aligned_cols=230 Identities=16% Similarity=0.140 Sum_probs=174.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++|+.|+++|++ |++++|++. .++..+++ ..+.+++||++|+++++++++++.+++|+
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGAR-VVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFGR 82 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999985 566666642 22222222 24788999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.....++.+.+.++|++++++|+.|++++.+++.|+|++. .+.||++||+++..+.+++..|+++|
T Consensus 83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~g~iv~isS~~~~~~~~~~~~Y~asK 158 (270)
T 1yde_A 83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS----QGNVINISSLVGAIGQAQAVPYVATK 158 (270)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC----CCEEEEEcCccccCCCCCCcccHHHH
Confidence 99999999986524678899999999999999999999999999998653 36799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc----cccchhH---HhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN----NEQTDFY---FKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~----~~~~~~~---~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++++|++.++.+.. ..++++.+|.+|.... .|.... ....... .....+ +..+|+|..+++..++...
T Consensus 159 aa~~~~~~~la~e~~--~~gi~vn~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~ 235 (270)
T 1yde_A 159 GAVTAMTKALALDES--PYGVRVNCISPGNIWT-PLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEA 235 (270)
T ss_dssp HHHHHHHHHHHHHHG--GGTCEEEEEEECSBCC-HHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEEeCcccc-chhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcccC
Confidence 999999999887643 3356888888876643 332110 0000001 111111 2357899988888777642
Q ss_pred ---ceeeeeechhh
Q psy616 466 ---KIQYLVLSGEL 476 (1152)
Q Consensus 466 ---~~~~~v~~~~~ 476 (1152)
..+.+.+++.+
T Consensus 236 ~~itG~~i~vdGG~ 249 (270)
T 1yde_A 236 NFCTGIELLVTGGA 249 (270)
T ss_dssp TTCCSCEEEESTTT
T ss_pred CCcCCCEEEECCCe
Confidence 22455555543
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-21 Score=215.99 Aligned_cols=220 Identities=15% Similarity=0.090 Sum_probs=173.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecC-Cc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGR-SK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R-~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+||||++++++|+++|+++ +++.| +. ..++..++++..+.++.++.+|++|+++++++++++.+++|
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v-~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASV-VVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEE-EEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEE-EEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999854 44455 43 33455667777788899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-cCCCCChhhhH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAM 391 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-~g~~g~~~Yaa 391 (1152)
++|+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.+.|+ . .++||++||.++. .+.+++..|++
T Consensus 99 ~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~--~~~iv~~sS~~~~~~~~~~~~~Y~~ 172 (274)
T 1ja9_A 99 GLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR---R--GGRIILTSSIAAVMTGIPNHALYAG 172 (274)
T ss_dssp CEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE---E--EEEEEEECCGGGTCCSCCSCHHHHH
T ss_pred CCCEEEECCCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---h--CCEEEEEcChHhccCCCCCCchHHH
Confidence 9999999999987 67788999999999999999999999999998853 1 2689999999998 78899999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccc------------ccc-cc-chhHHhhcC-CCCCCHHHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI------------GNN-EQ-TDFYFKSSK-QKVLHENDGLK 456 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~------------~~~-~~-~~~~~~~~g-~~~l~~~e~~~ 456 (1152)
+|++++.|++.++.+.. ..++++.+|.+|.+.. .|.. ... .. ......... -....+++..+
T Consensus 173 sK~a~~~~~~~~~~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 249 (274)
T 1ja9_A 173 SKAAVEGFCRAFAVDCG--AKGVTVNCIAPGGVKT-DMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGR 249 (274)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBSS-HHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh--hcCeEEEEEeeCcccc-cchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHH
Confidence 99999999998877632 2356888898887643 3321 000 00 001111111 13568899999
Q ss_pred HHHHHHhc
Q psy616 457 LFEQLLIQ 464 (1152)
Q Consensus 457 ~l~~~l~~ 464 (1152)
++..++..
T Consensus 250 ~i~~l~~~ 257 (274)
T 1ja9_A 250 AVSALCQE 257 (274)
T ss_dssp HHHHHHSG
T ss_pred HHHHHhCc
Confidence 88888754
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.9e-22 Score=214.21 Aligned_cols=213 Identities=14% Similarity=0.091 Sum_probs=164.7
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++|||||++|||+++|+.|+++|++ |++++|+.. ...+..+..+.++.++.+|++|.++++++++++.+.+ |+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~---d~ 75 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA-TYLTGRSES--KLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIP---ST 75 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHH--HHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCC---SE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE-EEEEeCCHH--HHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcC---CE
Confidence 57999999999999999999999986 556666642 2222223446778899999999999999998876543 99
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHH
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 396 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l 396 (1152)
||||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++. ...||++||.++..+.++.+.|+++|+++
T Consensus 76 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~iv~isS~~~~~~~~~~~~Y~asKaa~ 150 (230)
T 3guy_A 76 VVHSAGSGY-FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ----PVNVVMIMSTAAQQPKAQESTYCAVKWAV 150 (230)
T ss_dssp EEECCCCCC-CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS----CCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred EEEeCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEEeecccCCCCCCCchhHHHHHHH
Confidence 999999987 7889999999999999999999999999999997532 23799999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceee
Q psy616 397 TVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 469 (1152)
Q Consensus 397 ~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~ 469 (1152)
++|++.++.+.. ..++++.+|.+|... +.|........ .....++++++.+.+..++..+...+
T Consensus 151 ~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~------~~~~~~~~~dvA~~i~~l~~~~~~~~ 214 (230)
T 3guy_A 151 KGLIESVRLELK--GKPMKIIAVYPGGMA-TEFWETSGKSL------DTSSFMSAEDAALMIHGALANIGNGY 214 (230)
T ss_dssp HHHHHHHHHHTT--TSSCEEEEEEECCC-----------------------CCCHHHHHHHHHHHCCEETTEE
T ss_pred HHHHHHHHHHHH--hcCeEEEEEECCccc-ChHHHhcCCCC------CcccCCCHHHHHHHHHHHHhCcCCCC
Confidence 999999988754 446788899887664 44432211110 11246889999999998887654433
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=217.11 Aligned_cols=222 Identities=12% Similarity=0.091 Sum_probs=167.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh-cC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN-IG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~-~G 312 (1152)
.++++|||||+||||+++|+.|+++|++ |++++|+ +..++..++++..+.++.++++|++|+++++++++++.++ +|
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGAT-VYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999985 5556665 3345566667666788999999999999999999999886 89
Q ss_pred CeeEEEEccc--cc-----CcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC
Q psy616 313 PIDGVLHIAG--IS-----GLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 385 (1152)
Q Consensus 313 ~idgvIh~AG--~~-----~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g 385 (1152)
+||+|||||| +. . ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..+.||++||+++..+. +
T Consensus 83 ~id~lvnnAg~g~~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~-~ 157 (260)
T 2qq5_A 83 RLDVLVNNAYAGVQTILNTR-NKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA---GQGLIVVISSPGSLQYM-F 157 (260)
T ss_dssp CCCEEEECCCTTHHHHHHTT-TCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG---TCCEEEEECCGGGTSCC-S
T ss_pred CceEEEECCccccccccccC-CCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc---CCcEEEEEcChhhcCCC-C
Confidence 9999999995 43 2 4567788999999999999999999999999997543 34789999999988754 4
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc----hhHHh--hcCC-CCCCHHHHHHHH
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT----DFYFK--SSKQ-KVLHENDGLKLF 458 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~----~~~~~--~~g~-~~l~~~e~~~~l 458 (1152)
...|+++|++++.|++.++.+.. ..++++.+|.+|... +.|........ ..... ...+ +..+|+|..+.+
T Consensus 158 ~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v 234 (260)
T 2qq5_A 158 NVPYGVGKAACDKLAADCAHELR--RHGVSCVSLWPGIVQ-TELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCV 234 (260)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEECCCSC-TTTC----------------------CHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHhc--cCCeEEEEEecCccc-cHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHH
Confidence 68999999999999999887643 335688999988664 55532211000 00000 0000 124688888888
Q ss_pred HHHHhcC
Q psy616 459 EQLLIQD 465 (1152)
Q Consensus 459 ~~~l~~~ 465 (1152)
..++...
T Consensus 235 ~~l~s~~ 241 (260)
T 2qq5_A 235 VALATDP 241 (260)
T ss_dssp HHHHTCT
T ss_pred HHHhcCc
Confidence 8777543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=6.8e-22 Score=226.29 Aligned_cols=186 Identities=16% Similarity=0.089 Sum_probs=151.9
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH------hCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK------KFNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~------~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
++++|||||+||||+++|++|+++|++++++..+....+...+.++ ..+.++.++.+|++|.++++++++++
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-- 79 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-- 79 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH--
Confidence 6899999999999999999999999875554433222222222222 22467999999999999999999988
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
.+|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.++...|
T Consensus 80 ~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~---~~g~IV~isS~~~~~~~~~~~~Y 155 (327)
T 1jtv_A 80 TEGRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR---GSGRVLVTGSVGGLMGLPFNDVY 155 (327)
T ss_dssp TTSCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEEEEGGGTSCCTTCHHH
T ss_pred hcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCEEEEECCcccccCCCCChHH
Confidence 3589999999999876 6788899999999999999999999999999998753 34679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 430 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 430 (1152)
+++|++++.|++.++.+.. ..++++.+|.+|... +.|.
T Consensus 156 ~aSK~a~~~~~~~la~el~--~~gI~v~~v~PG~v~-T~~~ 193 (327)
T 1jtv_A 156 CASKFALEGLCESLAVLLL--PFGVHLSLIECGPVH-TAFM 193 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-C---
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCcEEEEEEeCccc-ChHH
Confidence 9999999999999887643 335688999988764 4553
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.8e-22 Score=216.88 Aligned_cols=226 Identities=13% Similarity=0.026 Sum_probs=171.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||+||||+++|+.|+++|+ +|++++|+.. .+...+ ++..+.++.++ |.++++++++++.+++|++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD 74 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVD 74 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCC
Confidence 6899999999999999999999998 5666666643 344433 66556665554 66778899999999999999
Q ss_pred EEEEccccc-CcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 316 GVLHIAGIS-GLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 316 gvIh~AG~~-~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
+||||||+. . ..++.+.+.++|++++++|+.|++++.++++|.|++. ..+.||++||.++..+.+++..|+++|+
T Consensus 75 ~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 150 (254)
T 1zmt_A 75 VLVSNDIFAPE-FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR---KSGHIIFITSATPFGPWKELSTYTSARA 150 (254)
T ss_dssp EEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCSTTTSCCTTCHHHHHHHH
T ss_pred EEEECCCcCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEECCcccccCCCCchHHHHHHH
Confidence 999999987 5 6788899999999999999999999999999998754 2467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCccc--------CccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWN--------NSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~--------~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++|++.++.+.. ..++++.+|.+|... ++.|................+ +..+++|..+.+..++...
T Consensus 151 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 228 (254)
T 1zmt_A 151 GACTLANALSKELG--EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGS 228 (254)
T ss_dssp HHHHHHHHHHHHHG--GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhh--hcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999999887643 335688888887762 333432211111111111121 3568999999998887643
Q ss_pred c----eeeeeechh
Q psy616 466 K----IQYLVLSGE 475 (1152)
Q Consensus 466 ~----~~~~v~~~~ 475 (1152)
. .+.+.+++.
T Consensus 229 ~~~~tG~~~~vdgG 242 (254)
T 1zmt_A 229 CDYLTGQVFWLAGG 242 (254)
T ss_dssp CGGGTTCEEEESTT
T ss_pred cCCccCCEEEECCC
Confidence 2 245555544
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-21 Score=212.75 Aligned_cols=218 Identities=13% Similarity=0.134 Sum_probs=171.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcE-EEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKA-IYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v-~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+||||+++|++|+++|++ |++++|+.. .++..+++ +.++ .++.+|++|.++++++++++.+ ++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 84 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGAR-LILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEA-VA 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHh-hC
Confidence 5789999999999999999999999975 666666632 23333333 4567 8899999999999999999988 99
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC--hhhh
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYA 390 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~--~~Ya 390 (1152)
++|+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|.|++. ..++||++||.++..+.++. ..|+
T Consensus 85 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~~~Y~ 160 (254)
T 2wsb_A 85 PVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR---GAGAIVNLGSMSGTIVNRPQFASSYM 160 (254)
T ss_dssp CCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCSSSCBHHHH
T ss_pred CCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCcEEEEEecchhccCCCCCcchHHH
Confidence 9999999999987 6778889999999999999999999999999998754 35679999999999998888 9999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcC-CCCCCHHHHHHHHHHHHhc
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSK-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
++|++++.|++.++.+.. ..++++.+|.+|.... .|..... ........... ....++++..+.+..++..
T Consensus 161 ~sK~a~~~~~~~~~~~~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 235 (254)
T 2wsb_A 161 ASKGAVHQLTRALAAEWA--GRGVRVNALAPGYVAT-EMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASP 235 (254)
T ss_dssp HHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBCS-HHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHh--hcCeEEEEEEecccCc-hhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 999999999998877643 2356888898877643 3322110 11111111111 2357899999999888754
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.5e-21 Score=215.80 Aligned_cols=234 Identities=14% Similarity=0.092 Sum_probs=180.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-----CCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-----FNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-----~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
.++++|||||+||||+++|+.|+++|+. |++++|+ +..++..++++. .+.++.++.+|++|.++++++++++.
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSN-VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999985 5566666 344555666665 46789999999999999999999999
Q ss_pred hhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 309 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 309 ~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|.+.. .+.||++||.+ ..+.+++..
T Consensus 96 ~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~iv~isS~~-~~~~~~~~~ 170 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH---GGSIVNIIVPT-KAGFPLAVH 170 (303)
T ss_dssp HHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH---CEEEEEECCCC-TTCCTTCHH
T ss_pred HHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc---CCeEEEEEeec-ccCCCcchh
Confidence 99999999999999876 67788999999999999999999999999999654322 46799999998 888899999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcc-ccccc---cccchhHHhhcC-CCCCCHHHHHHHHHHHHh
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSK-FKIGN---NEQTDFYFKSSK-QKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~G-m~~~~---~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~ 463 (1152)
|+++|+++.+|++.++.+.. ..++++.+|.+|.....+ |.... ............ -+...+++..+++..++.
T Consensus 171 Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~ 248 (303)
T 1yxm_A 171 SGAARAGVYNLTKSLALEWA--CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLS 248 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHhc--ccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhC
Confidence 99999999999999887743 235688888888765432 22110 000111111111 135789999999998885
Q ss_pred cCc----eeeeeechhh
Q psy616 464 QDK----IQYLVLSGEL 476 (1152)
Q Consensus 464 ~~~----~~~~v~~~~~ 476 (1152)
... .+.+.+++.+
T Consensus 249 ~~~~~~~G~~~~v~gG~ 265 (303)
T 1yxm_A 249 PAASFITGQSVDVDGGR 265 (303)
T ss_dssp GGGTTCCSCEEEESTTG
T ss_pred cccccCCCcEEEECCCe
Confidence 432 3555555554
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-21 Score=214.46 Aligned_cols=226 Identities=12% Similarity=0.081 Sum_probs=170.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC--CCcEEEEEecCCCH-HHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDK-LKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~-~~v~~~~~~~~~~~ 311 (1152)
+++++|||||+||||+++|+.|+++|+.+|++++|+... +..+++.+. +.++.++.+|++|+ ++++++++++.+++
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 478999999999999999999999999767777776532 333444433 56789999999998 99999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||+.. .++|++++++|+.|++++.++++|.|++....+.+.||++||+++..+.+++..|++
T Consensus 83 g~id~lv~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 153 (254)
T 1sby_A 83 KTVDILINGAGILD---------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSA 153 (254)
T ss_dssp SCCCEEEECCCCCC---------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHH
T ss_pred CCCCEEEECCccCC---------HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHH
Confidence 99999999999742 356899999999999999999999986543223578999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc------ccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN------EQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~------~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+|++++.|++.++.+.. ..++++.+|.+|... +.|..... ....... ......+++++.+.+..++...
T Consensus 154 sK~a~~~~~~~la~~~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dvA~~i~~~~~~~ 228 (254)
T 1sby_A 154 SKAAVVSFTNSLAKLAP--ITGVTAYSINPGITR-TPLVHTFNSWLDVEPRVAELL--LSHPTQTSEQCGQNFVKAIEAN 228 (254)
T ss_dssp HHHHHHHHHHHHHHHHH--HHSEEEEEEEECSEE-SHHHHSCCCGGGSCTTHHHHH--TTSCCEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhc--cCCeEEEEEecCCcc-CccccccchhhhhhHHHHHHH--hcCCCCCHHHHHHHHHHHHHcC
Confidence 99999999998876422 124588888877664 44432211 0011111 1223358999999988887543
Q ss_pred c-eeeeeechh
Q psy616 466 K-IQYLVLSGE 475 (1152)
Q Consensus 466 ~-~~~~v~~~~ 475 (1152)
. .+.+.+++.
T Consensus 229 ~~G~~~~v~gG 239 (254)
T 1sby_A 229 KNGAIWKLDLG 239 (254)
T ss_dssp CTTCEEEEETT
T ss_pred CCCCEEEEeCC
Confidence 2 344545443
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=223.76 Aligned_cols=212 Identities=17% Similarity=0.173 Sum_probs=170.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEe--------cCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILS--------GRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEIN 305 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~--------~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~ 305 (1152)
.++++|||||+||||+++|+.|+++|++++++. +|+ +..++..++++..+..+ .+|++|.++++++++
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~~~~ 84 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEKLVK 84 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHHHHH
Confidence 579999999999999999999999998555542 333 23355566777666543 489999999999999
Q ss_pred HHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC
Q psy616 306 SIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 385 (1152)
Q Consensus 306 ~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g 385 (1152)
++.+++|+||+||||||+.. ..++.+.+.++|+.++++|+.|++++.++++|+|++. ..++||++||+++..|.++
T Consensus 85 ~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---~~grIV~vsS~~~~~~~~~ 160 (319)
T 1gz6_A 85 TALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ---NYGRIIMTASASGIYGNFG 160 (319)
T ss_dssp HHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHHCCTT
T ss_pred HHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCCEEEEECChhhccCCCC
Confidence 99999999999999999987 6778899999999999999999999999999998754 3468999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+..|+++|+++..|++.++.+.. ..++++.+|.+|.+ +.|...... .... ..++|+++...+..++..
T Consensus 161 ~~~Y~aSK~a~~~~~~~la~el~--~~gI~vn~v~PG~~--t~~~~~~~~--~~~~-----~~~~p~dvA~~~~~l~s~ 228 (319)
T 1gz6_A 161 QANYSAAKLGLLGLANTLVIEGR--KNNIHCNTIAPNAG--SRMTETVMP--EDLV-----EALKPEYVAPLVLWLCHE 228 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEEECC--STTTGGGSC--HHHH-----HHSCGGGTHHHHHHHTST
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc--ccCEEEEEEeCCCc--cccccccCC--hhhh-----ccCCHHHHHHHHHHHhCc
Confidence 99999999999999999987753 34568888888765 334321100 1111 136889999888887754
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.6e-21 Score=212.77 Aligned_cols=233 Identities=15% Similarity=0.177 Sum_probs=176.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+||||+++|++|+++|+ +|++++|+.. .++..+++.. ..++.++.+|++|+++++++++++.+++|+
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 92 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKHGK 92 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999998 5555666642 2334444432 237899999999999999999999999999
Q ss_pred eeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-CChhhhH
Q psy616 314 IDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-g~~~Yaa 391 (1152)
+|+||||||+... ..++.+.+.++|++++++|+.|++++.+++.|.|++. ..++||++||.++..+.+ +...|++
T Consensus 93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~~Y~~ 169 (278)
T 2bgk_A 93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA---KKGSIVFTASISSFTAGEGVSHVYTA 169 (278)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG---TCEEEEEECCGGGTCCCTTSCHHHHH
T ss_pred CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc---CCCeEEEEeeccccCCCCCCCcchHH
Confidence 9999999998641 2567889999999999999999999999999997542 356899999999998888 8899999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---c-chhHHhhc---CCCCCCHHHHHHHHHHHHhc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---Q-TDFYFKSS---KQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~-~~~~~~~~---g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+|++++.|++.++.+.. ..++++.+|.+|.+.. .|...... . ........ ....+.+++..+.+..++..
T Consensus 170 sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 246 (278)
T 2bgk_A 170 TKHAVLGLTTSLCTELG--EYGIRVNCVSPYIVAS-PLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGD 246 (278)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEESCCSC-CCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHh--hcCcEEEEEEeceecc-hhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCc
Confidence 99999999999887632 2345888888887654 33221111 0 01111111 12367999999999988854
Q ss_pred Cc----eeeeeechh
Q psy616 465 DK----IQYLVLSGE 475 (1152)
Q Consensus 465 ~~----~~~~v~~~~ 475 (1152)
.. .+.+.+++.
T Consensus 247 ~~~~~~G~~~~v~gg 261 (278)
T 2bgk_A 247 ESKYVSGLNLVIDGG 261 (278)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred ccccCCCCEEEECCc
Confidence 31 345555544
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-21 Score=213.13 Aligned_cols=216 Identities=15% Similarity=0.086 Sum_probs=174.4
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYS--TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga--~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+++++|||||+||||+++|++|+++|+ .+|++++|+....+..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 98 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 98 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence 4678999999999999999999999994 46777777643322345555557789999999999999999999999999
Q ss_pred C--CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHh------cC--CCCCEEEEecCCcccc
Q psy616 312 G--PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKL------QK--NKLDFVCYFSSSSAIL 381 (1152)
Q Consensus 312 G--~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~------~~--~~~~~iV~~SS~a~~~ 381 (1152)
| ++|+||||||+.....++.+.+.++|++++++|+.|++++.+++.|.|++. .. ...+.||++||..+..
T Consensus 99 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 178 (267)
T 1sny_A 99 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 178 (267)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccc
Confidence 9 899999999986524577889999999999999999999999999998764 10 0146899999999988
Q ss_pred CCC---CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHH
Q psy616 382 GDF---GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLF 458 (1152)
Q Consensus 382 g~~---g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l 458 (1152)
+.+ ++..|+++|++++.|++.++.+.. ..++++.+|.+|.. .+.|... ..+++++++.+.+
T Consensus 179 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v-~t~~~~~-------------~~~~~~~~~a~~~ 242 (267)
T 1sny_A 179 QGNTDGGMYAYRTSKSALNAATKSLSVDLY--PQRIMCVSLHPGWV-KTDMGGS-------------SAPLDVPTSTGQI 242 (267)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEECCCSB-CSTTTCT-------------TCSBCHHHHHHHH
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHHHHhh--cCCcEEEEeCCcce-ecCCCCC-------------CCCCCHHHHHHHH
Confidence 764 788999999999999998877643 23568889988765 4455311 2368999999999
Q ss_pred HHHHhcC
Q psy616 459 EQLLIQD 465 (1152)
Q Consensus 459 ~~~l~~~ 465 (1152)
..++...
T Consensus 243 ~~~~~~~ 249 (267)
T 1sny_A 243 VQTISKL 249 (267)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 8888654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.87 E-value=8e-22 Score=242.75 Aligned_cols=222 Identities=18% Similarity=0.221 Sum_probs=176.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC----------cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS----------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEI 304 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~----------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~ 304 (1152)
.++++|||||++|||+++|+.|+++|+++++. .|+ +..++..+++++.|.++. +|++|.+++++++
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~-~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~v 82 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVN-DLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKIV 82 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-CC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEE-eCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHHH
Confidence 57999999999999999999999999965554 432 334566677877776543 6888888899999
Q ss_pred HHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC
Q psy616 305 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 384 (1152)
Q Consensus 305 ~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~ 384 (1152)
+++.++||+||+||||||+.. ..++.+++.++|++++++|+.|++++.++++|+|++.. .+.||++||+++..|.+
T Consensus 83 ~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~---~G~IVnisS~ag~~~~~ 158 (604)
T 2et6_A 83 ETAVKNFGTVHVIINNAGILR-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK---YGRIVNTSSPAGLYGNF 158 (604)
T ss_dssp HHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHHCCT
T ss_pred HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CCEEEEECCHHHcCCCC
Confidence 999999999999999999987 78899999999999999999999999999999997642 46799999999999999
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
++++|+++|+++.+|++.++.+.. ..++++.+|.++. .+.|...... ... ...++|++....+..++..
T Consensus 159 ~~~~Y~asKaal~~lt~~la~El~--~~gIrVn~v~Pg~--~T~m~~~~~~--~~~-----~~~~~pe~vA~~v~~L~s~ 227 (604)
T 2et6_A 159 GQANYASAKSALLGFAETLAKEGA--KYNIKANAIAPLA--RSRMTESIMP--PPM-----LEKLGPEKVAPLVLYLSSA 227 (604)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECC--CCHHHHTTSC--HHH-----HTTCSHHHHHHHHHHHTSS
T ss_pred CchHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEEccCC--cCccccccCC--hhh-----hccCCHHHHHHHHHHHhCC
Confidence 999999999999999999998865 4567888888863 4455321110 111 1236899999998887754
Q ss_pred C---ceeeeeechh
Q psy616 465 D---KIQYLVLSGE 475 (1152)
Q Consensus 465 ~---~~~~~v~~~~ 475 (1152)
. ..+.+.+++.
T Consensus 228 ~~~itG~~~~vdgG 241 (604)
T 2et6_A 228 ENELTGQFFEVAAG 241 (604)
T ss_dssp SCCCCSCEEEEETT
T ss_pred cccCCCCEEEECCC
Confidence 3 1244555544
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-21 Score=210.21 Aligned_cols=212 Identities=13% Similarity=0.119 Sum_probs=165.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+||||++++++|+++|. .+|+++.|+....+ ++.. .+.++.++.+|++|.++++++++++.+++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~---~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT---ELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH---HHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH---HHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence 368999999999999999999999994 46777777643222 2222 266899999999999999999999999998
Q ss_pred --CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHh------cC--CCCCEEEEecCCccccC
Q psy616 313 --PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKL------QK--NKLDFVCYFSSSSAILG 382 (1152)
Q Consensus 313 --~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~------~~--~~~~~iV~~SS~a~~~g 382 (1152)
++|+||||||+.....++.+.+.++|++++++|+.|++++.++++|.|++. .. ...+.||++||..+..+
T Consensus 79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 158 (250)
T 1yo6_A 79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT 158 (250)
T ss_dssp GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred CCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence 999999999986524567888999999999999999999999999998754 10 11568999999999888
Q ss_pred C-------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHH
Q psy616 383 D-------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGL 455 (1152)
Q Consensus 383 ~-------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~ 455 (1152)
. ++...|+++|++++.|++.++.+.. ..++++.+|.+|.. .+.|... ...++++++.
T Consensus 159 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v-~t~~~~~-------------~~~~~~~~~a 222 (250)
T 1yo6_A 159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK--DDNVLVVNFCPGWV-QTNLGGK-------------NAALTVEQST 222 (250)
T ss_dssp TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG--GGTCEEEEEECCCC---------------------------HHHH
T ss_pred CcccccccCCccHHHHHHHHHHHHHHHHHHHhc--cCCeEEEEEcCCce-ecCCCCC-------------CCCCCHHHHH
Confidence 7 6889999999999999999887643 33568889988766 4444311 1357899999
Q ss_pred HHHHHHHhcC
Q psy616 456 KLFEQLLIQD 465 (1152)
Q Consensus 456 ~~l~~~l~~~ 465 (1152)
+.+..++...
T Consensus 223 ~~~~~~~~~~ 232 (250)
T 1yo6_A 223 AELISSFNKL 232 (250)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhcc
Confidence 9999888654
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=213.10 Aligned_cols=222 Identities=16% Similarity=0.183 Sum_probs=171.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||++|||+++|+.|++++..+|++..|++.. ...++.++++|++|+++++++++.+. ++++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~---------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~i 71 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF---------SAENLKFIKADLTKQQDITNVLDIIK--NVSF 71 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC---------CCTTEEEEECCTTCHHHHHHHHHHTT--TCCE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc---------ccccceEEecCcCCHHHHHHHHHHHH--hCCC
Confidence 478999999999999999999999555677777776431 12357899999999999999996554 7899
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|+|++ .+.||++||.++..+.+++..|+++|+
T Consensus 72 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~~~~Y~asKa 145 (244)
T 4e4y_A 72 DGIFLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV-----GASIVFNGSDQCFIAKPNSFAYTLSKG 145 (244)
T ss_dssp EEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE-----EEEEEEECCGGGTCCCTTBHHHHHHHH
T ss_pred CEEEECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc-----CcEEEEECCHHHccCCCCCchhHHHHH
Confidence 99999999987 678899999999999999999999999999887532 267999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc------------cchhHHhhcC-CCCCCHHHHHHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE------------QTDFYFKSSK-QKVLHENDGLKLFEQL 461 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~------------~~~~~~~~~g-~~~l~~~e~~~~l~~~ 461 (1152)
++++|++.++.+.. ..++++.+|.+|... +.|...... .......... -+..+|+|..+++..+
T Consensus 146 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l 222 (244)
T 4e4y_A 146 AIAQMTKSLALDLA--KYQIRVNTVCPGTVD-TDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFL 222 (244)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEESCBC-CHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HcCeEEEEEecCccC-chhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999987643 345688899888775 344221100 0011111111 1346899999999988
Q ss_pred HhcCc----eeeeeechhh
Q psy616 462 LIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 462 l~~~~----~~~~v~~~~~ 476 (1152)
+.... .+.+.+++.+
T Consensus 223 ~s~~~~~itG~~i~vdGG~ 241 (244)
T 4e4y_A 223 LSDKSKFMTGGLIPIDGGY 241 (244)
T ss_dssp HSGGGTTCCSCEEEESTTG
T ss_pred hcCccccccCCeEeECCCc
Confidence 86442 3555555543
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=213.99 Aligned_cols=225 Identities=13% Similarity=0.149 Sum_probs=168.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||+||||+++|+.|+++|+ +|++++|+... .+++... .++.++.+|++|+++++ ++.+++|++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~---~~~~~~~-~~~~~~~~D~~~~~~~~----~~~~~~~~i 75 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESK---LQELEKY-PGIQTRVLDVTKKKQID----QFANEVERL 75 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHH---HGGGGGS-TTEEEEECCTTCHHHHH----HHHHHCSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHH---HHHHHhc-cCceEEEeeCCCHHHHH----HHHHHhCCC
Confidence 478999999999999999999999997 56666666421 1222222 26889999999999987 444567999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-CChhhhHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-GSCDYAMGN 393 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-g~~~Yaaan 393 (1152)
|+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.+ +...|+++|
T Consensus 76 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~~Y~~sK 151 (246)
T 2ag5_A 76 DVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ---KSGNIINMSSVASSVKGVVNRCVYSTTK 151 (246)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred CEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCceEEEEechHhCcCCCCCCccHHHHH
Confidence 99999999987 6788899999999999999999999999999998754 346799999999998888 999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc-c------cccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-N------NEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~------~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.|++.++.+.. ..++++.+|.+|.... .|... . ........+... -+..+++|..+++..++...
T Consensus 152 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~ 228 (246)
T 2ag5_A 152 AAVIGLTKSVAADFI--QQGIRCNCVCPGTVDT-PSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE 228 (246)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEESCEEC-HHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhh--hcCcEEEEEeeCcCcC-cchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence 999999999887643 3356888898877653 33211 0 000011111111 13568999999998887543
Q ss_pred c----eeeeeechh
Q psy616 466 K----IQYLVLSGE 475 (1152)
Q Consensus 466 ~----~~~~v~~~~ 475 (1152)
. .+.+.+++.
T Consensus 229 ~~~~tG~~i~vdgG 242 (246)
T 2ag5_A 229 SAYVTGNPVIIDGG 242 (246)
T ss_dssp GTTCCSCEEEECTT
T ss_pred ccCCCCCEEEECCC
Confidence 2 345555554
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=213.51 Aligned_cols=213 Identities=9% Similarity=-0.074 Sum_probs=163.7
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEe-c--CCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILS-G--RSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~-~--R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
++++|||||+||||+++|+.|+++|++ |+++ + |+.. .++..+++ .+ +|+.|.++++++++++.+++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~ 70 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYT-VVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHG 70 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCE-EEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999985 5555 5 6632 23333333 23 23447788999999999999
Q ss_pred CCeeEEEEcccccCcC---cccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChh
Q psy616 312 GPIDGVLHIAGISGLT---SNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~---~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
|++|+||||||+.. . .++.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||.++..+.+++..
T Consensus 71 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~---~~g~iv~isS~~~~~~~~~~~~ 146 (244)
T 1zmo_A 71 EAIDTIVSNDYIPR-PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA---GGASVIFITSSVGKKPLAYNPL 146 (244)
T ss_dssp SCEEEEEECCCCCT-TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCGGGTSCCTTCTT
T ss_pred CCCCEEEECCCcCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEECChhhCCCCCCchH
Confidence 99999999999877 6 788899999999999999999999999999998653 3578999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccc---cccc--ccchhHHh-hcC-CCCCCHHHHHHHHHHH
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK---IGNN--EQTDFYFK-SSK-QKVLHENDGLKLFEQL 461 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~---~~~~--~~~~~~~~-~~g-~~~l~~~e~~~~l~~~ 461 (1152)
|+++|+++++|++.++.+.. ..++++.+|.+|... +.|. .... ........ ... -+..+|+|..+.+..+
T Consensus 147 Y~asK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l 223 (244)
T 1zmo_A 147 YGPARAATVALVESAAKTLS--RDGILLYAIGPNFFN-NPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFL 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBC-BTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh--hcCcEEEEEeeCCCc-CCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999887643 335688899887664 4553 2110 10111111 112 2357899999999888
Q ss_pred HhcC
Q psy616 462 LIQD 465 (1152)
Q Consensus 462 l~~~ 465 (1152)
+...
T Consensus 224 ~s~~ 227 (244)
T 1zmo_A 224 ASRR 227 (244)
T ss_dssp HTTT
T ss_pred cCcc
Confidence 7643
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=210.64 Aligned_cols=208 Identities=11% Similarity=0.059 Sum_probs=164.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc--C
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI--G 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~--G 312 (1152)
+++++|||||+||||+++|++|+++|+ +|++++|++... ...+.++.+|++|+++++++++++.+++ |
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g 71 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQ---------ADSNILVDGNKNWTEQEQSILEQTASSLQGS 71 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTT---------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCcccc---------ccccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 368999999999999999999999987 556666664321 1246778999999999999999999999 7
Q ss_pred CeeEEEEcccccCcCccc-ccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 313 PIDGVLHIAGISGLTSNI-LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~-~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
++|+||||||+.. ..++ .+.+.++|++++++|+.|++++.+++.|.|++ .++||++||.++..+.++...|++
T Consensus 72 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~Y~~ 145 (236)
T 1ooe_A 72 QVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-----GGLLQLTGAAAAMGPTPSMIGYGM 145 (236)
T ss_dssp CEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCGGGGSCCTTBHHHHH
T ss_pred CCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-----CCEEEEECchhhccCCCCcHHHHH
Confidence 9999999999876 5666 78889999999999999999999999998632 368999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+|++++.|++.++.+......++++.+|.+|.. .+.|........ .-...+++++..+.+...|.++
T Consensus 146 sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~------~~~~~~~~~dvA~~i~~~l~s~ 212 (236)
T 1ooe_A 146 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL-DTPMNRKWMPNA------DHSSWTPLSFISEHLLKWTTET 212 (236)
T ss_dssp HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCB-CCHHHHHHSTTC------CGGGCBCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHhcccCCCeEEEEEecCcc-cCcchhhcCCCc------cccccCCHHHHHHHHHHHHcCC
Confidence 999999999999876421134578889988755 444432100000 0012468899999988777443
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=215.84 Aligned_cols=187 Identities=10% Similarity=-0.098 Sum_probs=152.4
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHH-cCCcEEEEecCCcch------------HHHHHHHHhCCCcEEEEEecCCCHHHH
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLIN-KYSTNLILSGRSKLN------------SIIYKKLKKFNNKAIYIQVDVSDKLKM 300 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~-~Ga~~vil~~R~~~~------------~~~~~~l~~~g~~v~~~~~Dvsd~~~v 300 (1152)
..+|++|||||++|||+++|+.|++ +|++++++..+.+.. +...+.+++.|.++..+.+|++|++++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v 124 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK 124 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 4689999999999999999999999 998655544333322 123445677788999999999999999
Q ss_pred HHHHHHHHhhcCCeeEEEEcccccC------------cCccc---------------------ccCCHHHHHHHHhhhch
Q psy616 301 ISEINSIINNIGPIDGVLHIAGISG------------LTSNI---------------------LEANYKNFYSVLSSKIS 347 (1152)
Q Consensus 301 ~~~~~~~~~~~G~idgvIh~AG~~~------------~~~~~---------------------~~~~~e~~~~~~~~kv~ 347 (1152)
+++++++.++||+||+||||||+.. ..+++ .+.+.++|++++++|..
T Consensus 125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~ 204 (405)
T 3zu3_A 125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG 204 (405)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence 9999999999999999999999841 02344 77899999999999999
Q ss_pred HHH-HHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC--hhhhHHHHHHHHHHHHHHhcccccCC-CceEEEEeCCc
Q psy616 348 GTI-ALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAMGNRFQTVYAKYLNNKNIYKKY-TNKLITINWPL 423 (1152)
Q Consensus 348 g~~-~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~--~~Yaaana~l~~la~~~~~~g~~~~~-~~~~~si~wg~ 423 (1152)
+.| .+.+++.+.+ +.. ..+.||++||+++..+.+++ +.|+++|++|.+|++.++.+.. .. ++++.+|.+|.
T Consensus 205 ~~~~~~~~~~~~~~--m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela--~~~GIRVNaVaPG~ 279 (405)
T 3zu3_A 205 EDWQMWIDALLDAG--VLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLA--AHGGGDARVSVLKA 279 (405)
T ss_dssp HHHHHHHHHHHHHT--CEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH--TTTSCEEEEEECCC
T ss_pred hHHHHHHHHHHHHh--hhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhC--cccCeEEEEEEeCC
Confidence 998 7777765432 111 24789999999999998887 9999999999999999998754 45 67899999887
Q ss_pred cc
Q psy616 424 WN 425 (1152)
Q Consensus 424 w~ 425 (1152)
..
T Consensus 280 i~ 281 (405)
T 3zu3_A 280 VV 281 (405)
T ss_dssp CC
T ss_pred Cc
Confidence 75
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=211.30 Aligned_cols=209 Identities=12% Similarity=0.067 Sum_probs=165.3
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc--
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-- 311 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-- 311 (1152)
.+++++|||||+||||+++|+.|+++|++ |++++|+..... ..+.++.+|++|+++++++++++.+++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 74 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWW-VASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGD 74 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCE-EEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 45789999999999999999999999975 555666543210 246778999999999999999999999
Q ss_pred CCeeEEEEcccccCcCccc-ccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 312 GPIDGVLHIAGISGLTSNI-LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~-~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
|++|+||||||+.. ..++ .+.+.++|++++++|+.|++++.+++.|.|++ .+.||++||.++..+.+++..|+
T Consensus 75 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~Y~ 148 (241)
T 1dhr_A 75 QKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-----GGLLTLAGAKAALDGTPGMIGYG 148 (241)
T ss_dssp CCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCGGGGSCCTTBHHHH
T ss_pred CCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-----CCEEEEECCHHHccCCCCchHHH
Confidence 79999999999876 5666 78899999999999999999999999998632 36899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++|++++.|++.++.+......++++.+|.+|.. ++.|....... .. + ...+++++..+.+..++...
T Consensus 149 asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v-~T~~~~~~~~~-~~-~----~~~~~~~~vA~~v~~l~~~~ 216 (241)
T 1dhr_A 149 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL-DTPMNRKSMPE-AD-F----SSWTPLEFLVETFHDWITGN 216 (241)
T ss_dssp HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCE-ECHHHHHHSTT-SC-G----GGSEEHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcc-cCccccccCcc-hh-h----ccCCCHHHHHHHHHHHhcCC
Confidence 9999999999999876421134578888988755 44443211000 00 0 12467899999998887543
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=5e-21 Score=221.22 Aligned_cols=191 Identities=13% Similarity=-0.082 Sum_probs=152.1
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHH-cCCcEEEEecCCcchH------------HHHHHHHhCCCcEEEEEecCCCHHHH
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLIN-KYSTNLILSGRSKLNS------------IIYKKLKKFNNKAIYIQVDVSDKLKM 300 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~-~Ga~~vil~~R~~~~~------------~~~~~l~~~g~~v~~~~~Dvsd~~~v 300 (1152)
+.+|++|||||++|||+++|+.|++ .|++++++..+.+..+ ...+.+++.|.++..+++|++|++++
T Consensus 59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v 138 (422)
T 3s8m_A 59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR 138 (422)
T ss_dssp SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence 4589999999999999999999999 9986555443333221 23456777888999999999999999
Q ss_pred HHHHHHHHhhc-CCeeEEEEccccc------------CcCccc---------------------ccCCHHHHHHHHhhhc
Q psy616 301 ISEINSIINNI-GPIDGVLHIAGIS------------GLTSNI---------------------LEANYKNFYSVLSSKI 346 (1152)
Q Consensus 301 ~~~~~~~~~~~-G~idgvIh~AG~~------------~~~~~~---------------------~~~~~e~~~~~~~~kv 346 (1152)
+++++++.++| |+||+||||||+. ....++ .+++.++|++++++|.
T Consensus 139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~ 218 (422)
T 3s8m_A 139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG 218 (422)
T ss_dssp HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence 99999999999 9999999999972 002233 3689999999999999
Q ss_pred hHHH-HHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC--hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCc
Q psy616 347 SGTI-ALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPL 423 (1152)
Q Consensus 347 ~g~~-~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~--~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~ 423 (1152)
.+.| .+.+.+.+.+. . ...+.||++||+++..+.+++ ++|+++|++|.+|++.++.+.. ..++++.+|.+|.
T Consensus 219 ~~~~~~~~~a~~~~~m--~-~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela--~~GIRVNaVaPG~ 293 (422)
T 3s8m_A 219 GQDWELWIDALEGAGV--L-ADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLA--KHGGGANVAVLKS 293 (422)
T ss_dssp SHHHHHHHHHHHHTTC--E-EEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECC
T ss_pred hhHHHHHHHHHHHHHH--h-hCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhC--ccCEEEEEEEcCC
Confidence 9998 77777654321 1 124789999999999988765 9999999999999999998754 4567888998887
Q ss_pred ccCcccc
Q psy616 424 WNNSKFK 430 (1152)
Q Consensus 424 w~~~Gm~ 430 (1152)
.. +.|.
T Consensus 294 i~-T~~~ 299 (422)
T 3s8m_A 294 VV-TQAS 299 (422)
T ss_dssp CC-CTTG
T ss_pred Cc-Chhh
Confidence 75 4443
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=210.33 Aligned_cols=230 Identities=13% Similarity=0.130 Sum_probs=174.0
Q ss_pred CCCEEEEECC--chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg--~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l-~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++||||| ++|||+++|+.|+++|++ |++++|+... ..+++ +..+.++.++++|++|+++++++++++.+++
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~-V~~~~r~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQ-LVLTGFDRLR--LIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI 82 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCE-EEEEECSCHH--HHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCE-EEEEecChHH--HHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999999 999999999999999985 5666665421 11222 2345678899999999999999999999999
Q ss_pred C---CeeEEEEcccccCc----CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC
Q psy616 312 G---PIDGVLHIAGISGL----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 384 (1152)
Q Consensus 312 G---~idgvIh~AG~~~~----~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~ 384 (1152)
| ++|+||||||+... ..++.+.+.++|++++++|+.|++++.++++|+|++ .+.||++||..+ .+.+
T Consensus 83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~iss~~~-~~~~ 156 (269)
T 2h7i_A 83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-----GGSIVGMDFDPS-RAMP 156 (269)
T ss_dssp CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEEECCCS-SCCT
T ss_pred CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-----CCeEEEEcCccc-cccC
Confidence 9 99999999998641 256788999999999999999999999999988632 268999999876 6788
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-----ccc--------chhHHhhcCC--CCC
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----NEQ--------TDFYFKSSKQ--KVL 449 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----~~~--------~~~~~~~~g~--~~l 449 (1152)
++..|+++|+++++|++.++.+.. ..++++.+|.+|... +.|.... ... .........+ +..
T Consensus 157 ~~~~Y~asKaa~~~l~~~la~e~~--~~gi~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~ 233 (269)
T 2h7i_A 157 AYNWMTVAKSALESVNRFVAREAG--KYGVRSNLVAAGPIR-TLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMK 233 (269)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCCC-CHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhc--ccCcEEEEEecCccc-chhhhccccccchhhHHHHHHHHHHhhhccCCcccCCC
Confidence 999999999999999999887743 345688899888664 4442210 010 0011122223 356
Q ss_pred CHHHHHHHHHHHHhcCc----eeeeeechhh
Q psy616 450 HENDGLKLFEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 450 ~~~e~~~~l~~~l~~~~----~~~~v~~~~~ 476 (1152)
+|+|..+++..++.... .+.+.+++.+
T Consensus 234 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 234 DATPVAKTVCALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp CCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred CHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence 88999999988876432 2556666544
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=209.35 Aligned_cols=218 Identities=17% Similarity=0.180 Sum_probs=164.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||+||||+++|+.|+++|++ |+++.|+. ..++..+++... +.++.++.+|++|+++++++++++.+++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999985 55556653 334445555443 4578999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|++|+||||||+.. .++|++++++|+.|++.+.+.++|.|++....+.+.||++||+++..+.++...|++
T Consensus 85 g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 155 (267)
T 2gdz_A 85 GRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA 155 (267)
T ss_dssp SCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred CCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH
Confidence 99999999999753 246899999999999999999999986543223578999999999999999999999
Q ss_pred HHHHHHHHHHHH--HhcccccCCCceEEEEeCCcccCcccccccccc--c-------hhHHhhcC-CCCCCHHHHHHHHH
Q psy616 392 GNRFQTVYAKYL--NNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ--T-------DFYFKSSK-QKVLHENDGLKLFE 459 (1152)
Q Consensus 392 ana~l~~la~~~--~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~--~-------~~~~~~~g-~~~l~~~e~~~~l~ 459 (1152)
+|++++.|++.+ +.+.. ..++++.+|.+|... +.|....... . .......+ ...++|+|..+++.
T Consensus 156 sK~a~~~~~~~~ala~e~~--~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~ 232 (267)
T 2gdz_A 156 SKHGIVGFTRSAALAANLM--NSGVRLNAICPGFVN-TAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI 232 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TCCEEEEEEEESCBS-SHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc--cCCcEEEEEecCcCc-chhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHH
Confidence 999999999974 22221 345688899887664 4442211000 0 00000001 12468999999999
Q ss_pred HHHhcC
Q psy616 460 QLLIQD 465 (1152)
Q Consensus 460 ~~l~~~ 465 (1152)
.++...
T Consensus 233 ~l~s~~ 238 (267)
T 2gdz_A 233 TLIEDD 238 (267)
T ss_dssp HHHHCT
T ss_pred HHhcCc
Confidence 888754
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-20 Score=202.93 Aligned_cols=216 Identities=12% Similarity=0.093 Sum_probs=164.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++++.|+++|+ +|++++|+.. .+++.+++ . .+.++.+|++|+++++++++ .+|+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~----~~~~ 76 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVREC---P-GIEPVCVDLGDWEATERALG----SVGP 76 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHS---T-TCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---C-CCCEEEEeCCCHHHHHHHHH----HcCC
Confidence 478999999999999999999999998 4666666642 22222222 1 34567999999999888776 6789
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++.. ..+.||++||.++..+.++...|+++|
T Consensus 77 id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~Y~~sK 153 (244)
T 3d3w_A 77 VDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG--VPGAIVNVSSQCSQRAVTNHSVYCSTK 153 (244)
T ss_dssp CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCccCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCcEEEEeCchhhccCCCCCchHHHHH
Confidence 999999999877 67788999999999999999999999999999986532 146799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.|++.++.+.. ..++++.+|.+|.... .|.... ............ ....++++..+++..++...
T Consensus 154 ~a~~~~~~~la~e~~--~~~i~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 3d3w_A 154 GALDMLTKVMALELG--PHKIRVNAVNPTVVMT-SMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBTT-TTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhc--ccCeEEEEEEeccccc-cchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999998877632 2356888898876643 332110 111011111111 23578999999999888643
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.7e-21 Score=210.99 Aligned_cols=216 Identities=13% Similarity=0.116 Sum_probs=145.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+||||+++|+.|++ |+ +|++++|+... .+++.+ ..++.++.+|+++... .+.+.+..+++|++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~---~~~~~~-~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~i 76 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEH---LAALAE-IEGVEPIESDIVKEVL-EEGGVDKLKNLDHV 76 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHH---HHHHHT-STTEEEEECCHHHHHH-TSSSCGGGTTCSCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHH---HHHHHh-hcCCcceecccchHHH-HHHHHHHHHhcCCC
Confidence 478999999999999999999987 66 56666776432 223333 3458899999999877 55556666788999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ...+.+.+.++|++++++|+.|++++.++++|.|++.. +.||++||.++..+.+++..|+++|+
T Consensus 77 d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----g~iv~isS~~~~~~~~~~~~Y~asK~ 151 (245)
T 3e9n_A 77 DTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS----GCVIYINSGAGNGPHPGNTIYAASKH 151 (245)
T ss_dssp SEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEEC----------CHHHHHHHH
T ss_pred CEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC----CeEEEEcCcccccCCCCchHHHHHHH
Confidence 99999999987 77888999999999999999999999999999986532 67999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCce
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
+++.|++.++.+.. ..++++.+|.+|... +.|.......... .......++++|..+.+..++..+..
T Consensus 152 a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~--~~~~~~~~~p~dvA~~i~~l~~~~~~ 219 (245)
T 3e9n_A 152 ALRGLADAFRKEEA--NNGIRVSTVSPGPTN-TPMLQGLMDSQGT--NFRPEIYIEPKEIANAIRFVIDAGET 219 (245)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECCC-------------------CCGGGSCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHhh--hcCeEEEEEecCCcc-Cchhhhhhhhhhc--ccccccCCCHHHHHHHHHHHHcCCCc
Confidence 99999999887643 335688889887764 3443221111100 11122358999999999999977644
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=207.77 Aligned_cols=206 Identities=12% Similarity=0.013 Sum_probs=164.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
-++++|||||+||||+++|+.|+++|++ |++++|+.... ....+.+|++|.++++++++++.+++|++
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~-----------~~~~~~~d~~d~~~v~~~~~~~~~~~g~i 88 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWN-TISIDFRENPN-----------ADHSFTIKDSGEEEIKSVIEKINSKSIKV 88 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCTT-----------SSEEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCcccc-----------cccceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999985 66666664321 11357899999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+......+.+.+.++|++++++|+.|++++.+++.|.|++ .+.||++||+++..+.++...|+++|+
T Consensus 89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~Y~~sKa 163 (251)
T 3orf_A 89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-----GGLFVLTGASAALNRTSGMIAYGATKA 163 (251)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-----CCEEEEEechhhccCCCCCchhHHHHH
Confidence 999999998762233678889999999999999999999999998632 368999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|++.++.+......++++.+|.+|... +.|....... .......++++..+.+..++..
T Consensus 164 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~-t~~~~~~~~~------~~~~~~~~~~dva~~i~~l~~~ 226 (251)
T 3orf_A 164 ATHHIIKDLASENGGLPAGSTSLGILPVTLD-TPTNRKYMSD------ANFDDWTPLSEVAEKLFEWSTN 226 (251)
T ss_dssp HHHHHHHHHTSTTSSSCTTCEEEEEEESCBC-CHHHHHHCTT------SCGGGSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcccCCCcEEEEEecCcCc-Ccchhhhccc------ccccccCCHHHHHHHHHHHhcC
Confidence 9999999998773111346788899887654 3442111000 0112357899999999999877
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.3e-21 Score=214.27 Aligned_cols=222 Identities=14% Similarity=0.089 Sum_probs=161.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||+||||+++|+.|+++|+ +|++++|+... ..+..+..+.++.++.+|++|.++++++++++ +++
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~----~~i 87 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRK--GEAAARTMAGQVEVRELDLQDLSSVRRFADGV----SGA 87 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHH--HHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC----CCE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHH--HHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc----CCC
Confidence 589999999999999999999999997 56666776422 22223344778999999999999999888765 799
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----------- 383 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~----------- 383 (1152)
|+||||||+.. +..+.+.++|++++++|+.|++++.++++|.|+ ..||++||.++..+.
T Consensus 88 D~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-------~riv~isS~~~~~~~~~~~~~~~~~~ 157 (291)
T 3rd5_A 88 DVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLT-------DRVVTVSSMAHWPGRINLEDLNWRSR 157 (291)
T ss_dssp EEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE-------EEEEEECCGGGTTCCCCSSCTTCSSS
T ss_pred CEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hheeEeechhhccCCCCccccccccc
Confidence 99999999865 235678899999999999999999999988753 269999999988763
Q ss_pred --CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhh--cCCCCCCHHHHHHHHH
Q psy616 384 --FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS--SKQKVLHENDGLKLFE 459 (1152)
Q Consensus 384 --~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~--~g~~~l~~~e~~~~l~ 459 (1152)
++...|+++|+++..|++.++.+....+.++++.+|++|... +.|...........+.. .+....+++++.+.+.
T Consensus 158 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 236 (291)
T 3rd5_A 158 RYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSH-TNLQGASGRKLGDALMSAATRVVATDADFGARQTL 236 (291)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGG-SCC--------------------CHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCc-cccccccchHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 456789999999999999988775433445799999988774 55543321111111111 1111235899999998
Q ss_pred HHHhcC--ceeeeeech
Q psy616 460 QLLIQD--KIQYLVLSG 474 (1152)
Q Consensus 460 ~~l~~~--~~~~~v~~~ 474 (1152)
.++..+ ..+++..++
T Consensus 237 ~l~~~~~~~G~~~~vdg 253 (291)
T 3rd5_A 237 YAASQDLPGDSFVGPRF 253 (291)
T ss_dssp HHHHSCCCTTCEEEETT
T ss_pred HHHcCCCCCCceeCCcc
Confidence 888764 224444444
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=223.96 Aligned_cols=187 Identities=15% Similarity=0.097 Sum_probs=149.4
Q ss_pred CCCEEEEECCch--hHHHHHHHHHHHcCCcEEEEecCCc---chHHHHH-------HHHhCC---CcEEEEEecCCCH--
Q psy616 235 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSK---LNSIIYK-------KLKKFN---NKAIYIQVDVSDK-- 297 (1152)
Q Consensus 235 ~~~~~LITGg~g--GIG~~lA~~La~~Ga~~vil~~R~~---~~~~~~~-------~l~~~g---~~v~~~~~Dvsd~-- 297 (1152)
.+|++||||+++ |||+++|+.|+++|++ |++..|++ ......+ .+...+ ..+.+++||+++.
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~-Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 79 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA 79 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCE-EEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccch
Confidence 368999999875 9999999999999985 55444433 1111111 111112 3478899999988
Q ss_pred H------------------HHHHHHHHHHhhcCCeeEEEEcccccC-cCcccccCCHHHHHHHHhhhchHHHHHHHHHHH
Q psy616 298 L------------------KMISEINSIINNIGPIDGVLHIAGISG-LTSNILEANYKNFYSVLSSKISGTIALNYALEN 358 (1152)
Q Consensus 298 ~------------------~v~~~~~~~~~~~G~idgvIh~AG~~~-~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p 358 (1152)
+ +++++++++.+++|+||+||||||+.. ...++.+.+.++|++++++|+.|++++.++++|
T Consensus 80 ~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p 159 (329)
T 3lt0_A 80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred hhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 8 999999999999999999999999742 256889999999999999999999999999999
Q ss_pred HHHHhcCCCCCEEEEecCCccccCCCCCh-hhhHHHHHHHHHHHHHHhcccccC-CCceEEEEeCCcccCcccc
Q psy616 359 TILKLQKNKLDFVCYFSSSSAILGDFGSC-DYAMGNRFQTVYAKYLNNKNIYKK-YTNKLITINWPLWNNSKFK 430 (1152)
Q Consensus 359 ~m~~~~~~~~~~iV~~SS~a~~~g~~g~~-~Yaaana~l~~la~~~~~~g~~~~-~~~~~~si~wg~w~~~Gm~ 430 (1152)
+|++ . +.||++||+++..+.+++. .|+++|+++.+|++.++.+.. . .++++.+|.+|... +.|.
T Consensus 160 ~m~~---~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~--~~~gI~vn~v~PG~v~-T~~~ 225 (329)
T 3lt0_A 160 IMKP---Q--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG--RNYNIRINTISAGPLK-SRAA 225 (329)
T ss_dssp GEEE---E--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH--HHHCCEEEEEEECCCC-CHHH
T ss_pred HHhh---C--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhC--CccCeEEEEEecceee-chhH
Confidence 8643 1 7899999999999999996 999999999999999887653 2 35688888887664 5553
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-20 Score=204.05 Aligned_cols=223 Identities=16% Similarity=0.192 Sum_probs=167.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++++|||||+||||++++++|+++|+. |+++.|+... .++.++.+|++|+++++++++++ ++++++|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d 68 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYR-VVVLDLRREG-----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLF 68 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEESSCCS-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEccCccc-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence 579999999999999999999999975 5555665421 23478999999999999999999 8899999
Q ss_pred EEEEcccccCcCcccccCC----HHHHHHHHhhhchHHHHHHHHHHHHHHHhc---CCCCCEEEEecCCccccCCCCChh
Q psy616 316 GVLHIAGISGLTSNILEAN----YKNFYSVLSSKISGTIALNYALENTILKLQ---KNKLDFVCYFSSSSAILGDFGSCD 388 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~----~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~---~~~~~~iV~~SS~a~~~g~~g~~~ 388 (1152)
+||||||+.. ...+.+.+ .++|++++++|+.|++++.+++.|.|++.. ....++||++||.++..+.++...
T Consensus 69 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 147 (242)
T 1uay_A 69 AVVSAAGVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 147 (242)
T ss_dssp EEEECCCCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred EEEEcccccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence 9999999876 45555544 459999999999999999999999975432 112348999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcC--CCCCCHHHHHHHHHHHHhcC
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSK--QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g--~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|+++|++++.|++.++.+.. ..++++.+|.+|.... .|....... ......... ....++++..+.+..++...
T Consensus 148 Y~~sK~a~~~~~~~l~~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 224 (242)
T 1uay_A 148 YAASKGGVVALTLPAARELA--GWGIRVVTVAPGLFDT-PLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENP 224 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSCSS-HHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHHHHHHHHHHHh--hcCcEEEEEEeccCcc-hhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcCC
Confidence 99999999999998877643 2356888998887643 333221111 111111111 13468999999999888753
Q ss_pred --ceeeeeechh
Q psy616 466 --KIQYLVLSGE 475 (1152)
Q Consensus 466 --~~~~~v~~~~ 475 (1152)
..+.+.+++.
T Consensus 225 ~~~G~~~~v~gG 236 (242)
T 1uay_A 225 MLNGEVVRLDGA 236 (242)
T ss_dssp TCCSCEEEESTT
T ss_pred CCCCcEEEEcCC
Confidence 2244444443
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-21 Score=236.34 Aligned_cols=224 Identities=16% Similarity=0.172 Sum_probs=165.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEec---------CCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSG---------RSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEIN 305 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~---------R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~ 305 (1152)
.++++|||||++|||+++|+.|+++|++++++.. +....+...++++..+..+ .+|++|.++++++++
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~~~~~~ 94 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVIDGAKVIE 94 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGGHHHHHC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHHHHHHHH
Confidence 6899999999999999999999999985555432 2234466677787777654 389999999999999
Q ss_pred HHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC
Q psy616 306 SIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG 385 (1152)
Q Consensus 306 ~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g 385 (1152)
++.++||+||+||||||+.. ...+.+++.++|++++++|+.|++++.++++|+|++. ..++||++||+++..+.++
T Consensus 95 ~~~~~~g~iDiLVnnAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~---~~g~IV~isS~a~~~~~~~ 170 (613)
T 3oml_A 95 TAIKAFGRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ---NYGRIIMTSSNSGIYGNFG 170 (613)
T ss_dssp ----------CEECCCCCCC-CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TCEEEEEECCHHHHHCCTT
T ss_pred HHHHHCCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEECCHHHcCCCCC
Confidence 99999999999999999987 7889999999999999999999999999999998643 4578999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++.|+++|+++.+|++.++.+.. ..++++.+|.+|.. +.|...... .. .. ..++|++...++..++...
T Consensus 171 ~~~Y~asKaal~~lt~~la~e~~--~~gI~vn~v~Pg~~--t~~~~~~~~--~~-~~----~~~~pedvA~~v~~L~s~~ 239 (613)
T 3oml_A 171 QVNYTAAKMGLIGLANTVAIEGA--RNNVLCNVIVPTAA--SRMTEGILP--DI-LF----NELKPKLIAPVVAYLCHES 239 (613)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEEC--------CCCCC--HH-HH----TTCCGGGTHHHHHHTTSTT
T ss_pred ChHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEEECCCC--Chhhhhccc--hh-hh----hcCCHHHHHHHHHHhcCCC
Confidence 99999999999999999988764 34568888888753 334322111 11 11 2368999999888776543
Q ss_pred ---ceeeeeechhh
Q psy616 466 ---KIQYLVLSGEL 476 (1152)
Q Consensus 466 ---~~~~~v~~~~~ 476 (1152)
..+++.+++.+
T Consensus 240 ~~~tG~~i~vdGG~ 253 (613)
T 3oml_A 240 CEDNGSYIESAAGW 253 (613)
T ss_dssp CCCCSCEEEEETTE
T ss_pred cCCCceEEEECCCe
Confidence 23555555554
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-20 Score=201.41 Aligned_cols=216 Identities=15% Similarity=0.072 Sum_probs=163.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||++++++|+++|+. |++++|+.. .++..+ .. ..+.++.+|++|.++++++++ .+|+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~----~~~~ 76 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAK-VVAVTRTNSDLVSLAK---EC-PGIEPVCVDLGDWDATEKALG----GIGP 76 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHH---HS-TTCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHH---hc-cCCCcEEecCCCHHHHHHHHH----HcCC
Confidence 4789999999999999999999999984 666666642 222222 11 234567999999999888776 6789
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|++.. ..+.||++||.++..+.++...|+++|
T Consensus 77 id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~Y~~sK 153 (244)
T 1cyd_A 77 VDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG--VPGSIVNVSSMVAHVTFPNLITYSSTK 153 (244)
T ss_dssp CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC--CCeEEEEEcchhhcCCCCCcchhHHHH
Confidence 999999999887 67788999999999999999999999999999986532 146799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcC-CCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSK-QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g-~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++++.|++.++.+.. ..++++.+|.+|.... .|.... ........+... ...+.+++..+.+..++..+
T Consensus 154 ~a~~~~~~~~a~~~~--~~gi~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 1cyd_A 154 GAMTMLTKAMAMELG--PHKIRVNSVNPTVVLT-DMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECCBTT-HHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEecCcccC-ccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCch
Confidence 999999998876632 2346888888876643 332110 011011112112 24578999999999888643
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-20 Score=202.82 Aligned_cols=220 Identities=12% Similarity=0.048 Sum_probs=164.6
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
-+++++|||||+||||+++|+.|+++|+ +|++++|+. +. ++..+ ++.++ +|+ .++++++++++ .+
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~---~~---~~~~~-~~~~~-~D~--~~~~~~~~~~~----~~ 81 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNE---EL---LKRSG-HRYVV-CDL--RKDLDLLFEKV----KE 81 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCH---HH---HHHTC-SEEEE-CCT--TTCHHHHHHHS----CC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCH---HH---HHhhC-CeEEE-eeH--HHHHHHHHHHh----cC
Confidence 4689999999999999999999999998 566667764 22 22234 57777 999 45667666655 38
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.++|.|++. ..++||++||.++..+.++...|+++|
T Consensus 82 iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~Y~~sK 157 (249)
T 1o5i_A 82 VDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK---GWGRIVAITSFSVISPIENLYTSNSAR 157 (249)
T ss_dssp CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCcEEEEEcchHhcCCCCCCchHHHHH
Confidence 999999999877 6788899999999999999999999999999998754 346899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-ch-hHHhhcC-CCCCCHHHHHHHHHHHHhcCc----
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TD-FYFKSSK-QKVLHENDGLKLFEQLLIQDK---- 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~-~~~~~~g-~~~l~~~e~~~~l~~~l~~~~---- 466 (1152)
+++..|++.++.+.. ..++++.+|.+|.... .|....... .. ....... .+..++++..+.+..++....
T Consensus 158 ~a~~~~~~~la~e~~--~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~t 234 (249)
T 1o5i_A 158 MALTGFLKTLSFEVA--PYGITVNCVAPGWTET-ERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLT 234 (249)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBCC-TTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhh--hcCeEEEEEeeCCCcc-CcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCC
Confidence 999999999887643 3356888898876653 332111111 01 1111111 134689999999988876432
Q ss_pred eeeeeechh
Q psy616 467 IQYLVLSGE 475 (1152)
Q Consensus 467 ~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 235 G~~~~vdgG 243 (249)
T 1o5i_A 235 GQTIVVDGG 243 (249)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 344555443
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-20 Score=201.21 Aligned_cols=207 Identities=14% Similarity=0.088 Sum_probs=161.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||++|||+++|+.|+++|+ +|++.+|+.. +|++|++++++++++ +|++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------------~D~~~~~~v~~~~~~----~g~i 60 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------------LDISDEKSVYHYFET----IGAF 60 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------------CCTTCHHHHHHHHHH----HCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------------cCCCCHHHHHHHHHH----hCCC
Confidence 478999999999999999999999987 5666666542 899999999988875 4899
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.....++.+.+.++|++++++|+.|++++.+++.|+|++ .+.||++||+++..+.++...|+++|+
T Consensus 61 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~~~~Y~asK~ 135 (223)
T 3uce_A 61 DHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-----GGSITLTSGMLSRKVVANTYVKAAINA 135 (223)
T ss_dssp EEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-----EEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC-----CeEEEEecchhhccCCCCchHHHHHHH
Confidence 999999998733678899999999999999999999999999988632 367999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-----hhHHhhcCC-CCCCHHHHHHHHHHHHhcCc--
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-----DFYFKSSKQ-KVLHENDGLKLFEQLLIQDK-- 466 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-----~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~-- 466 (1152)
++.+|++.++.+.. . +++.+|.+|... +.|........ ........+ +..+|+|..+++..++....
T Consensus 136 a~~~~~~~la~e~~--~--i~vn~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~t 210 (223)
T 3uce_A 136 AIEATTKVLAKELA--P--IRVNAISPGLTK-TEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSYMT 210 (223)
T ss_dssp HHHHHHHHHHHHHT--T--SEEEEEEECSBC-SGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHHhhc--C--cEEEEEEeCCCc-chhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccCCCCC
Confidence 99999999988753 1 788889887664 44433221111 011111122 34689999999888886432
Q ss_pred eeeeeechh
Q psy616 467 IQYLVLSGE 475 (1152)
Q Consensus 467 ~~~~v~~~~ 475 (1152)
.+.+.+++.
T Consensus 211 G~~i~vdgG 219 (223)
T 3uce_A 211 GTVIDVDGG 219 (223)
T ss_dssp SCEEEESTT
T ss_pred CcEEEecCC
Confidence 345555443
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=207.86 Aligned_cols=209 Identities=15% Similarity=0.081 Sum_probs=164.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHH-cCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLIN-KYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~-~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++|||||+||||+++|++|++ +|+ +|++++|+ +..++..++++..+.++.++.+|++|.++++++++++.+++|
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 578999999999999999999999 887 56666666 344556677777778899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCC-HHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC--C------
Q psy616 313 PIDGVLHIAGISGLTSNILEAN-YKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--D------ 383 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~-~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g--~------ 383 (1152)
++|+||||||+.. ... ...+ .++|+.++++|+.|++++.+++.|.|++ .++||++||.++..+ .
T Consensus 82 ~id~li~~Ag~~~-~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~~~~~~~ 154 (276)
T 1wma_A 82 GLDVLVNNAGIAF-KVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-----QGRVVNVSSIMSVRALKSCSPELQ 154 (276)
T ss_dssp SEEEEEECCCCCC-CTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEECCHHHHHHHHTSCHHHH
T ss_pred CCCEEEECCcccc-cCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-----CCEEEEECChhhhcccccCChhHH
Confidence 9999999999875 333 3444 5899999999999999999999887531 358999999887643 0
Q ss_pred ---------------------------------CCChhhhHHHHHHHHHHHHHHhccccc--CCCceEEEEeCCcccCcc
Q psy616 384 ---------------------------------FGSCDYAMGNRFQTVYAKYLNNKNIYK--KYTNKLITINWPLWNNSK 428 (1152)
Q Consensus 384 ---------------------------------~g~~~Yaaana~l~~la~~~~~~g~~~--~~~~~~~si~wg~w~~~G 428 (1152)
.....|+++|++++.|++.++.+.... ..++++.+|.+|... +.
T Consensus 155 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~-t~ 233 (276)
T 1wma_A 155 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR-TD 233 (276)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC-ST
T ss_pred hhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccc-cC
Confidence 123789999999999999887653210 035688999887654 44
Q ss_pred ccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 429 FKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 429 m~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|... ....+++++.+.+..++..+
T Consensus 234 ~~~~-------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 234 MAGP-------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp TTCT-------------TCSBCHHHHTHHHHHHHSCC
T ss_pred cCCc-------------cccCChhHhhhhHhhhhcCc
Confidence 4321 23589999999999888644
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.9e-20 Score=194.19 Aligned_cols=200 Identities=19% Similarity=0.246 Sum_probs=155.8
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||+||||++++++|+++ +|++++|++. .++..+++. . .++.+|++|++++++++++ +|++|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~----~~~id 68 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVG---A--RALPADLADELEAKALLEE----AGPLD 68 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHT---C--EECCCCTTSHHHHHHHHHH----HCSEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh----cCCCC
Confidence 57999999999999999999988 7888888743 223333332 2 7889999999999999887 78999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
+||||||+.. ..++.+.+.++|++++++|+.|++++.+++ ...+.++||++||..+..+.++...|+++|++
T Consensus 69 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 140 (207)
T 2yut_A 69 LLVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVLKHA-------RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGA 140 (207)
T ss_dssp EEEECCCCCC-CBCSCC---CHHHHHHHHHHHHHHHHHHHC-------CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHH
T ss_pred EEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHH-------HhcCCcEEEEEcChhhccCCCCcchHHHHHHH
Confidence 9999999877 677888899999999999999999999985 23345789999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCce
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKI 467 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~ 467 (1152)
++.|++.++.+.. ..++++.+|.+|.+... |..... ..-...+.+++..+.+..++..+..
T Consensus 141 ~~~~~~~~~~~~~--~~gi~v~~v~pg~v~t~-~~~~~~--------~~~~~~~~~~dva~~~~~~~~~~~~ 201 (207)
T 2yut_A 141 LEAYLEAARKELL--REGVHLVLVRLPAVATG-LWAPLG--------GPPKGALSPEEAARKVLEGLFREPV 201 (207)
T ss_dssp HHHHHHHHHHHHH--TTTCEEEEECCCCBCSG-GGGGGT--------SCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred HHHHHHHHHHHHh--hhCCEEEEEecCcccCC-CccccC--------CCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 9999998877632 33568999999887543 311100 0113468999999999998876543
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.5e-19 Score=206.98 Aligned_cols=188 Identities=13% Similarity=-0.049 Sum_probs=150.8
Q ss_pred ccCCCEEEEECCchhHHHH--HHHHHHHcCCcEEEEecCC-cc------------hHHHHHHHHhCCCcEEEEEecCCCH
Q psy616 233 IKQGGTYLITGGTGRLGML--FSDYLINKYSTNLILSGRS-KL------------NSIIYKKLKKFNNKAIYIQVDVSDK 297 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~--lA~~La~~Ga~~vil~~R~-~~------------~~~~~~~l~~~g~~v~~~~~Dvsd~ 297 (1152)
+..+|++|||||++|||++ +|+.|+++|+++ ++++|+ .. .+...+.++..|.++.+++||++|+
T Consensus 57 ~~~gK~aLVTGassGIG~A~aia~ala~~Ga~V-i~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~ 135 (418)
T 4eue_A 57 FRGPKKVLIVGASSGFGLATRISVAFGGPEAHT-IGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSN 135 (418)
T ss_dssp CCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEE-EEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEE-EEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCH
Confidence 3578999999999999999 999999999854 444553 22 2344455667788999999999999
Q ss_pred HHHHHHHHHHHhhcCCeeEEEEcccccC------------cCccc---------------------ccCCHHHHHHHHhh
Q psy616 298 LKMISEINSIINNIGPIDGVLHIAGISG------------LTSNI---------------------LEANYKNFYSVLSS 344 (1152)
Q Consensus 298 ~~v~~~~~~~~~~~G~idgvIh~AG~~~------------~~~~~---------------------~~~~~e~~~~~~~~ 344 (1152)
++++++++++.+++|+||+||||||+.. ..+++ .+.+.++|++++++
T Consensus 136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v 215 (418)
T 4eue_A 136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV 215 (418)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence 9999999999999999999999999741 01233 46799999999999
Q ss_pred hchHHH-HHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC--hhhhHHHHHHHHHHHHHHhcccccC-CCceEEEEe
Q psy616 345 KISGTI-ALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--CDYAMGNRFQTVYAKYLNNKNIYKK-YTNKLITIN 420 (1152)
Q Consensus 345 kv~g~~-~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~--~~Yaaana~l~~la~~~~~~g~~~~-~~~~~~si~ 420 (1152)
+..+.| .+.+.+.+.+. . .+.+.||++||+++..+.+++ +.|+++|++|.+|++.++.+.. . .++++.+|.
T Consensus 216 n~~~~~~~~~~~l~~~~~--~-~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa--~~~GIrVN~V~ 290 (418)
T 4eue_A 216 MGGEDWQEWCEELLYEDC--F-SDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLN--RVIGGRAFVSV 290 (418)
T ss_dssp HSSHHHHHHHHHHHHTTC--E-EEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH--HHHSCEEEEEE
T ss_pred hhHHHHHHHHHHHHHHhh--h-cCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC--CccCeEEEEEE
Confidence 999988 66666554321 1 134689999999999998888 9999999999999999988754 3 457888999
Q ss_pred CCcccC
Q psy616 421 WPLWNN 426 (1152)
Q Consensus 421 wg~w~~ 426 (1152)
+|....
T Consensus 291 PG~v~T 296 (418)
T 4eue_A 291 NKALVT 296 (418)
T ss_dssp CCCCCC
T ss_pred CCcCcC
Confidence 887753
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=208.38 Aligned_cols=260 Identities=15% Similarity=0.079 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaC 795 (1152)
...|+.+++++||++||+++++++ .|++|+...++.. ...+.+++..||++ +|++.|+++|
T Consensus 68 ~~~La~~Aa~~al~~ag~~~~~Id----~vi~~t~~~~~~~-------------p~~a~~v~~~lGl~~~~~~~~v~~aC 130 (345)
T 3s21_A 68 ASDAATQAARKALIDANIGIEKIG----LLINTSVSRDYLE-------------PSTASIVSGNLGVSDHCMTFDVANAC 130 (345)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEECCSCCSCSS-------------SCHHHHHHHHHTCCTTCEEEECCCGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCCC-------------ChHHHHHHHHhCCCCCceEEeECCcC
Confidence 467899999999999999998887 6888875533211 13578899999996 7999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhc
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 875 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~ 875 (1152)
+|++.||+.|++.|++|+++.+||+|++.+... ..+...+++++++.|++||...+|+++|||++++||++.+.. .
T Consensus 131 ~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~---~~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~-~ 206 (345)
T 3s21_A 131 LAFINGMDIAARMLERGEIDYALVVDGETANLV---YEKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELV-P 206 (345)
T ss_dssp GHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHH---HHHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGS-T
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEcccchh---hccccccccCCccchhhhhhhccceeeccceeEEEEecCCCC-C
Confidence 999999999999999999999999999985433 223334567788899999999999999999999999986542 1
Q ss_pred CCCceEEEEEEEEEecCCCCCCCCCCC---------------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHH
Q psy616 876 DGDPIHAIIRGSGINYDGKTNGITAPN---------------GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPV 940 (1152)
Q Consensus 876 dgd~i~avI~g~a~~~dG~~~~~~~P~---------------~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~ 940 (1152)
.+.+ |.++....++....+..+. .....++++++|+++|++++||+|+..|-.+...
T Consensus 207 ~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i---- 278 (345)
T 3s21_A 207 DAPR----YKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPH---- 278 (345)
T ss_dssp TSCE----EEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHH----
T ss_pred CCcc----eeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH----
Confidence 2333 4455555554332222111 1234577899999999999999999999887764
Q ss_pred HHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeecccccc
Q psy616 941 EINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKK 1020 (1152)
Q Consensus 941 E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~ 1020 (1152)
++++.+.++-...+ +. .+-..+||+.+|+-...|..++ +.|.+.|
T Consensus 279 -~~~~~~~lgl~~ek---~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~~~-------------------------- 323 (345)
T 3s21_A 279 -TAAFVKSFGIDPAK---VM--TIFGEHGNIGPASVPIVLSKLK---ELGRLKK-------------------------- 323 (345)
T ss_dssp -HHHHHHHHTCCGGG---BC--CCHHHHCBCGGGHHHHHHHHHH---HHTCCCT--------------------------
T ss_pred -HHHHHHHcCcCHHH---ce--eeHhhcCchHHHHHHHHHHHHH---HcCCCCC--------------------------
Confidence 34555555532211 11 2234689999998777775543 3333211
Q ss_pred ccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1021 WNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1021 w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+ ...++.+||.|-+-..++|+
T Consensus 324 -----G--d~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 324 -----G--DRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp -----T--CEEEEEEEETTTEEEEEEEE
T ss_pred -----C--CEEEEEEEChhhhheEEEEE
Confidence 1 24578899999888888875
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.7e-19 Score=198.76 Aligned_cols=232 Identities=12% Similarity=0.064 Sum_probs=164.6
Q ss_pred CCCEEEEECCc--hhHHHHHHHHHHHcCCcEEEEecCCcch------------HHHHHHHHhCCC---cEEEEEec----
Q psy616 235 QGGTYLITGGT--GRLGMLFSDYLINKYSTNLILSGRSKLN------------SIIYKKLKKFNN---KAIYIQVD---- 293 (1152)
Q Consensus 235 ~~~~~LITGg~--gGIG~~lA~~La~~Ga~~vil~~R~~~~------------~~~~~~l~~~g~---~v~~~~~D---- 293 (1152)
.++++|||||+ +|||+++|+.|+++|++ |++++|++.. ++. +++.. +. ....+.+|
T Consensus 7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 83 (297)
T 1d7o_A 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAE-ILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECTTCC
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCe-EEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccceecc
Confidence 57899999999 99999999999999985 5555543210 111 11111 11 13444443
Q ss_pred ----CC----C--------HHHHHHHHHHHHhhcCCeeEEEEcccccC-cCcccccCCHHHHHHHHhhhchHHHHHHHHH
Q psy616 294 ----VS----D--------KLKMISEINSIINNIGPIDGVLHIAGISG-LTSNILEANYKNFYSVLSSKISGTIALNYAL 356 (1152)
Q Consensus 294 ----vs----d--------~~~v~~~~~~~~~~~G~idgvIh~AG~~~-~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~ 356 (1152)
++ | +++++++++++.+++|+||+||||||+.. ...++.+.+.++|++++++|+.|++++.+++
T Consensus 84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 163 (297)
T 1d7o_A 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence 32 2 56899999999999999999999999742 1457789999999999999999999999999
Q ss_pred HHHHHHhcCCCCCEEEEecCCccccCCCCC-hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-
Q psy616 357 ENTILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN- 434 (1152)
Q Consensus 357 ~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~-~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~- 434 (1152)
+|+|++ .+.||++||+++..+.+++ ..|+++|+++++|++.++.+..+ ..++++.+|.+|... +.|.....
T Consensus 164 ~~~m~~-----~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~-~~gi~vn~v~PG~v~-T~~~~~~~~ 236 (297)
T 1d7o_A 164 LPIMNP-----GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGR-KQNIRVNTISAGPLG-SRAAKAIGF 236 (297)
T ss_dssp GGGEEE-----EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCCB-CCCSSCCSH
T ss_pred HHHhcc-----CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCc-ccCcEEEEEeccccc-cchhhhccc
Confidence 998632 2689999999999999998 69999999999999998776321 125688889888664 44433211
Q ss_pred -cc-chhHHhhcCC-CCCCHHHHHHHHHHHHhcC----ceeeeeechhh
Q psy616 435 -EQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 435 -~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~~~~~v~~~~~ 476 (1152)
.. .........+ +..+|+|..+.+..++... ..+.+.+++.+
T Consensus 237 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 237 IDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 00 0111112222 3468999999998877532 23556666654
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.1e-19 Score=201.48 Aligned_cols=234 Identities=16% Similarity=0.090 Sum_probs=166.3
Q ss_pred CCCEEEEECC--chhHHHHHHHHHHHcCCcEEEEecCCcch--------HHHHHHHHhC--CCc---EEEEEec------
Q psy616 235 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSKLN--------SIIYKKLKKF--NNK---AIYIQVD------ 293 (1152)
Q Consensus 235 ~~~~~LITGg--~gGIG~~lA~~La~~Ga~~vil~~R~~~~--------~~~~~~l~~~--g~~---v~~~~~D------ 293 (1152)
.++++||||| ++|||+++|+.|+++|++ |++++|++.. ....++++.. +.. +.++.+|
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLASAGAR-VALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP 86 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHTTTCE-EEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHHCCCE-EEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence 5799999999 899999999999999985 5555554210 0011112221 211 2334443
Q ss_pred ------CCC--------HHHHHHHHHHHHhhcCCeeEEEEcccccC-cCcccccCCHHHHHHHHhhhchHHHHHHHHHHH
Q psy616 294 ------VSD--------KLKMISEINSIINNIGPIDGVLHIAGISG-LTSNILEANYKNFYSVLSSKISGTIALNYALEN 358 (1152)
Q Consensus 294 ------vsd--------~~~v~~~~~~~~~~~G~idgvIh~AG~~~-~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p 358 (1152)
++| +++++++++++.++||+||+||||||+.. ...++.+.+.++|++++++|+.|++++.++++|
T Consensus 87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 166 (315)
T 2o2s_A 87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP 166 (315)
T ss_dssp TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 333 66899999999999999999999999763 146788999999999999999999999999999
Q ss_pred HHHHhcCCCCCEEEEecCCccccCCCCC-hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc--
Q psy616 359 TILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-- 435 (1152)
Q Consensus 359 ~m~~~~~~~~~~iV~~SS~a~~~g~~g~-~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-- 435 (1152)
+|++ .+.||++||+++..+.+++ +.|+++|+++.+|++.++.+..+ ..++++.+|.+|... +.|......
T Consensus 167 ~m~~-----~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~-~~gIrvn~v~PG~v~-T~~~~~~~~~~ 239 (315)
T 2o2s_A 167 IMNE-----GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQ-KYGVRVNAISAGPLK-SRAASAIGKSG 239 (315)
T ss_dssp TEEE-----EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEECCCC-CHHHHHTTCSS
T ss_pred HHhc-----CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCc-ccCeEEEEEeccccc-chhhhhccccc
Confidence 8632 2689999999999999998 59999999999999998876321 135788899888664 444221110
Q ss_pred ---cchh----HHhhcCC-CCCCHHHHHHHHHHHHhcC----ceeeeeechhh
Q psy616 436 ---QTDF----YFKSSKQ-KVLHENDGLKLFEQLLIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 436 ---~~~~----~~~~~g~-~~l~~~e~~~~l~~~l~~~----~~~~~v~~~~~ 476 (1152)
.... ......+ +..+|+|..+.+..++... ..+.+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 240 EKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292 (315)
T ss_dssp SSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence 0000 0111122 3568999999998877532 23566666665
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-19 Score=202.58 Aligned_cols=294 Identities=17% Similarity=0.187 Sum_probs=200.1
Q ss_pred cEEEEeeeeccCC-CCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 632 LIAIIGMSGRFPA-ARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 632 ~IaIvGm~~~~P~-~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
+|.|+|+++.+|. ..+.++||+.|.+.. +. .+ +.|-.+.. .+..++ ...+
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~--~~-~~-~~~i~~rt---------gi~~r~-~~~~--------------- 61 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQG--IE-TS-DEWIVART---------GIHARY-FAEP--------------- 61 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CC-CC-HHHHHHHH---------CCSEEE-ECCT---------------
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhcccc--CC-CC-HHHhHHhc---------CceEEE-EcCC---------------
Confidence 6999999999999 578899999874411 10 11 11211000 000011 0000
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCc
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPV 788 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs 788 (1152)
-.+...|+++++++||++||+++++++ .|++|+...++. . ...+.+++..||+ ++|+
T Consensus 62 ----~~~~~~la~~Aa~~al~~ag~~~~~Id----~vi~~t~~~~~~--------~-----p~~a~~v~~~lgl~~~~~~ 120 (333)
T 4dfe_A 62 ----DVTTSDLAFIASQRAIEAADIDPQSID----LIIVATSTPDFV--------F-----PSTACLLQNKLGIRNHGAA 120 (333)
T ss_dssp ----TCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSSS--------B-----SCHHHHHHHHTTCCSCCEE
T ss_pred ----CCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC--------C-----CcHHHHHHHHhCCCCCCcE
Confidence 134678999999999999999998886 788887654432 1 1357899999999 7899
Q ss_pred ccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEc
Q psy616 789 MAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLK 868 (1152)
Q Consensus 789 ~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk 868 (1152)
+.|+++|+|++.||+.|++.|++|+++.+||+|++.+... ..|+.+..++++|||++++||+
T Consensus 121 ~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~------------------~~~~d~~~~~lfGDGA~A~vl~ 182 (333)
T 4dfe_A 121 FDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRI------------------LDFKDRTTCVLFGDGAGAVILQ 182 (333)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG------------------CCTTCTTTTTTBCEEEEEEEEE
T ss_pred EEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccccc------------------cCcccccceeeeccccEEEEEE
Confidence 9999999999999999999999999999999999984321 1133445789999999999999
Q ss_pred ccchhhcCCCceEEEEEEEEEecCCCC-CCCCCC------------------------CHHHHHHHHHHHHHHcCCCCCC
Q psy616 869 RLSRALSDGDPIHAIIRGSGINYDGKT-NGITAP------------------------NGISQTELIKSVYKKSNLNPED 923 (1152)
Q Consensus 869 ~l~~A~~dgd~i~avI~g~a~~~dG~~-~~~~~P------------------------~~~~q~~~i~~al~~Agi~p~d 923 (1152)
+.+ +..|. ++.+.+||.. ..+..| ....+.++++++|+++|++++|
T Consensus 183 ~~~-----~~~i~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~d 253 (333)
T 4dfe_A 183 ASD-----EPGVL----ASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSAEQ 253 (333)
T ss_dssp EES-----SCSEE----EEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred EcC-----CCCeE----EEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 865 22333 3444444431 111111 1256788999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCc
Q psy616 924 INYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENN 1003 (1152)
Q Consensus 924 I~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np 1003 (1152)
|+|+.+|-.+.++ ++++.+.++-... + +.. ...++||+.+|+=...|-.+ ++.+.+.|
T Consensus 254 id~~~~Hq~~~~i-----~~~~~~~lgl~~~--~-~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~~~--------- 311 (333)
T 4dfe_A 254 IDWLIPHQANIRI-----MQSTCRKLGLPQE--R-MIV--TVGEHGNTSAASIPLALDVA---VRDGRIKR--------- 311 (333)
T ss_dssp CSEEEECCSCHHH-----HHHHHHHTTCCGG--G-BCC--CHHHHCBCGGGHHHHHHHHH---HHTTCSCT---------
T ss_pred CCEEEEcCCCHHH-----HHHHHHHhCCCHH--H-hhh--hHHhcCchHHHHHHHHHHHH---HHcCCCCC---------
Confidence 9999999888764 3455555543221 1 222 34578999999866665443 33332211
Q ss_pred ccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1004 YIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1004 ~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
-.+.++.+||.|-+-..++|+
T Consensus 312 ------------------------Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 312 ------------------------GQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp ------------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred ------------------------CCEEEEEEEchhheeEEEEEE
Confidence 123567889999999988885
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-19 Score=204.62 Aligned_cols=234 Identities=13% Similarity=0.048 Sum_probs=141.7
Q ss_pred CCCEEEEECC--chhHHHHHHHHHHHcCCcEEEEecCCc------------chH-----------HHHHHHHhCCCc---
Q psy616 235 QGGTYLITGG--TGRLGMLFSDYLINKYSTNLILSGRSK------------LNS-----------IIYKKLKKFNNK--- 286 (1152)
Q Consensus 235 ~~~~~LITGg--~gGIG~~lA~~La~~Ga~~vil~~R~~------------~~~-----------~~~~~l~~~g~~--- 286 (1152)
.++++||||| ++|||+++|+.|+++|++ |++++|++ ..+ +..++++..+..
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRAAGAR-VLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF 86 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHHTTCE-EEEEECHHHHHHHHC--------------------------------CC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCE-EEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence 4789999999 899999999999999985 55554421 111 122333333321
Q ss_pred EEEEEec------------CCC--------HHHHHHHHHHHHhhcCCeeEEEEcccccC-cCcccccCCHHHHHHHHhhh
Q psy616 287 AIYIQVD------------VSD--------KLKMISEINSIINNIGPIDGVLHIAGISG-LTSNILEANYKNFYSVLSSK 345 (1152)
Q Consensus 287 v~~~~~D------------vsd--------~~~v~~~~~~~~~~~G~idgvIh~AG~~~-~~~~~~~~~~e~~~~~~~~k 345 (1152)
+.++.+| ++| +++++++++++.++||+||+||||||+.. ...++.+.+.++|++++++|
T Consensus 87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN 166 (319)
T 2ptg_A 87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS 166 (319)
T ss_dssp SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence 2334333 333 45899999999999999999999999763 14678899999999999999
Q ss_pred chHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC-hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 346 ISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS-CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 346 v~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~-~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
+.|++++.++++|+|++ .+.||++||+++..+.+++ ..|+++|+++.+|++.++.+... ..++++.+|.+|..
T Consensus 167 ~~g~~~l~~~~~~~m~~-----~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~-~~gIrvn~v~PG~v 240 (319)
T 2ptg_A 167 SYSFVSLLQHFLPLMKE-----GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGR-ARAVRVNCISAGPL 240 (319)
T ss_dssp THHHHHHHHHHGGGEEE-----EEEEEEEEECC------------------THHHHHHHHHHHHH-HHCCEEEEEEECCC
T ss_pred hHHHHHHHHHHHHHHhc-----CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcc-ccCeeEEEEeeCCc
Confidence 99999999999998632 2689999999999999998 79999999999999998876321 13568888988876
Q ss_pred cCcccccccccc-c----hh----HHhhcCC-CCCCHHHHHHHHHHHHhcC----ceeeeeechhh
Q psy616 425 NNSKFKIGNNEQ-T----DF----YFKSSKQ-KVLHENDGLKLFEQLLIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 425 ~~~Gm~~~~~~~-~----~~----~~~~~g~-~~l~~~e~~~~l~~~l~~~----~~~~~v~~~~~ 476 (1152)
. +.|....... . .. ......+ +..+|+|..+.+..++... ..+.+.+++.+
T Consensus 241 ~-T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~ 305 (319)
T 2ptg_A 241 K-SRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL 305 (319)
T ss_dssp C--------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred c-ChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence 4 4443221100 0 00 0011111 3468999999998877542 23556666554
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-19 Score=237.30 Aligned_cols=278 Identities=13% Similarity=0.090 Sum_probs=196.3
Q ss_pred CCCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC
Q psy616 705 FEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL 784 (1152)
Q Consensus 705 f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l 784 (1152)
..+..++.+.+++...++++++.+||+|||+++++++ .+++++..+ + .. ...+.+|+..||+
T Consensus 676 ~~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId----~ii~~t~~~-~--------~~-----p~~a~~v~~~lGl 737 (979)
T 3tsy_A 676 PSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKIT----HLVFCTTSG-V--------EM-----PGADYKLANLLGL 737 (979)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSC-C--------CS-----SCHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEEeeCC-C--------CC-----CcHHHHHHHHcCC
Confidence 3466777777778888999999999999999988876 577776322 1 11 2468899999999
Q ss_pred CCCc---ccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccc
Q psy616 785 KGPV---MAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEA 861 (1152)
Q Consensus 785 ~GPs---~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG 861 (1152)
+|+. +.+.+||+|++.||..|++.|++|.++.|||+|++..... -.+...++++...+++++|||
T Consensus 738 ~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~------------~~~~~~~~~~~~~~~~lfGDG 805 (979)
T 3tsy_A 738 EPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVT------------FRGPSEDALDSLVGQALFGDG 805 (979)
T ss_dssp CTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTT------------CCCCCSSCHHHHHHHHHBCCE
T ss_pred CcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchh------------eeCCCccCHHHHhhhhhccCc
Confidence 9865 9999999999999999999999999999999999973211 011122333344457899999
Q ss_pred cEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCC--------------CC--HHHHHHHHHHHHHHcCCCCCCcc
Q psy616 862 VVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITA--------------PN--GISQTELIKSVYKKSNLNPEDIN 925 (1152)
Q Consensus 862 ~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~--------------P~--~~~q~~~i~~al~~Agi~p~dI~ 925 (1152)
+|++||++.+++...+..++....+.....+.....-.. |+ .....++++++|+++|++++||+
T Consensus 806 A~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did 885 (979)
T 3tsy_A 806 SAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSL 885 (979)
T ss_dssp EEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS
T ss_pred eEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccc
Confidence 999999998887777888888888887665543211000 10 23367899999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcc
Q psy616 926 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 1004 (1152)
Q Consensus 926 yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~ 1004 (1152)
|+++|.+++++.|.+| +.++-... + +... .+-..+||+-+||=...|-.+.-.++.|-.
T Consensus 886 ~~~~Hq~~~~i~~~~~-----~~lgl~~~--k-~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~------------ 945 (979)
T 3tsy_A 886 FWIAHPGGPAILDAVE-----AKLNLDKK--K-LEATRHVLSEYGNMSSACVLFILDEMRKKSLKGER------------ 945 (979)
T ss_dssp EEEECCSCHHHHHHHH-----HHHTCCTT--T-THHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTC------------
T ss_pred eEEECCCChHHHHHHH-----HHcCCChH--H-HHHHHHHHHHcCCcchhhHHHHHHHHHhhhccccc------------
Confidence 9999999988766554 33442211 1 1111 123457999999877777655433332210
Q ss_pred cccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1005 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1005 i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+. ........+..+||.|-+-+.++|+-
T Consensus 946 v~-----------------~g~~~~~~ll~~~G~G~t~~~~~l~~ 973 (979)
T 3tsy_A 946 AT-----------------TGEGLDWGVLFGFGPGLTIETVVLHS 973 (979)
T ss_dssp SB-----------------TTTTCSEEEEEEECGGGEEEEEEEEC
T ss_pred cc-----------------CCCCcceeEEEEeCCchHHHHHHHHh
Confidence 00 01112345788999998999998873
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.1e-18 Score=178.05 Aligned_cols=188 Identities=17% Similarity=0.145 Sum_probs=151.8
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
++|||||+||||++++++|+ +|+ +|++++|+.. ++.+|++|+++++++++++ |++|+|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~----~~~d~v 62 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------------DVTVDITNIDSIKKMYEQV----GKVDAI 62 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence 79999999999999999999 887 5666666642 4789999999999988764 899999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHHH
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 397 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~ 397 (1152)
|||||... ..++.+.+.++|++.+++|+.|++++.+++.+.|+ + .++||++||..+..+.++...|+++|++++
T Consensus 63 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~ 136 (202)
T 3d7l_A 63 VSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLN---D--KGSFTLTTGIMMEDPIVQGASAAMANGAVT 136 (202)
T ss_dssp EECCCCCC-CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEE---E--EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred EECCCCCC-CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhc---c--CCEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence 99999876 67788999999999999999999999999877642 1 268999999999999999999999999999
Q ss_pred HHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 398 VYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 398 ~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
.|++.++.+. ..++++.+|.+|.... .|... .. .......+.+++..+.+..++..
T Consensus 137 ~~~~~~~~e~---~~gi~v~~v~pg~v~~-~~~~~-----~~--~~~~~~~~~~~dva~~~~~~~~~ 192 (202)
T 3d7l_A 137 AFAKSAAIEM---PRGIRINTVSPNVLEE-SWDKL-----EP--FFEGFLPVPAAKVARAFEKSVFG 192 (202)
T ss_dssp HHHHHHTTSC---STTCEEEEEEECCBGG-GHHHH-----GG--GSTTCCCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHc---cCCeEEEEEecCccCC-chhhh-----hh--hccccCCCCHHHHHHHHHHhhhc
Confidence 9999988663 2356888888776543 22110 00 01123568999999998877743
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.76 E-value=5.5e-19 Score=207.27 Aligned_cols=254 Identities=15% Similarity=0.125 Sum_probs=182.4
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCC--cccc-c
Q psy616 716 DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGP--VMAI-N 792 (1152)
Q Consensus 716 dpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GP--s~tv-d 792 (1152)
.+...++++++.+||++||+++++++ .+++|+... +. . ...+.+|+..||++++ ++.+ +
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id----~vi~~t~~~-~~--------~-----p~~a~~v~~~lGl~~~~~~~~v~~ 172 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIG----LLVLATSTG-FI--------A-----PGVDVAIVKELGLSPSISRVVVNF 172 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEE----EEEEEESSC-CC--------S-----SCHHHHHHHHHTCCTTCEEEEEES
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCC-Cc--------c-----ChHHHHHHHHcCcCCCcceeEecc
Confidence 35678999999999999999876654 566676543 11 1 1257899999999986 5777 9
Q ss_pred ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCC----CcccccccEEEEEc
Q psy616 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN----GLVPSEAVVAVVLK 868 (1152)
Q Consensus 793 taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~----G~v~gEG~~~vvLk 868 (1152)
++|+|++.||+.|++.|++|.+|.+||+|++.+... + -|+.+.+ |+++|||++++||+
T Consensus 173 ~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~-----------~-------~~~~~r~~~~~~~lfGDGA~A~vL~ 234 (393)
T 1ted_A 173 MGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVN-----------A-------VFADDINDVVIHSLFGDGCAALVIG 234 (393)
T ss_dssp CGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGG-----------C-------CCCSSHHHHHHHHHBCEEEEEEEEE
T ss_pred chhHHHHHHHHHHHHHHHcCCCCEEEEEEEEecccc-----------C-------CCCCCHHHhhhhhhhcCccEEEEEe
Confidence 999999999999999999999999999999974321 0 0444554 89999999999999
Q ss_pred ccchhhcCCCceEEEEEEEEE--ecCCCCC--------------CCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy616 869 RLSRALSDGDPIHAIIRGSGI--NYDGKTN--------------GITAP--NGISQTELIKSVYKKSNLNPEDINYIITH 930 (1152)
Q Consensus 869 ~l~~A~~dgd~i~avI~g~a~--~~dG~~~--------------~~~~P--~~~~q~~~i~~al~~Agi~p~dI~yve~h 930 (1152)
+.+++..+|. .++.|.+.+. ..||... +-..| ....+.++|+++|+++|++++||+||.+|
T Consensus 235 ~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H 313 (393)
T 1ted_A 235 ASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIH 313 (393)
T ss_dssp EECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEEC
T ss_pred cCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEEC
Confidence 8776644454 5667777644 3666421 11112 23467889999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcccCCCCCceee-eccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCC
Q psy616 931 GTGTKLGDPVEINALHDVFKNKTYNQKFCAI-TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKN 1009 (1152)
Q Consensus 931 gtgT~~gD~~E~~al~~~f~~~~~~~~~~~i-gsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~ 1009 (1152)
++++++.|.+| +.++-... + +.+ ..+...+||+.+|+-...|-.++ +.+.+.
T Consensus 314 ~~~~~i~d~~~-----~~lgl~~~--k-~~~s~~~~~~~GNt~sAsi~~~L~~~~---~~g~~~---------------- 366 (393)
T 1ted_A 314 PGGPKIIEQSV-----RSLGISAE--L-AAQSWDVLARFGNMLSVSLIFVLETMV---QQAESA---------------- 366 (393)
T ss_dssp CSCHHHHHHHH-----HHHTCCGG--G-GHHHHHHHHHHCBCTHHHHHHHHHHHH---HSCSSS----------------
T ss_pred CCcHHHHHHHH-----HHcCCCHH--H-HHHHHHHHHhhCCchHhHHHHHHHHHH---hcCccC----------------
Confidence 99999877554 33442211 1 222 24567789999888666553332 332210
Q ss_pred CCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1010 SPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1010 ~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
.+-.+.++.+||.|.+.+.++|+-
T Consensus 367 ----------------~~Gd~vll~~~G~G~t~~~~~l~~ 390 (393)
T 1ted_A 367 ----------------KAISTGVAFAFGPGVTVEGMLFDI 390 (393)
T ss_dssp ----------------SSSEEEEEEEEETTTEEEEEEEEE
T ss_pred ----------------CCCCeEEEEEeccchhhhhhheee
Confidence 011356789999999999999863
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=5.9e-18 Score=186.59 Aligned_cols=210 Identities=14% Similarity=0.059 Sum_probs=146.3
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++|||||+||||+++|+.|+++|++ |+++.|+.... +. .+.+|++|.++++++++++ +|+||+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~------~~------~~~~Dl~~~~~v~~~~~~~---~~~id~ 65 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQ-IVGIDIRDAEV------IA------DLSTAEGRKQAIADVLAKC---SKGMDG 65 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSSSE------EC------CTTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCchhh------cc------ccccCCCCHHHHHHHHHHh---CCCCCE
Confidence 58999999999999999999999985 55556653210 00 1678999999988887633 389999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc----------------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI---------------- 380 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~---------------- 380 (1152)
||||||+.. .. +.|++++++|+.|++++.++++|.|++. ..+.||++||.++.
T Consensus 66 lv~~Ag~~~-~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~~~~~~~~~ 134 (257)
T 1fjh_A 66 LVLCAGLGP-QT-------KVLGNVVSVNYFGATELMDAFLPALKKG---HQPAAVVISSVASAHLAFDKNPLALALEAG 134 (257)
T ss_dssp EEECCCCCT-TC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTS---SSCEEEEECCGGGGSSCGGGCTTHHHHHHT
T ss_pred EEECCCCCC-Cc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhc---CCcEEEEECChhhhccccccchhhhhhccc
Confidence 999999754 11 1289999999999999999999997642 35789999999988
Q ss_pred ------------cCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-ccc-chhHHh--hc
Q psy616 381 ------------LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-NEQ-TDFYFK--SS 444 (1152)
Q Consensus 381 ------------~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~~~-~~~~~~--~~ 444 (1152)
.+.++...|+++|++++.|++.++.+.. ..++++.+|.+|... +.|.... ... .....+ ..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~ 211 (257)
T 1fjh_A 135 EEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG--EAGVRLNTIAPGATE-TPLLQAGLQDPRYGESIAKFVP 211 (257)
T ss_dssp CHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH--HTTCEEEEEEECC----------------------CCC
T ss_pred chhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHh--hcCeEEEEEeeCCCC-CccchhhccchhHHHHHHhccc
Confidence 3445778999999999999998876632 235688899887664 4443221 110 011111 01
Q ss_pred C-CCCCCHHHHHHHHHHHHhcCc----eeeeeechhh
Q psy616 445 K-QKVLHENDGLKLFEQLLIQDK----IQYLVLSGEL 476 (1152)
Q Consensus 445 g-~~~l~~~e~~~~l~~~l~~~~----~~~~v~~~~~ 476 (1152)
. ....+++++++.+..++..+. .+.+.+++.+
T Consensus 212 ~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~ 248 (257)
T 1fjh_A 212 PMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248 (257)
T ss_dssp STTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred ccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence 1 135789999999988876441 3555555544
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.5e-16 Score=170.83 Aligned_cols=199 Identities=15% Similarity=0.069 Sum_probs=144.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++|||||+||||+++++.|+++|+. |+++.|+.... +. .+.+|++|.++++++++++ .+++|+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~-V~~~~r~~~~~------~~------~~~~D~~~~~~~~~~~~~~---~~~~d~ 65 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHT-VIGIDRGQADI------EA------DLSTPGGRETAVAAVLDRC---GGVLDG 65 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSSSE------EC------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCE-EEEEeCChhHc------cc------cccCCcccHHHHHHHHHHc---CCCccE
Confidence 57999999999999999999999875 55556653210 00 1678999999999888754 378999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-------------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------------- 383 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~------------- 383 (1152)
||||||... . .+.|+..+++|+.|++++.+++.+.|++ ...+.||++||.++..+.
T Consensus 66 vi~~Ag~~~-~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~ 134 (255)
T 2dkn_A 66 LVCCAGVGV-T-------AANSGLVVAVNYFGVSALLDGLAEALSR---GQQPAAVIVGSIAATQPGAAELPMVEAMLAG 134 (255)
T ss_dssp EEECCCCCT-T-------SSCHHHHHHHHTHHHHHHHHHHHHHHHT---SSSCEEEEECCGGGGSTTGGGCHHHHHHHHT
T ss_pred EEECCCCCC-c-------chhHHHHHHHHhHHHHHHHHHHHHHhhh---cCCceEEEEeccccccccccccchhhhhccc
Confidence 999999754 1 1238899999999999999999998754 234689999999988765
Q ss_pred -------------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--cccchhHHhh---cC
Q psy616 384 -------------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKS---SK 445 (1152)
Q Consensus 384 -------------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~---~g 445 (1152)
++...|+++|++++.|++.++.+.. ..++++.+|.+|..... |.... .......... ..
T Consensus 135 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~gi~v~~v~pg~v~~~-~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
T 2dkn_A 135 DEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWA--GRGVRLNVVAPGAVETP-LLQASKADPRYGESTRRFVAPL 211 (255)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHH--HTTCEEEEEEECCBCSH-HHHHHHHCTTTHHHHHSCCCTT
T ss_pred chhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHh--hcCcEEEEEcCCcccch-hhhhcccchhhHHHHHHHHHHh
Confidence 5677899999999999998776521 12458888888766443 21110 0001111111 11
Q ss_pred CCCCCHHHHHHHHHHHHhcC
Q psy616 446 QKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 446 ~~~l~~~e~~~~l~~~l~~~ 465 (1152)
...+.++++.+++..++..+
T Consensus 212 ~~~~~~~dva~~~~~l~~~~ 231 (255)
T 2dkn_A 212 GRGSEPREVAEAIAFLLGPQ 231 (255)
T ss_dssp SSCBCHHHHHHHHHHHHSGG
T ss_pred cCCCCHHHHHHHHHHHhCCC
Confidence 24688999999999888654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.4e-15 Score=164.78 Aligned_cols=183 Identities=20% Similarity=0.222 Sum_probs=136.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++++|||||+||||+++++.|+++|+ +|+++.|++... .+.++.++.+|++|.+++.++++ ++|
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 66 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDP--------AGPNEECVQCDLADANAVNAMVA-------GCD 66 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCC--------CCTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCccc--------cCCCCEEEEcCCCCHHHHHHHHc-------CCC
Confidence 47899999999999999999999987 556666654221 15678999999999999988775 689
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc------------cCC
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI------------LGD 383 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~------------~g~ 383 (1152)
+||||||+.. .+.|++++++|+.|++++.+++.+ ...+.||++||++++ .+.
T Consensus 67 ~vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~-------~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~ 130 (267)
T 3rft_A 67 GIVHLGGISV---------EKPFEQILQGNIIGLYNLYEAARA-------HGQPRIVFASSNHTIGYYPQTERLGPDVPA 130 (267)
T ss_dssp EEEECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHH-------TTCCEEEEEEEGGGGTTSBTTSCBCTTSCC
T ss_pred EEEECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEEcchHHhCCCCCCCCCCCCCCC
Confidence 9999999843 234788999999999999999632 245789999998877 233
Q ss_pred CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHh
Q psy616 384 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 384 ~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~ 463 (1152)
.....|+++|.+++.|++....+. +.+++.|..+.... ++... .. . ...+.+++..+.+.+++.
T Consensus 131 ~~~~~Y~~sK~~~e~~~~~~a~~~-----g~~~~~vr~~~v~~-~~~~~-----~~-~----~~~~~~~d~a~~~~~~~~ 194 (267)
T 3rft_A 131 RPDGLYGVSKCFGENLARMYFDKF-----GQETALVRIGSCTP-EPNNY-----RM-L----STWFSHDDFVSLIEAVFR 194 (267)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECBCSS-SCCST-----TH-H----HHBCCHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHh-----CCeEEEEEeecccC-CCCCC-----Cc-e----eeEEcHHHHHHHHHHHHh
Confidence 456889999999999998776431 22566666554432 22110 11 1 124788999999988887
Q ss_pred cCc
Q psy616 464 QDK 466 (1152)
Q Consensus 464 ~~~ 466 (1152)
.+.
T Consensus 195 ~~~ 197 (267)
T 3rft_A 195 APV 197 (267)
T ss_dssp CSC
T ss_pred CCC
Confidence 664
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-14 Score=155.51 Aligned_cols=188 Identities=17% Similarity=0.182 Sum_probs=135.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcE-EEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKA-IYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v-~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||+++++.|+++|. .|+++.|++... +++... .+ .++.+|++ +.+.+.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~---~~~~~~--~~~~~~~~Dl~---------~~~~~~~~~ 84 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQG---PELRER--GASDIVVANLE---------EDFSHAFAS 84 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGH---HHHHHT--TCSEEEECCTT---------SCCGGGGTT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHH---HHHHhC--CCceEEEcccH---------HHHHHHHcC
Confidence 578999999999999999999999987 555556654322 223333 46 78999998 345566789
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC---CCChhhh
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---FGSCDYA 390 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~---~g~~~Ya 390 (1152)
+|.||||||... . ++++..+++|+.|+.++.+++... ..+.||++||..+..+. .....|+
T Consensus 85 ~D~vi~~ag~~~-~--------~~~~~~~~~n~~~~~~l~~a~~~~-------~~~~iv~~SS~~~~~~~~~~~~~~~Y~ 148 (236)
T 3e8x_A 85 IDAVVFAAGSGP-H--------TGADKTILIDLWGAIKTIQEAEKR-------GIKRFIMVSSVGTVDPDQGPMNMRHYL 148 (236)
T ss_dssp CSEEEECCCCCT-T--------SCHHHHHHTTTHHHHHHHHHHHHH-------TCCEEEEECCTTCSCGGGSCGGGHHHH
T ss_pred CCEEEECCCCCC-C--------CCccccchhhHHHHHHHHHHHHHc-------CCCEEEEEecCCCCCCCCChhhhhhHH
Confidence 999999999754 2 357889999999999999996431 35689999997776654 4678999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
++|.+++.+.+ ..++ +++.|..+.+.+.+. ........ ........+.+++..+++..++..+
T Consensus 149 ~sK~~~e~~~~---~~gi------~~~~lrpg~v~~~~~-~~~~~~~~--~~~~~~~~i~~~Dva~~~~~~~~~~ 211 (236)
T 3e8x_A 149 VAKRLADDELK---RSSL------DYTIVRPGPLSNEES-TGKVTVSP--HFSEITRSITRHDVAKVIAELVDQQ 211 (236)
T ss_dssp HHHHHHHHHHH---HSSS------EEEEEEECSEECSCC-CSEEEEES--SCSCCCCCEEHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHH---HCCC------CEEEEeCCcccCCCC-CCeEEecc--CCCcccCcEeHHHHHHHHHHHhcCc
Confidence 99999998875 3443 788888777654321 11100000 0011245688999999999998765
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.4e-13 Score=160.99 Aligned_cols=281 Identities=12% Similarity=0.129 Sum_probs=189.5
Q ss_pred CCCCCCcCCCCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHH
Q psy616 697 IDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSA 776 (1152)
Q Consensus 697 ~~~FD~~~f~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ 776 (1152)
...||+.|+++..++...+.+...++.+++.+||++||+++++++ .+++++..+ + .. ...+.
T Consensus 77 p~~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id----~li~~t~~~-~--------~~-----p~~a~ 138 (387)
T 3a5r_A 77 PNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT----HLIVCCLAG-V--------DM-----PGADY 138 (387)
T ss_dssp HHHHSSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSC-C--------EE-----SCHHH
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCC-C--------CC-----CcHHH
Confidence 345889999999999999999999999999999999999988876 677776543 1 01 13578
Q ss_pred HHHHHcCCCCC---cccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCC
Q psy616 777 RLAYFMDLKGP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERA 853 (1152)
Q Consensus 777 ris~~~~l~GP---s~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a 853 (1152)
+++..+|++++ .+.|..+|+|++.||+.|++.|++|.++.+||+|++.+.. .+..++. +.++...
T Consensus 139 ~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~----------~~~~~~d--~~~~~~~ 206 (387)
T 3a5r_A 139 QLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT----------CFRGPSE--THLDSMI 206 (387)
T ss_dssp HHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTT----------TCCCCCS--SCCSSTT
T ss_pred HHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccch----------hhcCCCc--cchhhcc
Confidence 99999999986 7899999999999999999999999999999999997432 0112211 1112234
Q ss_pred CCcccccccEEEEEcccchhhcCC-CceEEEEEEEEEec--CCC-C-------CC----C--CCCC--HHHHHHHHHHHH
Q psy616 854 NGLVPSEAVVAVVLKRLSRALSDG-DPIHAIIRGSGINY--DGK-T-------NG----I--TAPN--GISQTELIKSVY 914 (1152)
Q Consensus 854 ~G~v~gEG~~~vvLk~l~~A~~dg-d~i~avI~g~a~~~--dG~-~-------~~----~--~~P~--~~~q~~~i~~al 914 (1152)
.++++|||++++||++.+.. + -.....+.+.+..+ ++. . .+ + ..|. .....++++++|
T Consensus 207 ~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 283 (387)
T 3a5r_A 207 GQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAF 283 (387)
T ss_dssp HHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred ccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHH
Confidence 68899999999999875431 1 11112344433221 111 0 00 0 0111 234457889999
Q ss_pred HHcCCC-CCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHHHHHHHhh-hcCC
Q psy616 915 KKSNLN-PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSI-KYKI 991 (1152)
Q Consensus 915 ~~Agi~-p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~lik~~l~l-~~~~ 991 (1152)
+++|++ ++|| ++-.|-.+...- +++.+.++-.. . .+... .+...+||+-+|+-...|-.++-.= +.|.
T Consensus 284 ~~~gl~d~~di-~~v~Hq~~~~i~-----~~~~~~lgl~~--e-k~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~ 354 (387)
T 3a5r_A 284 TPLNISDWNSL-FWIAHPGGPAIL-----DQVTAKVGLEK--E-KLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQ 354 (387)
T ss_dssp GGGTCCCGGGS-EEEECCSCHHHH-----HHHHHHHTCCG--G-GGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTC
T ss_pred HhcCCCChhhe-eEEECCCCHHHH-----HHHHHHcCCCh--H-HhHHHHHHHHhcCCcchhHHHHHHHHHHHhccccCC
Confidence 999998 8999 899998876543 34445554221 1 12222 3467789999998877776654321 1111
Q ss_pred cCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 992 IPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 992 ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
+.| .+.....++.+||.|-+-..++|+-
T Consensus 355 ~~~------------------------------G~~~d~vll~~fG~G~t~~~~ll~~ 382 (387)
T 3a5r_A 355 ATT------------------------------GEGLEWGVLFGFGPGITVETVVLRS 382 (387)
T ss_dssp SBT------------------------------TTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred CCC------------------------------CCCcceEEEEEecCcceeeehhhee
Confidence 100 0011345788999998988888874
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.50 E-value=4.4e-14 Score=166.34 Aligned_cols=271 Identities=12% Similarity=0.105 Sum_probs=181.8
Q ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC
Q psy616 707 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG 786 (1152)
Q Consensus 707 is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G 786 (1152)
+..+....+++...|+.+++.+||++||+++++++ .+++|+..+. .. ...+.+|+..||+++
T Consensus 114 ~~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id----~li~~t~~~~---------~~-----p~~a~~v~~~lGl~~ 175 (413)
T 1xes_A 114 LDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT----HLIFCSTTTP---------DL-----PGADFEVAKLLGLHP 175 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESCCC---------EE-----SCHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCCC---------cc-----chHHHHHHHHcCcCC
Confidence 44577777888999999999999999999988876 6778876431 11 125678999999998
Q ss_pred C---cccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccE
Q psy616 787 P---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVV 863 (1152)
Q Consensus 787 P---s~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~ 863 (1152)
+ .+.|..+|+|++.||..|++.|++|.+|.+||+|++.+.. .+..++. ++|+...+++++|||++
T Consensus 176 ~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~----------~~~~~~d--~~~~~~~~~~lfGDGA~ 243 (413)
T 1xes_A 176 SVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAV----------TFRGPSE--THLDSLVGQALFGDGAS 243 (413)
T ss_dssp TCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTT----------TCCCCCT--TCHHHHHHHHHBCCEEE
T ss_pred ccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhh----------hhcCCCc--cchhhcccceeEecccE
Confidence 5 7899999999999999999999999999999999997432 1223322 45666678999999999
Q ss_pred EEEEcccchhhcCCC-ceEEEEEEEEEec--CCCC--------CC----C--CCCC--HHHHHHHHHHHHHHcCCC-CCC
Q psy616 864 AVVLKRLSRALSDGD-PIHAIIRGSGINY--DGKT--------NG----I--TAPN--GISQTELIKSVYKKSNLN-PED 923 (1152)
Q Consensus 864 ~vvLk~l~~A~~dgd-~i~avI~g~a~~~--dG~~--------~~----~--~~P~--~~~q~~~i~~al~~Agi~-p~d 923 (1152)
++||++.+.. |- .....+.+.+... ++.. .+ + ..|. .....++++++|+++|++ .+|
T Consensus 244 A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~d 320 (413)
T 1xes_A 244 ALIVGADPIP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNK 320 (413)
T ss_dssp EEEEESSCCT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGG
T ss_pred EEEEecCCCc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 9999875431 20 0012344433211 1100 00 0 1111 234567889999999998 888
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHHHHHHHhh-hcCCcCCCCCCCCC
Q psy616 924 INYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSI-KYKIIPASLHCEKE 1001 (1152)
Q Consensus 924 I~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~lik~~l~l-~~~~ipp~~~~~~~ 1001 (1152)
| ++-.|-.+...- +++.+.++-.. .+ +... .+...+||+-+|+-...|-.++-.= +.|.+.|
T Consensus 321 i-~~v~Hq~~~~i~-----~~~~~~Lgl~~--ek-~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~------- 384 (413)
T 1xes_A 321 L-FWVVHPGGRAIL-----DRVEAKLNLDP--TK-LIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTT------- 384 (413)
T ss_dssp S-EEEECCSCHHHH-----HHHHHHTTCCT--TT-THHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBT-------
T ss_pred e-eEEECCCCHHHH-----HHHHHHcCCCh--HH-hHHHHHHHHhcCcCchhhHHHHHHHHHHhccccCCCCC-------
Confidence 8 899998766433 34455555322 11 2221 2456789999998877776654322 1111100
Q ss_pred CcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1002 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1002 np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
.+.....++.+||.|-+-..++|+-
T Consensus 385 -----------------------G~~~d~vll~~fG~G~t~~~~ll~~ 409 (413)
T 1xes_A 385 -----------------------GEGLEMGVLFGFGPGLTIETVVLKS 409 (413)
T ss_dssp -----------------------TTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred -----------------------CCCcceEEEEEecCCcEEeEEEEEe
Confidence 0011345788999999999999874
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.49 E-value=9.2e-14 Score=157.38 Aligned_cols=183 Identities=11% Similarity=-0.058 Sum_probs=135.1
Q ss_pred cCCCEEEEECCchhHHHHHHHHHH-HcCCcEEEEecCCcc------------hHHHHHHHHhCCCcEEEEEecCCCHHHH
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLI-NKYSTNLILSGRSKL------------NSIIYKKLKKFNNKAIYIQVDVSDKLKM 300 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La-~~Ga~~vil~~R~~~------------~~~~~~~l~~~g~~v~~~~~Dvsd~~~v 300 (1152)
...|++|||||++|||++++..|| +.|+.++++...++. .....+.+++.|.+...+.||++|.+++
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence 457999999999999999999999 567765555443322 1345567888899999999999999999
Q ss_pred HHHHHHHHhhcCCeeEEEEcccccCcC------------cc---------------------cccCCHHH---HHHHHhh
Q psy616 301 ISEINSIINNIGPIDGVLHIAGISGLT------------SN---------------------ILEANYKN---FYSVLSS 344 (1152)
Q Consensus 301 ~~~~~~~~~~~G~idgvIh~AG~~~~~------------~~---------------------~~~~~~e~---~~~~~~~ 344 (1152)
+++++++.++||+||+|||+++..... ++ +...+.++ +..+|..
T Consensus 128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~ 207 (401)
T 4ggo_A 128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG 207 (401)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence 999999999999999999999965210 00 11234444 4555555
Q ss_pred hchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc--cCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCC
Q psy616 345 KISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI--LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWP 422 (1152)
Q Consensus 345 kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~--~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg 422 (1152)
-....|...+...++| . +...+|.+|++.+. ++..+.+.+++||+.|++.+++++.+.. ++++..+..+
T Consensus 208 s~~s~w~~al~~a~ll---a--~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~----~~~a~v~v~~ 278 (401)
T 4ggo_A 208 EDWERWIKQLSKEGLL---E--EGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP----SIRAFVSVNK 278 (401)
T ss_dssp HHHHHHHHHHHHTTCE---E--EEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT----TEEEEEEECC
T ss_pred hHHHHHHHHHHhhhcc---c--CCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC----CCcEEEEEcC
Confidence 6666677766655543 1 34679999998874 3555667899999999999999998743 3456666655
Q ss_pred ccc
Q psy616 423 LWN 425 (1152)
Q Consensus 423 ~w~ 425 (1152)
+..
T Consensus 279 a~v 281 (401)
T 4ggo_A 279 GLV 281 (401)
T ss_dssp CCC
T ss_pred ccc
Confidence 553
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.8e-13 Score=148.90 Aligned_cols=194 Identities=12% Similarity=0.022 Sum_probs=131.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCc-EEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~-~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.++++|||||+||||+++++.|+++|+. +|+++.|++. .+.. . ...+.++.+|++|++++.++++
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~d~~~~~~~~~------- 83 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE----A--YKNVNQEVVDFEKLDDYASAFQ------- 83 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG----G--GGGCEEEECCGGGGGGGGGGGS-------
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc----c--cCCceEEecCcCCHHHHHHHhc-------
Confidence 4689999999999999999999999982 4555555532 1111 1 1247789999999887765543
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|.||||||... . .+.++..+++|+.|+.++.+++.. ...+.||++||.++.. .....|+++
T Consensus 84 ~~d~vi~~ag~~~-~-------~~~~~~~~~~n~~~~~~~~~~~~~-------~~~~~iv~~SS~~~~~--~~~~~Y~~s 146 (242)
T 2bka_A 84 GHDVGFCCLGTTR-G-------KAGAEGFVRVDRDYVLKSAELAKA-------GGCKHFNLLSSKGADK--SSNFLYLQV 146 (242)
T ss_dssp SCSEEEECCCCCH-H-------HHHHHHHHHHHTHHHHHHHHHHHH-------TTCCEEEEECCTTCCT--TCSSHHHHH
T ss_pred CCCEEEECCCccc-c-------cCCcccceeeeHHHHHHHHHHHHH-------CCCCEEEEEccCcCCC--CCcchHHHH
Confidence 6999999999754 1 135688999999999999887432 2456899999987764 345689999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhc-----CCCCCCHHHHHHHHHHHHhcCc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSS-----KQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~-----g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
|++++.+++.. +. . +++.|.++...+.+........ ........ ....+.+++..+++..++..+.
T Consensus 147 K~~~e~~~~~~---~~----~-~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 218 (242)
T 2bka_A 147 KGEVEAKVEEL---KF----D-RYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR 218 (242)
T ss_dssp HHHHHHHHHTT---CC----S-EEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHhc---CC----C-CeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc
Confidence 99999988642 21 1 5778887766543221100000 00000000 1235788999999988887654
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.45 E-value=5.8e-13 Score=152.66 Aligned_cols=168 Identities=15% Similarity=0.219 Sum_probs=122.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||.++++.|+++|+.++++..+.....+..+.+.. .+..+.++.+|++|.+++.++++. ++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 78 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP 78 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence 467999999999999999999999998655554434444444444433 255788999999999999988876 47
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC---------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 384 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~--------- 384 (1152)
+|.||||||... ... ..+.....++.|+.|+.++.+++. ....+.||++||.+.+ |..
T Consensus 79 ~d~vih~A~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~iv~~SS~~~~-g~~~~~~~~e~~ 145 (341)
T 3enk_A 79 ITAAIHFAALKA-VGE----SVAKPIEYYRNNLDSLLSLLRVMR-------ERAVKRIVFSSSATVY-GVPERSPIDETF 145 (341)
T ss_dssp CCEEEECCCCCC-HHH----HHHCHHHHHHHHHHHHHHHHHHHH-------HTTCCEEEEEEEGGGB-CSCSSSSBCTTS
T ss_pred CcEEEECccccc-cCc----cccChHHHHHHHHHHHHHHHHHHH-------hCCCCEEEEEecceEe-cCCCCCCCCCCC
Confidence 999999999865 222 223345678889999999988743 2245689999997654 322
Q ss_pred ---CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 385 ---GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 ---g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
....|+.+|.+.+.+++....+.. +.+++.+..+..
T Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~~lRp~~v 184 (341)
T 3enk_A 146 PLSATNPYGQTKLMAEQILRDVEAADP----SWRVATLRYFNP 184 (341)
T ss_dssp CCBCSSHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEECEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHhhcCC----CceEEEEeeccc
Confidence 236899999999999998766521 236666665444
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.2e-12 Score=143.77 Aligned_cols=241 Identities=16% Similarity=0.212 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCcccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs~tvdtaCs 796 (1152)
...|+.+++.+||++||+++++++ .|++|+...++. . + ..+.+++..+|++ .|++.|..+|+
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~~~~~~--------~----p-~~a~~v~~~lGl~~~~~~~v~~~C~ 120 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE----LIIVATTSHSHA--------Y----P-SAACQVQGLLNIDDAISFDLAAACT 120 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC----EEEEECSCCSCS--------S----S-CHHHHHHHHTTCSSCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC--------C----c-cHHHHHHHHhCCCCccEEEECCccH
Confidence 357889999999999999998887 788887654321 1 1 2578899999995 69999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||..|++.|++|+++.+||+|++.+.. .+.++ .......+|+|++++||++-+
T Consensus 121 s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~-----------~~~~~-------d~~~~~lfGDGA~A~vl~~~~----- 177 (323)
T 3il3_A 121 GFVYALSVADQFIRAGKVKKALVIGSDLNSR-----------KLDET-------DRSTVVLFGDGAGAVILEASE----- 177 (323)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-----------SCCTT-------CTTTTTTBCEEEEEEEEEEES-----
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEeecccc-----------ccCcc-------ccccccccccceEEEEEEEcC-----
Confidence 9999999999999999999999999997421 11111 123467899999999998743
Q ss_pred CCceEEEEEEEEEecCCCCC-CCCCC--------------C--------HHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy616 877 GDPIHAIIRGSGINYDGKTN-GITAP--------------N--------GISQTELIKSVYKKSNLNPEDINYIITHGTG 933 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~~~-~~~~P--------------~--------~~~q~~~i~~al~~Agi~p~dI~yve~hgtg 933 (1152)
+..|.. +...+||... .+..| + .....++++++|+++|++++||+++-.|-.+
T Consensus 178 ~~~i~~----~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~ 253 (323)
T 3il3_A 178 QEGIIS----THLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQAN 253 (323)
T ss_dssp SCCEEE----EEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCSC
T ss_pred CCCeEE----EEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence 233433 3333333211 01111 1 1223567899999999999999999999776
Q ss_pred CCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCee
Q psy616 934 TKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFY 1013 (1152)
Q Consensus 934 T~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~ 1013 (1152)
.+ =++++.+.++-...+ +.. . -...||+.+|+=...|..+ ++.|.+.|
T Consensus 254 ~~-----i~~~~~~~lgl~~ek---~~~-~-l~~~GNt~sasi~~~L~~~---~~~g~~~~------------------- 301 (323)
T 3il3_A 254 LR-----IITATAKKLEMDMSQ---VVV-T-LDKYANNSAATVPVALDEA---IRDGRIQR------------------- 301 (323)
T ss_dssp HH-----HHHHHHHHTTCCGGG---BCC-C-HHHHCBCGGGHHHHHHHHH---HHTTSSCT-------------------
T ss_pred HH-----HHHHHHHHcCcCHHH---hhc-c-HhhcCchHHHHHHHHHHHH---HHcCCCCC-------------------
Confidence 54 234555555432211 221 2 2356999998866666543 33432211
Q ss_pred eccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1014 INKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1014 v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
-.+.+..+||.|-+-+.++|+
T Consensus 302 --------------Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 302 --------------GQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp --------------TCEEEEEEEETTTEEEEEEEE
T ss_pred --------------CCEEEEEEEehhheeEEEEEE
Confidence 124568899999999998885
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.44 E-value=5e-13 Score=143.34 Aligned_cols=180 Identities=18% Similarity=0.255 Sum_probs=132.5
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCC-HHHHHHHHHHHHhhcCCeeE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSD-KLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd-~~~v~~~~~~~~~~~G~idg 316 (1152)
++|||||+|+||+++++.|+++|. .|+++.|+.... ... ..+.++.+|++| .+++.++++ .+|.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~------~~~-~~~~~~~~D~~d~~~~~~~~~~-------~~d~ 66 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQV------PQY-NNVKAVHFDVDWTPEEMAKQLH-------GMDA 66 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGS------CCC-TTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccch------hhc-CCceEEEecccCCHHHHHHHHc-------CCCE
Confidence 589999999999999999999986 555566654211 111 468999999999 888776553 6999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-------Chhh
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-------SCDY 389 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g-------~~~Y 389 (1152)
||||||... .. .+++|+.|+.++.+++. ....+.||++||+.+..+.+. ...|
T Consensus 67 vi~~ag~~~-~~------------~~~~n~~~~~~l~~a~~-------~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y 126 (219)
T 3dqp_A 67 IINVSGSGG-KS------------LLKVDLYGAVKLMQAAE-------KAEVKRFILLSTIFSLQPEKWIGAGFDALKDY 126 (219)
T ss_dssp EEECCCCTT-SS------------CCCCCCHHHHHHHHHHH-------HTTCCEEEEECCTTTTCGGGCCSHHHHHTHHH
T ss_pred EEECCcCCC-CC------------cEeEeHHHHHHHHHHHH-------HhCCCEEEEECcccccCCCcccccccccccHH
Confidence 999999865 21 67789999999999853 234568999999887766665 7899
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+.+|.+++.+.+ +.. +.+++.|..+.+.+.+.. . ... +.......+.+++.++++..++..+.
T Consensus 127 ~~sK~~~e~~~~--~~~------~i~~~ilrp~~v~g~~~~-~-~~~----~~~~~~~~i~~~Dva~~i~~~l~~~~ 189 (219)
T 3dqp_A 127 YIAKHFADLYLT--KET------NLDYTIIQPGALTEEEAT-G-LID----INDEVSASNTIGDVADTIKELVMTDH 189 (219)
T ss_dssp HHHHHHHHHHHH--HSC------CCEEEEEEECSEECSCCC-S-EEE----ESSSCCCCEEHHHHHHHHHHHHTCGG
T ss_pred HHHHHHHHHHHH--hcc------CCcEEEEeCceEecCCCC-C-ccc----cCCCcCCcccHHHHHHHHHHHHhCcc
Confidence 999999998886 333 348888888776543211 0 000 11233457889999999999997754
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-12 Score=153.96 Aligned_cols=167 Identities=18% Similarity=0.219 Sum_probs=121.6
Q ss_pred CCEEEEECCchhHHHHHHHHHH-HcCCcEEEEecCCc-c---------hHHHHHHHHhCC-----Cc---EEEEEecCCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLI-NKYSTNLILSGRSK-L---------NSIIYKKLKKFN-----NK---AIYIQVDVSD 296 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La-~~Ga~~vil~~R~~-~---------~~~~~~~l~~~g-----~~---v~~~~~Dvsd 296 (1152)
+.++|||||+|+||.++++.|+ ++|.. |+++.|+. . .+.+.+.++... .. +.++.+|++|
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHS-VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCE-EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCE-EEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 3579999999999999999999 99875 44455542 2 233333333331 24 8899999999
Q ss_pred HHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecC
Q psy616 297 KLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSS 376 (1152)
Q Consensus 297 ~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS 376 (1152)
.+++.+++++ ++++|+||||||... .. .+.++++..+++|+.|+.++.+++.. ...+.||++||
T Consensus 81 ~~~~~~~~~~----~~~~d~vih~A~~~~-~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~-------~~~~~iv~~SS 144 (397)
T 1gy8_A 81 EDFLNGVFTR----HGPIDAVVHMCAFLA-VG----ESVRDPLKYYDNNVVGILRLLQAMLL-------HKCDKIIFSSS 144 (397)
T ss_dssp HHHHHHHHHH----SCCCCEEEECCCCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHHH-------TTCCEEEEEEE
T ss_pred HHHHHHHHHh----cCCCCEEEECCCccC-cC----cchhhHHHHHHHHhHHHHHHHHHHHH-------hCCCEEEEECC
Confidence 9998877753 567999999999754 21 14466788999999999999998532 24568999999
Q ss_pred CccccCCCC-------------------ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 377 SSAILGDFG-------------------SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 377 ~a~~~g~~g-------------------~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
.+ .+|... ...|+++|.+++.+++....+. +.+++.+..+..-
T Consensus 145 ~~-v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-----gi~~~ilRp~~v~ 206 (397)
T 1gy8_A 145 AA-IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY-----GIKGICLRYFNAC 206 (397)
T ss_dssp GG-GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECEEE
T ss_pred HH-HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH-----CCcEEEEecccee
Confidence 64 444433 5789999999999998876541 2367777665543
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-12 Score=150.76 Aligned_cols=167 Identities=14% Similarity=0.176 Sum_probs=121.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc------hHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL------NSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~------~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
++++|||||+|+||.++++.|+++|..++++..+... ..+..+.++. .+.++.++.+|++|.+++.++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 80 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY- 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence 3689999999999999999999999865555432221 2233344433 2556888999999999998887652
Q ss_pred hhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC------
Q psy616 309 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------ 382 (1152)
Q Consensus 309 ~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g------ 382 (1152)
++|.|||+||... ... +.+++...+++|+.|+.++.+++. ....+.||++||.+.+-.
T Consensus 81 ----~~d~vih~A~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~iv~~SS~~~~g~~~~~~~ 144 (348)
T 1ek6_A 81 ----SFMAVIHFAGLKA-VGE----SVQKPLDYYRVNLTGTIQLLEIMK-------AHGVKNLVFSSSATVYGNPQYLPL 144 (348)
T ss_dssp ----CEEEEEECCSCCC-HHH----HHHCHHHHHHHHHHHHHHHHHHHH-------HTTCCEEEEEEEGGGGCSCSSSSB
T ss_pred ----CCCEEEECCCCcC-ccc----hhhchHHHHHHHHHHHHHHHHHHH-------HhCCCEEEEECcHHHhCCCCCCCc
Confidence 7999999999754 211 345678899999999999998743 224568999999765421
Q ss_pred ------CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCc
Q psy616 383 ------DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPL 423 (1152)
Q Consensus 383 ------~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~ 423 (1152)
.++...|+.+|.+++.+++....++ .+.+++.+..+.
T Consensus 145 ~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~lR~~~ 187 (348)
T 1ek6_A 145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD----KTWNAVLLRYFN 187 (348)
T ss_dssp CTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC----TTCEEEEEEECE
T ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHHhcC----CCcceEEEeecc
Confidence 1336789999999999998876553 123666666543
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=8.4e-13 Score=150.91 Aligned_cols=146 Identities=14% Similarity=0.096 Sum_probs=111.0
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.-.++++|||||+|+||.++++.|+++|.. |+++.|+. ...+..+ .. .++.++.+|++|.+++.++++++
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~---~l-~~v~~~~~Dl~d~~~~~~~~~~~---- 87 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHE-ILVIDNFATGKREVLP---PV-AGLSVIEGSVTDAGLLERAFDSF---- 87 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCE-EEEEECCSSSCGGGSC---SC-TTEEEEECCTTCHHHHHHHHHHH----
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCCccchhhhh---cc-CCceEEEeeCCCHHHHHHHHhhc----
Confidence 345789999999999999999999999975 55555542 2111111 11 46889999999999999888765
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-----C--
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-----F-- 384 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-----~-- 384 (1152)
++|.||||||... .. +.++++ +++|+.|+.++.+++... ..+.||++||.+.+-+. +
T Consensus 88 -~~D~vih~A~~~~-~~-----~~~~~~--~~~N~~~~~~l~~a~~~~-------~~~~iV~~SS~~~~~~~~~~~~~~~ 151 (330)
T 2pzm_A 88 -KPTHVVHSAAAYK-DP-----DDWAED--AATNVQGSINVAKAASKA-------GVKRLLNFQTALCYGRPATVPIPID 151 (330)
T ss_dssp -CCSEEEECCCCCS-CT-----TCHHHH--HHHHTHHHHHHHHHHHHH-------TCSEEEEEEEGGGGCSCSSSSBCTT
T ss_pred -CCCEEEECCccCC-Cc-----cccChh--HHHHHHHHHHHHHHHHHc-------CCCEEEEecCHHHhCCCccCCCCcC
Confidence 6999999999765 22 445666 999999999999997531 35689999998764332 2
Q ss_pred ----CChhhhHHHHHHHHHHHHH
Q psy616 385 ----GSCDYAMGNRFQTVYAKYL 403 (1152)
Q Consensus 385 ----g~~~Yaaana~l~~la~~~ 403 (1152)
....|+++|.+++.+++..
T Consensus 152 E~~~~~~~Y~~sK~~~e~~~~~~ 174 (330)
T 2pzm_A 152 SPTAPFTSYGISKTAGEAFLMMS 174 (330)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHTC
T ss_pred CCCCCCChHHHHHHHHHHHHHHc
Confidence 5678999999999998764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.7e-12 Score=150.03 Aligned_cols=175 Identities=17% Similarity=0.135 Sum_probs=126.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||.++++.|+++|.. |+++.|+ ...+...+.+. .+.++.++.+|++|.+++.++++.+ +
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 80 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGAT-VKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----Q 80 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCe-EEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----C
Confidence 4678999999999999999999999875 4445554 33222333332 2456888999999999999888765 6
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc------------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL------------ 381 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~------------ 381 (1152)
+|.|||+||... ...+.+++...+++|+.|+.++.+++.+. ...+.||++||.+.+-
T Consensus 81 ~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~~~v~~SS~~vyg~~~~~~~~~E~~ 149 (357)
T 1rkx_A 81 PEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV------GGVKAVVNITSDKCYDNKEWIWGYRENE 149 (357)
T ss_dssp CSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH------CCCCEEEEECCGGGBCCCCSSSCBCTTS
T ss_pred CCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh------CCCCeEEEecCHHHhCCCCcCCCCCCCC
Confidence 999999998632 12345668889999999999999997542 2256899999986421
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhcccc----cCCCceEEEEeCCcccCc
Q psy616 382 GDFGSCDYAMGNRFQTVYAKYLNNKNIY----KKYTNKLITINWPLWNNS 427 (1152)
Q Consensus 382 g~~g~~~Yaaana~l~~la~~~~~~g~~----~~~~~~~~si~wg~w~~~ 427 (1152)
+......|+.+|.+.+.+++..+.+... ...+.+++.+..+..-+.
T Consensus 150 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~ 199 (357)
T 1rkx_A 150 AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG 199 (357)
T ss_dssp CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCC
Confidence 1234578999999999999887653100 001347888887766543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-12 Score=148.81 Aligned_cols=166 Identities=19% Similarity=0.195 Sum_probs=125.9
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHc-CCcEEEEecCCcch-HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLN-SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~-Ga~~vil~~R~~~~-~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
-.++++|||||+|+||.+++++|+++ |...|++++|++.. +.+.+.+. ..++.++.+|++|.+++.++++
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~------ 90 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE------ 90 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT------
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh------
Confidence 35789999999999999999999999 87677777777432 22333332 3568899999999988877653
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
.+|.|||+||... . +.. .......+++|+.|+.++.+++.+. ..+.||++||..+..+ ...|++
T Consensus 91 -~~D~Vih~Aa~~~-~-~~~---~~~~~~~~~~Nv~gt~~l~~aa~~~-------~v~~~V~~SS~~~~~p---~~~Y~~ 154 (344)
T 2gn4_A 91 -GVDICIHAAALKH-V-PIA---EYNPLECIKTNIMGASNVINACLKN-------AISQVIALSTDKAANP---INLYGA 154 (344)
T ss_dssp -TCSEEEECCCCCC-H-HHH---HHSHHHHHHHHHHHHHHHHHHHHHT-------TCSEEEEECCGGGSSC---CSHHHH
T ss_pred -cCCEEEECCCCCC-C-Cch---hcCHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEEecCCccCCC---ccHHHH
Confidence 6899999999754 2 221 2335678999999999999997542 4568999999876543 478999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
+|.+++.+++..+.+.. ..+++++++.++...
T Consensus 155 sK~~~E~~~~~~~~~~~--~~g~~~~~vRpg~v~ 186 (344)
T 2gn4_A 155 TKLCSDKLFVSANNFKG--SSQTQFSVVRYGNVV 186 (344)
T ss_dssp HHHHHHHHHHHGGGCCC--SSCCEEEEECCCEET
T ss_pred HHHHHHHHHHHHHHHhC--CCCcEEEEEEeccEE
Confidence 99999999988765421 234588888877654
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4.3e-13 Score=157.06 Aligned_cols=215 Identities=15% Similarity=0.183 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEE-EEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGM-FVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTA 794 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv-~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdta 794 (1152)
...+.++++.+||++ + +..+++. ++|+..+.+. . ...+..|+..||++ .|++.|.++
T Consensus 51 ~~~la~~Aa~~aL~~--~-----~~~~Id~li~~t~~~~~~------------~-p~~a~~v~~~lGl~~~~~~~~v~~a 110 (396)
T 1xpm_A 51 IVSMGANAAKDIITD--E-----DKKKIGMVIVATESAVDA------------A-KAAAVQIHNLLGIQPFARCFEMKEA 110 (396)
T ss_dssp HHHHHHHHHHTTCCH--H-----HHHHEEEEEEECSSCSBS------------S-SCHHHHHHHHTTCCSSCEEEEEEST
T ss_pred HHHHHHHHHHHHHhc--C-----CHHHCCEEEEEeCCCCCC------------C-CCHHHHHHHHhCCCCCceEEEeccc
Confidence 356888999999987 3 3345665 4565543211 1 13578899999997 499999999
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhh
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 874 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~ 874 (1152)
|+|++.||..|++.|++|.++.+||+|++. .... +| ..++++.|||++++||++.
T Consensus 111 C~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s~~~-------------------~~-~~~~~~~GdGA~A~vl~~~---- 165 (396)
T 1xpm_A 111 CYAATPAIQLAKDYLATRPNEKVLVIATDT-ARYG-------------------LN-SGGEPTQGAGAVAMVIAHN---- 165 (396)
T ss_dssp TTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-ECCC-------------------TT-CSSGGGCEEEEEEEEEEES----
T ss_pred cHHHHHHHHHHHHHHHcCCCCEEEEEeehh-hccc-------------------cC-CCCCcccccceEEEEeccC----
Confidence 999999999999999999999999999996 2110 11 1369999999999999863
Q ss_pred cCCCceEEEEEEEEEec-CCCCCCCCCC--------CHHH--------HHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy616 875 SDGDPIHAIIRGSGINY-DGKTNGITAP--------NGIS--------QTELIKSVYKKSNLNPEDINYIITHGTGTKLG 937 (1152)
Q Consensus 875 ~dgd~i~avI~g~a~~~-dG~~~~~~~P--------~~~~--------q~~~i~~al~~Agi~p~dI~yve~hgtgT~~g 937 (1152)
..|++...+.+... |... +..| ++.. ..++++++|+++|++++||+|+-.|+++|++.
T Consensus 166 ---~~i~~~~~~~g~~~~d~~~--~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~~ 240 (396)
T 1xpm_A 166 ---PSILALNEDAVAYTEDVYD--FWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMG 240 (396)
T ss_dssp ---CSSEEECSCCEEEECCCCS--EECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHH
T ss_pred ---CceEEEEeccccccceEEE--eeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHHH
Confidence 34766655433222 3221 1222 4443 67889999999999999999999999999987
Q ss_pred CHHHHHHHHHHhcccCCCCCc---e-eeeccCCCCCccccchhhHHHHHHH
Q psy616 938 DPVEINALHDVFKNKTYNQKF---C-AITSNKSNIGHTFAASGLVSLINLV 984 (1152)
Q Consensus 938 D~~E~~al~~~f~~~~~~~~~---~-~igsvKsniGH~~~AaG~~~lik~~ 984 (1152)
|.+....+....+- . .... + +--.+-..+||+.+|+-..+|..++
T Consensus 241 ~~~~~~l~~~~~~~-~-~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l 289 (396)
T 1xpm_A 241 KKALESIIDNADET-T-QERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLL 289 (396)
T ss_dssp HHHHHTTGGGSCHH-H-HHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHhhcccC-C-HHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHH
Confidence 76553321110000 0 0000 0 0001236789999999888876654
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=3.1e-12 Score=146.75 Aligned_cols=168 Identities=15% Similarity=0.117 Sum_probs=123.9
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC--cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~--~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++|||||+|+||.++++.|+++|..+++ +.|. .......+.+... .++.++.+|++|.+++.++++.. ++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~ 74 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIV-FDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNKNDVTRLITKY-----MP 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE-EECCCSTTHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEE-EeCCCccCchhhhhhhccC-CceEEEEcCCCCHHHHHHHHhcc-----CC
Confidence 47999999999999999999999875444 4442 2233334455443 35788999999999999888762 79
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC------------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------ 382 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g------------ 382 (1152)
|.|||+||... . +.+.++++..+++|+.|+.++.+++.+.+ ..+.||++||.+.+-+
T Consensus 75 d~vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~------~~~~iv~~SS~~v~g~~~~~~~~e~~~~ 143 (347)
T 1orr_A 75 DSCFHLAGQVA-M----TTSIDNPCMDFEINVGGTLNLLEAVRQYN------SNCNIIYSSTNKVYGDLEQYKYNETETR 143 (347)
T ss_dssp SEEEECCCCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHHHHHC------TTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred CEEEECCcccC-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHhC------CCceEEEeccHHHhCCCCcCCccccccc
Confidence 99999999754 1 22345778899999999999999987642 1147999999764321
Q ss_pred ---------------CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCc
Q psy616 383 ---------------DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNS 427 (1152)
Q Consensus 383 ---------------~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~ 427 (1152)
......|+.+|.+.+.+++....+. +.+++.+..+...+.
T Consensus 144 ~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----gi~~~ilrp~~v~g~ 198 (347)
T 1orr_A 144 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF-----GLNTVVFRHSSMYGG 198 (347)
T ss_dssp EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECCEECT
T ss_pred ccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh-----CCcEEEEccCceeCc
Confidence 1246789999999999998876541 237778877765543
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.5e-12 Score=149.29 Aligned_cols=153 Identities=19% Similarity=0.183 Sum_probs=114.8
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++|||||+|+||.++++.|+++|. .|+++.|+...... ..++.. +.++.++.+|++|.+++.++++.+ +
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 75 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFAS-WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----Q 75 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTT-HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCccccc-ccHhhccccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence 57899999999999999999999987 55555665322110 222322 246889999999999999988775 6
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-----------cC
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-----------LG 382 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-----------~g 382 (1152)
+|.||||||... . +.+.++++..+++|+.|+.++.+++... . ..+.||++||.+.+ .+
T Consensus 76 ~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~--~~~~iv~~SS~~vyg~~~~~~~~e~~~ 144 (345)
T 2z1m_A 76 PDEVYNLAAQSF-V----GVSFEQPILTAEVDAIGVLRILEALRTV----K--PDTKFYQASTSEMFGKVQEIPQTEKTP 144 (345)
T ss_dssp CSEEEECCCCCC-H----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----C--TTCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred CCEEEECCCCcc-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHh----C--CCceEEEEechhhcCCCCCCCCCccCC
Confidence 999999999753 1 1234567889999999999999997642 1 12679999998543 12
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhc
Q psy616 383 DFGSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 383 ~~g~~~Yaaana~l~~la~~~~~~ 406 (1152)
......|+++|.+.+.+++..+.+
T Consensus 145 ~~~~~~Y~~sK~~~e~~~~~~~~~ 168 (345)
T 2z1m_A 145 FYPRSPYAVAKLFGHWITVNYREA 168 (345)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHHHHHHHHHHH
Confidence 345678999999999999887654
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-12 Score=140.55 Aligned_cols=194 Identities=11% Similarity=0.052 Sum_probs=136.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+++|||||+|+||..+++.|+++|. .|+++.|++.. +......+.++.+|++|.+++.++++ .+|
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 69 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEK------IKIENEHLKVKKADVSSLDEVCEVCK-------GAD 69 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGG------CCCCCTTEEEECCCTTCHHHHHHHHT-------TCS
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCccc------chhccCceEEEEecCCCHHHHHHHhc-------CCC
Confidence 36899999999999999999999986 66666776432 11223568999999999999887765 489
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC----------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG---------- 385 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g---------- 385 (1152)
.|||+||... .. ...+++|+.++.++.+++.. .....||++||.....+.++
T Consensus 70 ~vi~~a~~~~-~~----------~~~~~~n~~~~~~l~~~~~~-------~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p 131 (227)
T 3dhn_A 70 AVISAFNPGW-NN----------PDIYDETIKVYLTIIDGVKK-------AGVNRFLMVGGAGSLFIAPGLRLMDSGEVP 131 (227)
T ss_dssp EEEECCCC-----------------CCSHHHHHHHHHHHHHHH-------TTCSEEEEECCSTTSEEETTEEGGGTTCSC
T ss_pred EEEEeCcCCC-CC----------hhHHHHHHHHHHHHHHHHHH-------hCCCEEEEeCChhhccCCCCCccccCCcch
Confidence 9999998653 11 12678899999999998532 24568999999887665543
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc--hhHHhhcCCCCCCHHHHHHHHHHHHh
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT--DFYFKSSKQKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~--~~~~~~~g~~~l~~~e~~~~l~~~l~ 463 (1152)
...|+.+|...+.+.+.++.+ .+.+++.+..+.+-+.+......... .......+...+..++.++++..++.
T Consensus 132 ~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~ 206 (227)
T 3dhn_A 132 ENILPGVKALGEFYLNFLMKE-----KEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELE 206 (227)
T ss_dssp GGGHHHHHHHHHHHHHTGGGC-----CSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhc-----cCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHh
Confidence 578999999999888877642 23478888877654333221110000 00011223456889999999999998
Q ss_pred cCc
Q psy616 464 QDK 466 (1152)
Q Consensus 464 ~~~ 466 (1152)
.+.
T Consensus 207 ~~~ 209 (227)
T 3dhn_A 207 HPK 209 (227)
T ss_dssp SCC
T ss_pred Ccc
Confidence 764
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=148.93 Aligned_cols=163 Identities=17% Similarity=0.108 Sum_probs=120.4
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
..+.+++|||||+|+||.++++.|+++|. .|+++.|+...+. + .+.++.+|++|.+++.++++. +
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~----l-----~~~~~~~Dl~d~~~~~~~~~~-----~ 73 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEAKL----P-----NVEMISLDIMDSQRVKKVISD-----I 73 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTCCC----T-----TEEEEECCTTCHHHHHHHHHH-----H
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcccc----c-----eeeEEECCCCCHHHHHHHHHh-----c
Confidence 45678999999999999999999999987 4555566543211 1 578899999999999988875 4
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC---------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--------- 383 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~--------- 383 (1152)
++|.|||+||... . +.+.++++..+++|+.|+.++.+++ +.+ ...+.||++||.+.+-+.
T Consensus 74 ~~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~-----~~~~~iv~~SS~~v~g~~~~~~~~~~E 142 (321)
T 2pk3_A 74 KPDYIFHLAAKSS-V----KDSWLNKKGTFSTNVFGTLHVLDAV-RDS-----NLDCRILTIGSSEEYGMILPEESPVSE 142 (321)
T ss_dssp CCSEEEECCSCCC-H----HHHTTCHHHHHHHHHHHHHHHHHHH-HHH-----TCCCEEEEEEEGGGTBSCCGGGCSBCT
T ss_pred CCCEEEEcCcccc-h----hhhhhcHHHHHHHHHHHHHHHHHHH-HHh-----CCCCeEEEEccHHhcCCCCCCCCCCCC
Confidence 7999999999754 1 1223357889999999999999997 432 135679999998654322
Q ss_pred ----CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 384 ----FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 384 ----~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
.....|+.+|.+++.+++..+.+. +.+++.+..+..-+
T Consensus 143 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----gi~~~ilrp~~v~g 184 (321)
T 2pk3_A 143 ENQLRPMSPYGVSKASVGMLARQYVKAY-----GMDIIHTRTFNHIG 184 (321)
T ss_dssp TSCCBCCSHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECEEEC
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHc-----CCCEEEEEeCcccC
Confidence 356789999999999998776541 23777777665543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=9.9e-13 Score=143.63 Aligned_cols=200 Identities=15% Similarity=0.045 Sum_probs=133.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~G-a~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||.+++++|+++| ..+|+++.|++.. .+. .+.++.++.+|++|.+++.++++ .
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~---~~~---~~~~~~~~~~D~~d~~~~~~~~~-------~ 69 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG---KEK---IGGEADVFIGDITDADSINPAFQ-------G 69 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH---HHH---TTCCTTEEECCTTSHHHHHHHHT-------T
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc---hhh---cCCCeeEEEecCCCHHHHHHHHc-------C
Confidence 36789999999999999999999994 3466667776421 122 24456789999999998887764 4
Q ss_pred eeEEEEcccccCcCcc---------cccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC
Q psy616 314 IDGVLHIAGISGLTSN---------ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 384 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~---------~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~ 384 (1152)
+|.||||||... ... ..+.+.+++...+++|+.++.++.+++... ..+.||++||..+.....
T Consensus 70 ~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~iv~~SS~~~~~~~~ 141 (253)
T 1xq6_A 70 IDALVILTSAVP-KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-------GVKHIVVVGSMGGTNPDH 141 (253)
T ss_dssp CSEEEECCCCCC-EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-------TCSEEEEEEETTTTCTTC
T ss_pred CCEEEEeccccc-cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-------CCCEEEEEcCccCCCCCC
Confidence 899999999754 211 122233455678899999999999886432 356899999988765443
Q ss_pred CCh-----hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--cccchhHHhhcCCCCCCHHHHHHH
Q psy616 385 GSC-----DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSKQKVLHENDGLKL 457 (1152)
Q Consensus 385 g~~-----~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g~~~l~~~e~~~~ 457 (1152)
... .|+.+|.+++.+.+. .+ ++++.|..+.+.+.+..... ........ ......+.+++..++
T Consensus 142 ~~~~~~~~~y~~sK~~~e~~~~~---~~------i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dva~~ 211 (253)
T 1xq6_A 142 PLNKLGNGNILVWKRKAEQYLAD---SG------TPYTIIRAGGLLDKEGGVRELLVGKDDELL-QTDTKTVPRADVAEV 211 (253)
T ss_dssp GGGGGGGCCHHHHHHHHHHHHHT---SS------SCEEEEEECEEECSCSSSSCEEEESTTGGG-GSSCCEEEHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHh---CC------CceEEEecceeecCCcchhhhhccCCcCCc-CCCCcEEcHHHHHHH
Confidence 333 356689999888752 33 37777877765443211000 00001111 123346788999999
Q ss_pred HHHHHhcC
Q psy616 458 FEQLLIQD 465 (1152)
Q Consensus 458 l~~~l~~~ 465 (1152)
+..++..+
T Consensus 212 ~~~~~~~~ 219 (253)
T 1xq6_A 212 CIQALLFE 219 (253)
T ss_dssp HHHHTTCG
T ss_pred HHHHHcCc
Confidence 98888654
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-11 Score=142.32 Aligned_cols=246 Identities=14% Similarity=0.203 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccccccch
Q psy616 717 PRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACS 796 (1152)
Q Consensus 717 pq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCs 796 (1152)
-...|..+++.+||++||+++++++ .|++|+...++. .+ ..+.+++..+|++.|++.|+.+|+
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId----~vi~~t~t~~~~--------~p-----~~a~~v~~~LGl~~~~~dv~~aC~ 178 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIG----AVLCACSNMQRA--------YP-----AMAIEVQNALGLGGFAFDMNVACS 178 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEE----EEEEESSCCSCS--------BS-----CHHHHHHHHTTCCSEEEEEECGGG
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC--------cc-----HHHHHHHHHhCCCCeEEEECCccH
Confidence 4568999999999999999988776 678876654321 11 257889999999999999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||..|++.|++|.++.+||+|++.+ +. .+.++ | ....+.+|+|++++||++-+... .
T Consensus 179 g~~~aL~~A~~~i~~g~~~~vLvvg~E~~-S~----------~~d~~------d-r~t~~lFGDGA~A~vl~~~~~~~-~ 239 (392)
T 3led_A 179 SATFGLKTAADFVGGGSVDAVLMVNPEIC-SG----------HLNFR------D-RDSHFIFGDVATAAIVERADDAQ-G 239 (392)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEEG-GG----------GCCTT------C-TTTTTTBCEEEEEEEEEEGGGCC-S
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEeehhc-CC----------cCCcC------c-ccCCcccccccEEEEEEecCCCC-C
Confidence 99999999999999999999999999974 21 11111 1 23468899999999998754310 1
Q ss_pred CCceEEEEEEEEEecCCCC-----CC---------------CCCCCH--------HHHHHHHHHHHHHcCCCCCCccEEE
Q psy616 877 GDPIHAIIRGSGINYDGKT-----NG---------------ITAPNG--------ISQTELIKSVYKKSNLNPEDINYII 928 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~~-----~~---------------~~~P~~--------~~q~~~i~~al~~Agi~p~dI~yve 928 (1152)
+.. |.++...+++.. .+ ....++ ....++++++|+++|++++||+++-
T Consensus 240 ~~~----i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dId~~v 315 (392)
T 3led_A 240 GWS----ILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGLKRMW 315 (392)
T ss_dssp SEE----EEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred CCe----EEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 122 333333333321 00 001122 2234678999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHh-cccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCccccc
Q psy616 929 THGTGTKLGDPVEINALHDVF-KNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIIL 1007 (1152)
Q Consensus 929 ~hgtgT~~gD~~E~~al~~~f-~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~ 1007 (1152)
.|-.+..+ ++++.+.+ +-.-+..+ .. .+=...||+-+|+=...|-. + .+.+.
T Consensus 316 ~Hqan~~i-----~~~~~~~llgl~~~~~k-~~--~~l~~~GNtssAsipl~L~~----~-~~~~~-------------- 368 (392)
T 3led_A 316 LHQANINM-----NEIIGRKVLGRDPTRDE-NV--IILDDYANTSSAGSIIAFHK----H-QDDMA-------------- 368 (392)
T ss_dssp ECSSCHHH-----HHHHHHHHHTSCCCTTT-BC--CCHHHHCBCGGGHHHHHHHH----C-CTTCC--------------
T ss_pred EcCCCHHH-----HHHHHHHhcCCCCCHHH-HH--HHHhhhCccHHHHHHHHHHH----H-hCCCC--------------
Confidence 99766442 33444443 42111111 11 12345799977764433322 1 11110
Q ss_pred CCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1008 KNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1008 ~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+-...++.+||.|-+-+.++|+
T Consensus 369 -------------------~Gd~vll~gfG~G~t~~~~ll~ 390 (392)
T 3led_A 369 -------------------QGDLGLICSFGAGYSAGTVFVQ 390 (392)
T ss_dssp -------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred -------------------CCCEEEEEEEChhhEeEEEEEE
Confidence 0134578899999999999986
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2.2e-12 Score=147.63 Aligned_cols=168 Identities=18% Similarity=0.124 Sum_probs=120.0
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHh-CCCcEEEE-EecCCCHHHHHHHHHHHHh
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKK-FNNKAIYI-QVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~-~g~~v~~~-~~Dvsd~~~v~~~~~~~~~ 309 (1152)
+.+++++|||||+|+||.++++.|+++|. .|+++.|+.. .+.+.+.+.. .+.++.++ .+|++|.+++.++++
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 82 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK---- 82 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT----
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc----
Confidence 34678999999999999999999999987 5555566532 2233333322 24568888 899999877765543
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-C----
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F---- 384 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-~---- 384 (1152)
.+|.|||+||... .. +++...+++|+.|+.++.+++.+ ......||++||.+.+... +
T Consensus 83 ---~~d~vih~A~~~~-~~-------~~~~~~~~~n~~g~~~ll~~~~~------~~~~~~iv~~SS~~~~~~~~~~~~~ 145 (342)
T 1y1p_A 83 ---GAAGVAHIASVVS-FS-------NKYDEVVTPAIGGTLNALRAAAA------TPSVKRFVLTSSTVSALIPKPNVEG 145 (342)
T ss_dssp ---TCSEEEECCCCCS-CC-------SCHHHHHHHHHHHHHHHHHHHHT------CTTCCEEEEECCGGGTCCCCTTCCC
T ss_pred ---CCCEEEEeCCCCC-CC-------CCHHHHHHHHHHHHHHHHHHHHh------CCCCcEEEEeccHHHhcCCCCCCCC
Confidence 6899999999765 21 24567999999999999998642 2345789999998765321 1
Q ss_pred --------------------------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 385 --------------------------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 385 --------------------------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
....|+++|.+.+.+++....+. +.+.+++.+..+...
T Consensus 146 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~rp~~v~ 209 (342)
T 1y1p_A 146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN---KPHFTLNAVLPNYTI 209 (342)
T ss_dssp CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH---CCSSEEEEEEESEEE
T ss_pred cccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhc---CCCceEEEEcCCceE
Confidence 23579999999999998876542 113466667665543
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=3.1e-12 Score=147.51 Aligned_cols=167 Identities=17% Similarity=0.163 Sum_probs=121.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHh-C----CCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKK-F----NNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~-~----g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
.++++|||||+|+||..+++.|+++|.. |+++.|+.. ..+....+.+ . +.++.++.+|++|.+++.++++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 101 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQK-VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--- 101 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence 4678999999999999999999999875 554555432 2222222221 1 2468899999999988877764
Q ss_pred hhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC----
Q psy616 309 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF---- 384 (1152)
Q Consensus 309 ~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~---- 384 (1152)
.+|.|||+||... .. .+.+++...+++|+.|+.++.+++.+ ...+.||++||.+.+-+..
T Consensus 102 ----~~d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~~~-------~~~~~~v~~SS~~~~~~~~~~~~ 165 (352)
T 1sb8_A 102 ----GVDYVLHQAALGS-VP----RSINDPITSNATNIDGFLNMLIAARD-------AKVQSFTYAASSSTYGDHPGLPK 165 (352)
T ss_dssp ----TCSEEEECCSCCC-HH----HHHHCHHHHHHHHTHHHHHHHHHHHH-------TTCSEEEEEEEGGGGTTCCCSSB
T ss_pred ----CCCEEEECCcccC-ch----hhhhCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEeccHHhcCCCCCCCC
Confidence 6999999999754 11 13466888999999999999998643 2456899999987654433
Q ss_pred -------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 385 -------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 -------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+.+|.+.+.+++..+.+. +.+++.+..+.+-+
T Consensus 166 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----g~~~~ilRp~~v~G 209 (352)
T 1sb8_A 166 VEDTIGKPLSPYAVTKYVNELYADVFSRCY-----GFSTIGLRYFNVFG 209 (352)
T ss_dssp CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH-----CCCCEEEEECCEEC
T ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc-----CCCEEEEEECceeC
Confidence 25789999999999998775431 23666666655543
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.2e-12 Score=137.23 Aligned_cols=188 Identities=11% Similarity=-0.011 Sum_probs=128.9
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
.+|||||+|+||+++++.|+++|. .|+++.|++.. ...+. ...+.++.+|++|.++ +.++.+|.|
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~~~~~--~~~~~~~~~D~~d~~~---------~~~~~~d~v 66 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQK---AADRL--GATVATLVKEPLVLTE---------ADLDSVDAV 66 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHHT--CTTSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccc---ccccc--CCCceEEecccccccH---------hhcccCCEE
Confidence 489999999999999999999987 55556666422 12222 3457889999999877 234579999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC------------
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG------------ 385 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g------------ 385 (1152)
|||||... ... ....|+.++.++.++ ..... ..||++||.++..+..+
T Consensus 67 i~~ag~~~-~~~-----------~~~~n~~~~~~l~~a-------~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~ 126 (224)
T 3h2s_A 67 VDALSVPW-GSG-----------RGYLHLDFATHLVSL-------LRNSD-TLAVFILGSASLAMPGADHPMILDFPESA 126 (224)
T ss_dssp EECCCCCT-TSS-----------CTHHHHHHHHHHHHT-------CTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGG
T ss_pred EECCccCC-Ccc-----------hhhHHHHHHHHHHHH-------HHHcC-CcEEEEecceeeccCCCCccccccCCCCC
Confidence 99999863 111 124688888888777 34444 78999999988877665
Q ss_pred --ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCCCCCCHHHHHHHHHHHH
Q psy616 386 --SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 386 --~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~~~l~~~e~~~~l~~~l 462 (1152)
...|+.+|...+.+....+..+ .+++.|..+.+.+.+......... .......+...+.+++.++++..++
T Consensus 127 ~~~~~y~~sK~~~e~~~~~~~~~~------i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l 200 (224)
T 3h2s_A 127 ASQPWYDGALYQYYEYQFLQMNAN------VNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQL 200 (224)
T ss_dssp GGSTTHHHHHHHHHHHHHHTTCTT------SCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHhcCC------CcEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHh
Confidence 6789999999997654433343 478888877765433221100000 0011123345789999999999999
Q ss_pred hcCc
Q psy616 463 IQDK 466 (1152)
Q Consensus 463 ~~~~ 466 (1152)
..+.
T Consensus 201 ~~~~ 204 (224)
T 3h2s_A 201 EHPT 204 (224)
T ss_dssp HSCC
T ss_pred cCcc
Confidence 8764
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=4.5e-12 Score=146.32 Aligned_cols=242 Identities=16% Similarity=0.173 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
..|+.+++.+||++||+++++++ .|++|+...++. . + ..+.+++..+|++. |.+.|..+|+|
T Consensus 75 ~~La~~Aa~~aL~~agl~~~dId----~vi~~t~~~~~~--------~----p-~~a~~v~~~lGl~~~~~~~v~~aC~s 137 (359)
T 3h78_A 75 SALMVPAARQAIEAAGLLPEDID----LLLVNTLSPDHH--------D----P-SQACLIQPLLGLRHIPVLDIRAQASG 137 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCC----EEEEECSSCSSS--------B----S-CHHHHHHHHHTCCSCCEEEEECGGGH
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC----EEEEEeCCCCCC--------C----C-cHHHHHHHHcCCCCCcEEEECCHhHH
Confidence 56889999999999999998887 788887654321 1 1 25778999999974 89999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCC
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDG 877 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dg 877 (1152)
++.||..|+..|++|.++.+||+|++.+... +.++... ....+.+|+|++++||++-+. ++
T Consensus 138 ~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~-----------~~~~d~~-----~~t~~lfGDGAaA~vl~~~~~---~~ 198 (359)
T 3h78_A 138 LLYGLQMARGQILAGLARHVLVVCGEVLSKR-----------MDCSDRG-----RNLSILLGDGAGAVVVSAGES---LE 198 (359)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEECGGG-----------CCCSTTT-----HHHHTTBCEEEEEEEEECCSC---SS
T ss_pred HHHHHHHHHHHHHCCCcCEEEEEEEchhccc-----------CCccccc-----ccccceecceeEEEEEEecCC---CC
Confidence 9999999999999999999999999974221 1111100 113467899999999987432 13
Q ss_pred CceEEEEEEEEEecCCCC-------------CC------------CCCCC--------HHHHHHHHHHHHHHcCCCCCCc
Q psy616 878 DPIHAIIRGSGINYDGKT-------------NG------------ITAPN--------GISQTELIKSVYKKSNLNPEDI 924 (1152)
Q Consensus 878 d~i~avI~g~a~~~dG~~-------------~~------------~~~P~--------~~~q~~~i~~al~~Agi~p~dI 924 (1152)
..|.+...+ +||.. .. +..-+ .....++++++|+++|++++||
T Consensus 199 ~~i~~~~~~----s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~~di 274 (359)
T 3h78_A 199 DGLLDLRLG----ADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDI 274 (359)
T ss_dssp SEEEEEEEE----ECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred CceEEEEEE----EccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 445433322 22210 00 00001 1234567899999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcc
Q psy616 925 NYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 1004 (1152)
Q Consensus 925 ~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~ 1004 (1152)
+++-.|-.+... ++++.+.++-...+ +.. . -...||+.+|+=...|-.++- . +.
T Consensus 275 d~~v~Hq~n~~i-----~~~~~~~lgl~~ek---~~~-~-l~~~GNt~sAsi~l~L~~~~~---~--l~----------- 328 (359)
T 3h78_A 275 DHVICHQPNLRI-----LDAVQEQLGIPQHK---FAV-T-VDRLGNMASASTPVTLAMFWP---D--IQ----------- 328 (359)
T ss_dssp SEEEECCSCHHH-----HHHHHHHHTCCGGG---BCC-C-HHHHCBCGGGHHHHHHHHHGG---G--SC-----------
T ss_pred CEEEECCCCHHH-----HHHHHHHhCcCHHH---hhh-h-hhcccchHHHHHHHHHHHHHH---h--CC-----------
Confidence 999999776543 45566666532211 222 2 236699999886666544321 1 10
Q ss_pred cccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1005 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1005 i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+-.+.++.+||.|-+-+.++|+
T Consensus 329 ----------------------~Gd~vll~~fG~G~t~~~~ll~ 350 (359)
T 3h78_A 329 ----------------------PGQRVLVLTYGSGATWGAALYR 350 (359)
T ss_dssp ----------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------------CCCEEEEEEEchhhhheeeeEE
Confidence 0123567889999999999997
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=8.4e-12 Score=146.51 Aligned_cols=175 Identities=11% Similarity=0.059 Sum_probs=122.5
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchH-----------------HHHHHH-HhCCCcEEEEEecC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS-----------------IIYKKL-KKFNNKAIYIQVDV 294 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~-----------------~~~~~l-~~~g~~v~~~~~Dv 294 (1152)
...+..+|||||+|.||.++++.|+++|.. |+++.|..... +....+ ...+.++.++.+|+
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl 86 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYE-VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI 86 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCe-EEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence 456789999999999999999999999875 44444432111 111111 12245688899999
Q ss_pred CCHHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEe
Q psy616 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYF 374 (1152)
Q Consensus 295 sd~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~ 374 (1152)
+|.+++.++++.. ++|.|||+||... . .....+.+++...+++|+.|+.++.+++.+. .....||++
T Consensus 87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~-~-~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~------~~~~~~V~~ 153 (404)
T 1i24_A 87 CDFEFLAESFKSF-----EPDSVVHFGEQRS-A-PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF------GEECHLVKL 153 (404)
T ss_dssp TSHHHHHHHHHHH-----CCSEEEECCSCCC-H-HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH------CTTCEEEEE
T ss_pred CCHHHHHHHHhcc-----CCCEEEECCCCCC-c-cchhhCccchhhhHHHHHHHHHHHHHHHHHh------CCCcEEEEe
Confidence 9999999888765 6999999999754 2 2223467788899999999999999997542 111479999
Q ss_pred cCCcccc------------------------CCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 375 SSSSAIL------------------------GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 375 SS~a~~~------------------------g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
||.+.+- +......|+.+|.+.+.+++....+. +.+++.|..+..-+
T Consensus 154 SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----gi~~~ivrp~~v~G 224 (404)
T 1i24_A 154 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-----GIRATDLNQGVVYG 224 (404)
T ss_dssp CCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECEEEC
T ss_pred CcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc-----CCeEEEEecceeeC
Confidence 9975431 11235689999999999988765431 23777777765543
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=5.7e-12 Score=145.08 Aligned_cols=166 Identities=20% Similarity=0.226 Sum_probs=122.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCC-----CcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFN-----NKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g-----~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
.++++|||||+|.||..+++.|+++|..++++.++..........+.... .++.++.+|++|.+++.++++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 99 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---- 99 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT----
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc----
Confidence 46899999999999999999999999755555544444444445554432 568999999999988877664
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC----
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG---- 385 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g---- 385 (1152)
.+|.|||+||... . ..+.+++...+++|+.|+.++.+++.. .....||++||.+.+-...+
T Consensus 100 ---~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~~~-------~~~~~~v~~SS~~vyg~~~~~~~~ 164 (351)
T 3ruf_A 100 ---GVDHVLHQAALGS-V----PRSIVDPITTNATNITGFLNILHAAKN-------AQVQSFTYAASSSTYGDHPALPKV 164 (351)
T ss_dssp ---TCSEEEECCCCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHH-------TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred ---CCCEEEECCccCC-c----chhhhCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEEecHHhcCCCCCCCCc
Confidence 6999999999754 1 223456778899999999999998642 24568999999865533322
Q ss_pred -------ChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCccc
Q psy616 386 -------SCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 386 -------~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 425 (1152)
...|+.+|...+.+++....+ ++ +++.+..+..-
T Consensus 165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~------~~~ilRp~~v~ 206 (351)
T 3ruf_A 165 EENIGNPLSPYAVTKYVNEIYAQVYARTYGF------KTIGLRYFNVF 206 (351)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CCEEEEECSEE
T ss_pred cCCCCCCCChhHHHHHHHHHHHHHHHHHhCC------CEEEEeeCcee
Confidence 468999999999998876554 33 55566555443
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-12 Score=142.41 Aligned_cols=182 Identities=19% Similarity=0.224 Sum_probs=133.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++|||||+|+||.++++.|+++|. .|+++.|+.... ....+.++.+|++|.+++.++++ .+|.
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 66 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAH-EVRLSDIVDLGA--------AEAHEEIVACDLADAQAVHDLVK-------DCDG 66 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEE-EEEECCSSCCCC--------CCTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCC-EEEEEeCCCccc--------cCCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence 5799999999999999999999985 677777764321 11347889999999988887764 4899
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------ 384 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------------ 384 (1152)
||||||... .++++..+++|+.|+.++.+++.+ ...+.||++||....-+.+
T Consensus 67 vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~-------~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~ 130 (267)
T 3ay3_A 67 IIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARN-------LGKPRIVFASSNHTIGYYPRTTRIDTEVPRR 130 (267)
T ss_dssp EEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHH-------TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCC
T ss_pred EEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHH-------hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCC
Confidence 999999752 124678899999999999998643 2456899999987654333
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
....|+.+|.+++.+++..... .+.+++.+.++.+-+..+ .. .. ....+.+++..+++..++..
T Consensus 131 ~~~~Y~~sK~~~e~~~~~~~~~-----~gi~~~~lrp~~v~~~~~----~~--~~-----~~~~~~~~dva~~~~~~~~~ 194 (267)
T 3ay3_A 131 PDSLYGLSKCFGEDLASLYYHK-----FDIETLNIRIGSCFPKPK----DA--RM-----MATWLSVDDFMRLMKRAFVA 194 (267)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHT-----TCCCEEEEEECBCSSSCC----SH--HH-----HHHBCCHHHHHHHHHHHHHS
T ss_pred CCChHHHHHHHHHHHHHHHHHH-----cCCCEEEEeceeecCCCC----CC--Ce-----eeccccHHHHHHHHHHHHhC
Confidence 2478999999999999876532 234777777766532211 00 11 11358899999999988876
Q ss_pred Cc
Q psy616 465 DK 466 (1152)
Q Consensus 465 ~~ 466 (1152)
+.
T Consensus 195 ~~ 196 (267)
T 3ay3_A 195 PK 196 (267)
T ss_dssp SC
T ss_pred CC
Confidence 54
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=5.2e-12 Score=144.31 Aligned_cols=155 Identities=14% Similarity=0.060 Sum_probs=111.1
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch--HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN--SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~--~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+++++|||||+|+||.++++.|+++|.. |+++.|+... ....+.+. .+..+.++.+|++|.+++.++++.+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~---- 85 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYR-VHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA---- 85 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc----
Confidence 46789999999999999999999999875 4444554321 11222221 2346889999999999999888765
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG------ 385 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g------ 385 (1152)
++|.|||+||... .. .+.+++...+++|+.|+.++.+++.+. .....||++||.+.+-+..+
T Consensus 86 -~~d~Vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~~~v~~SS~~v~g~~~~~~~~E~ 153 (335)
T 1rpn_A 86 -QPQEVYNLAAQSF-VG----ASWNQPVTTGVVDGLGVTHLLEAIRQF------SPETRFYQASTSEMFGLIQAERQDEN 153 (335)
T ss_dssp -CCSEEEECCSCCC-HH----HHTTSHHHHHHHHTHHHHHHHHHHHHH------CTTSEEEEEEEGGGGCSCSSSSBCTT
T ss_pred -CCCEEEECccccc-hh----hhhhChHHHHHHHHHHHHHHHHHHHHh------CCCCeEEEEeCHHHhCCCCCCCCCcc
Confidence 6899999999654 11 112346788999999999999987542 11267999999765432222
Q ss_pred -----ChhhhHHHHHHHHHHHHHHhc
Q psy616 386 -----SCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 386 -----~~~Yaaana~l~~la~~~~~~ 406 (1152)
...|+.+|.+.+.+++....+
T Consensus 154 ~~~~p~~~Y~~sK~~~e~~~~~~~~~ 179 (335)
T 1rpn_A 154 TPFYPRSPYGVAKLYGHWITVNYRES 179 (335)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 458999999999999877654
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=3.9e-12 Score=145.70 Aligned_cols=163 Identities=15% Similarity=0.257 Sum_probs=114.4
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
++|||||+|+||.++++.|+++|..++++..+........+.++.. +.++.++.+|++|++++.++++. + ++|+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~-~~D~ 76 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD----H-AIDT 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH----T-TCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc----c-CCCE
Confidence 5899999999999999999999986555543222111222333322 45678899999999998888765 2 6999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC------------CC
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------DF 384 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g------------~~ 384 (1152)
||||||... ... ..++....+++|+.|+.++.+++.. . ..+.||++||.+.+-. .+
T Consensus 77 vih~A~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~---~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~ 144 (338)
T 1udb_A 77 VIHFAGLKA-VGE----SVQKPLEYYDNNVNGTLRLISAMRA----A---NVKNFIFSSSATVYGDNPKIPYVESFPTGT 144 (338)
T ss_dssp EEECCSCCC-HHH----HHHCHHHHHHHHHHHHHHHHHHHHH----H---TCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred EEECCccCc-ccc----chhcHHHHHHHHHHHHHHHHHHHHh----c---CCCeEEEEccHHHhCCCCCCCcCcccCCCC
Confidence 999999754 211 2344567899999999999987432 1 3467999999764311 12
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeC
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINW 421 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~w 421 (1152)
+...|+++|.+++.+++....+.. +.+++.+..
T Consensus 145 ~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~ilR~ 177 (338)
T 1udb_A 145 PQSPYGKSKLMVEQILTDLQKAQP----DWSIALLRY 177 (338)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHST----TCEEEEEEE
T ss_pred CCChHHHHHHHHHHHHHHHHHhcC----CCceEEEee
Confidence 367899999999999988765421 235555543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=6.7e-12 Score=134.68 Aligned_cols=180 Identities=11% Similarity=0.036 Sum_probs=123.1
Q ss_pred CEEEEECCchhHHHHHHHHHH-HcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLI-NKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La-~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||+||||+++++.|+ ++|+ +|+++.|++.. ..+++...+.++.++.+|++|++++.++++ .+|
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d 75 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKT--RIPPEIIDHERVTVIEGSFQNPGXLEQAVT-------NAE 75 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHH--HSCHHHHTSTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccc--cchhhccCCCceEEEECCCCCHHHHHHHHc-------CCC
Confidence 679999999999999999999 7887 56666666320 222333346679999999999999888774 589
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh--------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC-------- 387 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~-------- 387 (1152)
.||||||.. |+. .+.+++.|++ ...+.||++||..+..+.++..
T Consensus 76 ~vv~~ag~~--------------------n~~-----~~~~~~~~~~---~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~ 127 (221)
T 3r6d_A 76 VVFVGAMES--------------------GSD-----MASIVKALSR---XNIRRVIGVSMAGLSGEFPVALEKWTFDNL 127 (221)
T ss_dssp EEEESCCCC--------------------HHH-----HHHHHHHHHH---TTCCEEEEEEETTTTSCSCHHHHHHHHHTS
T ss_pred EEEEcCCCC--------------------Chh-----HHHHHHHHHh---cCCCeEEEEeeceecCCCCccccccccccc
Confidence 999999852 111 4455555543 3456899999998877666655
Q ss_pred --hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHH--h
Q psy616 388 --DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLL--I 463 (1152)
Q Consensus 388 --~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l--~ 463 (1152)
.|+++|..++.+.+ ..++ +++.|.+|...+..+......... .....-.++++++..+++..++ .
T Consensus 128 ~~~y~~~K~~~e~~~~---~~~i------~~~~vrpg~v~~~~~~~~~~~~~~--~~~~~~~~~~~~dvA~~~~~l~~~~ 196 (221)
T 3r6d_A 128 PISYVQGERQARNVLR---ESNL------NYTILRLTWLYNDPEXTDYELIPE--GAQFNDAQVSREAVVKAIFDILHAA 196 (221)
T ss_dssp CHHHHHHHHHHHHHHH---HSCS------EEEEEEECEEECCTTCCCCEEECT--TSCCCCCEEEHHHHHHHHHHHHTCS
T ss_pred ccHHHHHHHHHHHHHH---hCCC------CEEEEechhhcCCCCCcceeeccC--CccCCCceeeHHHHHHHHHHHHHhc
Confidence 89999999988775 3343 788888776654312111100000 0011122678899999999988 5
Q ss_pred cC
Q psy616 464 QD 465 (1152)
Q Consensus 464 ~~ 465 (1152)
.+
T Consensus 197 ~~ 198 (221)
T 3r6d_A 197 DE 198 (221)
T ss_dssp CC
T ss_pred Ch
Confidence 54
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.36 E-value=4.9e-11 Score=138.01 Aligned_cols=247 Identities=11% Similarity=0.077 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaC 795 (1152)
...|+.+++.+||++||+++++++ .|++|+...++. . + ..+.+++..+|+. .|++.|..+|
T Consensus 80 ~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~~~~~~--------~----p-~~a~~v~~~lGl~~~~~~~~v~~~C 142 (365)
T 3gwa_A 80 AADLAYEAARKLFAQGAVGADQVD----FVILCTQAPDYV--------L----P-TSACMLQHRLGIPTHAGALDVNLGC 142 (365)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGCC----EEEEEESSCSCS--------B----S-CHHHHHHHHTTCCTTSEEEEEECST
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC--------C----C-cHHHHHHHHcCCCCCceEEEecccC
Confidence 457889999999999999998887 788887654321 1 1 2577899999997 7999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhc
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 875 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~ 875 (1152)
+|++.||..|++.|++|.++.+||+|++.+... +.++. ......+|+|++++||++-+..
T Consensus 143 ~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~~~~d-------r~~~~lfGDGAaA~vl~~~~~~-- 202 (365)
T 3gwa_A 143 SGYVYGLSLAKGLVETGAARCVLLLTADTYSKY-----------LHPLD-------KSVRTLFGDGASATAVIAEHGE-- 202 (365)
T ss_dssp THHHHHHHHHHHHHHTTSCSEEEEEEEECGGGG-----------SCTTC-------HHHHTTBCCEEEEEEEEEECSS--
T ss_pred hHHHHHHHHHHHHHHcCCCCEEEEEEEchhhcc-----------CCccc-------ccccccccceeEEEEEEecCCC--
Confidence 999999999999999999999999999984321 11111 1124679999999999875421
Q ss_pred CCCceEEEEEEEE--------EecCCCCCCCC--------------------CCC--------HHHHHHHHHHHHHHcCC
Q psy616 876 DGDPIHAIIRGSG--------INYDGKTNGIT--------------------APN--------GISQTELIKSVYKKSNL 919 (1152)
Q Consensus 876 dgd~i~avI~g~a--------~~~dG~~~~~~--------------------~P~--------~~~q~~~i~~al~~Agi 919 (1152)
...|.....++. +..+|.....+ .-+ .....++++++|+++|+
T Consensus 203 -~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl 281 (365)
T 3gwa_A 203 -LERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGE 281 (365)
T ss_dssp -SCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -CCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 112433322211 00111110000 001 23345778999999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCC
Q psy616 920 NPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 999 (1152)
Q Consensus 920 ~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~ 999 (1152)
+++||+++-.|-.+... ++++.+.++-...+ +. ..-...||+-+|+=...|-.. ++.|.+.|
T Consensus 282 ~~~did~~v~Hq~n~~i-----~~~~~~~Lgl~~ek---~~--~~l~~~GNtssAsipl~L~~~---~~~g~~~~----- 343 (365)
T 3gwa_A 282 PRENIDCFVLHQANRFM-----LDALRKKMKIPEHK---FP--VLMEHCGNTVSSTLPLALETM---RANGTLAR----- 343 (365)
T ss_dssp CGGGCSEEEECCCCHHH-----HHHHHHHHTCCGGG---SC--CCCTTTCBCGGGHHHHHHHHH---HHTTCCCT-----
T ss_pred CHHHCCEEEEcCCCHHH-----HHHHHHHhCCCHHH---HH--HHHhcccchHHHHHHHHHHHH---HHcCCCCC-----
Confidence 99999999999766543 45566666532211 12 233578999988765554332 33332211
Q ss_pred CCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1000 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1000 ~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
-.+.+..+||.|-+-+.++|+
T Consensus 344 ----------------------------Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 344 ----------------------------GMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp ----------------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------------------CCEEEEEEEehhheeEEEEEE
Confidence 124568889999999998885
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.36 E-value=7.7e-12 Score=143.27 Aligned_cols=196 Identities=13% Similarity=0.091 Sum_probs=126.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
.++|||||+|+||.++++.|+++|.. |+++.|+.... +.+.. ..+.++.+|++|.+++.++++ .+|.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~---~~l~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 80 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHD-LVLIHRPSSQI---QRLAY--LEPECRVAEMLDHAGLERALR-------GLDG 80 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECTTSCG---GGGGG--GCCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCE-EEEEecChHhh---hhhcc--CCeEEEEecCCCHHHHHHHHc-------CCCE
Confidence 47999999999999999999999875 44445543211 11222 246788999999988877654 5899
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-----------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG----------- 385 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g----------- 385 (1152)
|||+||... .+.+++...+++|+.|+.++.+++.+. ..+.||++||.+.+-+..+
T Consensus 81 vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~-------~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~ 146 (342)
T 2x4g_A 81 VIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA-------RVPRILYVGSAYAMPRHPQGLPGHEGLFYD 146 (342)
T ss_dssp EEEC-------------------CHHHHHHHHHHHHHHHHHHH-------TCSCEEEECCGGGSCCCTTSSCBCTTCCCS
T ss_pred EEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc-------CCCeEEEECCHHhhCcCCCCCCCCCCCCCC
Confidence 999999643 134567889999999999999997642 3467999999877654444
Q ss_pred -----ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccc-cccccccchhHHhhc-------CCCCCCHH
Q psy616 386 -----SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF-KIGNNEQTDFYFKSS-------KQKVLHEN 452 (1152)
Q Consensus 386 -----~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm-~~~~~~~~~~~~~~~-------g~~~l~~~ 452 (1152)
...|+.+|...+.+++.....++ +++.+..+..-+.+. ............... ....+..+
T Consensus 147 p~~~~~~~Y~~sK~~~e~~~~~~~~~g~------~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 220 (342)
T 2x4g_A 147 SLPSGKSSYVLCKWALDEQAREQARNGL------PVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAA 220 (342)
T ss_dssp SCCTTSCHHHHHHHHHHHHHHHHHHTTC------CEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHH
T ss_pred ccccccChHHHHHHHHHHHHHHHhhcCC------cEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHH
Confidence 67899999999999987764344 677777665543332 100000001111110 01245678
Q ss_pred HHHHHHHHHHhcC
Q psy616 453 DGLKLFEQLLIQD 465 (1152)
Q Consensus 453 e~~~~l~~~l~~~ 465 (1152)
+..+++..++..+
T Consensus 221 Dva~~~~~~~~~~ 233 (342)
T 2x4g_A 221 EAGRGLLMALERG 233 (342)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCC
Confidence 8888887777654
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=3.8e-12 Score=147.09 Aligned_cols=172 Identities=17% Similarity=0.141 Sum_probs=122.3
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc---chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK---LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~---~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+|||||+|+||.++++.|++++...|+++.|+. ..+. .+.+.. +.++.++.+|++|.+++.+++++ +++
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 74 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-LSDISE-SNRYNFEHADICDSAEITRIFEQ-----YQP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG-GTTTTT-CTTEEEEECCTTCHHHHHHHHHH-----HCC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh-hhhhhc-CCCeEEEECCCCCHHHHHHHHhh-----cCC
Confidence 4899999999999999999998433566556543 1111 112211 45788999999999999988875 279
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhc--CCCCCEEEEecCCccc--cC--------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQ--KNKLDFVCYFSSSSAI--LG-------- 382 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~--~~~~~~iV~~SS~a~~--~g-------- 382 (1152)
|+||||||... . +.+.++++..+++|+.|+.++.+++.+.|...+ ....+.||++||.+.+ .+
T Consensus 75 d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 149 (361)
T 1kew_A 75 DAVMHLAAESH-V----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp SEEEECCSCCC-H----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred CEEEECCCCcC-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence 99999999754 1 234566788999999999999999988753211 0012379999997532 11
Q ss_pred -----------CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 383 -----------DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 383 -----------~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
......|+++|.+++.+++..+.+. +.+++.+..+...+
T Consensus 150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----gi~~~~vrp~~v~G 199 (361)
T 1kew_A 150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY-----GLPTIVTNCSNNYG 199 (361)
T ss_dssp SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECEEES
T ss_pred ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-----CCcEEEEeeceeEC
Confidence 2346789999999999998876541 23777777665543
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=6e-12 Score=146.05 Aligned_cols=155 Identities=17% Similarity=0.124 Sum_probs=110.8
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch--HHHHHHHHh----CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN--SIIYKKLKK----FNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~--~~~~~~l~~----~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
+++|||||+|+||.++++.|+++|. .|+++.|+... .+..+.+.. .+.++.++.+|++|.+++.++++.+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--- 77 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence 6799999999999999999999987 56666665322 111222211 2457889999999999999888765
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-------
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------- 383 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~------- 383 (1152)
++|.||||||... . ..+.+++...+++|+.|+.++.+++.+.+ ......||++||.+.+-+.
T Consensus 78 --~~d~vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~~iv~~SS~~v~g~~~~~~~~E 146 (372)
T 1db3_A 78 --QPDEVYNLGAMSH-V----AVSFESPEYTADVDAMGTLRLLEAIRFLG----LEKKTRFYQASTSELYGLVQEIPQKE 146 (372)
T ss_dssp --CCSEEEECCCCCT-T----TTTTSCHHHHHHHHTHHHHHHHHHHHHTT----CTTTCEEEEEEEGGGGTTCCSSSBCT
T ss_pred --CCCEEEECCcccC-c----cccccCHHHHHHHHHHHHHHHHHHHHHhC----CCCCcEEEEeCChhhhCCCCCCCCCc
Confidence 6899999999754 2 22345677899999999999999976531 1012689999997654221
Q ss_pred ----CCChhhhHHHHHHHHHHHHHHhc
Q psy616 384 ----FGSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 384 ----~g~~~Yaaana~l~~la~~~~~~ 406 (1152)
.....|+.+|.+++.+++..+.+
T Consensus 147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 173 (372)
T 1db3_A 147 TTPFYPRSPYAVAKLYAYWITVNYRES 173 (372)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 23678999999999999887654
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.7e-12 Score=144.80 Aligned_cols=167 Identities=19% Similarity=0.166 Sum_probs=120.8
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcC-CcEEEEecCCcc--hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKL--NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~G-a~~vil~~R~~~--~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+.++|||||+|+||.++++.|+++| ...|+++.|... ..+..+.+. .+.++.++.+|++|.+++.+++ +
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~-------~ 74 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLE-DDPRYTFVKGDVADYELVKELV-------R 74 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHH-------H
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhc-cCCceEEEEcCCCCHHHHHHHh-------h
Confidence 3579999999999999999999997 246666666431 111111121 1457889999999999888776 3
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-----------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL----------- 381 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~----------- 381 (1152)
++|.|||+||... . +.+.++++..+++|+.|+.++.+++.+. ...+.||++||.+.+-
T Consensus 75 ~~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~------~~~~~iv~~SS~~vyg~~~~~~~~E~~ 143 (336)
T 2hun_A 75 KVDGVVHLAAESH-V----DRSISSPEIFLHSNVIGTYTLLESIRRE------NPEVRFVHVSTDEVYGDILKGSFTEND 143 (336)
T ss_dssp TCSEEEECCCCCC-H----HHHHHCTHHHHHHHHHHHHHHHHHHHHH------CTTSEEEEEEEGGGGCCCSSSCBCTTB
T ss_pred CCCEEEECCCCcC-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHh------CCCcEEEEeccHHHHCCCCCCCcCCCC
Confidence 6999999999754 1 2244567889999999999999997653 1235899999975321
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 382 GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 382 g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
+......|+++|.+.+.+++..+.+. +.+++.+..+...+
T Consensus 144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~v~g 183 (336)
T 2hun_A 144 RLMPSSPYSATKAASDMLVLGWTRTY-----NLNASITRCTNNYG 183 (336)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHT-----TCEEEEEEECEEES
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHh-----CCCEEEEeeeeeeC
Confidence 22346789999999999998876541 34777777765543
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.33 E-value=8.9e-12 Score=133.24 Aligned_cols=186 Identities=13% Similarity=0.064 Sum_probs=118.9
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
.+|||||+|+||+++++.|+++|. .|+++.|++.. ...+. ..+.++.+|++|.++ +.++.+|.|
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~~~~~---~~~~~~~~D~~d~~~---------~~~~~~d~v 65 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGK---ITQTH---KDINILQKDIFDLTL---------SDLSDQNVV 65 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHH---HHHHC---SSSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchh---hhhcc---CCCeEEeccccChhh---------hhhcCCCEE
Confidence 589999999999999999999996 55556666422 12222 457889999999876 233579999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC------------
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG------------ 385 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g------------ 385 (1152)
|||||... . ....++.++.++.++ ........||++||..++.+.++
T Consensus 66 i~~ag~~~-~-------------~~~~~~~~~~~l~~a-------~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~ 124 (221)
T 3ew7_A 66 VDAYGISP-D-------------EAEKHVTSLDHLISV-------LNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLRE 124 (221)
T ss_dssp EECCCSST-T-------------TTTSHHHHHHHHHHH-------HCSCCSSEEEEECCCC-------------------
T ss_pred EECCcCCc-c-------------ccchHHHHHHHHHHH-------HHhcCCceEEEEecceEEEcCCCCccccccCCCCC
Confidence 99999854 2 134577777777777 34445678999999988776554
Q ss_pred ChhhhHHHHHHHHHHHHHH-hcccccCCCceEEEEeCCcccCccccccccc--cchhHHhhcCCCCCCHHHHHHHHHHHH
Q psy616 386 SCDYAMGNRFQTVYAKYLN-NKNIYKKYTNKLITINWPLWNNSKFKIGNNE--QTDFYFKSSKQKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~-~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~--~~~~~~~~~g~~~l~~~e~~~~l~~~l 462 (1152)
...|+.+|...+.+...+. ..+ .+++.|.++.+.+.+.....-. .........+..++..++.++++..++
T Consensus 125 ~~~y~~~k~~~e~~~~~~~~~~g------i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 198 (221)
T 3ew7_A 125 APYYPTARAQAKQLEHLKSHQAE------FSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEI 198 (221)
T ss_dssp CCCSCCHHHHHHHHHHHHTTTTT------SCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhccC------ccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHH
Confidence 3559999999998854333 343 4888888887754322111000 000111123345789999999999999
Q ss_pred hcCc
Q psy616 463 IQDK 466 (1152)
Q Consensus 463 ~~~~ 466 (1152)
..+.
T Consensus 199 ~~~~ 202 (221)
T 3ew7_A 199 ERPN 202 (221)
T ss_dssp HSCS
T ss_pred hCcc
Confidence 8764
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.33 E-value=5.9e-12 Score=144.41 Aligned_cols=153 Identities=17% Similarity=0.113 Sum_probs=115.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCC------cEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYS------TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga------~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
.++++|||||+|+||.++++.|+++|. ..|+++.|+..... ...+.++.++.+|++|.+++.++++
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~--- 84 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-----AGFSGAVDARAADLSAPGEAEKLVE--- 84 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC-----TTCCSEEEEEECCTTSTTHHHHHHH---
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc-----cccCCceeEEEcCCCCHHHHHHHHh---
Confidence 467899999999999999999999983 45666666532110 0134578899999999998887775
Q ss_pred hhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-C---
Q psy616 309 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-F--- 384 (1152)
Q Consensus 309 ~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-~--- 384 (1152)
+++|.|||+||... . .+.+++...+++|+.|+.++.+++.+...+ ......||++||.+.+-+. +
T Consensus 85 ---~~~d~vih~A~~~~-~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~--~~~~~~iv~~SS~~~~~~~~~~~~ 153 (342)
T 2hrz_A 85 ---ARPDVIFHLAAIVS-G-----EAELDFDKGYRINLDGTRYLFDAIRIANGK--DGYKPRVVFTSSIAVFGAPLPYPI 153 (342)
T ss_dssp ---TCCSEEEECCCCCH-H-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHH--HCCCCEEEEEEEGGGCCSSCCSSB
T ss_pred ---cCCCEEEECCccCc-c-----cccccHHHHHHHHHHHHHHHHHHHHhcccc--cCCCcEEEEeCchHhhCCCCCCCc
Confidence 47999999999754 1 245678899999999999999987654211 0124679999998654322 1
Q ss_pred -------CChhhhHHHHHHHHHHHHHHhc
Q psy616 385 -------GSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 385 -------g~~~Yaaana~l~~la~~~~~~ 406 (1152)
....|+++|.+.+.+++....+
T Consensus 154 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 182 (342)
T 2hrz_A 154 PDEFHTTPLTSYGTQKAICELLLSDYSRR 182 (342)
T ss_dssp CTTCCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 5678999999999999887654
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.4e-12 Score=149.00 Aligned_cols=160 Identities=18% Similarity=0.182 Sum_probs=112.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHH--cCCcEEEEecCCcchHHHH--------HHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLIN--KYSTNLILSGRSKLNSIIY--------KKLKKFNNKAIYIQVDVSDKLKMISEI 304 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~--~Ga~~vil~~R~~~~~~~~--------~~l~~~g~~v~~~~~Dvsd~~~v~~~~ 304 (1152)
.++++|||||+|+||.++++.|++ +|..+++ +.|+....... ......+..+.++.+|++|.++++++
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~- 86 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVV-LDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL- 86 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEE-EECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEE-EECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-
Confidence 468999999999999999999999 7775444 45543211100 00112244678999999999988776
Q ss_pred HHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC
Q psy616 305 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 384 (1152)
Q Consensus 305 ~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~ 384 (1152)
....+|.||||||... . +.++++..+++|+.|+.++.+++.. .... ||++||.+ .+|..
T Consensus 87 -----~~~~~D~vih~A~~~~-~------~~~~~~~~~~~Nv~gt~~ll~aa~~-------~~~~-~V~~SS~~-vyg~~ 145 (362)
T 3sxp_A 87 -----EKLHFDYLFHQAAVSD-T------TMLNQELVMKTNYQAFLNLLEIARS-------KKAK-VIYASSAG-VYGNT 145 (362)
T ss_dssp -----TTSCCSEEEECCCCCG-G------GCCCHHHHHHHHTHHHHHHHHHHHH-------TTCE-EEEEEEGG-GGCSC
T ss_pred -----hccCCCEEEECCccCC-c------cccCHHHHHHHHHHHHHHHHHHHHH-------cCCc-EEEeCcHH-HhCCC
Confidence 3458999999999654 2 3346788999999999999999632 2333 99999944 44433
Q ss_pred C-----------ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 385 G-----------SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 g-----------~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
. ...|+.+|.+.+.+++....+ + +++.|..+..
T Consensus 146 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~------~~~~lR~~~v 189 (362)
T 3sxp_A 146 KAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-N------VQVGLRYFNV 189 (362)
T ss_dssp CSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-S------CEEEEEECSE
T ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-C------CEEEEEeCce
Confidence 2 345999999999999877654 2 4555555433
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-11 Score=144.25 Aligned_cols=155 Identities=15% Similarity=0.103 Sum_probs=111.6
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch------HHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN------SIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~------~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
+++|||||+|+||.++++.|+++|..+ +++.|+... +.+.+.+.. .+.++.++.+|++|.+++.++++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEV-HGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE-EEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEE-EEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc--
Confidence 689999999999999999999999754 444554221 111111110 2346889999999999999888765
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC------
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------ 383 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~------ 383 (1152)
++|.||||||... . ..+.++++..+++|+.|+.++.+++.+.. ....+.||++||.+.+-+.
T Consensus 102 ---~~d~vih~A~~~~-~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~ 169 (375)
T 1t2a_A 102 ---KPTEIYNLGAQSH-V----KISFDLAEYTADVDGVGTLRLLDAVKTCG----LINSVKFYQASTSELYGKVQEIPQK 169 (375)
T ss_dssp ---CCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHHTT----CTTTCEEEEEEEGGGTCSCSSSSBC
T ss_pred ---CCCEEEECCCccc-c----cccccCHHHHHHHHHHHHHHHHHHHHHhC----CCccceEEEecchhhhCCCCCCCCC
Confidence 6899999999754 1 12356688899999999999999975431 1112689999997764321
Q ss_pred -----CCChhhhHHHHHHHHHHHHHHhc
Q psy616 384 -----FGSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 384 -----~g~~~Yaaana~l~~la~~~~~~ 406 (1152)
.....|+.+|.+++.+++..+.+
T Consensus 170 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 197 (375)
T 1t2a_A 170 ETTPFYPRSPYGAAKLYAYWIVVNFREA 197 (375)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 23578999999999999887654
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.2e-12 Score=151.54 Aligned_cols=159 Identities=14% Similarity=0.140 Sum_probs=114.0
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchH----HHHHHHHh---------CCCcEEEEEecCCCHHHH
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS----IIYKKLKK---------FNNKAIYIQVDVSDKLKM 300 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~----~~~~~l~~---------~g~~v~~~~~Dvsd~~~v 300 (1152)
.+.+++|||||+|+||.++++.|+++|. .|+++.|++... .+.+.++. .+.++.++.+|++|++++
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCC-EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 3567999999999999999999988887 455555554422 22222222 246799999999998777
Q ss_pred HHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc
Q psy616 301 ISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI 380 (1152)
Q Consensus 301 ~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~ 380 (1152)
. .++.+|.||||||... . .+++...+++|+.|+.++.+++.+ ....||++||...
T Consensus 146 ~--------~~~~~d~Vih~A~~~~-~-------~~~~~~~~~~Nv~g~~~l~~aa~~--------~~~~~v~~SS~~~- 200 (427)
T 4f6c_A 146 V--------LPENMDTIIHAGARTD-H-------FGDDDEFEKVNVQGTVDVIRLAQQ--------HHARLIYVSTISV- 200 (427)
T ss_dssp C--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH--------TTCEEEEEEEGGG-
T ss_pred C--------CcCCCCEEEECCcccC-C-------CCCHHHHHHHHHHHHHHHHHHHHh--------cCCcEEEECchHh-
Confidence 6 5679999999999754 1 246788999999999999999643 3467999999887
Q ss_pred cCC--------------------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 381 LGD--------------------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 381 ~g~--------------------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
|. .....|+.+|...+.+++..+..++ +++.+..+..-
T Consensus 201 -G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~------~~~ivRpg~v~ 258 (427)
T 4f6c_A 201 -GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGL------DGRIVRVGNLT 258 (427)
T ss_dssp -GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTC------CEEEEEECCEE
T ss_pred -CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCC------CEEEEeCCeee
Confidence 22 2568999999999999988766554 77777765543
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-11 Score=142.82 Aligned_cols=242 Identities=15% Similarity=0.112 Sum_probs=164.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCcccccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTAC 795 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdtaC 795 (1152)
...|..+++.+||++||+++++++ .|++|+...++. . ...+.+++..+|+ +.|.+.|..+|
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id----~vi~~t~~~~~~--------~-----p~~a~~v~~~lGl~~~~~~~~v~~aC 128 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID----ALIFVSQTPNYR--------L-----PATAFVLQAELDLPASCLALDINLGC 128 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCS--------S-----SCHHHHHHHHTTCCTTSEEEEECCCT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC--------C-----CcHHHHHHHHcCcCCCccEEeeCccc
Confidence 356889999999999999998887 788887654321 1 1257889999999 47999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhc
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALS 875 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~ 875 (1152)
+|++.||..|++.|++|.++.+||+|++.+... +.++ .......+|+|++++||++.+..
T Consensus 129 ~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~~~~-------d~~~~~lfGDGA~A~vl~~~~~~-- 188 (354)
T 4efi_A 129 SGYPQALWLGMNLIQTGAAKRVLLAVGDTISKM-----------IDPT-------DRSTSLLFGDAGTMTALETSNGD-- 188 (354)
T ss_dssp THHHHHHHHHHHHHHTTSCSEEEEEEEECGGGG-----------CCTT-------CHHHHTTBCCEEEEEEEEECCSC--
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEechhccc-----------CCcc-------ccccccccccceeEEEEeecCCC--
Confidence 999999999999999999999999999974211 1111 11235679999999999874321
Q ss_pred CCCceEEEEEEEEEecCCCC--------CC------------------CCCCC--------HHHHHHHHHHHHHHcCCCC
Q psy616 876 DGDPIHAIIRGSGINYDGKT--------NG------------------ITAPN--------GISQTELIKSVYKKSNLNP 921 (1152)
Q Consensus 876 dgd~i~avI~g~a~~~dG~~--------~~------------------~~~P~--------~~~q~~~i~~al~~Agi~p 921 (1152)
.+. .+....+|.. .+ ...-+ .....++++++|+++|+++
T Consensus 189 ---~~~----~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~ 261 (354)
T 4efi_A 189 ---AAA----HFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDK 261 (354)
T ss_dssp ---CEE----EEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred ---Cce----EEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 122 2222233210 00 00011 1334567899999999999
Q ss_pred CCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCC
Q psy616 922 EDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE 1001 (1152)
Q Consensus 922 ~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~ 1001 (1152)
+||+++-.|-.+... ++++.+.++-...+ +. ..-..+||+.+|+=...|-.++ +.+.+.|
T Consensus 262 ~did~~v~Hq~~~~i-----~~~~~~~Lgl~~ek---~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~~~------- 321 (354)
T 4efi_A 262 DSYDAFLFHQANLFM-----LKHLAKKAGLPAER---VP--VNIGEYGNTSCASIPLLITTEL---KDRLKEE------- 321 (354)
T ss_dssp GGCSEEEECCCCHHH-----HHHHHHHTTCCGGG---SC--CCHHHHCBCGGGHHHHHHHHHS---HHHHHHS-------
T ss_pred HHCCEEEeCCCCHHH-----HHHHHHHhCcCHHH---HH--HHHhhhCcHHHHHHHHHHHHHH---HhCCCCC-------
Confidence 999999999766543 45566666432211 11 1236679999988666554432 2221111
Q ss_pred CcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 1002 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1002 np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
-.+.++.+||.|-+-+.++|+-
T Consensus 322 --------------------------Gd~vll~~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 322 --------------------------TLQLGMFGFGVGYSWASAALAV 343 (354)
T ss_dssp --------------------------CEEEEEEEEETTTEEEEEEEEE
T ss_pred --------------------------CCEEEEEEEchhhhheeeEEEE
Confidence 1345788999999999999974
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.9e-11 Score=145.36 Aligned_cols=181 Identities=14% Similarity=0.119 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC----CCCccccccc
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL----KGPVMAINTA 794 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l----~GPs~tvdta 794 (1152)
..+.++++.+||+++|+++++++ .|++|+....+. ....+..++..||+ ..|.+.|..+
T Consensus 53 ~~La~~Aa~~aL~~agi~~~~Id----~li~~t~t~~~~-------------~p~~a~~v~~~lgl~g~~~~~~~~v~~a 115 (450)
T 2f82_A 53 ISMSFNAVTSLLEKYKIDPKQIG----RLEVGSETVIDK-------------SKSIKTFLMQLFEKCGNTDVEGVDSTNA 115 (450)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEE----EEEEECCCCSCS-------------SSCHHHHHTHHHHTTTCCCCBCCEECSG
T ss_pred HHHHHHHHHHHHHHcCcCHHHCC----EEEEEecCCCCC-------------CCcHHHHHHHHhCCcCCCCceEEEhhhh
Confidence 47899999999999999876654 455676543221 12357778888888 4688999999
Q ss_pred chhHHHHHHHHHHHHHcCCC--CEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccch
Q psy616 795 CSSSLVATHIACQSLRQHEC--DTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 872 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~--d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~ 872 (1152)
|+|++.||..|.+.|++|.+ +.+||+|++.+. |+....+...|+|++++||.+.+.
T Consensus 116 C~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~----------------------~~~~~~~~~fGDGA~A~ll~~~~~ 173 (450)
T 2f82_A 116 CYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV----------------------YAEGPARPTGGAAAIAMLIGPDAP 173 (450)
T ss_dssp GGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC----------------------CSSSTTGGGCEEEEEEEEEESSCS
T ss_pred hHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc----------------------ccCCCCCcccccceEEEEeccCCc
Confidence 99999999999999999998 999999999742 112236788999999999986432
Q ss_pred hhcCCCceEEEEEEEEEec--CCCCC----CCCCCCHH--------HHHHHHHHHHH------HcCCCCCCccEEEecCC
Q psy616 873 ALSDGDPIHAIIRGSGINY--DGKTN----GITAPNGI--------SQTELIKSVYK------KSNLNPEDINYIITHGT 932 (1152)
Q Consensus 873 A~~dgd~i~avI~g~a~~~--dG~~~----~~~~P~~~--------~q~~~i~~al~------~Agi~p~dI~yve~hgt 932 (1152)
+ .+.....|+...+ |.... .+...++. ...++++++++ ++|++++||+|+-.|.+
T Consensus 174 ----~-~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~did~~v~Hq~ 248 (450)
T 2f82_A 174 ----I-VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSP 248 (450)
T ss_dssp ----E-EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGCSEEEECCS
T ss_pred ----e-EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhcCEEEecCC
Confidence 1 2232234544432 11111 11222332 34467788886 89999999999999999
Q ss_pred CCCCCCHHHHH
Q psy616 933 GTKLGDPVEIN 943 (1152)
Q Consensus 933 gT~~gD~~E~~ 943 (1152)
++++.+.+...
T Consensus 249 ~~~i~~~~~~~ 259 (450)
T 2f82_A 249 YNKLVQKSFAR 259 (450)
T ss_dssp SHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 99987766543
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.2e-11 Score=144.03 Aligned_cols=157 Identities=18% Similarity=0.117 Sum_probs=114.3
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc------hHHHHHHHHhCCC-cEEEEEecCCCHHHHHHHHHHHHh
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL------NSIIYKKLKKFNN-KAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~------~~~~~~~l~~~g~-~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
+++|||||+|+||.++++.|+++|.. |+++.|+.. .+.....+...+. .+.++.+|++|.+++.++++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYE-VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc--
Confidence 68999999999999999999999875 554555432 1111111211233 6889999999999999888765
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-------
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------- 382 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g------- 382 (1152)
++|.|||+||... . ..+.+++...+++|+.|+.++.+++.+...+. .....||++||.+.+-+
T Consensus 106 ---~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~E 175 (381)
T 1n7h_A 106 ---KPDEVYNLAAQSH-V----AVSFEIPDYTADVVATGALRLLEAVRSHTIDS--GRTVKYYQAGSSEMFGSTPPPQSE 175 (381)
T ss_dssp ---CCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH--CCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred ---CCCEEEECCcccC-c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCcc--CCccEEEEeCcHHHhCCCCCCCCC
Confidence 6899999999754 2 13456788899999999999999998865332 12347999999764321
Q ss_pred ---CCCChhhhHHHHHHHHHHHHHHhc
Q psy616 383 ---DFGSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 383 ---~~g~~~Yaaana~l~~la~~~~~~ 406 (1152)
......|+.+|.+.+.+++....+
T Consensus 176 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 202 (381)
T 1n7h_A 176 TTPFHPRSPYAASKCAAHWYTVNYREA 202 (381)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 234678999999999999877654
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.6e-11 Score=140.63 Aligned_cols=166 Identities=19% Similarity=0.168 Sum_probs=115.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC---CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF---NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~---g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++|||||+|+||.++++.|+++|..++++ .|+.........+... +.++.++.+|++|.+++.++++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRAT-VRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------ 76 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEE-ESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEE-ECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence 46789999999999999999999999854444 4543222112222222 1358889999999988877663
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 384 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------- 384 (1152)
.+|+|||+|+... . ...+ ..+..+++|+.|+.++.+++.+. ...+.||++||.+++.+..
T Consensus 77 -~~d~Vih~A~~~~-~---~~~~--~~~~~~~~nv~gt~~ll~a~~~~------~~~~riV~~SS~~~~~~~~~~~~~~~ 143 (337)
T 2c29_D 77 -GCTGVFHVATPMD-F---ESKD--PENEVIKPTIEGMLGIMKSCAAA------KTVRRLVFTSSAGTVNIQEHQLPVYD 143 (337)
T ss_dssp -TCSEEEECCCCCC-S---SCSS--HHHHTHHHHHHHHHHHHHHHHHH------SCCCEEEEECCGGGTSCSSSCCSEEC
T ss_pred -CCCEEEEeccccC-C---CCCC--hHHHHHHHHHHHHHHHHHHHHhC------CCccEEEEeeeHhhcccCCCCCcccC
Confidence 4799999998542 1 1122 23568899999999999987543 1256899999988665432
Q ss_pred ---------------CChhhhHHHHHHHHHHHHHHh-cccccCCCceEEEEeCCcccC
Q psy616 385 ---------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 ---------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+++|.+.+.++..... .++ +++.+..+...+
T Consensus 144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~~lrp~~v~G 195 (337)
T 2c29_D 144 ESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNI------DFITIIPTLVVG 195 (337)
T ss_dssp TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTC------CEEEEEECEEES
T ss_pred cccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCC------cEEEEeCCceEC
Confidence 234699999999998876543 344 677777665543
|
| >2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.8e-12 Score=119.81 Aligned_cols=79 Identities=10% Similarity=0.223 Sum_probs=72.6
Q ss_pred cchhHHHHHHHHHHHHHHhC-CCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 499 FNIEKFIENDIKNHICNILN-TKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 499 ~~~~~~~~~~l~~~ia~~L~-~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
....+.+++.+.+.|+++|+ .++++|+++++|++||+|||++++|+++|++.||++++.+.+|++||+.+|++||.+++
T Consensus 15 ~~~~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l 94 (95)
T 2ju1_A 15 AERTAELVRLVRTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCGGGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCChhhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence 34556788899999999999 67788999999999999999999999999999999999999999999999999998753
|
| >3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.5e-12 Score=155.28 Aligned_cols=109 Identities=14% Similarity=0.113 Sum_probs=68.6
Q ss_pred EEcCcCCCcceEEEEEcccccccccc-----------CCCCCccCCCCcEEEEeecCCHHHHHHHHHHHHHHHHhCC--C
Q psy616 1032 AVSAFGMSGTNAHIVLQEYISTNFKN-----------IKNNTFISSNPYHMVVLSAKTKISLKEKMKQILLFLRKNN--T 1098 (1152)
Q Consensus 1032 ~v~sfG~gG~nah~il~~~~~~~~~~-----------~~~~~~~~~~~~~l~~lSa~~~~~l~~~~~~l~~~l~~~~--~ 1098 (1152)
-+++||+.|||+|+|+|+.|...... ..........+.++++|||+|+.+|++++++|.+||+.++ .
T Consensus 5 ~~~~fg~sgtnah~~~e~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~lSA~s~~aL~~~a~~l~~~L~~~~~~~ 84 (491)
T 3tzy_A 5 RFDEFGNIITDSAVAEEPEPELPGVTEEALRLKEAALEELAAQEVTAPLVPLAVSAFLTSRKKAAAAELADWMQSPEGQA 84 (491)
T ss_dssp --------------------CCCCCCHHHHHHHHHHHHHHTTSCCCCCCEEEEEEESSHHHHHHHHHHHHHHHHSHHHHT
T ss_pred cHhhcCCCCcccccccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHhcCCCCC
Confidence 37899999999999999876422100 0001111234567899999999999999999999998643 5
Q ss_pred CCHHHHHHHHHhcCCCCCcEEEEEeCCHHHHHHHHHHhhcccc
Q psy616 1099 VCIENFVYTLMQGRHHFQYRCAIIISSIEEVVKIINDTLNSKE 1141 (1152)
Q Consensus 1099 ~~l~d~a~tl~~~r~~~~~R~a~~~~~~~~l~~~l~~~~~~~~ 1141 (1152)
..|.|+||||+ +|+||+||++++++|.+||++.|+.+..+.+
T Consensus 85 ~~l~dla~tla-~R~~~~~R~~vva~~~~el~~~L~a~a~g~~ 126 (491)
T 3tzy_A 85 SSLESIGRSLS-RRNHGRSRAVVLAHDHDEAIKGLRAVAAGKQ 126 (491)
T ss_dssp SCHHHHHHHHH-HSCCCSEEEEEEESSHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHh-cccCCCceEEEEECCHHHHHHhhhhhhcCCC
Confidence 78999999996 7999999999999999999999998765543
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.4e-11 Score=138.53 Aligned_cols=160 Identities=14% Similarity=0.197 Sum_probs=117.9
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++|||||+|+||.++++.|+++|..+++ +.|...... +....++.++.+|++|.+++.+++++ +.+|.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~ 70 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVV-VDNLQTGHE-----DAITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA 70 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE-EECCSSCCG-----GGSCTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEE-EeCCCcCch-----hhcCCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence 47999999999999999999999875444 455422110 11222577899999999998888765 37999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------ 384 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------------ 384 (1152)
|||+||... .. .+.+++...+++|+.|+.++.+++.. ...+.||++||.+.+ |..
T Consensus 71 vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~~~-------~~~~~~v~~Ss~~~~-~~~~~~~~~E~~~~~ 137 (330)
T 2c20_A 71 VMHFAADSL-VG----VSMEKPLQYYNNNVYGALCLLEVMDE-------FKVDKFIFSSTAATY-GEVDVDLITEETMTN 137 (330)
T ss_dssp EEECCCCCC-HH----HHHHSHHHHHHHHHHHHHHHHHHHHH-------TTCCEEEEECCGGGG-CSCSSSSBCTTSCCC
T ss_pred EEECCcccC-cc----ccccCHHHHHHHHhHHHHHHHHHHHH-------cCCCEEEEeCCceee-CCCCCCCCCcCCCCC
Confidence 999999754 21 14466788999999999999998532 245679999996553 322
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
....|+.+|.+.+.+++....+. +.+++.+..+..-
T Consensus 138 ~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~v~ 173 (330)
T 2c20_A 138 PTNTYGETKLAIEKMLHWYSQAS-----NLRYKIFRYFNVA 173 (330)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTS-----SCEEEEEECSEEE
T ss_pred CCChHHHHHHHHHHHHHHHHHHh-----CCcEEEEecCccc
Confidence 35789999999999998876541 3377777765543
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=2.6e-11 Score=139.33 Aligned_cols=154 Identities=13% Similarity=0.122 Sum_probs=113.8
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.+++++|||||+|+||.++++.|+++|..++++ .|+... ..+.++.+|++|.+++.++++ .
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~-~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGF-DLRPSG-----------TGGEEVVGSLEDGQALSDAIM-------G 77 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEE-ESSCCS-----------SCCSEEESCTTCHHHHHHHHT-------T
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEE-eCCCCC-----------CCccEEecCcCCHHHHHHHHh-------C
Confidence 467889999999999999999999999865555 554322 346788999999998887764 6
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-----------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG----------- 382 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g----------- 382 (1152)
+|+|||+|+... . +.++++..+++|+.|+.++.+++.. ...+.||++||.+.+-.
T Consensus 78 ~d~vih~A~~~~-~------~~~~~~~~~~~nv~~~~~ll~a~~~-------~~~~~~V~~SS~~vyg~~~~~~~~~~E~ 143 (347)
T 4id9_A 78 VSAVLHLGAFMS-W------APADRDRMFAVNVEGTRRLLDAASA-------AGVRRFVFASSGEVYPENRPEFLPVTED 143 (347)
T ss_dssp CSEEEECCCCCC-S------SGGGHHHHHHHHTHHHHHHHHHHHH-------TTCSEEEEEEEGGGTTTTSCSSSSBCTT
T ss_pred CCEEEECCcccC-c------chhhHHHHHHHHHHHHHHHHHHHHH-------cCCCeEEEECCHHHhCCCCCCCCCcCCC
Confidence 899999998754 2 2234588999999999999998632 34568999999654322
Q ss_pred --CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 383 --DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 383 --~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
......|+.+|...+.+++...... +.+++.+..+..-
T Consensus 144 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilRp~~v~ 183 (347)
T 4id9_A 144 HPLCPNSPYGLTKLLGEELVRFHQRSG-----AMETVILRFSHTQ 183 (347)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHS-----SSEEEEEEECEEE
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHhc-----CCceEEEccceEe
Confidence 1345789999999999998775542 2367777766543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.30 E-value=9.4e-12 Score=141.27 Aligned_cols=164 Identities=19% Similarity=0.191 Sum_probs=109.8
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC---CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF---NNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~---g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++++|||||+|+||.++++.|+++|..++++.+++.........+... +.++.++.+|++|.+++.++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 73 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE------- 73 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-------
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-------
Confidence 478999999999999999999999985444443132110001112211 1357889999999988877764
Q ss_pred CeeEEEEcccccCcCcccccCCHHH-HHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC-----
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKN-FYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS----- 386 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~-~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~----- 386 (1152)
.+|+|||+|+... .+.++ ++.++++|+.|+.++.+++.+ ....+.||++||.++..+.+..
T Consensus 74 ~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~gt~~l~~aa~~------~~~~~~iV~~SS~~~~~~~~~~~~~~~ 140 (322)
T 2p4h_X 74 GCVGIFHTASPID-------FAVSEPEEIVTKRTVDGALGILKACVN------SKTVKRFIYTSSGSAVSFNGKDKDVLD 140 (322)
T ss_dssp TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTT------CSSCCEEEEEEEGGGTSCSSSCCSEEC
T ss_pred CCCEEEEcCCccc-------CCCCChHHHHHHHHHHHHHHHHHHHHh------cCCccEEEEeccHHHcccCCCCCeecC
Confidence 4799999996321 11122 456899999999999998532 1135789999998866543211
Q ss_pred -----------------hhhhHHHHHHHHHHHHHHh-cccccCCCceEEEEeCCccc
Q psy616 387 -----------------CDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 387 -----------------~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~ 425 (1152)
..|+++|.+.+.++..... .++ +++.+..+...
T Consensus 141 e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi------~~~~lrp~~v~ 191 (322)
T 2p4h_X 141 ESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGI------DVVTLILPFIV 191 (322)
T ss_dssp TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTC------CEEEEEECEEE
T ss_pred CccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCC------cEEEEcCCceE
Confidence 1699999999988876543 333 67777766554
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.29 E-value=9.1e-12 Score=142.48 Aligned_cols=143 Identities=17% Similarity=0.221 Sum_probs=106.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+|+||.++++.|+++|.. |+++.|+.... .+.+... .++.++.+|++|.+++.++++. +++
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~--~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 90 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDK-VVGIDNFATGR--REHLKDH-PNLTFVEGSIADHALVNQLIGD-----LQP 90 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCC--GGGSCCC-TTEEEEECCTTCHHHHHHHHHH-----HCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEECCCccc--hhhHhhc-CCceEEEEeCCCHHHHHHHHhc-----cCC
Confidence 5689999999999999999999999874 55445543210 0111111 3688899999999999888865 379
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC------------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------ 382 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g------------ 382 (1152)
|.||||||... .. +.++++ +++|+.|+.++.+++.+ ...+.||++||.+.+ |
T Consensus 91 D~vih~A~~~~-~~-----~~~~~~--~~~N~~~~~~l~~a~~~-------~~~~~iV~~SS~~~~-g~~~~~~~~~~~E 154 (333)
T 2q1w_A 91 DAVVHTAASYK-DP-----DDWYND--TLTNCVGGSNVVQAAKK-------NNVGRFVYFQTALCY-GVKPIQQPVRLDH 154 (333)
T ss_dssp SEEEECCCCCS-CT-----TCHHHH--HHHHTHHHHHHHHHHHH-------TTCSEEEEEEEGGGG-CSCCCSSSBCTTS
T ss_pred cEEEECceecC-CC-----ccCChH--HHHHHHHHHHHHHHHHH-------hCCCEEEEECcHHHh-CCCcccCCCCcCC
Confidence 99999999765 22 334555 99999999999999753 245689999997654 4
Q ss_pred --CCCChhhhHHHHHHHHHHHH
Q psy616 383 --DFGSCDYAMGNRFQTVYAKY 402 (1152)
Q Consensus 383 --~~g~~~Yaaana~l~~la~~ 402 (1152)
.+....|+.+|.+++.+++.
T Consensus 155 ~~~p~~~~Y~~sK~~~E~~~~~ 176 (333)
T 2q1w_A 155 PRNPANSSYAISKSANEDYLEY 176 (333)
T ss_dssp CCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHHHHh
Confidence 22227899999999999876
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.29 E-value=5.4e-12 Score=142.92 Aligned_cols=158 Identities=15% Similarity=0.126 Sum_probs=117.5
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++|||||+|+||.++++.|+++| .++++..|+.... +.....+.++.+|++| +++.++++ .+|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~------~~~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~ 66 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNE------EFVNEAARLVKADLAA-DDIKDYLK-------GAEE 66 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCG------GGSCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCCh------hhcCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence 469999999999999999999999 6777766654321 1224568899999999 77776654 6999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-----------CCCC
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-----------GDFG 385 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~-----------g~~g 385 (1152)
|||+|+... ...+.++++..+++|+.|+.++.+++.. ...+.||++||.+.+- +...
T Consensus 67 vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~-------~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~ 134 (313)
T 3ehe_A 67 VWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRK-------AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHP 134 (313)
T ss_dssp EEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHH-------HTCCEEEEECCGGGGCSCSSSSBCTTSCCCC
T ss_pred EEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHH-------cCCCeEEEeCchHHhCcCCCCCCCCCCCCCC
Confidence 999998543 2334556788999999999999998532 1356899999976542 2234
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
...|+.+|.+.+.+++....+. +.+++.+..+..-+
T Consensus 135 ~~~Y~~sK~~~e~~~~~~~~~~-----g~~~~ilRp~~v~G 170 (313)
T 3ehe_A 135 ISLYGASKLACEALIESYCHTF-----DMQAWIYRFANVIG 170 (313)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECSCEES
T ss_pred CCHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeeccccC
Confidence 5789999999999998876541 33777787766543
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.29 E-value=7.2e-12 Score=146.29 Aligned_cols=275 Identities=14% Similarity=0.106 Sum_probs=177.5
Q ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC
Q psy616 707 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG 786 (1152)
Q Consensus 707 is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G 786 (1152)
+..+....++....|..+++.+||++||+++++++ .|++++..+ +. . ...+.++...+|+++
T Consensus 91 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId----~vi~~t~t~-~~--------~-----p~~a~~v~~~LGl~~ 152 (393)
T 3ov2_A 91 FDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEIT----HLVFCSISG-ID--------M-----PGADYRLATLLGLPL 152 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEESSC-CC--------B-----SCHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCC-CC--------C-----CCHHHHHHHHcCCCC
Confidence 44555566677888999999999999999998887 688887654 11 1 125788999999998
Q ss_pred C---cccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccE
Q psy616 787 P---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVV 863 (1152)
Q Consensus 787 P---s~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~ 863 (1152)
. .+.+..+|+|++.||..|...|++|.++.+||+|++.+.. .+..++.+ .++.....+.+|+|++
T Consensus 153 ~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~----------~~~~~~d~--~~~~~~~~~lFGDGAa 220 (393)
T 3ov2_A 153 TVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVL----------SFRGPNEG--DFEALAGQAGFGDGAG 220 (393)
T ss_dssp TSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGG----------TCCCCCTT--CHHHHHHHHHBCCEEE
T ss_pred CcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccch----------hccCCccc--chhhhcccccccCccE
Confidence 5 6899999999999999999999999999999999998421 22222211 1111124678999999
Q ss_pred EEEEcccchhhcCCCceEEEEEEEEEecCCCC---------CCC---CCCCHH-----HHHHHHHHHHHHcCCCC-CCcc
Q psy616 864 AVVLKRLSRALSDGDPIHAIIRGSGINYDGKT---------NGI---TAPNGI-----SQTELIKSVYKKSNLNP-EDIN 925 (1152)
Q Consensus 864 ~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~---------~~~---~~P~~~-----~q~~~i~~al~~Agi~p-~dI~ 925 (1152)
++||++.+.. .-.+.++-++........+.. .++ ..+... ...++++++|+++|+++ +||
T Consensus 221 A~vl~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di- 298 (393)
T 3ov2_A 221 AVVVGADPLE-GIEKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV- 298 (393)
T ss_dssp EEEEESSCCT-TTCCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-
T ss_pred EEEEEecCCC-cccCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-
Confidence 9999875432 111234444433222211110 000 012221 22468999999999997 888
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHHHHHHHh-hhcCCcCCCCCCCCCCc
Q psy616 926 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQS-IKYKIIPASLHCEKENN 1003 (1152)
Q Consensus 926 yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~lik~~l~-l~~~~ipp~~~~~~~np 1003 (1152)
++-.|-.+.. =++++.+.++-... + +... .+=...||+-+|+=...|-.++-. ++.|.+.|-
T Consensus 299 ~~v~Hq~n~~-----i~~~v~~~Lgl~~e--k-~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G-------- 362 (393)
T 3ov2_A 299 FWVAHPGNWA-----IIDAIEAKLQLSPD--K-LSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTG-------- 362 (393)
T ss_dssp EEEECCCCHH-----HHHHHHHHHTCCTT--T-THHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTT--------
T ss_pred EEEECCCChH-----HHHHHHHHcCCCHH--H-HHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCC--------
Confidence 8889955443 34566666653221 1 1111 122357999999877666554432 222333210
Q ss_pred ccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 1004 YIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 1004 ~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
+.....++.+||.|-+-..++|+..+
T Consensus 363 ----------------------~~~d~vll~~fG~G~t~~~~ll~~~~ 388 (393)
T 3ov2_A 363 ----------------------DGLQWGVLLGFGPGLSIETVVLRSMP 388 (393)
T ss_dssp ----------------------TTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred ----------------------CCCCeEEEEEECccceeeeeeeEEcc
Confidence 01134578899999999999998643
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=5.1e-12 Score=142.99 Aligned_cols=160 Identities=16% Similarity=0.164 Sum_probs=115.6
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
++|||||+|+||.++++.|+++|..+ +++.|..... .......+.++.+|++|.+++.+++++ ..+|.|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V-~~~~r~~~~~-----~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~v 70 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEV-AVLDNLATGK-----RENVPKGVPFFRVDLRDKEGVERAFRE-----FRPTHV 70 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEE-EEECCCSSCC-----GGGSCTTCCEECCCTTCHHHHHHHHHH-----HCCSEE
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEE-EEEECCCcCc-----hhhcccCeEEEECCCCCHHHHHHHHHh-----cCCCEE
Confidence 58999999999999999999998854 4445532110 011113466789999999999888764 268999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-------------C
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-------------F 384 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-------------~ 384 (1152)
||+||... . ..+.+++...+++|+.|+.++.+++.. ...+.||++||..+..|. .
T Consensus 71 i~~a~~~~-~----~~~~~~~~~~~~~N~~g~~~l~~a~~~-------~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~ 138 (311)
T 2p5y_A 71 SHQAAQAS-V----KVSVEDPVLDFEVNLLGGLNLLEACRQ-------YGVEKLVFASTGGAIYGEVPEGERAEETWPPR 138 (311)
T ss_dssp EECCSCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHH-------TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCC
T ss_pred EECccccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHH-------hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCC
Confidence 99998754 1 124566788999999999999998642 235689999998444332 1
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
....|+++|.+++.+++....+. +.+++.+..+..-
T Consensus 139 ~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~lrp~~v~ 174 (311)
T 2p5y_A 139 PKSPYAASKAAFEHYLSVYGQSY-----GLKWVSLRYGNVY 174 (311)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECEEE
T ss_pred CCChHHHHHHHHHHHHHHHHHHc-----CCCEEEEeecccc
Confidence 35689999999999998775431 2367777665543
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.9e-11 Score=127.62 Aligned_cols=185 Identities=12% Similarity=0.049 Sum_probs=125.6
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
++++||||+|+||+++++.|+++|. .|+++.|++.... . ....++.++.+|++|++++.++++ .+|.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~---~--~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~ 70 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLP---S--EGPRPAHVVVGDVLQAADVDKTVA-------GQDA 70 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSC---S--SSCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcc---c--ccCCceEEEEecCCCHHHHHHHHc-------CCCE
Confidence 6899999999999999999999986 5666666542210 0 113467889999999988877764 4799
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC----CChhhhHH
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----GSCDYAMG 392 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~----g~~~Yaaa 392 (1152)
|||+||... .. +. .++|+.++.++.+++... ..++||++||........ ....|+.+
T Consensus 71 vi~~a~~~~-~~---~~--------~~~n~~~~~~~~~~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~ 131 (206)
T 1hdo_A 71 VIVLLGTRN-DL---SP--------TTVMSEGARNIVAAMKAH-------GVDKVVACTSAFLLWDPTKVPPRLQAVTDD 131 (206)
T ss_dssp EEECCCCTT-CC---SC--------CCHHHHHHHHHHHHHHHH-------TCCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred EEECccCCC-CC---Cc--------cchHHHHHHHHHHHHHHh-------CCCeEEEEeeeeeccCcccccccchhHHHH
Confidence 999999755 21 11 137788888888875431 356799999986654433 56789999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|..++.+.+ ..+ .+++.+..+.+.+..+....... .....+...+.+++..+++..++..+
T Consensus 132 K~~~e~~~~---~~~------i~~~~lrp~~~~~~~~~~~~~~~---~~~~~~~~~i~~~Dva~~~~~~~~~~ 192 (206)
T 1hdo_A 132 HIRMHKVLR---ESG------LKYVAVMPPHIGDQPLTGAYTVT---LDGRGPSRVISKHDLGHFMLRCLTTD 192 (206)
T ss_dssp HHHHHHHHH---HTC------SEEEEECCSEEECCCCCSCCEEE---SSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHH---hCC------CCEEEEeCCcccCCCCCcceEec---ccCCCCCCccCHHHHHHHHHHHhcCc
Confidence 999998874 233 37888887766322211100000 00011125678999999998888664
|
| >2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A | Back alignment and structure |
|---|
Probab=99.28 E-value=7.4e-12 Score=113.76 Aligned_cols=76 Identities=16% Similarity=0.271 Sum_probs=71.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
...+++.+.+.|+++|+++.++|+.+++|++||+|||++++|+.+|++.||+++++..+|++||+.+|++||.+++
T Consensus 12 ~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~~ 87 (88)
T 2afd_A 12 VEDIQSWLIDQFAQQLDVDPDDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGELY 87 (88)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 4557888999999999998889999999999999999999999999999999999999999999999999998754
|
| >4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.1e-12 Score=116.98 Aligned_cols=76 Identities=12% Similarity=0.179 Sum_probs=69.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 501 IEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 501 ~~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
+...+++.|.++|+++|+++ +|+.+++||++|+|||++++|..+|++.||++|++..+|++|||.+|++||.+...
T Consensus 13 ~~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~~ 88 (93)
T 4i4d_A 13 RRRALERDIAAIWAETLGRD--SVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATLT 88 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTCS--CCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHcc
Confidence 44567889999999999984 69999999999999999999999999999999999999999999999999987643
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.26 E-value=5.7e-11 Score=137.04 Aligned_cols=245 Identities=13% Similarity=0.085 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCs 796 (1152)
...|+.+++.+||++||+++++++ .|++|+.... .+. . ...+.++...+|+++ |.+.|..+|+
T Consensus 54 ~~~La~~Aa~~aL~~ag~~~~dId----~vi~~t~~~~------~~d-~-----~~~a~~v~~~lG~~~~~~~~v~~aC~ 117 (357)
T 3s3l_A 54 PPRMAARAARAALGRGDVDPADVS----LVLHSSLWFQ------GID-L-----WPAASYVAHEAVGRHVPAFGLAQRCN 117 (357)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE----EEEEECSSCC------SSS-S-----SCHHHHHHHHHTCSSSCEEEEECGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCC------Ccc-c-----ccHHHHHHHHhCCCCCcEEEEcCccH
Confidence 467899999999999999887776 5777765310 000 0 023678888999964 8999999999
Q ss_pred hHHHHHHHHHHHHHcCCCC--EEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhh
Q psy616 797 SSLVATHIACQSLRQHECD--TAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 874 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d--~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~ 874 (1152)
|++.||..|...|++|.++ .+||+|++.+..+. + ..|+. +.++.+|+|++++||++-+.
T Consensus 118 ~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------~------~~~~~-~~~~lfGDGA~A~vl~~~~~-- 178 (357)
T 3s3l_A 118 GGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------I------DRWNS-VDVTMYGDGAAALVLSTRDG-- 178 (357)
T ss_dssp HHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT----------C------CTTTS-SSSCCBCCEEEEEEEESSCC--
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc----------c------ccccc-cCCcccccccEEEEEecCCC--
Confidence 9999999999999999999 99999999753210 1 11222 25788999999999986431
Q ss_pred cCCCceEEEEEEEEEecCCCCC-------CCCCC----------CH-------------------HHHHHHHHHHHHHcC
Q psy616 875 SDGDPIHAIIRGSGINYDGKTN-------GITAP----------NG-------------------ISQTELIKSVYKKSN 918 (1152)
Q Consensus 875 ~dgd~i~avI~g~a~~~dG~~~-------~~~~P----------~~-------------------~~q~~~i~~al~~Ag 918 (1152)
+.+ |.++....||... ....| ++ ....++++++|+++|
T Consensus 179 --~~~----i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~L~~~g 252 (357)
T 3s3l_A 179 --FAR----VLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAAKTQALEDAG 252 (357)
T ss_dssp --SEE----EEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred --CCe----EEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHHHHHHHHHHHHHcC
Confidence 122 4444444454311 01111 11 134567899999999
Q ss_pred CCCCCccEEEe-cCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCC
Q psy616 919 LNPEDINYIIT-HGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLH 997 (1152)
Q Consensus 919 i~p~dI~yve~-hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~ 997 (1152)
++++||+|+-. |-.... -+ ++.+.++-... + +.. .+-..+||+.+|+=...|-.++ +.|.+.|
T Consensus 253 l~~~did~~v~~hq~~~~-~~-----~~~~~lgl~~e--k-~~~-~~~~~~GNt~aAsipl~L~~~~---~~g~l~~--- 316 (357)
T 3s3l_A 253 TAIEDIAHAVIPVSRRGT-GH-----ELHDLLGLPDE--R-TSW-AYGRTTGHVGAGDQYAGLAHLV---ENALVQP--- 316 (357)
T ss_dssp CCGGGCSEEECCSCCCCS-SC-----CHHHHHTSCGG--G-BTH-HHHHHHCBCTTCHHHHHHHHHH---HTTCCCT---
T ss_pred CCHHHCCEEEecCcChHH-HH-----HHHHHcCCCHH--H-hHH-HhccccccchHhHHHHHHHHHH---HcCCCCC---
Confidence 99999999996 866655 33 34444543221 1 111 1222469998888666665433 3332211
Q ss_pred CCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcc
Q psy616 998 CEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 998 ~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~ 1049 (1152)
-.+.++.+||.|-+-+.++|+-
T Consensus 317 ------------------------------Gd~vll~~fG~G~t~~a~ll~~ 338 (357)
T 3s3l_A 317 ------------------------------GDRVLLFGGGAGYTCTAAVVEI 338 (357)
T ss_dssp ------------------------------TCEEEEECCBTTTEEEEEEEEE
T ss_pred ------------------------------CCEEEEEEEchhhhheeeeEEe
Confidence 1245788999999999999973
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=2e-10 Score=130.61 Aligned_cols=242 Identities=15% Similarity=0.147 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCcccccccch
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACS 796 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs~tvdtaCs 796 (1152)
...|..+++.+||++||+++++++ .+++|+...++. . ...+.+++..+|++ .|.+.|..+|+
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id----~li~~t~~~~~~--------~-----p~~a~~v~~~lGl~~~~~~~v~~aC~ 114 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEID----FILVATVTPDFN--------M-----PSVACQVQGAIGATEAFAFDISAACS 114 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCS--------S-----SCHHHHHHHHTTCTTCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCcC--------C-----CcHHHHHHHHcCCCCceEEEeCcccH
Confidence 567899999999999999988877 788887653321 1 12578899999997 69999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||..|++.|++|+++.+||+|++.+. .. +.+ +.......+|+|++++||++.+.
T Consensus 115 s~~~al~~A~~~i~~g~~~~vLvvg~e~~s-~~----------~~~-------~dr~~~~lfGDGA~A~vl~~~~~---- 172 (321)
T 3il6_A 115 GFVYALSMAEKLVLSGRYQTGLVIGGETFS-KM----------LDW-------TDRSTAVLFGDGAAGVLIEAAET---- 172 (321)
T ss_dssp HHHHHHHHHHHHHHTSSCCCEEEEEEECGG-GG----------SCT-------TCTTTGGGBCCEEEEEEEEEESS----
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc----------CCc-------cccccceeeccccEEEEEEEcCC----
Confidence 999999999999999999999999999742 11 111 11234578999999999987542
Q ss_pred CCceEEEEEEEEEecCCC------------CCCC----------CCCCHHH-H---HHHHHHHHHHcCCCCCCccEEEec
Q psy616 877 GDPIHAIIRGSGINYDGK------------TNGI----------TAPNGIS-Q---TELIKSVYKKSNLNPEDINYIITH 930 (1152)
Q Consensus 877 gd~i~avI~g~a~~~dG~------------~~~~----------~~P~~~~-q---~~~i~~al~~Agi~p~dI~yve~h 930 (1152)
..|.... ..+||. .... ..-++.. . .+.+.++++++ +.++||+++-.|
T Consensus 173 -~~i~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~did~~v~H 246 (321)
T 3il6_A 173 -PHFLNEK----LQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDETVDYLLLH 246 (321)
T ss_dssp -CCEEEEE----EEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGGGCSEEEEC
T ss_pred -CCEEEEE----EEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCcccCCEEEEc
Confidence 2344332 222221 1111 1112211 1 12233333332 228999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCC
Q psy616 931 GTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNS 1010 (1152)
Q Consensus 931 gtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~ 1010 (1152)
-.+.. =++++.+.++-...+ +. ..-..+||+-+|+=...|-.+ ++.|.+.|
T Consensus 247 q~~~~-----i~~~~~~~lgl~~ek---~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~~~---------------- 297 (321)
T 3il6_A 247 QANVR-----IIDKIARKTKISREK---FL--TNMDKYGNTSAASIPILLDEA---VENGTLIL---------------- 297 (321)
T ss_dssp CSCHH-----HHHHHHHHHTCCGGG---BC--CCGGGTCBCGGGHHHHHHHHH---HHTTSSCT----------------
T ss_pred CCCHH-----HHHHHHHHcCcCHHH---hh--hhHhhcccHHHHHHHHHHHHH---HHhCCCCC----------------
Confidence 66554 345666666533211 22 234677999988866655443 34433321
Q ss_pred CeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1011 PFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1011 ~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+...+.+..+||.|-+-..++|+
T Consensus 298 ---------------G~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 298 ---------------GSQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp ---------------TSCCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------CCCCEEEEEEEehhheeEEEEEE
Confidence 00124578899999999998885
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.7e-11 Score=139.08 Aligned_cols=167 Identities=14% Similarity=0.170 Sum_probs=116.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~-~vil~~R~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++|||||+|+||..+++.|+++|.. .|+...|...... ...++.. ..++.++.+|++|.+++.++++..
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 97 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN-LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER---- 97 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH----
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc-hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc----
Confidence 4678999999999999999999999843 4444444421110 1112221 247899999999999999988763
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 384 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------- 384 (1152)
++|.|||+||... . ..+.+++...+++|+.|+.++.+++.. .....||++||.+.+-...
T Consensus 98 -~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~~~-------~~~~~~v~~SS~~vy~~~~~~~~~~E 164 (346)
T 4egb_A 98 -DVQVIVNFAAESH-V----DRSIENPIPFYDTNVIGTVTLLELVKK-------YPHIKLVQVSTDEVYGSLGKTGRFTE 164 (346)
T ss_dssp -TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHH-------STTSEEEEEEEGGGGCCCCSSCCBCT
T ss_pred -CCCEEEECCcccc-h----hhhhhCHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEEeCchHHhCCCCcCCCcCC
Confidence 6999999999765 2 224566788999999999999998642 2456799999975443221
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCccc
Q psy616 385 -----GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 385 -----g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 425 (1152)
....|+.+|...+.+++....+ ++ +++.+..+..-
T Consensus 165 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~------~~~ilRp~~v~ 205 (346)
T 4egb_A 165 ETPLAPNSPYSSSKASADMIALAYYKTYQL------PVIVTRCSNNY 205 (346)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECEEE
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHhCC------CEEEEeeccee
Confidence 1378999999999999877654 33 66667665443
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=5.1e-12 Score=134.65 Aligned_cols=191 Identities=13% Similarity=0.006 Sum_probs=130.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++||||+|+||.++++.|+++|. ..|+++.|++.. ...++.++.+|++|.+++.+++ +
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~---------~ 66 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGS---------I 66 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSC---------C
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhh---------h
Confidence 57899999999999999999999987 367777776543 1346788899998876654433 8
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|.||||||... . +.++++..+++|+.++.++.+++.+ ...+.||++||..... .....|+.+|.
T Consensus 67 d~vi~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~-------~~~~~~v~~Ss~~~~~--~~~~~y~~sK~ 130 (215)
T 2a35_A 67 DTAFCCLGTTI-K------EAGSEEAFRAVDFDLPLAVGKRALE-------MGARHYLVVSALGADA--KSSIFYNRVKG 130 (215)
T ss_dssp SEEEECCCCCH-H------HHSSHHHHHHHHTHHHHHHHHHHHH-------TTCCEEEEECCTTCCT--TCSSHHHHHHH
T ss_pred cEEEECeeecc-c------cCCCHHHHHHhhHHHHHHHHHHHHH-------cCCCEEEEECCcccCC--CCccHHHHHHH
Confidence 99999999754 1 1345778889999999999998543 2456799999987653 24568999999
Q ss_pred HHHHHHHHHHhcccccCCCce-EEEEeCCcccCccccccccccch---hHHhhcCCCCCCHHHHHHHHHHHHhcCceee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNK-LITINWPLWNNSKFKIGNNEQTD---FYFKSSKQKVLHENDGLKLFEQLLIQDKIQY 469 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~-~~si~wg~w~~~Gm~~~~~~~~~---~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~ 469 (1152)
.++.+.+. .+ .+ ++.|.++.+.+.+.......... ..........+..++..+++..++..+....
T Consensus 131 ~~e~~~~~---~~------~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~ 200 (215)
T 2a35_A 131 ELEQALQE---QG------WPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGKGV 200 (215)
T ss_dssp HHHHHHTT---SC------CSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCSEE
T ss_pred HHHHHHHH---cC------CCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCCCCc
Confidence 99988753 23 36 78888777654332100000000 0000001123567888888888887665433
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.3e-11 Score=139.69 Aligned_cols=162 Identities=15% Similarity=0.144 Sum_probs=116.8
Q ss_pred CEEEEECCchhHHHHHHHHHHHc--CCcEEEEecCCcc--hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 237 GTYLITGGTGRLGMLFSDYLINK--YSTNLILSGRSKL--NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~--Ga~~vil~~R~~~--~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++|||||+|+||.++++.|+++ |. .|+++.|+.. ..+....+ .+.++.++.+|++|.+++.++++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~------- 74 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA------- 74 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCC-EEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------
Confidence 68999999999999999999999 55 5555555431 11111112 13568899999999988877764
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-----------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL----------- 381 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~----------- 381 (1152)
.+|.|||+||... . +.+.++++..+++|+.|+.++.+++.+. .. .||++||.+.+-
T Consensus 75 ~~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-------~~-~~v~~SS~~vyg~~~~~~~~~~~ 141 (348)
T 1oc2_A 75 KADAIVHYAAESH-N----DNSLNDPSPFIHTNFIGTYTLLEAARKY-------DI-RFHHVSTDEVYGDLPLREDLPGH 141 (348)
T ss_dssp TCSEEEECCSCCC-H----HHHHHCCHHHHHHHTHHHHHHHHHHHHH-------TC-EEEEEEEGGGGCCBCCGGGSTTT
T ss_pred cCCEEEECCcccC-c----cchhhCHHHHHHHHHHHHHHHHHHHHHh-------CC-eEEEecccceeCCCccccccccc
Confidence 3599999999754 1 2234567789999999999999997653 23 799999976331
Q ss_pred ------------CCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 382 ------------GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 382 ------------g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
+......|+.+|.+.+.+++....+. +.+++.+..+.+-+
T Consensus 142 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----gi~~~ilrp~~v~G 193 (348)
T 1oc2_A 142 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF-----GVKATISNCSNNYG 193 (348)
T ss_dssp TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECCEES
T ss_pred ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-----CCCEEEEeeceeeC
Confidence 12345789999999999998775531 23777777765543
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.23 E-value=7.4e-11 Score=130.49 Aligned_cols=132 Identities=17% Similarity=0.154 Sum_probs=103.9
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
++|||||+|+||.++++.|+ +|. .|+++.|++... .+ +.+|++|++++.++++.+ ++|.|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~-~V~~~~r~~~~~--------~~-----~~~Dl~~~~~~~~~~~~~-----~~d~v 61 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ERH-EVIKVYNSSEIQ--------GG-----YKLDLTDFPRLEDFIIKK-----RPDVI 61 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TTS-CEEEEESSSCCT--------TC-----EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred EEEEECCCChhHHHHHHHHh-cCC-eEEEecCCCcCC--------CC-----ceeccCCHHHHHHHHHhc-----CCCEE
Confidence 58999999999999999999 475 555556654321 12 789999999999888765 69999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC----------Ch
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG----------SC 387 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g----------~~ 387 (1152)
|||||... . +.+.++++..+++|+.|+.++.+++.+ .. ..||++||.+.+.+..+ ..
T Consensus 62 i~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~-------~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~ 128 (273)
T 2ggs_A 62 INAAAMTD-V----DKCEIEKEKAYKINAEAVRHIVRAGKV-------ID-SYIVHISTDYVFDGEKGNYKEEDIPNPIN 128 (273)
T ss_dssp EECCCCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHH-------TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSS
T ss_pred EECCcccC-h----hhhhhCHHHHHHHhHHHHHHHHHHHHH-------hC-CeEEEEecceeEcCCCCCcCCCCCCCCCC
Confidence 99999754 2 223567889999999999999999643 12 37999999887655443 57
Q ss_pred hhhHHHHHHHHHHHH
Q psy616 388 DYAMGNRFQTVYAKY 402 (1152)
Q Consensus 388 ~Yaaana~l~~la~~ 402 (1152)
.|+++|.+++.+++.
T Consensus 129 ~Y~~sK~~~e~~~~~ 143 (273)
T 2ggs_A 129 YYGLSKLLGETFALQ 143 (273)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhC
Confidence 899999999999865
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=3.4e-11 Score=137.70 Aligned_cols=163 Identities=15% Similarity=0.143 Sum_probs=115.7
Q ss_pred EEEEECCchhHHHHHHHHHHHc---CC--cEEEEecCCcc--hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 238 TYLITGGTGRLGMLFSDYLINK---YS--TNLILSGRSKL--NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~---Ga--~~vil~~R~~~--~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
++|||||+|+||.++++.|+++ |. ..|+++.|... ..+..+.+. .+.++.++.+|++|.+++.+++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~------ 74 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLAREL------ 74 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHT------
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh------
Confidence 5899999999999999999996 51 35655555421 111111121 1457889999999998887765
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc---------
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL--------- 381 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~--------- 381 (1152)
+.+|.|||+||... . +.+.++++..+++|+.|+.++.+++.+. ..+.||++||.+.+-
T Consensus 75 -~~~d~Vih~A~~~~-~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-------~~~~~v~~SS~~vyg~~~~~~~~E 141 (337)
T 1r6d_A 75 -RGVDAIVHFAAESH-V----DRSIAGASVFTETNVQGTQTLLQCAVDA-------GVGRVVHVSTNQVYGSIDSGSWTE 141 (337)
T ss_dssp -TTCCEEEECCSCCC-H----HHHHHCCHHHHHHHTHHHHHHHHHHHHT-------TCCEEEEEEEGGGGCCCSSSCBCT
T ss_pred -cCCCEEEECCCccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHHc-------CCCEEEEecchHHhCCCCCCCCCC
Confidence 47999999999754 1 1234566789999999999999997542 346899999975432
Q ss_pred --CCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 382 --GDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 382 --g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
+......|+.+|.+.+.+++....+. +.+++.+..+..-
T Consensus 142 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----g~~~~ilrp~~v~ 182 (337)
T 1r6d_A 142 SSPLEPNSPYAASKAGSDLVARAYHRTY-----GLDVRITRCCNNY 182 (337)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECEEE
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHH-----CCCEEEEEeeeeE
Confidence 12346789999999999998766531 2366677665543
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=3.4e-11 Score=140.38 Aligned_cols=163 Identities=13% Similarity=0.015 Sum_probs=116.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
..+++|||||+|+||..+++.|+++|.. |+++.|+..... .+ ....+.++.+|++|.+++.++++ .+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~---~~--~~~~v~~~~~Dl~d~~~~~~~~~-------~~ 94 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHY-VIASDWKKNEHM---TE--DMFCDEFHLVDLRVMENCLKVTE-------GV 94 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCSSS---CG--GGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCe-EEEEECCCccch---hh--ccCCceEEECCCCCHHHHHHHhC-------CC
Confidence 4578999999999999999999999875 555555432110 01 12356788999999998887763 68
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC------------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------ 382 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g------------ 382 (1152)
|.|||+||... .... +.+++...+++|+.|+.++.+++.. ...+.||++||.+.+-.
T Consensus 95 d~Vih~A~~~~-~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~-------~~~~~~V~~SS~~v~~~~~~~~~~~~~~~ 163 (379)
T 2c5a_A 95 DHVFNLAADMG-GMGF---IQSNHSVIMYNNTMISFNMIEAARI-------NGIKRFFYASSACIYPEFKQLETTNVSLK 163 (379)
T ss_dssp SEEEECCCCCC-CHHH---HTTCHHHHHHHHHHHHHHHHHHHHH-------TTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred CEEEECceecC-cccc---cccCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEEeehheeCCCCCCCccCCCcC
Confidence 99999999754 2211 1245678899999999999998642 24568999999754321
Q ss_pred ------CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 383 ------DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 383 ------~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
......|+.+|.+.+.+++....+. +.+++.|..+.+-+
T Consensus 164 E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----gi~~~ilrp~~v~G 208 (379)
T 2c5a_A 164 ESDAWPAEPQDAFGLEKLATEELCKHYNKDF-----GIECRIGRFHNIYG 208 (379)
T ss_dssp GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECCEEC
T ss_pred cccCCCCCCCChhHHHHHHHHHHHHHHHHHH-----CCCEEEEEeCceeC
Confidence 1235689999999999998765431 23777777766544
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.3e-11 Score=135.19 Aligned_cols=158 Identities=15% Similarity=0.148 Sum_probs=115.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHc--CCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINK--YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~--Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++|||||+|+||.++++.|+++ |..++++. |+...... .. ++.++.+|++|.+++.+++++. .+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~-r~~~~~~~----~~---~~~~~~~D~~d~~~~~~~~~~~-----~~ 69 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASD-IRKLNTDV----VN---SGPFEVVNALDFNQIEHLVEVH-----KI 69 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEE-SCCCSCHH----HH---SSCEEECCTTCHHHHHHHHHHT-----TC
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEc-CCCccccc----cC---CCceEEecCCCHHHHHHHHhhc-----CC
Confidence 57999999999999999999998 66555554 44322221 11 2467899999999998887653 69
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF---------- 384 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~---------- 384 (1152)
|.|||+||... .. ..+++...+++|+.|+.++.+++. ....+.||++||.+.+-+..
T Consensus 70 d~vih~a~~~~-~~-----~~~~~~~~~~~n~~~~~~l~~~~~-------~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~ 136 (312)
T 2yy7_A 70 TDIYLMAALLS-AT-----AEKNPAFAWDLNMNSLFHVLNLAK-------AKKIKKIFWPSSIAVFGPTTPKENTPQYTI 136 (312)
T ss_dssp CEEEECCCCCH-HH-----HHHCHHHHHHHHHHHHHHHHHHHH-------TTSCSEEECCEEGGGCCTTSCSSSBCSSCB
T ss_pred CEEEECCccCC-Cc-----hhhChHHHHHHHHHHHHHHHHHHH-------HcCCCEEEEeccHHHhCCCCCCCCccccCc
Confidence 99999999754 21 235677889999999999999853 23456899999976553322
Q ss_pred --CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 385 --GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 385 --g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
....|+.+|.+.+.+++....+. +.+++.+..+.+-
T Consensus 137 ~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~lrp~~v~ 174 (312)
T 2yy7_A 137 MEPSTVYGISKQAGERWCEYYHNIY-----GVDVRSIRYPGLI 174 (312)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH-----CCEEECEEECEEE
T ss_pred CCCCchhHHHHHHHHHHHHHHHHhc-----CCcEEEEeCCeEe
Confidence 25689999999999998765431 2367777665443
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=3.4e-11 Score=136.42 Aligned_cols=154 Identities=18% Similarity=0.240 Sum_probs=113.7
Q ss_pred EEEECCchhHHHHHHHHHHHc--CCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 239 YLITGGTGRLGMLFSDYLINK--YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~--Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+|||||+|+||.++++.|+++ |..++++..+....+ .+.++.+|++|.+++.++++. ..+|.
T Consensus 2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~-----~~~d~ 65 (317)
T 3ajr_A 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK-----YSIDA 65 (317)
T ss_dssp EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH-----TTCCE
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh-----cCCcE
Confidence 799999999999999999998 665555544333211 356789999999999888765 26999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------ 384 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------------ 384 (1152)
|||+||... . ...+++...+++|+.|+.++.+++.. ...+.||++||.+.+-+..
T Consensus 66 vih~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~a~~~-------~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~ 132 (317)
T 3ajr_A 66 IFHLAGILS-A-----KGEKDPALAYKVNMNGTYNILEAAKQ-------HRVEKVVIPSTIGVFGPETPKNKVPSITITR 132 (317)
T ss_dssp EEECCCCCH-H-----HHHHCHHHHHHHHHHHHHHHHHHHHH-------TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCC
T ss_pred EEECCcccC-C-----ccccChHHHhhhhhHHHHHHHHHHHH-------cCCCEEEEecCHHHhCCCCCCCCccccccCC
Confidence 999999754 1 12355778899999999999998642 2456899999987654321
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+.+|.+.+.+++...... +.+++.+..+.+-+
T Consensus 133 p~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~lR~~~~~g 169 (317)
T 3ajr_A 133 PRTMFGVTKIAAELLGQYYYEKF-----GLDVRSLRYPGIIS 169 (317)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECEEEC
T ss_pred CCchHHHHHHHHHHHHHHHHHhc-----CCeEEEEecCcEec
Confidence 35789999999999998765431 23777776555543
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.5e-11 Score=142.03 Aligned_cols=163 Identities=14% Similarity=0.155 Sum_probs=115.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|||||+|+||.++++.|+++|...|+++.|+..... ...+. +. . +.+|++|.+.++++++. ..++++
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~--~~--~-~~~d~~~~~~~~~~~~~--~~~~~~ 116 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLV--DL--N-IADYMDKEDFLIQIMAG--EEFGDV 116 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGGTT--TS--C-CSEEEEHHHHHHHHHTT--CCCSSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhccc--Cc--e-EeeecCcHHHHHHHHhh--cccCCC
Confidence 35789999999999999999999999345555566543211 11111 12 2 67899999888877754 236789
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC---------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG--------- 385 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g--------- 385 (1152)
|.|||+||... . +.++++..+++|+.|+.++.+++.+. .. .||++||.+.+-...+
T Consensus 117 d~Vih~A~~~~-~------~~~~~~~~~~~n~~~~~~ll~a~~~~-------~~-r~V~~SS~~v~g~~~~~~~~E~~~~ 181 (357)
T 2x6t_A 117 EAIFHEGACSS-T------TEWDGKYMMDNNYQYSKELLHYCLER-------EI-PFLYASSAATYGGRTSDFIESREYE 181 (357)
T ss_dssp CEEEECCSCCC-T------TCCCHHHHHHHTHHHHHHHHHHHHHH-------TC-CEEEEEEGGGGCSCSSCCCSSGGGC
T ss_pred CEEEECCcccC-C------ccCCHHHHHHHHHHHHHHHHHHHHHc-------CC-eEEEEcchHHhCCCCCCCcCCcCCC
Confidence 99999999765 2 22356789999999999999997542 23 6999999865433222
Q ss_pred --ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 386 --SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 386 --~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
...|+.+|.+.+.+++....+. +.+++.|..+..-
T Consensus 182 ~p~~~Y~~sK~~~E~~~~~~~~~~-----g~~~~ilRp~~v~ 218 (357)
T 2x6t_A 182 KPLNVFGYSKFLFDEYVRQILPEA-----NSQIVGFRYFNVY 218 (357)
T ss_dssp CCSSHHHHHHHHHHHHHHHHGGGC-----SSCEEEEEECEEE
T ss_pred CCCChhHHHHHHHHHHHHHHHHHc-----CCCEEEEecCeEE
Confidence 5689999999999998876541 3366777766554
|
| >2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.5e-11 Score=114.34 Aligned_cols=78 Identities=26% Similarity=0.430 Sum_probs=72.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 501 IEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 501 ~~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
....+++.+.+.|+++|++++++|+.+++|++||+|||++++|+++|++.||++++...+|++||+.+|++||.+++.
T Consensus 18 ~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~~~ 95 (99)
T 2liu_A 18 NLSEIKQVLKQQLAEALYTEESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQILS 95 (99)
T ss_dssp CHHHHHHHHHHHHHHHTTSCGGGCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHhh
Confidence 345678899999999999998899999999999999999999999999999999999999999999999999988654
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.22 E-value=3.8e-11 Score=135.97 Aligned_cols=136 Identities=16% Similarity=0.092 Sum_probs=82.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++++|||||+|+||.++++.|+++|. .|+++.|+... + . ++.+|++|.+++.++++.. ++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~----------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d 62 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRAR----------P-K--FEQVNLLDSNAVHHIIHDF-----QPH 62 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC-------------------------------CHHHHHHH-----CCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCC----------C-C--eEEecCCCHHHHHHHHHhh-----CCC
Confidence 46899999999999999999999986 55555665321 1 1 6789999999998888764 699
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC----------CCC
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG----------DFG 385 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g----------~~g 385 (1152)
.|||+||... . ..+.++++..+++|+.|+.++.+++.+. . ..||++||.+.+-+ ...
T Consensus 63 ~vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~-------~-~~~v~~SS~~v~~~~~~~~~E~~~~~~ 129 (315)
T 2ydy_A 63 VIVHCAAERR-P----DVVENQPDAASQLNVDASGNLAKEAAAV-------G-AFLIYISSDYVFDGTNPPYREEDIPAP 129 (315)
T ss_dssp EEEECC------------------------CHHHHHHHHHHHHH-------T-CEEEEEEEGGGSCSSSCSBCTTSCCCC
T ss_pred EEEECCcccC-h----hhhhcCHHHHHHHHHHHHHHHHHHHHHc-------C-CeEEEEchHHHcCCCCCCCCCCCCCCC
Confidence 9999999754 2 2356678899999999999999997542 2 27999999876543 234
Q ss_pred ChhhhHHHHHHHHHHHHH
Q psy616 386 SCDYAMGNRFQTVYAKYL 403 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~ 403 (1152)
...|+.+|.+++.+++..
T Consensus 130 ~~~Y~~sK~~~e~~~~~~ 147 (315)
T 2ydy_A 130 LNLYGKTKLDGEKAVLEN 147 (315)
T ss_dssp CSHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHh
Confidence 678999999999999875
|
| >2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.5e-11 Score=112.11 Aligned_cols=74 Identities=20% Similarity=0.307 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCc--eecccCCCHHHHHHHHHH
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMP--SIFFSYSTLERLITYFIK 575 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~--~~lf~~~Ti~~La~~L~~ 575 (1152)
...+++.+++.|+++|++++++|+.+++|++||+|||++++|+.+|+++||++++. ..+|++||+.+|++||.+
T Consensus 9 ~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~ 84 (89)
T 2kr5_A 9 SNEKLDAVMRVVSEESGIALEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLG 84 (89)
T ss_dssp CHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHCcCHHHCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHH
Confidence 45678889999999999998899999999999999999999999999999999999 999999999999999965
|
| >1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A | Back alignment and structure |
|---|
Probab=99.21 E-value=9.8e-12 Score=113.86 Aligned_cols=73 Identities=15% Similarity=0.240 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
...+++.|.++|+++|+++ +|+.+++||++|+|||++++|..+|++.||++++..++|++||+++|++++.+.
T Consensus 12 ~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 12 TNAVESKLAEIWERVLGVS--GIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp SSHHHHHHHHHHHHHHTCS--SCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHhCCC--CCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 3457788999999999985 799999999999999999999999999999999999999999999999998653
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=7.8e-11 Score=137.20 Aligned_cols=163 Identities=15% Similarity=0.199 Sum_probs=115.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKY-STNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~G-a~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||..+++.|+++| . .|+++.|+..... +.+. ...++.++.+|++|.+++.++++ .
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~--~~l~-~~~~v~~~~~Dl~d~~~l~~~~~-------~ 99 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVN-QVHVVDNLLSAEK--INVP-DHPAVRFSETSITDDALLASLQD-------E 99 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCS-EEEEECCCTTCCG--GGSC-CCTTEEEECSCTTCHHHHHHCCS-------C
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCc-eEEEEECCCCCch--hhcc-CCCceEEEECCCCCHHHHHHHhh-------C
Confidence 46789999999999999999999998 6 5555566532110 1111 14568899999999887765543 7
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCC-CCCEEEEecCCcccc-----------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN-KLDFVCYFSSSSAIL----------- 381 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~-~~~~iV~~SS~a~~~----------- 381 (1152)
+|.|||+||... . ..+.+++...+++|+.|+.++.+++ ... ....||++||.+.+-
T Consensus 100 ~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~-------~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E 167 (377)
T 2q1s_A 100 YDYVFHLATYHG-N----QSSIHDPLADHENNTLTTLKLYERL-------KHFKRLKKVVYSAAGCSIAEKTFDDAKATE 167 (377)
T ss_dssp CSEEEECCCCSC-H----HHHHHCHHHHHHHHTHHHHHHHHHH-------TTCSSCCEEEEEEEC--------------C
T ss_pred CCEEEECCCccC-c----hhhhhCHHHHHHHHHHHHHHHHHHH-------HHhCCCCeEEEeCCHHHcCCCCCCCcCccc
Confidence 999999999754 1 1234567889999999999999984 333 456899999975321
Q ss_pred -----CC-CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 382 -----GD-FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 382 -----g~-~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
+. .....|+.+|.+.+.+++....+. +.+++.+..+..-
T Consensus 168 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----gi~~~ilRp~~v~ 212 (377)
T 2q1s_A 168 ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH-----QLPTVRARFQNVY 212 (377)
T ss_dssp CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECCEE
T ss_pred ccccccccCCCCchHHHHHHHHHHHHHHHHHh-----CCCEEEEeeccEE
Confidence 11 345689999999999998765431 2366666665543
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.9e-11 Score=138.13 Aligned_cols=158 Identities=15% Similarity=0.083 Sum_probs=112.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++|||||+|+||.++++.|+++|.. |+++.|...... ......+.++.+|++|.+ +.+++ .. |.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-----~~~~~~~~~~~~Dl~d~~-~~~~~-------~~-d~ 65 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYE-VVVVDNLSSGRR-----EFVNPSAELHVRDLKDYS-WGAGI-------KG-DV 65 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEECCCSSCCG-----GGSCTTSEEECCCTTSTT-TTTTC-------CC-SE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCE-EEEEeCCCCCch-----hhcCCCceEEECccccHH-HHhhc-------CC-CE
Confidence 36899999999999999999999885 445555432110 111345788999999976 54332 23 99
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-----------CC
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-----------FG 385 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-----------~g 385 (1152)
|||+||... . ..+.+++...+++|+.|+.++.+++... ..+.||++||.+.+-.. ..
T Consensus 66 vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~-------~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p 133 (312)
T 3ko8_A 66 VFHFAANPE-V----RLSTTEPIVHFNENVVATFNVLEWARQT-------GVRTVVFASSSTVYGDADVIPTPEEEPYKP 133 (312)
T ss_dssp EEECCSSCS-S----SGGGSCHHHHHHHHHHHHHHHHHHHHHH-------TCCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred EEECCCCCC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHHc-------CCCEEEEeCcHHHhCCCCCCCCCCCCCCCC
Confidence 999999643 1 2344567788999999999999986432 35679999997654221 23
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
...|+.+|.+.+.+++....+. +.+++.+..+..-+
T Consensus 134 ~~~Y~~sK~~~e~~~~~~~~~~-----g~~~~~lrp~~v~g 169 (312)
T 3ko8_A 134 ISVYGAAKAAGEVMCATYARLF-----GVRCLAVRYANVVG 169 (312)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECEEEC
T ss_pred CChHHHHHHHHHHHHHHHHHHh-----CCCEEEEeeccccC
Confidence 5789999999999998876541 23777777765543
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-10 Score=134.73 Aligned_cols=160 Identities=13% Similarity=0.136 Sum_probs=116.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCC-CHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVS-DKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~-Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvs-d~~~v~~~~~~~~~~~G 312 (1152)
..+++|||||+|.||..+++.|+++ |. .|+++.|+.... ..+.. ...+.++.+|++ |.+.+.++++
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~---~~~~~-~~~v~~~~~Dl~~d~~~~~~~~~------- 90 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRL---GDLVK-HERMHFFEGDITINKEWVEYHVK------- 90 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTT---GGGGG-STTEEEEECCTTTCHHHHHHHHH-------
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhh---hhhcc-CCCeEEEeCccCCCHHHHHHHhc-------
Confidence 4678999999999999999999999 66 555555653211 11111 246889999999 9999888776
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC---------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD--------- 383 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~--------- 383 (1152)
.+|.|||+||... .. ...++....+++|+.|+.++.+++... . ..||++||.+ .+|.
T Consensus 91 ~~d~Vih~A~~~~-~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-------~-~~~v~~SS~~-vyg~~~~~~~~e~ 156 (372)
T 3slg_A 91 KCDVILPLVAIAT-PA----TYVKQPLRVFELDFEANLPIVRSAVKY-------G-KHLVFPSTSE-VYGMCADEQFDPD 156 (372)
T ss_dssp HCSEEEECBCCCC-HH----HHHHCHHHHHHHHTTTTHHHHHHHHHH-------T-CEEEEECCGG-GGBSCCCSSBCTT
T ss_pred cCCEEEEcCcccc-HH----HHhhCHHHHHHHHHHHHHHHHHHHHHh-------C-CcEEEeCcHH-HhCCCCCCCCCcc
Confidence 4899999999765 21 123455678899999999999986432 2 5799999954 3333
Q ss_pred ----------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 384 ----------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 384 ----------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
.....|+.+|...+.+++....+++ +++.+..+.+-+
T Consensus 157 ~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~------~~~ilRp~~v~G 203 (372)
T 3slg_A 157 ASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGL------NFTLFRPFNWIG 203 (372)
T ss_dssp TCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTC------EEEEEEECSEEC
T ss_pred ccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCC------CEEEEccccccC
Confidence 1233799999999999988765544 777777666544
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.4e-11 Score=141.14 Aligned_cols=165 Identities=19% Similarity=0.159 Sum_probs=110.0
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchH--HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS--IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~--~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++|||||+|+||.++++.|+++|..++++..+..... .....+. .+.++.++.+|++|.+++.++++ .
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~ 80 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------G 80 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------T
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------C
Confidence 578999999999999999999999986554444322211 1112332 23468889999999888776653 4
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC---------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 384 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~--------- 384 (1152)
+|+|||+|+... . . ..+..++.+++|+.|+.++.+++.+. ...+.||++||.+++.+.+
T Consensus 81 ~D~Vih~A~~~~-~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~------~~v~r~V~~SS~~~~~~~~~~~~~~~~~ 148 (338)
T 2rh8_A 81 CDFVFHVATPVH-F---A--SEDPENDMIKPAIQGVVNVMKACTRA------KSVKRVILTSSAAAVTINQLDGTGLVVD 148 (338)
T ss_dssp CSEEEEESSCCC-C--------------CHHHHHHHHHHHHHHHHC------TTCCEEEEECCHHHHHHHHHTCSCCCCC
T ss_pred CCEEEEeCCccC-C---C--CCCcHHHHHHHHHHHHHHHHHHHHHc------CCcCEEEEEecHHHeecCCcCCCCcccC
Confidence 799999998542 1 1 11122458999999999999986431 1256899999987432110
Q ss_pred ---------------CChhhhHHHHHHHHHHHHHHh-cccccCCCceEEEEeCCcccC
Q psy616 385 ---------------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 ---------------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+++|.+.+.++..... .++ +++.|..+...+
T Consensus 149 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi------~~~~lrp~~v~G 200 (338)
T 2rh8_A 149 EKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNI------DLITVIPTLMAG 200 (338)
T ss_dssp TTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHHTC------CEEEEEECEEES
T ss_pred hhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHcCC------cEEEEeCCceEC
Confidence 011599999999998876643 344 777777665543
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-09 Score=127.37 Aligned_cols=273 Identities=14% Similarity=0.147 Sum_probs=167.9
Q ss_pred CCCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC
Q psy616 706 EISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK 785 (1152)
Q Consensus 706 ~is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~ 785 (1152)
.+..+....++....|..+++.+||++||+++++++ .|++++..+ +. . ...+.++...+|++
T Consensus 84 ~~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId----~li~~t~t~-~~--------~-----p~~a~~v~~~LGl~ 145 (387)
T 3oit_A 84 SLDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTNSG-AH--------V-----PGVDFRLVPLLGLR 145 (387)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEESSC-CE--------E-----SCHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeCC-CC--------c-----ccHHHHHHHHhCCC
Confidence 345666666778889999999999999999998887 788887653 11 1 12577899999999
Q ss_pred CC---cccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCccccccc
Q psy616 786 GP---VMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAV 862 (1152)
Q Consensus 786 GP---s~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~ 862 (1152)
+. .+.+..+|+|++.||..|...|++|.++.+||+|++.+.. .+..++.+ .++.......+|+|+
T Consensus 146 ~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~----------~~~~~~d~--~~~~~~~~~lFGDGA 213 (387)
T 3oit_A 146 PSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLM----------YFTGPDEG--CFRTLLVQGLFGDGA 213 (387)
T ss_dssp TTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGG----------TCCCCCSS--SCHHHHHHHHBCCEE
T ss_pred CCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccch----------hccCcccc--chHhhhcccccccce
Confidence 84 6899999999999999999999999999999999998421 11222211 111112367899999
Q ss_pred EEEEEcccchhhcCCCceEEEEEEEEEecCC-CC--------CCC---CCCC-----HHHHHHHHHHHHHHc----CCCC
Q psy616 863 VAVVLKRLSRALSDGDPIHAIIRGSGINYDG-KT--------NGI---TAPN-----GISQTELIKSVYKKS----NLNP 921 (1152)
Q Consensus 863 ~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG-~~--------~~~---~~P~-----~~~q~~~i~~al~~A----gi~p 921 (1152)
+++||++.+... ...++-++........+ .. .++ ..+. .....++++++|+++ |++
T Consensus 214 aA~vl~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~- 290 (387)
T 3oit_A 214 AAVIVGADADDV--ERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG- 290 (387)
T ss_dssp EEEEEESSCCSS--CCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC------
T ss_pred EEEEEecCCCcc--cCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC-
Confidence 999998744111 12233333222221111 10 010 0122 234457788888888 987
Q ss_pred CCcc--EEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCC
Q psy616 922 EDIN--YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHC 998 (1152)
Q Consensus 922 ~dI~--yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~ 998 (1152)
|++ |+-.|-.+..+ ++++.+.++-...+ +... .+=...||+-+|+=...|-.+ ++. .+.+--
T Consensus 291 -d~d~~~~v~Hq~n~~i-----l~~v~~~Lgl~~ek---~~~s~~~l~~~GNtssAsip~~L~~~---~~~-~~~~G~-- 355 (387)
T 3oit_A 291 -GWNDLFWAVHPGSSTI-----MDQVDAALGLEPGK---LAASRRVLSDYGNMSGATVIFALDEL---RRQ-RKEAAA-- 355 (387)
T ss_dssp --GGGSEEEECCCCHHH-----HHHHHHHHTCCTTT---THHHHHHHHHHCBCGGGHHHHHHHHH---HHC---------
T ss_pred -cccccEEEECCCCHHH-----HHHHHHHcCCCHHH---HHHHHHHHHHhCchHHhHHHHHHHHH---HHh-hhccCC--
Confidence 555 99999665443 45555556532211 1111 122356999888766655442 122 121100
Q ss_pred CCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEcccc
Q psy616 999 EKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYI 1051 (1152)
Q Consensus 999 ~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~ 1051 (1152)
. .+.....++.+||.|-+-..++|+..+
T Consensus 356 --~-----------------------g~~~d~vll~~fG~G~t~~~~ll~~~~ 383 (387)
T 3oit_A 356 --A-----------------------GEWPELGVMMAFGPGMTVDAMLLHATS 383 (387)
T ss_dssp -----------------------------CCEEEEEEEETTTEEEEEEEEECC
T ss_pred --C-----------------------CCCCCEEEEEEecccceeeeeeeEecc
Confidence 0 001134578899999999999998654
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=8e-11 Score=131.75 Aligned_cols=132 Identities=18% Similarity=0.175 Sum_probs=104.0
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.+.+++|||||+|.||.++++.|+++|. .|+++.|+ .+|++|.+++.++++.. .
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~-----~ 63 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ--------------------DLDITNVLAVNKFFNEK-----K 63 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT--------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCC-eEEeccCc--------------------cCCCCCHHHHHHHHHhc-----C
Confidence 3568999999999999999999999986 56666664 27999999998888764 6
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC---------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 384 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~--------- 384 (1152)
+|.|||+||... . +.+.+++...+++|+.|+.++.+++.+. .. .||++||.+.+-+..
T Consensus 64 ~d~vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~-------~~-~iv~~SS~~v~~~~~~~~~~E~~~ 130 (292)
T 1vl0_A 64 PNVVINCAAHTA-V----DKCEEQYDLAYKINAIGPKNLAAAAYSV-------GA-EIVQISTDYVFDGEAKEPITEFDE 130 (292)
T ss_dssp CSEEEECCCCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHHH-------TC-EEEEEEEGGGSCSCCSSCBCTTSC
T ss_pred CCEEEECCccCC-H----HHHhcCHHHHHHHHHHHHHHHHHHHHHc-------CC-eEEEechHHeECCCCCCCCCCCCC
Confidence 999999999754 1 2235678899999999999999997542 23 799999986543322
Q ss_pred --CChhhhHHHHHHHHHHHHHH
Q psy616 385 --GSCDYAMGNRFQTVYAKYLN 404 (1152)
Q Consensus 385 --g~~~Yaaana~l~~la~~~~ 404 (1152)
....|+.+|...+.+++...
T Consensus 131 ~~~~~~Y~~sK~~~E~~~~~~~ 152 (292)
T 1vl0_A 131 VNPQSAYGKTKLEGENFVKALN 152 (292)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHC
T ss_pred CCCccHHHHHHHHHHHHHHhhC
Confidence 35689999999999997654
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.6e-10 Score=139.05 Aligned_cols=164 Identities=18% Similarity=0.166 Sum_probs=118.1
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHc---CCcEEEEecCCcchHHHHHHHHh----------------CCCcEEEEEec
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINK---YSTNLILSGRSKLNSIIYKKLKK----------------FNNKAIYIQVD 293 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~---Ga~~vil~~R~~~~~~~~~~l~~----------------~g~~v~~~~~D 293 (1152)
..+++++|||||+|+||.++++.|+++ |. +|+++.|+.......+.+++ .+.++.++.+|
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~-~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDG-RLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTC-EEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCC-EEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 346899999999999999999999999 55 66666676544433333322 13579999999
Q ss_pred CC------CHHHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCC
Q psy616 294 VS------DKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK 367 (1152)
Q Consensus 294 vs------d~~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~ 367 (1152)
++ |.+++.++++ .+|.||||||... . +.+...+.+|+.|+.++.+++ ....
T Consensus 149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~-~--------~~~~~~~~~Nv~gt~~ll~aa-------~~~~ 205 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVN-A--------FPYHELFGPNVAGTAELIRIA-------LTTK 205 (478)
T ss_dssp TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCS-B--------SSCCEEHHHHHHHHHHHHHHH-------TSSS
T ss_pred CCCcccCCCHHHHHHHHc-------CCCEEEECccccC-C--------cCHHHHHHHHHHHHHHHHHHH-------HhCC
Confidence 98 6666666654 4899999999865 2 123457889999999999985 3334
Q ss_pred CCEEEEecCCccccCCCCC-----------------------hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 368 LDFVCYFSSSSAILGDFGS-----------------------CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 368 ~~~iV~~SS~a~~~g~~g~-----------------------~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
...||++||.+. .+.... ..|+.+|...+.+++....+. +.+++.+..+.+
T Consensus 206 ~~~~V~iSS~~v-~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----gi~~~ivRpg~v 279 (478)
T 4dqv_A 206 LKPFTYVSTADV-GAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC-----ALPVAVFRCGMI 279 (478)
T ss_dssp CCCEEEEEEGGG-GTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECEE
T ss_pred CCeEEEEeehhh-cCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh-----CCCeEEEECcee
Confidence 567999999654 332111 339999999999998876531 237778887766
Q ss_pred cC
Q psy616 425 NN 426 (1152)
Q Consensus 425 ~~ 426 (1152)
-+
T Consensus 280 ~G 281 (478)
T 4dqv_A 280 LA 281 (478)
T ss_dssp EC
T ss_pred eC
Confidence 43
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.7e-10 Score=145.39 Aligned_cols=167 Identities=19% Similarity=0.214 Sum_probs=115.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||.++++.|+++|..++++..+........+.++. .+.++.++.+|++|.+++.++++.. +
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-----~ 84 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----K 84 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-----C
Confidence 468999999999999999999999997554444333322222233322 1345778999999999998887653 6
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC----------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---------- 383 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~---------- 383 (1152)
+|.|||+||... .... .+.....+++|+.|+.++.+++.. ...+.||++||.+.+ |.
T Consensus 85 ~D~Vih~A~~~~-~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~-------~~~~~iV~~SS~~vy-g~~~~~~~~~~~ 151 (699)
T 1z45_A 85 IDSVIHFAGLKA-VGES----TQIPLRYYHNNILGTVVLLELMQQ-------YNVSKFVFSSSATVY-GDATRFPNMIPI 151 (699)
T ss_dssp CCEEEECCSCCC-HHHH----HHSHHHHHHHHHHHHHHHHHHHHH-------HTCCEEEEEEEGGGG-CCGGGSTTCCSB
T ss_pred CCEEEECCcccC-cCcc----ccCHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEECcHHHh-CCCccccccCCc
Confidence 999999999754 2211 223356789999999999887532 135679999997643 21
Q ss_pred ------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCC
Q psy616 384 ------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWP 422 (1152)
Q Consensus 384 ------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg 422 (1152)
.....|+.+|.+++.+++....+. ..+.+++.+..+
T Consensus 152 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~g~~~~ilR~~ 193 (699)
T 1z45_A 152 PEECPLGPTNPYGHTKYAIENILNDLYNSD---KKSWKFAILRYF 193 (699)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---TTSCEEEEEEEC
T ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHhc---cCCCcEEEEEec
Confidence 124689999999999998775531 012366666543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3.3e-10 Score=129.68 Aligned_cols=160 Identities=12% Similarity=0.055 Sum_probs=111.0
Q ss_pred CEEEEECCchhHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCC-HHHHHHHHHHHHhhcCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSD-KLKMISEINSIINNIGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~-Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd-~~~v~~~~~~~~~~~G~i 314 (1152)
+++|||||+|+||.++++.|+++ |. .|+++.|+.... ..+. ....+.++.+|++| .+.++++++ .+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~---~~~~-~~~~~~~~~~D~~~~~~~~~~~~~-------~~ 68 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAI---SRFL-NHPHFHFVEGDISIHSEWIEYHVK-------KC 68 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGG---GGGT-TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcchH---HHhh-cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence 36899999999999999999998 65 555556654221 1111 13468899999998 455666654 47
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC---------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG--------- 385 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g--------- 385 (1152)
|.|||+||... ... ..+++...+++|+.|+.++.+++.. .. ..||++||.+.+-...+
T Consensus 69 d~vih~A~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-------~~-~~~v~~SS~~v~g~~~~~~~~e~~~~ 135 (345)
T 2bll_A 69 DVVLPLVAIAT-PIE----YTRNPLRVFELDFEENLRIIRYCVK-------YR-KRIIFPSTSEVYGMCSDKYFDEDHSN 135 (345)
T ss_dssp SEEEECBCCCC-HHH----HHHSHHHHHHHHTHHHHHHHHHHHH-------TT-CEEEEECCGGGGBTCCCSSBCTTTCC
T ss_pred CEEEEcccccC-ccc----hhcCHHHHHHHHHHHHHHHHHHHHH-------hC-CeEEEEecHHHcCCCCCCCcCCcccc
Confidence 99999999754 211 1345677899999999999988642 23 67999999765422111
Q ss_pred ---------ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 386 ---------SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 386 ---------~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
...|+.+|...+.+++....+. +.+++.+..+..-+
T Consensus 136 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~v~G 180 (345)
T 2bll_A 136 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-----GLQFTLFRPFNWMG 180 (345)
T ss_dssp CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECSEEC
T ss_pred cccCcccCcccccHHHHHHHHHHHHHHHHhc-----CCCEEEEcCCcccC
Confidence 1279999999999998765431 23677777665543
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=1e-10 Score=131.77 Aligned_cols=160 Identities=14% Similarity=0.135 Sum_probs=111.5
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
+|||||+|+||.++++.|+++|...|+++.|+..... ...+.. .. +.+|++|.+.++++++... ++++|.||
T Consensus 2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~--~~---~~~d~~~~~~~~~~~~~~~--~~~~d~vi 73 (310)
T 1eq2_A 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVD--LN---IADYMDKEDFLIQIMAGEE--FGDVEAIF 73 (310)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHHHHT--SC---CSEEEEHHHHHHHHHTTCC--CSSCCEEE
T ss_pred EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-hhhcCc--ce---eccccccHHHHHHHHhccc--cCCCcEEE
Confidence 7999999999999999999998345555566543211 112222 22 6789999888777664211 34799999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-----------Ch
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-----------SC 387 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g-----------~~ 387 (1152)
|+||... . +.+++...+++|+.|+.++.+++... .. .||++||.+.+-+..+ ..
T Consensus 74 ~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~a~~~~-------~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~ 138 (310)
T 1eq2_A 74 HEGACSS-T------TEWDGKYMMDNNYQYSKELLHYCLER-------EI-PFLYASSAATYGGRTSDFIESREYEKPLN 138 (310)
T ss_dssp ECCSCCC-T------TCCCHHHHHHHTHHHHHHHHHHHHHH-------TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSS
T ss_pred ECccccc-C------cccCHHHHHHHHHHHHHHHHHHHHHc-------CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCC
Confidence 9999755 2 22346778999999999999986542 23 6999999764322222 46
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
.|+.+|...+.+++....+ .+.+++.+..+..-+
T Consensus 139 ~Y~~sK~~~e~~~~~~~~~-----~g~~~~~lrp~~v~G 172 (310)
T 1eq2_A 139 VYGYSKFLFDEYVRQILPE-----ANSQIVGFRYFNVYG 172 (310)
T ss_dssp HHHHHHHHHHHHHHHHGGG-----CSSCEEEEEECEEES
T ss_pred hhHHHHHHHHHHHHHHHHH-----cCCCEEEEeCCcEEC
Confidence 7999999999999877643 134677777665543
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.5e-10 Score=129.07 Aligned_cols=151 Identities=23% Similarity=0.213 Sum_probs=110.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++|||||+|.||..+++.|+++|.. |+.+.|++.... +. .+.++.+|++ .+++.++++ .+|.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~----~~----~~~~~~~Dl~-~~~~~~~~~-------~~d~ 65 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNT-PIILTRSIGNKA----IN----DYEYRVSDYT-LEDLINQLN-------DVDA 65 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCCC-------------CCEEEECCCC-HHHHHHHTT-------TCSE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCE-EEEEeCCCCccc----CC----ceEEEEcccc-HHHHHHhhc-------CCCE
Confidence 67999999999999999999999874 555555532222 22 5788999999 888776654 6999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------------ 384 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------------ 384 (1152)
|||+||... .. +....+++|+.|+.++.+++.. .....||++||.+. +|..
T Consensus 66 Vih~a~~~~-~~--------~~~~~~~~n~~~~~~ll~a~~~-------~~~~r~v~~SS~~v-yg~~~~~~~~E~~~~~ 128 (311)
T 3m2p_A 66 VVHLAATRG-SQ--------GKISEFHDNEILTQNLYDACYE-------NNISNIVYASTISA-YSDETSLPWNEKELPL 128 (311)
T ss_dssp EEECCCCCC-SS--------SCGGGTHHHHHHHHHHHHHHHH-------TTCCEEEEEEEGGG-CCCGGGCSBCTTSCCC
T ss_pred EEEccccCC-CC--------ChHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEEccHHH-hCCCCCCCCCCCCCCC
Confidence 999999865 32 3445778999999999998532 24567999999544 3332
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+.+|...+.+++....+ .+.+++.+..+..-+
T Consensus 129 p~~~Y~~sK~~~E~~~~~~~~~-----~g~~~~ilRp~~v~G 165 (311)
T 3m2p_A 129 PDLMYGVSKLACEHIGNIYSRK-----KGLCIKNLRFAHLYG 165 (311)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHH-----SCCEEEEEEECEEEC
T ss_pred CCchhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCceeC
Confidence 2468999999999998877653 123777777665543
|
| >2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A | Back alignment and structure |
|---|
Probab=99.12 E-value=5.5e-11 Score=107.57 Aligned_cols=69 Identities=22% Similarity=0.288 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhCCC-CcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 507 NDIKNHICNILNTK-KSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 507 ~~l~~~ia~~L~~~-~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
..+++.++++|+++ +++|+++.+|.+||+||||++||+++|++.||++||.+++|. +|+.+|++++...
T Consensus 9 ~~v~~~va~iLg~~~~~~I~~~~~l~dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~-~Ti~~La~~v~~~ 78 (91)
T 2cg5_B 9 RDLVEAVAHILGIRDLAAVNLDSSLADLGLDALMSVEVRQTLERELNLVLSVREVRQ-LTLRKLQELSSKA 78 (91)
T ss_dssp TTHHHHHHHHTTCCSCTTSCTTSBTTTTTCCHHHHHHHHHHHHHHHCCCCCHHHHHT-CBHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCchhhCCCCCCHHHhCCcchHHHHHHHHHHHHHCCCCCHHHHHh-CCHHHHHHHHhcc
Confidence 35889999999996 589999999999999999999999999999999999999988 6999999988653
|
| >2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C* | Back alignment and structure |
|---|
Probab=99.12 E-value=8.5e-11 Score=105.38 Aligned_cols=76 Identities=12% Similarity=0.117 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHhCCCCc-ccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 503 KFIENDIKNHICNILNTKKS-EIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~-~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
+.+.+.++++|+++++++++ +|+++.+|++||+|||++++|..+|+++||++++...+++++|+.+|++|+.++..
T Consensus 3 ~~i~~~l~~i~~~~l~~~~~~~i~~~~~l~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 79 (82)
T 2ava_A 3 KETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLE 79 (82)
T ss_dssp HHHHHHHHHHHHHHTTCSSSSCCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCCCchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHh
Confidence 34677899999999999876 89999999999999999999999999999999999999999999999999987643
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.1e-10 Score=124.41 Aligned_cols=177 Identities=11% Similarity=0.050 Sum_probs=108.8
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+++|||||+|+||+++++.|+++|..+|+++.|++... .+ .....+.++.+|++|+++++++++ .+|
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~---~~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 90 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI---HK--PYPTNSQIIMGDVLNHAALKQAMQ-------GQD 90 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS---CS--SCCTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh---cc--cccCCcEEEEecCCCHHHHHHHhc-------CCC
Confidence 478999999999999999999999944666667764211 00 123468899999999999888775 579
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC---------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS--------- 386 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~--------- 386 (1152)
.||||||... . ....+.+++.|++ ...+.||++||+....+.++.
T Consensus 91 ~vv~~a~~~~-~----------------------~~~~~~~~~~~~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~ 144 (236)
T 3qvo_A 91 IVYANLTGED-L----------------------DIQANSVIAAMKA---CDVKRLIFVLSLGIYDEVPGKFVEWNNAVI 144 (236)
T ss_dssp EEEEECCSTT-H----------------------HHHHHHHHHHHHH---TTCCEEEEECCCCC----------------
T ss_pred EEEEcCCCCc-h----------------------hHHHHHHHHHHHH---cCCCEEEEEecceecCCCCcccccchhhcc
Confidence 9999998522 0 0123345555543 245689999998876655542
Q ss_pred ----hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHH
Q psy616 387 ----CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 387 ----~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l 462 (1152)
..|..++.. ++.. +++++.|.+|.+.+.. ......... .....-..+++++..+++..++
T Consensus 145 ~~~~~~~~~~~~~-------l~~~------gi~~~~vrPg~i~~~~-~~~~~~~~~--~~~~~~~~i~~~DvA~~i~~ll 208 (236)
T 3qvo_A 145 GEPLKPFRRAADA-------IEAS------GLEYTILRPAWLTDED-IIDYELTSR--NEPFKGTIVSRKSVAALITDII 208 (236)
T ss_dssp CGGGHHHHHHHHH-------HHTS------CSEEEEEEECEEECCS-CCCCEEECT--TSCCSCSEEEHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHH-------HHHC------CCCEEEEeCCcccCCC-CcceEEecc--CCCCCCcEECHHHHHHHHHHHH
Confidence 233333322 2333 3488888887664421 111000000 0000113478999999999998
Q ss_pred hcCc
Q psy616 463 IQDK 466 (1152)
Q Consensus 463 ~~~~ 466 (1152)
..+.
T Consensus 209 ~~~~ 212 (236)
T 3qvo_A 209 DKPE 212 (236)
T ss_dssp HSTT
T ss_pred cCcc
Confidence 7654
|
| >2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.11 E-value=4.6e-11 Score=111.68 Aligned_cols=76 Identities=13% Similarity=0.229 Sum_probs=69.2
Q ss_pred hhHHHHHHHHHHHHHHhC-CCCcccccCCCccccCCchHHHHHHHHHHHHhcC-cccCceecccCCCHHHHHHHHHHhhh
Q psy616 501 IEKFIENDIKNHICNILN-TKKSEIYKNKNLADYGFDSISLAEFSRILSKFYS-LDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 501 ~~~~~~~~l~~~ia~~L~-~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fg-v~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
++..++..|.++|+++|+ . +.|+++++||++|+|||++++|..+|+++|+ ++++..+||++||+.+||++|.+++.
T Consensus 22 ~~~~~E~~La~iW~~vL~~~--~~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~~~ 99 (110)
T 2cq8_A 22 AELVTAEAVRSVWQRILPKV--LEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKLR 99 (110)
T ss_dssp THHHHHHHHHHHHHHHCSSC--SCCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCCC--CCCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHHhc
Confidence 345688899999999998 5 4689999999999999999999999999999 99999999999999999999987654
|
| >1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1e-10 Score=103.70 Aligned_cols=72 Identities=25% Similarity=0.334 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.+.+++.|++++++++++|+++++|+ ++|+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 4 i~~~l~~~~~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 76 (78)
T 1l0i_A 4 IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGH 76 (78)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHh
Confidence 567899999999999989999999996 999999999999999999999999999999999999999999764
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=3.6e-10 Score=128.13 Aligned_cols=150 Identities=14% Similarity=0.075 Sum_probs=110.2
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++++|||||+|.||..+++.|+++|.. |+++.|+. .+|++|.+++.++++.. .+|
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~-v~~~~r~~-------------------~~D~~d~~~~~~~~~~~-----~~d 57 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDV-ELVLRTRD-------------------ELNLLDSRAVHDFFASE-----RID 57 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTE-EEECCCTT-------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEecCc-------------------cCCccCHHHHHHHHHhc-----CCC
Confidence 467999999999999999999999875 44455542 27999999998887754 689
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-------------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------------- 382 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g------------- 382 (1152)
.|||+||... .. ....++....+++|+.|+.++.+++.. .....||++||...+-+
T Consensus 58 ~vih~a~~~~-~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~-------~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~ 126 (321)
T 1e6u_A 58 QVYLAAAKVG-GI---VANNTYPADFIYQNMMIESNIIHAAHQ-------NDVNKLLFLGSSCIYPKLAKQPMAESELLQ 126 (321)
T ss_dssp EEEECCCCCC-CH---HHHHHCHHHHHHHHHHHHHHHHHHHHH-------TTCCEEEEECCGGGSCTTCCSSBCGGGTTS
T ss_pred EEEEcCeecC-Cc---chhhhCHHHHHHHHHHHHHHHHHHHHH-------hCCCeEEEEccHHHcCCCCCCCcCcccccc
Confidence 9999998753 11 122345677899999999999998643 24568999999765421
Q ss_pred ---CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 383 ---DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 383 ---~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
.+....|+.+|...+.+++....+. +.+++.+..+.+-+
T Consensus 127 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilrp~~v~G 168 (321)
T 1e6u_A 127 GTLEPTNEPYAIAKIAGIKLCESYNRQY-----GRDYRSVMPTNLYG 168 (321)
T ss_dssp SCCCGGGHHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECEEES
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHh-----CCCEEEEEeCCcCC
Confidence 1113589999999999988765431 23777777665543
|
| >2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-10 Score=102.93 Aligned_cols=73 Identities=21% Similarity=0.327 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
+++.+++.|++++++++++|+++.+| +++|+|||.+++|..+|+++||++++...+++++|+++|++|+.++.
T Consensus 2 i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~~ 75 (77)
T 2ehs_A 2 LEERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKV 75 (77)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHHh
Confidence 45678999999999998899999999 99999999999999999999999999999999999999999997653
|
| >2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str} | Back alignment and structure |
|---|
Probab=99.09 E-value=2e-10 Score=102.62 Aligned_cols=74 Identities=22% Similarity=0.281 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.+.+.+++.|++++++++++|+++.+|+ ++|+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 5 ~~i~~~l~~ii~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 79 (81)
T 2lol_A 5 DKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKER 79 (81)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHh
Confidence 45778899999999999988999999995 999999999999999999999999999999999999999999764
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=7.7e-10 Score=126.86 Aligned_cols=157 Identities=16% Similarity=0.066 Sum_probs=106.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||..+++.|+++|..++ ++.|... .......+. ...++.++.+|+++. .+..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~~~ 91 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVT-VVDNFFTGRKRNVEHWI-GHENFELINHDVVEP------------LYIE 91 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEECCSSCCGGGTGGGT-TCTTEEEEECCTTSC------------CCCC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEE-EEeCCCccchhhhhhhc-cCCceEEEeCccCCh------------hhcC
Confidence 568999999999999999999999987544 4455421 111111111 134688999999874 2467
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc------------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL------------ 381 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~------------ 381 (1152)
+|.|||+||... .... . +++...+++|+.|+.++.+++... .. .||++||.+.+-
T Consensus 92 ~d~vih~A~~~~-~~~~-~---~~~~~~~~~n~~~~~~l~~a~~~~-------~~-~~v~~SS~~v~g~~~~~~~~E~~~ 158 (343)
T 2b69_A 92 VDQIYHLASPAS-PPNY-M---YNPIKTLKTNTIGTLNMLGLAKRV-------GA-RLLLASTSEVYGDPEVHPQSEDYW 158 (343)
T ss_dssp CSEEEECCSCCS-HHHH-T---TCHHHHHHHHHHHHHHHHHHHHHH-------TC-EEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred CCEEEECccccC-chhh-h---hCHHHHHHHHHHHHHHHHHHHHHh-------CC-cEEEECcHHHhCCCCCCCCccccc
Confidence 999999999754 2111 1 234678899999999999986532 22 699999965431
Q ss_pred ----CCCCChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcc
Q psy616 382 ----GDFGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 382 ----g~~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 424 (1152)
+......|+.+|.+.+.+++....+ ++ +++.+..+..
T Consensus 159 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~------~~~ilrp~~v 200 (343)
T 2b69_A 159 GHVNPIGPRACYDEGKRVAETMCYAYMKQEGV------EVRVARIFNT 200 (343)
T ss_dssp CBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECCE
T ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHhCC------cEEEEEEcce
Confidence 1123467999999999998876543 33 5666665444
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.07 E-value=3.7e-10 Score=126.02 Aligned_cols=129 Identities=17% Similarity=0.174 Sum_probs=100.9
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
++|||||+|+||.++++.|+++|. .|+.+.| .++|++|.+++.++++.. ++|.|
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r--------------------~~~D~~d~~~~~~~~~~~-----~~d~v 60 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDK--------------------KLLDITNISQVQQVVQEI-----RPHII 60 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECT--------------------TTSCTTCHHHHHHHHHHH-----CCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecc--------------------cccCCCCHHHHHHHHHhc-----CCCEE
Confidence 799999999999999999999986 5666666 238999999999888765 68999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-----------CC
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-----------GS 386 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-----------g~ 386 (1152)
||+||... .. ...+++...+++|+.|+.++.+++... .. .||++||.+.+-+.. ..
T Consensus 61 i~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~ 127 (287)
T 3sc6_A 61 IHCAAYTK-VD----QAEKERDLAYVINAIGARNVAVASQLV-------GA-KLVYISTDYVFQGDRPEGYDEFHNPAPI 127 (287)
T ss_dssp EECCCCCC-HH----HHTTCHHHHHHHHTHHHHHHHHHHHHH-------TC-EEEEEEEGGGSCCCCSSCBCTTSCCCCC
T ss_pred EECCcccC-hH----HHhcCHHHHHHHHHHHHHHHHHHHHHc-------CC-eEEEEchhhhcCCCCCCCCCCCCCCCCC
Confidence 99999765 21 112457789999999999999997542 22 599999976543321 25
Q ss_pred hhhhHHHHHHHHHHHHHHh
Q psy616 387 CDYAMGNRFQTVYAKYLNN 405 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~~~ 405 (1152)
..|+.+|...+.+++....
T Consensus 128 ~~Y~~sK~~~E~~~~~~~~ 146 (287)
T 3sc6_A 128 NIYGASKYAGEQFVKELHN 146 (287)
T ss_dssp SHHHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHHHHhCC
Confidence 6899999999999876543
|
| >2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.1e-10 Score=101.60 Aligned_cols=74 Identities=15% Similarity=0.219 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.+.+.+.+.|++++++++++|+++.+|+ ++|+|||.+++|..+|+++||++++...+++++|+.+|++|+.++
T Consensus 6 ~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (82)
T 2cnr_A 6 EEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDH 80 (82)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHH
Confidence 45778899999999999988999999995 999999999999999999999999999999999999999999764
|
| >1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.8e-10 Score=102.50 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.+.+.+.+.|++++++++++|+++.+| .++|+|||.+++|..+|+++||++++...+++++|+.+|++|+.++
T Consensus 4 ~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 78 (80)
T 1x3o_A 4 QEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAK 78 (80)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHH
Confidence 4567889999999999998899999999 9999999999999999999999999999999999999999999765
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.02 E-value=1.5e-09 Score=121.35 Aligned_cols=186 Identities=20% Similarity=0.247 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccccccchhH
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSS 798 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCsSs 798 (1152)
..|..+++.+||++||+++++++ .+++|+.... . +.+..+...+ .-|.+.|..+|||+
T Consensus 56 sdLa~~Aa~~AL~~AGi~~~DID----~II~gt~t~q----~------------~~A~~va~~L--gipafdV~~ACsg~ 113 (347)
T 3lma_A 56 RKLMEDAVQSALSKQNLKKEDID----IFLAGDLLNQ----N------------VTANYVARHL--KIPFLCLFGACSTS 113 (347)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCS----EEEEEESSSS----S------------TTHHHHHHHH--CCCEEEBCCSTTHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCc----h------------hHHHHHHHHh--CCCEEEecChhHHH
Confidence 56889999999999999999988 7888865431 0 1233444454 34899999999999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCCC
Q psy616 799 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGD 878 (1152)
Q Consensus 799 l~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd 878 (1152)
+.||..|...|++|.++.+||+|++.+.+......+. ..-+..+|... -..+.|+|++||.+.. .+
T Consensus 114 ~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p-----~e~g~q~p~ta----~~t~dGAGA~VL~~~g----~~- 179 (347)
T 3lma_A 114 MESIAISSALIDGGFAKRALAATSSHNATAERQFRYP-----TEYGGQKPGTA----TSTVTGSGAVVLSQQP----GG- 179 (347)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC-------------------------CCCEEEEEEEESSC----CS-
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCc-----chhcccCCchh----cEEccceeEEEEEecC----CC-
Confidence 9999999999999999999999999754321100000 00111223222 1234799999998532 12
Q ss_pred ceEEEEEEEEEecCCC--CCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHH--HHHH
Q psy616 879 PIHAIIRGSGINYDGK--TNGITAPN------GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINA--LHDV 948 (1152)
Q Consensus 879 ~i~avI~g~a~~~dG~--~~~~~~P~------~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~a--l~~~ 948 (1152)
..|++..+ |+ ..++..|+ .++-.+.|++.|+++|++|+|+|||-+ ||.-++.. +.++
T Consensus 180 ---p~I~~~t~---Gkvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivt-------gdL~q~g~~il~~l 246 (347)
T 3lma_A 180 ---IKITSATV---GRVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILT-------GDLSGVGSPILKDL 246 (347)
T ss_dssp ---EEEEEEEC---CCCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEE-------ESCHHHHHHHHHHH
T ss_pred ---Cceeeeee---eeeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEec-------CChHHHHHHHHHHH
Confidence 23444332 43 23445554 234457789999999999999999998 46666654 7777
Q ss_pred hcccC
Q psy616 949 FKNKT 953 (1152)
Q Consensus 949 f~~~~ 953 (1152)
+.+..
T Consensus 247 ~~~~g 251 (347)
T 3lma_A 247 LKEEG 251 (347)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 76543
|
| >3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=3.6e-10 Score=101.05 Aligned_cols=75 Identities=29% Similarity=0.390 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
+.+.+.+++.+++++++++++|+++.+|+ +||+|||.+++|...|+++||++++...+++++|+.+|++|+.++.
T Consensus 4 ~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 79 (81)
T 3gzm_A 4 KSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNN 79 (81)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCcCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHh
Confidence 45778899999999999999999999995 9999999999999999999999999999999999999999998764
|
| >2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.7e-10 Score=101.23 Aligned_cols=75 Identities=16% Similarity=0.279 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
.+.+.+.+++.+++++++++++|+++.+| .+||+|||.+++|..+|+++||++++...+++++|+.+|++|+.++
T Consensus 5 ~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (82)
T 2qnw_A 5 DRPLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKA 80 (82)
T ss_dssp SHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHh
Confidence 34577889999999999998999999999 6999999999999999999999999999999999999999999765
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.01 E-value=2.4e-09 Score=119.31 Aligned_cols=182 Identities=16% Similarity=0.095 Sum_probs=118.0
Q ss_pred CEEEEECCchhHHHHHHHHHHHc--CCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 237 GTYLITGGTGRLGMLFSDYLINK--YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~--Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++|||||+|+||..+++.|+++ |..++++.++....+ .+... .+.++.+|++|.+++.++++ .+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~l~~~--~~~~~~~D~~d~~~l~~~~~-------~~ 67 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS----TLADQ--GVEVRHGDYNQPESLQKAFA-------GV 67 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH----HHHHT--TCEEEECCTTCHHHHHHHTT-------TC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh----HHhhc--CCeEEEeccCCHHHHHHHHh-------cC
Confidence 35899999999999999999998 876555544333222 22222 46788999999988877654 48
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|.|||+||... . + .+|+.++.++.+++.. .....||++||.... . ....|+.+|.
T Consensus 68 d~vi~~a~~~~-~--------~------~~n~~~~~~l~~a~~~-------~~~~~~v~~Ss~~~~-~--~~~~y~~~K~ 122 (287)
T 2jl1_A 68 SKLLFISGPHY-D--------N------TLLIVQHANVVKAARD-------AGVKHIAYTGYAFAE-E--SIIPLAHVHL 122 (287)
T ss_dssp SEEEECCCCCS-C--------H------HHHHHHHHHHHHHHHH-------TTCSEEEEEEETTGG-G--CCSTHHHHHH
T ss_pred CEEEEcCCCCc-C--------c------hHHHHHHHHHHHHHHH-------cCCCEEEEECCCCCC-C--CCCchHHHHH
Confidence 99999998522 1 1 4678899999888532 245689999998764 2 3358999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc--h---hHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT--D---FYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~--~---~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
..+.+.+. .++ +++.+..+.+.+.++........ . ..........+..++..+++..++..+
T Consensus 123 ~~E~~~~~---~~~------~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 189 (287)
T 2jl1_A 123 ATEYAIRT---TNI------PYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE 189 (287)
T ss_dssp HHHHHHHH---TTC------CEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred HHHHHHHH---cCC------CeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC
Confidence 99988752 333 66666665443322110000000 0 000011234577888888888877653
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.2e-10 Score=122.33 Aligned_cols=75 Identities=16% Similarity=0.331 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
+.+++.|++.|+++|++++++|+.+++|++||+|||++++|+++|++.||++|+.+.+|++|||.+|++||.+..
T Consensus 25 ~~i~~~l~~~~a~~l~~~~~~i~~~~~f~~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~~~~ 99 (212)
T 2l22_A 25 DECAQFLRQSLAAMLYCEPGQIRDGSRFLELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVGTQL 99 (212)
T ss_dssp THHHHHHHHHHHHHTTCCTTSCCTTCBHHHHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHCcCHHHcCCCCCHHHhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHhc
Confidence 457888999999999999999999999999999999999999999999999999999999999999999998754
|
| >2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=3.8e-10 Score=104.98 Aligned_cols=76 Identities=12% Similarity=0.146 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
.+.+.+.+.+.|++++++++++|+++.+|+ +||+|||.+++|..+|+++||++++...+++++||.+|++|+.++.
T Consensus 13 ~~~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 89 (99)
T 2dnw_A 13 LEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKK 89 (99)
T ss_dssp HHHHHHHHHHHHHHCTTSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhCCCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHHh
Confidence 345778899999999999989999999995 9999999999999999999999999999999999999999998764
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-09 Score=122.40 Aligned_cols=153 Identities=14% Similarity=0.054 Sum_probs=107.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++|||||+|.||..+++.|+++|. +... ....+.++.+|++|.+++.++++.. ++
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~~~~----------~~~~~~~~~~D~~d~~~~~~~~~~~-----~~ 62 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG-------LPGE----------DWVFVSSKDADLTDTAQTRALFEKV-----QP 62 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC-------CTTC----------EEEECCTTTCCTTSHHHHHHHHHHS-----CC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC-------cccc----------cccccCceecccCCHHHHHHHHhhc-----CC
Confidence 468899999999999999999999987 1100 0012334578999999998888753 69
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD----------- 383 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~----------- 383 (1152)
|.|||+|+... .... +.++....+++|+.|+.++.+++.. .....||++||.+.+ |.
T Consensus 63 d~Vih~A~~~~-~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~-------~~~~~~v~~SS~~vy-g~~~~~~~~E~~~ 130 (319)
T 4b8w_A 63 THVIHLAAMVG-GLFR---NIKYNLDFWRKNVHMNDNVLHSAFE-------VGARKVVSCLSTCIF-PDKTTYPIDETMI 130 (319)
T ss_dssp SEEEECCCCCC-CHHH---HTTCHHHHHHHHHHHHHHHHHHHHH-------TTCSEEEEECCGGGS-CSSCCSSBCGGGG
T ss_pred CEEEECceecc-cccc---cccCHHHHHHHHHHHHHHHHHHHHH-------cCCCeEEEEcchhhc-CCCCCCCcccccc
Confidence 99999999754 2111 2234456789999999999998532 245689999998543 32
Q ss_pred ------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 384 ------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 384 ------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
+....|+.+|...+.+++...++. +.+++.+..+..-+
T Consensus 131 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilRp~~v~G 174 (319)
T 4b8w_A 131 HNGPPHNSNFGYSYAKRMIDVQNRAYFQQY-----GCTFTAVIPTNVFG 174 (319)
T ss_dssp GBSCCCSSSHHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECEEEC
T ss_pred ccCCCCCCcchHHHHHHHHHHHHHHHHHhh-----CCCEEEEeeccccC
Confidence 122259999999999988765431 23677776655443
|
| >2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi} | Back alignment and structure |
|---|
Probab=99.00 E-value=7.2e-10 Score=99.77 Aligned_cols=75 Identities=19% Similarity=0.299 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
++.+.+.+++.+++++++++++|+++.+| .+||+|||.+++|..+|+++||++++...+++++|+.+|++|+.++
T Consensus 7 ~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 82 (84)
T 2kwl_A 7 NDEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKR 82 (84)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHH
Confidence 34577889999999999998999999999 9999999999999999999999999999999999999999999765
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-08 Score=120.20 Aligned_cols=264 Identities=14% Similarity=0.086 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-C-cccc-ccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-P-VMAI-NTA 794 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-P-s~tv-dta 794 (1152)
...|..+++.+||++||+++++++ .|++++.. ++. . ...+.+|...||+++ + .+.| ..+
T Consensus 110 a~~La~~Aa~~AL~~agi~~~dId----~li~~t~t-~~~--------~-----P~~a~~v~~~LGl~~~~~~~dv~~~~ 171 (465)
T 3e1h_A 110 GVPLAVEASRKAMAEARLVPAQIT----HMVSTTCT-DSA--------N-----PGYDHYVAKELGLSDRLEKVLLHGIG 171 (465)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGCC----EEEEECSS-CCC--------S-----SCHHHHHHHHHTCCTTCEEEEECSCG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeC-CCC--------C-----CcHHHHHHHHhCCCCCeeEEEecCCc
Confidence 357899999999999999998887 67787655 321 1 124778999999987 3 4777 799
Q ss_pred chhHHHHHHHHHHHHHc----CCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEccc
Q psy616 795 CSSSLVATHIACQSLRQ----HECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRL 870 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~----G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l 870 (1152)
|++++.||..|...|++ |.++.+||.|++.+ +........... ...+.......+|+|++++||.+-
T Consensus 172 Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~-S~~~~~~~~~~~--------~~~~d~~t~~LFGDGAaAvVl~~~ 242 (465)
T 3e1h_A 172 CSGGLAALRTAANLCLGHTARGKPARILVLALEVS-TTMVRSELESID--------ALQETRIGIALFSDCASAVILSNG 242 (465)
T ss_dssp GGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECC-GGGHHHHHHHHH--------HHTCCCCHHHHBCCEEEEEEEECC
T ss_pred chHHHHHHHHHHHHHhcccccCCCCEEEEEEEeec-chhcCccccccc--------ccccccccccccccceeEEEEEcc
Confidence 99999999999999996 99999999999984 332221111100 111223456789999999999874
Q ss_pred chhhcCCCceEEEEEEEEEecC--CCC--------CCC---CCCC-----HHHHHHHHHHHHHH-------cCCCCCCcc
Q psy616 871 SRALSDGDPIHAIIRGSGINYD--GKT--------NGI---TAPN-----GISQTELIKSVYKK-------SNLNPEDIN 925 (1152)
Q Consensus 871 ~~A~~dgd~i~avI~g~a~~~d--G~~--------~~~---~~P~-----~~~q~~~i~~al~~-------Agi~p~dI~ 925 (1152)
.........++ .+.++..... +.. .++ ..+. .....++++++|++ +|++++||+
T Consensus 243 ~~~~~~~~~~~-~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId 321 (465)
T 3e1h_A 243 IGEAPGKPAIY-DLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFD 321 (465)
T ss_dssp TTCCTTCCCSE-EEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSE
T ss_pred CCCccccccce-eeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHce
Confidence 32110011233 3333322211 110 000 0111 24456778888887 689999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeee-ccCCCCCccccchhhHHHHHHHHhhhc--CCcCCCCCCCCCC
Q psy616 926 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAIT-SNKSNIGHTFAASGLVSLINLVQSIKY--KIIPASLHCEKEN 1002 (1152)
Q Consensus 926 yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ig-svKsniGH~~~AaG~~~lik~~l~l~~--~~ipp~~~~~~~n 1002 (1152)
|+ .|=-+.. =++++.+.++-...+ +... .+=...||+-+|+=...|-. +++. +.+.|.
T Consensus 322 ~~-~Hqan~r-----Il~~v~~~Lgl~~ek---~~~s~~~l~~yGNtsSASip~aL~~---~~~~~~g~l~~G------- 382 (465)
T 3e1h_A 322 WA-MHPGGAT-----ILSGAESAMGLTPEH---MRASYDRYINHGNSSSATIFSVLNR---LREKDMDALAPG------- 382 (465)
T ss_dssp EE-ECCSSHH-----HHHHHHHHHTCCGGG---GHHHHHHHHHHCBCGGGHHHHHHHH---HTSTTTTSCSSS-------
T ss_pred EE-ecCCChH-----HHHHHHHHhCcCHHH---hHHHHHHHhcceechHhHHHHHHHH---HHHhcccccCCC-------
Confidence 99 9955543 345555556532211 1100 01123488888764444332 2222 222211
Q ss_pred cccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1003 NYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1003 p~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
.....+.+..+||.|=+-..++|+-.
T Consensus 383 ----------------------g~~~d~vll~gfG~Glt~~~~llr~~ 408 (465)
T 3e1h_A 383 ----------------------GKVKEYVVGCAFGPGINVEMCMLKRR 408 (465)
T ss_dssp ----------------------SCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ----------------------CCCCCEEEEEEEhHHHhhhheeeEEe
Confidence 00113456889998888888888753
|
| >1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A | Back alignment and structure |
|---|
Probab=99.00 E-value=2e-10 Score=102.62 Aligned_cols=73 Identities=14% Similarity=0.219 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHH
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 575 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~ 575 (1152)
+.+.+.+++.+++++++++++|+++.+| .++|+|||.+++|..+|+++||++++...+++++|+.+|++|+.+
T Consensus 6 ~~i~~~l~~~l~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 79 (81)
T 1f80_D 6 ADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQN 79 (81)
T ss_dssp CHHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHCCCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHh
Confidence 3467789999999999998999999999 999999999999999999999999999999999999999999854
|
| >1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=6.1e-10 Score=103.42 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
..+.+.+++++++++++++++|+++.+|.+||+|||.+++|..+|+++||++++...+++.+|+.+|++|+.++..
T Consensus 16 ~~i~~~l~~ila~~l~v~~~~I~~d~~L~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~~~~ 91 (100)
T 1vku_A 16 KKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLE 91 (100)
T ss_dssp HHHHHHHHHHHHHTTCCCCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHhh
Confidence 4577889999999999999999999999999999999999999999999999999999999999999999987654
|
| >1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-10 Score=103.65 Aligned_cols=72 Identities=18% Similarity=0.313 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHhCCCCc-ccc--cCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 505 IENDIKNHICNILNTKKS-EIY--KNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~-~i~--~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.+.+++.|+++++++++ +|+ ++.+|.+||+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 5 ~~~~l~~~l~~~l~~~~~~~i~~~~~~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 79 (83)
T 1or5_A 5 TVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTT 79 (83)
T ss_dssp CHHHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCcccccCCCCCCcHHHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHH
Confidence 356789999999999877 898 999999999999999999999999999999999999999999999999654
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.3e-09 Score=134.22 Aligned_cols=163 Identities=12% Similarity=0.067 Sum_probs=114.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHH-HHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLK-MISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~-v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|+||.++++.|++++...|+++.|+.... ..+. ...++.++.+|++|.++ +.++++ .
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~---~~~~-~~~~v~~v~~Dl~d~~~~~~~~~~-------~ 382 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI---SRFL-NHPHFHFVEGDISIHSEWIEYHVK-------K 382 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTT---GGGT-TCTTEEEEECCTTTCHHHHHHHHH-------H
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhh---hhhc-cCCceEEEECCCCCcHHHHHHhhc-------C
Confidence 4678999999999999999999998333566666654221 1111 13468899999999754 555543 4
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC---------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 384 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~--------- 384 (1152)
+|.|||+||... ... ..+++...+++|+.|+.++.+++.. .. ..||++||.+.+-+..
T Consensus 383 ~D~Vih~Aa~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~-------~~-~r~V~~SS~~vyg~~~~~~~~E~~~ 449 (660)
T 1z7e_A 383 CDVVLPLVAIAT-PIE----YTRNPLRVFELDFEENLRIIRYCVK-------YR-KRIIFPSTSEVYGMCSDKYFDEDHS 449 (660)
T ss_dssp CSEEEECCCCCC-THH----HHHSHHHHHHHHTHHHHHHHHHHHH-------TT-CEEEEECCGGGGBTCCSSSBCTTTC
T ss_pred CCEEEECceecC-ccc----cccCHHHHHHhhhHHHHHHHHHHHH-------hC-CEEEEEecHHHcCCCCCcccCCCcc
Confidence 899999999754 211 2345678999999999999998643 12 6799999976542211
Q ss_pred ---------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 385 ---------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 ---------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+.+|.+.+.+++....+. +.+++.+..+.+-+
T Consensus 450 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~-----gi~~~ilRpg~v~G 495 (660)
T 1z7e_A 450 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-----GLQFTLFRPFNWMG 495 (660)
T ss_dssp CEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECSEES
T ss_pred ccccCcccCCCCCcHHHHHHHHHHHHHHHHHc-----CCCEEEECCCcccC
Confidence 12369999999999998765431 23777787776644
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1e-09 Score=122.99 Aligned_cols=131 Identities=15% Similarity=0.067 Sum_probs=99.6
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
++|||||+|.||..+++.|+ +|. .|+.+.|+.. ++.+|++|.+++.++++.. ++|.|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~-~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~-----~~d~v 58 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVG-NLIALDVHSK----------------EFCGDFSNPKGVAETVRKL-----RPDVI 58 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTS-EEEEECTTCS----------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred eEEEECCCCHHHHHHHHHhh-cCC-eEEEeccccc----------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence 58999999999999999999 876 5666666541 3578999999998888764 68999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-----------C
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-----------S 386 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g-----------~ 386 (1152)
||+||... .. .+.+++...+++|+.|+.++.+++. .... .||++||.+.+-+..+ .
T Consensus 59 ih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~~-------~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~ 125 (299)
T 1n2s_A 59 VNAAAHTA-VD----KAESEPELAQLLNATSVEAIAKAAN-------ETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL 125 (299)
T ss_dssp EECCCCCC-HH----HHTTCHHHHHHHHTHHHHHHHHHHT-------TTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred EECcccCC-Hh----hhhcCHHHHHHHHHHHHHHHHHHHH-------HcCC-cEEEEecccEEeCCCCCCCCCCCCCCCc
Confidence 99999754 11 1223466788999999999999852 2233 6999999865433222 4
Q ss_pred hhhhHHHHHHHHHHHHHH
Q psy616 387 CDYAMGNRFQTVYAKYLN 404 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~~ 404 (1152)
..|+.+|...+.+++...
T Consensus 126 ~~Y~~sK~~~E~~~~~~~ 143 (299)
T 1n2s_A 126 NVYGKTKLAGEKALQDNC 143 (299)
T ss_dssp SHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHhC
Confidence 689999999999987653
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.98 E-value=8.5e-10 Score=133.74 Aligned_cols=159 Identities=14% Similarity=0.137 Sum_probs=113.1
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchH----HHHHHHH---------hCCCcEEEEEecCCCHHHH
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS----IIYKKLK---------KFNNKAIYIQVDVSDKLKM 300 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~----~~~~~l~---------~~g~~v~~~~~Dvsd~~~v 300 (1152)
.+.+++|||||+|.||..+++.|.++|. .|+++.|+.... .+.+.++ ....++.++.+|++|++.+
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 226 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 226 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTTEE-EEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred CCCCeEEEECCccchHHHHHHHHHhcCC-EEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence 3457999999999999999999988776 455555554422 2222222 2246799999999997776
Q ss_pred HHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc
Q psy616 301 ISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI 380 (1152)
Q Consensus 301 ~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~ 380 (1152)
. ....+|.|||||+... . ...+...+.+|+.|+.++.+++. . ....||++||.+.
T Consensus 227 ~--------~~~~~D~Vih~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a~-------~-~~~~~v~iSS~~v- 281 (508)
T 4f6l_B 227 V--------LPENMDTIIHAGARTD-H-------FGDDDEFEKVNVQGTVDVIRLAQ-------Q-HHARLIYVSTISV- 281 (508)
T ss_dssp C--------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHH-------T-TTCEEEEEEESCT-
T ss_pred C--------CccCCCEEEECCceec-C-------CCCHHHHhhhHHHHHHHHHHHHH-------h-CCCcEEEeCChhh-
Confidence 6 4568999999999754 1 23456778899999999999853 2 3467999999876
Q ss_pred cCC--------------------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 381 LGD--------------------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 381 ~g~--------------------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
|. .....|+.+|...+.+.+..+..|+ +++.+..+..-
T Consensus 282 -G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi------~~~ilRp~~v~ 339 (508)
T 4f6l_B 282 -GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGL------DGRIVRVGNLT 339 (508)
T ss_dssp -TSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTC------EEEEEEECCEE
T ss_pred -ccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCC------CEEEEecceec
Confidence 22 1457899999999999988765554 77777765543
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.1e-09 Score=116.75 Aligned_cols=77 Identities=17% Similarity=0.343 Sum_probs=72.1
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 501 IEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 501 ~~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
....+++.|++.|+++|++++++|+.+++|++||+|||++++|+++|++.||++|+...+|++|||.+|++||.++.
T Consensus 127 ~~~~i~~~l~~~~~~~l~~~~~~i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~ 203 (212)
T 2l22_A 127 QRESIQDYLKQSLGELLFLDPGQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRV 203 (212)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSSCCSSCCGGGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCChhhCCCCCCHHHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHh
Confidence 34567889999999999998889999999999999999999999999999999999999999999999999998764
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=98.96 E-value=8.6e-09 Score=118.67 Aligned_cols=240 Identities=18% Similarity=0.226 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-CcccccccchhH
Q psy616 720 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSSS 798 (1152)
Q Consensus 720 rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsSs 798 (1152)
-|..+++.+||+++|+++++++ .+++++...++.. ...+.+|...||++. +++-|..+|+++
T Consensus 64 ~la~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~~~-------------P~~a~~v~~~LGl~~~~a~di~~~C~g~ 126 (350)
T 4ewp_A 64 VMAVGAAREALERAGLQGSDLD----AVIVSTVTFPHAT-------------PSAAALVAHEIGATPAPAYDVSAACAGY 126 (350)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCS----EEEEECSCCSCSS-------------SCHHHHHHHHTTCTTSCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCCC-------------CchHHHHHHHhCCCCceEEEeecchhhH
Confidence 4789999999999999998887 6777766544221 124677888999975 777888999999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcCCC
Q psy616 799 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGD 878 (1152)
Q Consensus 799 l~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd 878 (1152)
+.||..|...|++|.++.+||.+++... . .+.+ ......+.+|+|+++++|++.+. .
T Consensus 127 ~~aL~~A~~~i~~g~~~~~Lvv~~E~~s-~----------~~d~-------~~~~~~~lfgDGA~A~vl~~~~~-----~ 183 (350)
T 4ewp_A 127 CYGVAQADALVRSGTARHVLVVGVERLS-D----------VVDP-------TDRSISFLLGDGAGAVIVAASDE-----P 183 (350)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEEEGG-G----------GCCT-------TCTTTGGGBCEEEEEEEEEEESS-----C
T ss_pred HHHHHHhhhhhhCCCccceeEeeeeece-e----------cccc-------cccccccccccchheeeeecccC-----C
Confidence 9999999999999999999999999742 1 1211 22234678999999999986542 2
Q ss_pred ceEEEEEEEEEecCCCCC--------------------------C------C----CCCCH--------HHHHHHHHHHH
Q psy616 879 PIHAIIRGSGINYDGKTN--------------------------G------I----TAPNG--------ISQTELIKSVY 914 (1152)
Q Consensus 879 ~i~avI~g~a~~~dG~~~--------------------------~------~----~~P~~--------~~q~~~i~~al 914 (1152)
.+.....++ ||... . . ..-++ ....++++++|
T Consensus 184 ~~~~~~~~s----dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L 259 (350)
T 4ewp_A 184 GISPSVWGS----DGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREAL 259 (350)
T ss_dssp CBCCCEEEE----CGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHH
T ss_pred Cccceeeee----cccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHH
Confidence 222222221 11100 0 0 00112 12356889999
Q ss_pred HHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCC
Q psy616 915 KKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPA 994 (1152)
Q Consensus 915 ~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp 994 (1152)
+++|++++||+|+-.|-.+.. =++++.+.++-.. .+..+ ..=...||+-+|+=...|-. .++.+.+.|
T Consensus 260 ~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~Lgl~~--~~~~~--~~l~~~GNtssasi~~~L~~---~~~~g~~~~ 327 (350)
T 4ewp_A 260 DAAGVEPEDLAAFIPHQANMR-----IIDEFAKQLKLPE--SVVVA--RDIADAGNTSAASIPLAMHR---LLEENPELS 327 (350)
T ss_dssp HHHTCCGGGEEEEEECCSCHH-----HHHHHHHHTTCCT--TSEEC--CTHHHHCBCGGGHHHHHHHH---HHHHCGGGT
T ss_pred HhhcCChhHhceEEecCCCHH-----HHHHHHHHcCcCh--HhEEe--cccccccchHHHHHHHHHHH---HHHhCCCCC
Confidence 999999999999999966544 3445556565321 22111 11234699988875554433 233432211
Q ss_pred CCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 995 SLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 995 ~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+ .+.+..+||.|=+-+.+||+
T Consensus 328 -------------------------------G--d~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 328 -------------------------------G--GLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp -------------------------------T--SEEEEEEEETTTEEEEEEEE
T ss_pred -------------------------------c--CEEEEEEEchhhEeEEEEEE
Confidence 1 23467789987777777775
|
| >1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=5.5e-10 Score=101.01 Aligned_cols=74 Identities=16% Similarity=0.246 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHhCCCCc----ccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 505 IENDIKNHICNILNTKKS----EIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~----~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
+.+.++++++++++++++ +|+++.+|.+||+|||.+++|..+|+++||++++...+++++|+.+|++|+.++..
T Consensus 6 ~~~~l~~il~~~l~~~~~~~~~~i~~~~~l~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 83 (86)
T 1af8_A 6 TTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALA 83 (86)
T ss_dssp CHHHHHHHHHTTCCCCSCCCTTTCSSTTSTTTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccccccCCCCCChhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHhh
Confidence 356789999999999876 78899999999999999999999999999999999999999999999999987654
|
| >1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=98.93 E-value=1.4e-09 Score=104.04 Aligned_cols=77 Identities=22% Similarity=0.274 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNN 579 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~~ 579 (1152)
+.+.+.+++.|++++++++++|+++.+| .+||+|||.+++|..+|+++||++++...+++++||.+|++|+.++..+
T Consensus 6 ~~i~~~l~~il~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~~ 83 (115)
T 1klp_A 6 EEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLEEE 83 (115)
T ss_dssp HHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhCcCHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHHcc
Confidence 4577889999999999998999999999 4999999999999999999999999999999999999999999887643
|
| >1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.3e-09 Score=100.40 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHhCCCCc----ccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 506 ENDIKNHICNILNTKKS----EIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 506 ~~~l~~~ia~~L~~~~~----~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
.+.++++|+++++.+.+ +|+++.+|++||+|||.+++|..+|+++||++|+...+++++|+.+|++||.++..
T Consensus 6 ~~~l~~ii~~~l~~~~~~~~~~i~~d~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~ 82 (95)
T 1nq4_A 6 LSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLT 82 (95)
T ss_dssp HHHHHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccccccccCCCCCChhhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHHh
Confidence 35688899999998643 79999999999999999999999999999999999999999999999999987653
|
| >3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-09 Score=100.93 Aligned_cols=73 Identities=25% Similarity=0.317 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 504 FIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 504 ~~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
.+.+.+++++++++++++++|+++.+|+ +||+|||.+++|...|+++||++++...+++++|+.+|++||.++
T Consensus 22 ~i~~~l~~iia~~l~~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 95 (97)
T 3ejb_A 22 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 95 (97)
T ss_dssp CHHHHHHHHHHHHSCCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCcCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHh
Confidence 3677899999999999999999999995 999999999999999999999999999999999999999999764
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=98.90 E-value=7.7e-09 Score=116.06 Aligned_cols=150 Identities=15% Similarity=0.126 Sum_probs=100.6
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+++|||||+|+||.++++.|+++|...|+++.|++.... .+.+...+ +.++.+|++|++++.++++ .+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~-~~~l~~~~--~~~~~~D~~d~~~l~~~~~-------~~d 74 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA-AKELRLQG--AEVVQGDQDDQVIMELALN-------GAY 74 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH-HHHHHHTT--CEEEECCTTCHHHHHHHHT-------TCS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH-HHHHHHCC--CEEEEecCCCHHHHHHHHh-------cCC
Confidence 5789999999999999999999998346666666643322 23344434 6778999999988877664 489
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC---CCChhhhHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---FGSCDYAMG 392 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~---~g~~~Yaaa 392 (1152)
.|||+||... .. . ...++.++.++.+++. + ...++||+.|| .+..+. .....|+.+
T Consensus 75 ~vi~~a~~~~-~~-----~-------~~~~~~~~~~~~~aa~----~---~gv~~iv~~S~-~~~~~~~~~~~~~~y~~s 133 (299)
T 2wm3_A 75 ATFIVTNYWE-SC-----S-------QEQEVKQGKLLADLAR----R---LGLHYVVYSGL-ENIKKLTAGRLAAAHFDG 133 (299)
T ss_dssp EEEECCCHHH-HT-----C-------HHHHHHHHHHHHHHHH----H---HTCSEEEECCC-CCHHHHTTTSCCCHHHHH
T ss_pred EEEEeCCCCc-cc-----c-------chHHHHHHHHHHHHHH----H---cCCCEEEEEcC-ccccccCCCcccCchhhH
Confidence 9999998643 11 1 1234556666666532 2 24567888555 443322 224689999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
|..++.+.+. .++ +++.+..+.+.
T Consensus 134 K~~~e~~~~~---~gi------~~~ilrp~~~~ 157 (299)
T 2wm3_A 134 KGEVEEYFRD---IGV------PMTSVRLPCYF 157 (299)
T ss_dssp HHHHHHHHHH---HTC------CEEEEECCEEG
T ss_pred HHHHHHHHHH---CCC------CEEEEeecHHh
Confidence 9999988753 333 67777776544
|
| >2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.6e-10 Score=102.76 Aligned_cols=73 Identities=14% Similarity=0.214 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 504 FIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 504 ~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
.+++.+++.|++++++++++|+++.+| +++|+|||.+++|..+|+++||++++...+++++|+++|++|+.++
T Consensus 4 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 77 (79)
T 2l3v_A 4 DTAERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDKA 77 (79)
T ss_dssp HHHHHHHHHHHHHTCCCSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHh
Confidence 366789999999999998899999999 9999999999999999999999999999999999999999999764
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=7.6e-09 Score=115.04 Aligned_cols=137 Identities=17% Similarity=0.130 Sum_probs=94.1
Q ss_pred EEEECCchhHHHHHHHHHHHc--CCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 239 YLITGGTGRLGMLFSDYLINK--YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~--Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+|||||+|+||.++++.|+++ |..++++.++....+. +... .+.++.+|++|.+++.++++ .+|.
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----~~~~--~~~~~~~D~~d~~~~~~~~~-------~~d~ 68 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA----LAAQ--GITVRQADYGDEAALTSALQ-------GVEK 68 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH----HHHT--TCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh----hhcC--CCeEEEcCCCCHHHHHHHHh-------CCCE
Confidence 799999999999999999998 8765555443332222 2222 36788999999988876653 4799
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHH
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 396 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l 396 (1152)
|||+||... . .++.++.++.+++.. .....||++||.... .....|+.+|...
T Consensus 69 vi~~a~~~~-~----------------~~~~~~~~l~~a~~~-------~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~ 121 (286)
T 2zcu_A 69 LLLISSSEV-G----------------QRAPQHRNVINAAKA-------AGVKFIAYTSLLHAD---TSPLGLADEHIET 121 (286)
T ss_dssp EEECC-------------------------CHHHHHHHHHHH-------HTCCEEEEEEETTTT---TCCSTTHHHHHHH
T ss_pred EEEeCCCCc-h----------------HHHHHHHHHHHHHHH-------cCCCEEEEECCCCCC---CCcchhHHHHHHH
Confidence 999998521 1 367788888877532 135679999998765 2345899999999
Q ss_pred HHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 397 TVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 397 ~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
+.+.+. .++ +++.+..+.+
T Consensus 122 e~~~~~---~~~------~~~ilrp~~~ 140 (286)
T 2zcu_A 122 EKMLAD---SGI------VYTLLRNGWY 140 (286)
T ss_dssp HHHHHH---HCS------EEEEEEECCB
T ss_pred HHHHHH---cCC------CeEEEeChHH
Confidence 988753 333 6777766543
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=98.88 E-value=2e-09 Score=120.01 Aligned_cols=130 Identities=17% Similarity=0.040 Sum_probs=94.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++++|||| +|.||..+++.|+++|..++++ .|+... ....+.++.+|++|.+++.++++ +++|
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~-~r~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~------~~~d 65 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGL-RRSAQP---------MPAGVQTLIADVTRPDTLASIVH------LRPE 65 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEE-ECTTSC---------CCTTCCEEECCTTCGGGCTTGGG------GCCS
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEE-eCCccc---------cccCCceEEccCCChHHHHHhhc------CCCC
Confidence 45799999 5999999999999999865555 444321 12457789999999988776553 3699
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-----------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----------- 384 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~----------- 384 (1152)
.|||+||... .+....+++|+.|+.++.+++ .......||++||.+.+-...
T Consensus 66 ~vih~a~~~~----------~~~~~~~~~n~~~~~~ll~a~-------~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~ 128 (286)
T 3gpi_A 66 ILVYCVAASE----------YSDEHYRLSYVEGLRNTLSAL-------EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPI 128 (286)
T ss_dssp EEEECHHHHH----------HC-----CCSHHHHHHHHHHT-------TTSCCCEEEEEEEGGGCCCCCSSEECTTSCCC
T ss_pred EEEEeCCCCC----------CCHHHHHHHHHHHHHHHHHHH-------hhCCCCEEEEEcccEEEcCCCCCCCCCCCCCC
Confidence 9999998632 234567889999999999984 344567899999975432222
Q ss_pred CChhhhHHHHHHHHH
Q psy616 385 GSCDYAMGNRFQTVY 399 (1152)
Q Consensus 385 g~~~Yaaana~l~~l 399 (1152)
....|+.+|...+.+
T Consensus 129 p~~~Y~~sK~~~E~~ 143 (286)
T 3gpi_A 129 AKDFSGKRMLEAEAL 143 (286)
T ss_dssp CCSHHHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHH
Confidence 256899999998887
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.87 E-value=8.2e-08 Score=112.16 Aligned_cols=246 Identities=13% Similarity=0.104 Sum_probs=157.5
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCC--cccc-c
Q psy616 716 DPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGP--VMAI-N 792 (1152)
Q Consensus 716 dpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GP--s~tv-d 792 (1152)
+....|..+++.+||++||+++++++ .|++++..+ +. .+ ..+.++...+|+++. .+.| .
T Consensus 135 ~~~~~La~~Aa~~AL~~agi~~~dId----~li~~t~t~-~~--------~P-----~~a~~v~~~LGl~~~~~~~~v~~ 196 (413)
T 3v7i_A 135 EAVQAYGERAARGALQIAGLDVADVD----CLITSNSTT-PA--------LP-----GLDVALANRLPLRGDTMLLPATQ 196 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECCSS-CC--------SS-----CHHHHHHHHTTCCTTCEEEEESS
T ss_pred cCHHHHHHHHHHHHHHHhCcCHHHCC----EEEEEccCC-CC--------cC-----HHHHHHHHHhCCCCCceEEEeeC
Confidence 35567899999999999999998887 788887654 10 11 256789999999873 4667 9
Q ss_pred ccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCC----CcccccccEEEEEc
Q psy616 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERAN----GLVPSEAVVAVVLK 868 (1152)
Q Consensus 793 taCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~----G~v~gEG~~~vvLk 868 (1152)
.+|+|++.||..|...|++|.++.+||+|++.+... +.++ |.+-+ ...+|+|++++||.
T Consensus 197 ~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~-----------~~~~------d~~~~~lv~~~LFGDGAaAvvl~ 259 (413)
T 3v7i_A 197 WACVAGTRSLALAADLVAADPDRVVLVVISEALSTT-----------YQPA------DDTLESLIVRLLFADTAVAAVVT 259 (413)
T ss_dssp CGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG-----------CCSS------CCSTTHHHHHHHBCCEEEEEEEE
T ss_pred CccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc-----------cCcc------ccchhhhhcceeeccccEEEEEE
Confidence 999999999999999999999999999999984211 1111 11111 56799999999998
Q ss_pred ccchhhcCCCceEEEEEEEEEec--CCCC--------CC---CCCCC----HHHHHHHHHHHHH------HcCCCCCCcc
Q psy616 869 RLSRALSDGDPIHAIIRGSGINY--DGKT--------NG---ITAPN----GISQTELIKSVYK------KSNLNPEDIN 925 (1152)
Q Consensus 869 ~l~~A~~dgd~i~avI~g~a~~~--dG~~--------~~---~~~P~----~~~q~~~i~~al~------~Agi~p~dI~ 925 (1152)
+.+.. ...+ .|.++.... ++.. .+ ...+. ......+++++|+ ++|++ |+
T Consensus 260 ~~~~~----~~~~-~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~~gl~---id 331 (413)
T 3v7i_A 260 GRPRP----ESVL-RLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDPSSWH---PD 331 (413)
T ss_dssp SSCCT----TEEE-EEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSCTTCC---CC
T ss_pred ecCCC----CCCE-EEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhccccccCCCc---ee
Confidence 64321 1222 344433211 1110 00 01111 2234567889999 89987 99
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhcccCCCCCce-eeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcc
Q psy616 926 YIITHGTGTKLGDPVEINALHDVFKNKTYNQKFC-AITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNY 1004 (1152)
Q Consensus 926 yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~-~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~ 1004 (1152)
++-.|-.+.. =++++.+.+++.-+..+.. ..-.+. .||+-+|+=...|-.++ +. .+.|
T Consensus 332 ~~v~Hq~~~~-----il~~v~~~Lg~~l~~ek~~~s~~~l~--~GNtssAsi~~~L~~~~---~~-~~~~---------- 390 (413)
T 3v7i_A 332 VLLAHPGGTR-----VLEYMEQTMPDEWPSGLLSYSRDSYT--SGNRGGAAVFDILRRAH---DA-GQKT---------- 390 (413)
T ss_dssp EEEEECSSHH-----HHHHHHHHSCSSCCSCSTHHHHHHHT--TCBCGGGHHHHHHHHHH---HH-CCCT----------
T ss_pred EEEECCCChH-----HHHHHHHHhCCCCCHHHhhccceEec--eeChHHHHHHHHHHHHH---hC-CCCC----------
Confidence 9999966543 3456666666111111110 122334 79999887665554433 22 1111
Q ss_pred cccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 1005 IILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 1005 i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+ ...+..+||.|=+-..++|+
T Consensus 391 ---------------------G--d~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 391 ---------------------G--SRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp ---------------------T--CEEEEEEEETTTEEEEEEEE
T ss_pred ---------------------C--CEEEEEEECHHHhHhhhheE
Confidence 1 23568889988888888875
|
| >2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.2e-09 Score=97.48 Aligned_cols=75 Identities=19% Similarity=0.329 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHh---CCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 503 KFIENDIKNHICNIL---NTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L---~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
+.+.+.+++.+++++ ++++++|+++.+| .++|+|||.+++|..+|+++||++++...+++.+|+.+|++|+.++.
T Consensus 7 ~~i~~~v~~~i~~~l~~~~~~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 85 (88)
T 2l4b_A 7 EEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYIASKS 85 (88)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhCCCCHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHhh
Confidence 457788999999999 8878889999999 79999999999999999999999999999999999999999998764
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=3.1e-08 Score=114.07 Aligned_cols=144 Identities=13% Similarity=0.025 Sum_probs=100.2
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEec-CCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVD-VSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~D-vsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++||||+|+||.++++.|+++|..++++ .|+..... .+.+... ..+.++.+| ++|++++.++++ .+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~-~~~l~~~-~~v~~v~~D~l~d~~~l~~~~~-------~~ 74 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQ-VHSLKGLI-AEELQAI-PNVTLFQGPLLNNVPLMDTLFE-------GA 74 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEE-ESCSCSHH-HHHHHTS-TTEEEEESCCTTCHHHHHHHHT-------TC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEE-ECCCChhh-HHHHhhc-CCcEEEECCccCCHHHHHHHHh-------cC
Confidence 4679999999999999999999998765554 45433221 2334332 357889999 999998887654 47
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCC-CCEEEEecCCc-cccCCCCChhhhHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNK-LDFVCYFSSSS-AILGDFGSCDYAMG 392 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~-~~~iV~~SS~a-~~~g~~g~~~Yaaa 392 (1152)
|.||||++... . ..|..+ .++.+++. +. . .++||++||.. +..+......|+.+
T Consensus 75 d~Vi~~a~~~~-~---------------~~~~~~-~~l~~aa~----~~---g~v~~~V~~SS~~~~~~~~~~~~~y~~s 130 (352)
T 1xgk_A 75 HLAFINTTSQA-G---------------DEIAIG-KDLADAAK----RA---GTIQHYIYSSMPDHSLYGPWPAVPMWAP 130 (352)
T ss_dssp SEEEECCCSTT-S---------------CHHHHH-HHHHHHHH----HH---SCCSEEEEEECCCGGGTSSCCCCTTTHH
T ss_pred CEEEEcCCCCC-c---------------HHHHHH-HHHHHHHH----Hc---CCccEEEEeCCccccccCCCCCccHHHH
Confidence 99999997532 1 124444 55555532 22 3 56899999987 45565667889999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWP 422 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg 422 (1152)
|...+.+.+. .++ +++.|..+
T Consensus 131 K~~~E~~~~~---~gi------~~~ivrpg 151 (352)
T 1xgk_A 131 KFTVENYVRQ---LGL------PSTFVYAG 151 (352)
T ss_dssp HHHHHHHHHT---SSS------CEEEEEEC
T ss_pred HHHHHHHHHH---cCC------CEEEEecc
Confidence 9999988864 233 66777744
|
| >2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A | Back alignment and structure |
|---|
Probab=98.82 E-value=3.2e-09 Score=99.05 Aligned_cols=75 Identities=13% Similarity=0.171 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCcee------c-----ccCCCHHHHHHH
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSI------F-----FSYSTLERLITY 572 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~------l-----f~~~Ti~~La~~ 572 (1152)
+.+.+++++++++++++++|+++.+| .+||+|||.+++|...|+++||++++... + |+|||+.+|++|
T Consensus 4 i~~~v~~ii~~~l~~~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~~~ 83 (101)
T 2kw2_A 4 TFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAAR 83 (101)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHHHH
Confidence 45679999999999999999999998 69999999999999999999999999877 4 677779999999
Q ss_pred HHHhhhh
Q psy616 573 FIKNHNN 579 (1152)
Q Consensus 573 L~~~~~~ 579 (1152)
|.++..+
T Consensus 84 i~~~~~~ 90 (101)
T 2kw2_A 84 IDELVAA 90 (101)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 9887643
|
| >2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.31 E-value=4.5e-10 Score=104.97 Aligned_cols=73 Identities=21% Similarity=0.298 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
+.+.|++++++++++++++|+++.+|.+||+|||.+++|..+|+++||++|+..++++.+|+.+|++||.++.
T Consensus 27 i~~~l~~ila~~l~i~~~~I~~d~~l~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I~~~~ 99 (103)
T 2lte_A 27 MEDHLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHR 99 (103)
Confidence 6778999999999999999999999999999999999999999999999999999999999999999997754
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=1.9e-09 Score=125.42 Aligned_cols=214 Identities=15% Similarity=0.153 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--Ccccccccch
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACS 796 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCs 796 (1152)
.-|..+++.+||+++| +++++ .|++|+..+++. . ...+..|...||+++ |.+.+..+|+
T Consensus 57 ~~La~~Aa~~aL~~a~--~~~Id----~li~~t~t~~~~--------~-----ps~a~~v~~~LGl~~~~~~~dv~~aC~ 117 (388)
T 3v4n_A 57 VTFAANAAEAILTKED--KEAID----MVIVGTESSIDE--------S-----KAAAVVLHRLMGIQPFARSFEIKEAXY 117 (388)
T ss_dssp HHHHHHHHHTTCCHHH--HHHEE----EEEEECSSCSBS--------S-----SCHHHHHHHHTTCCSSCEEEEEESGGG
T ss_pred HHHHHHHHHHHHHhCC--cccCC----EEEEEeccCCCc--------C-----ccHHHHHHHHcCCCCCceEeehhhhhh
Confidence 5688899999999997 44444 566776554321 1 124778999999986 8889999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhhcC
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSD 876 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~d 876 (1152)
|++.||..|+..|++|.++.|||+|++.... . ++ ..+.+..|+|++++||.+-.
T Consensus 118 gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~-----------~---------~~-~~~~~lfGDGA~A~ll~~~~----- 171 (388)
T 3v4n_A 118 GATAGLQLAKNHVALHPDKKVLVVAADIAKY-----------G---------LN-SGGEPTQGAGAVAMLVSSEP----- 171 (388)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEEEEECC-----------C---------TT-CTTGGGCEEEEEEEEEEESC-----
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEehhhcc-----------c---------CC-CCCCCccccceeEEEeecCC-----
Confidence 9999999999999999999999999998421 0 11 11257889999999998732
Q ss_pred CCceEEEEEEE-EEecCCC----CCCCCCC--C--------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHH
Q psy616 877 GDPIHAIIRGS-GINYDGK----TNGITAP--N--------GISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941 (1152)
Q Consensus 877 gd~i~avI~g~-a~~~dG~----~~~~~~P--~--------~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E 941 (1152)
.|...-.++ +...+-. ..+...| + .....++++++++++|++++||+|+-.|-..++++-..=
T Consensus 172 --~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~ka~ 249 (388)
T 3v4n_A 172 --RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKKAL 249 (388)
T ss_dssp --SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHHHH
T ss_pred --CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHHHH
Confidence 233221111 1111111 0000011 1 234456788999999999999999999974443211100
Q ss_pred ---H----HHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHH
Q psy616 942 ---I----NALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLV 984 (1152)
Q Consensus 942 ---~----~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~ 984 (1152)
+ +++.+.++-...+ .-.+=..+||+.+|+=..+|..++
T Consensus 250 ~ril~~~~~~~~~~l~~~~e~-----~~~~~~~~GN~~sASi~l~L~~~l 294 (388)
T 3v4n_A 250 LAKISDQTEAEQERILARYEE-----SIIYSRRVGNLYTGSLYLGLISLL 294 (388)
T ss_dssp HHHSTTSCHHHHHHHHHHHHH-----HTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred HHHHhcccHHHHHHhCCCHHH-----HhhHHHhcCchHHHHHHHHHHHHH
Confidence 0 1222222211100 112335679999998776665543
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=98.80 E-value=3.9e-09 Score=119.35 Aligned_cols=154 Identities=15% Similarity=0.050 Sum_probs=99.5
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHHHh--CCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKLKK--FNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~-~~~~~~l~~--~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++++|||||+|.||..+++.|+++|..++++ .|+... ......+.. ....+.++.+|++
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------- 68 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVL-DDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------- 68 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEE-CCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------------
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEE-ecCCcccccchhhhhhhccCCCeeEEeCccc-----------------
Confidence 5789999999999999999999999855554 554320 000001111 0123444555554
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG------- 385 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g------- 385 (1152)
.+|.|||+||... ...... + ....+. |+.|+.++.+++... ....||++||.+.+-...+
T Consensus 69 ~~d~vi~~a~~~~-~~~~~~-~---~~~~~~-n~~~~~~ll~a~~~~-------~v~~~v~~SS~~v~~~~~~~~~~E~~ 135 (321)
T 3vps_A 69 DVRLVYHLASHKS-VPRSFK-Q---PLDYLD-NVDSGRHLLALCTSV-------GVPKVVVGSTCEVYGQADTLPTPEDS 135 (321)
T ss_dssp TEEEEEECCCCCC-HHHHTT-S---TTTTHH-HHHHHHHHHHHHHHH-------TCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred cCCEEEECCccCC-hHHHHh-C---HHHHHH-HHHHHHHHHHHHHHc-------CCCeEEEecCHHHhCCCCCCCCCCCC
Confidence 7999999999764 211111 1 122445 999999999986432 3567999999765432222
Q ss_pred ----ChhhhHHHHHHHHHHHHHHhcccccCCCc-eEEEEeCCccc
Q psy616 386 ----SCDYAMGNRFQTVYAKYLNNKNIYKKYTN-KLITINWPLWN 425 (1152)
Q Consensus 386 ----~~~Yaaana~l~~la~~~~~~g~~~~~~~-~~~si~wg~w~ 425 (1152)
...|+.+|...+.+++....+. +. +++.+..+..-
T Consensus 136 ~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~ilRp~~v~ 175 (321)
T 3vps_A 136 PLSPRSPYAASKVGLEMVAGAHQRAS-----VAPEVGIVRFFNVY 175 (321)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHSS-----SSCEEEEEEECEEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc-----CCCceEEEEecccc
Confidence 4789999999999998876542 34 56666655443
|
| >4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.79 E-value=4.7e-09 Score=97.61 Aligned_cols=72 Identities=17% Similarity=0.231 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.+.+++++++.+++++++|+++.+| .+||+|||.+++|...|+++||++++...+.+.+|+.+|++||.++
T Consensus 27 i~~~l~~iiae~l~~~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~~ 99 (101)
T 4dxe_H 27 NFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSL 99 (101)
T ss_dssp HHHHHHHHHHHTTCCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHCcChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHc
Confidence 56789999999999999999999999 9999999999999999999999999999999999999999998653
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=98.78 E-value=3.1e-08 Score=111.41 Aligned_cols=142 Identities=14% Similarity=0.126 Sum_probs=93.0
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-------chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-------LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-------~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
.++++||||+|+||.++++.|+++|..++++ .|+. ...+..+.+...+ +.++.+|++|.+++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d~~~l~~~~~--- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYAL-VRKTITAANPETKEELIDNYQSLG--VILLEGDINDHETLVKAIK--- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEE-ECCSCCSSCHHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHT---
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEE-ECCCcccCChHHHHHHHHHHHhCC--CEEEEeCCCCHHHHHHHHh---
Confidence 4579999999999999999999999765555 4443 1111223344444 6788999999988877764
Q ss_pred hhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc------cC
Q psy616 309 NNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI------LG 382 (1152)
Q Consensus 309 ~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~------~g 382 (1152)
.+|.|||+||... +.+..++.+++.. . +...+|| +|+ .+. .+
T Consensus 76 ----~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~----~--g~v~~~v-~S~-~g~~~~~~~~~ 123 (307)
T 2gas_A 76 ----QVDIVICAAGRLL--------------------IEDQVKIIKAIKE----A--GNVKKFF-PSE-FGLDVDRHDAV 123 (307)
T ss_dssp ----TCSEEEECSSSSC--------------------GGGHHHHHHHHHH----H--CCCSEEE-CSC-CSSCTTSCCCC
T ss_pred ----CCCEEEECCcccc--------------------cccHHHHHHHHHh----c--CCceEEe-ecc-cccCcccccCC
Confidence 4899999998632 3455666666421 1 1245676 343 331 11
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 383 DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 383 ~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
.++...| .+|..++.+.+. .++ +++.+..+.+.
T Consensus 124 ~p~~~~y-~sK~~~e~~~~~---~~i------~~~~lrp~~~~ 156 (307)
T 2gas_A 124 EPVRQVF-EEKASIRRVIEA---EGV------PYTYLCCHAFT 156 (307)
T ss_dssp TTHHHHH-HHHHHHHHHHHH---HTC------CBEEEECCEET
T ss_pred CcchhHH-HHHHHHHHHHHH---cCC------CeEEEEcceee
Confidence 2335678 999998877652 333 66677766554
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=8.6e-08 Score=109.94 Aligned_cols=187 Identities=17% Similarity=0.087 Sum_probs=114.7
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHH---HHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSI---IYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~---~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
.+++|||||+|.||..+++.|+++|..++++.++...... ..+.+... .+.++.+|++|.+++.+++++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~--~v~~~~~Dl~d~~~l~~~~~~~----- 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDK--GAIIVYGLINEQEAMEKILKEH----- 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHT--TCEEEECCTTCHHHHHHHHHHT-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhC--CcEEEEeecCCHHHHHHHHhhC-----
Confidence 4679999999999999999999999755555443322222 22334433 4778999999999998888652
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC----CCCChh
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG----DFGSCD 388 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g----~~g~~~ 388 (1152)
.+|.|||+||.. |+.++.++.+++... +...+||. |+...... ......
T Consensus 83 ~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~~------g~v~~~v~-S~~g~~~~e~~~~~p~~~ 135 (346)
T 3i6i_A 83 EIDIVVSTVGGE--------------------SILDQIALVKAMKAV------GTIKRFLP-SEFGHDVNRADPVEPGLN 135 (346)
T ss_dssp TCCEEEECCCGG--------------------GGGGHHHHHHHHHHH------CCCSEEEC-SCCSSCTTTCCCCTTHHH
T ss_pred CCCEEEECCchh--------------------hHHHHHHHHHHHHHc------CCceEEee-cccCCCCCccCcCCCcch
Confidence 699999999862 777888888885431 22556664 44322111 123467
Q ss_pred hhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcc---cccc-----ccccchhHHh-hcCCCCCCHHHHHHHHH
Q psy616 389 YAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSK---FKIG-----NNEQTDFYFK-SSKQKVLHENDGLKLFE 459 (1152)
Q Consensus 389 Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~G---m~~~-----~~~~~~~~~~-~~g~~~l~~~e~~~~l~ 459 (1152)
|+.+|..++.+.+. .++ +++.+..+.+.+.. +... .......... ..-...+..++..+++.
T Consensus 136 y~~sK~~~e~~l~~---~g~------~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~ 206 (346)
T 3i6i_A 136 MYREKRRVRQLVEE---SGI------PFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTM 206 (346)
T ss_dssp HHHHHHHHHHHHHH---TTC------CBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---cCC------CEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHH
Confidence 99999998877653 333 66666655443311 1100 0000000000 01123567888888888
Q ss_pred HHHhcC
Q psy616 460 QLLIQD 465 (1152)
Q Consensus 460 ~~l~~~ 465 (1152)
.++..+
T Consensus 207 ~~l~~~ 212 (346)
T 3i6i_A 207 KTVDDV 212 (346)
T ss_dssp HHTTCG
T ss_pred HHHhCc
Confidence 887654
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.72 E-value=9e-08 Score=107.87 Aligned_cols=146 Identities=16% Similarity=0.171 Sum_probs=95.6
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc---hH--HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL---NS--IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~---~~--~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.++++||||+|+||..+++.|+++|..+++ +.|+.. .+ +..+.+.. ..+.++.+|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~R~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~l~~~~~----- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYV-LFRPEVVSNIDKVQMLLYFKQ--LGAKLIEASLDDHQRLVDALK----- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEE-ECCSCCSSCHHHHHHHHHHHT--TTCEEECCCSSCHHHHHHHHT-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEE-EECCCcccchhHHHHHHHHHh--CCeEEEeCCCCCHHHHHHHHh-----
Confidence 457999999999999999999999975544 455432 11 12223333 346788999999988877764
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC------CC
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG------DF 384 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g------~~ 384 (1152)
.+|.|||+||... .. .++.++.++.+++.. .+...+||+ |+...... .+
T Consensus 76 --~~d~vi~~a~~~~-~~---------------~~~~~~~~l~~aa~~------~g~v~~~v~-S~~g~~~~~~~~~~~p 130 (313)
T 1qyd_A 76 --QVDVVISALAGGV-LS---------------HHILEQLKLVEAIKE------AGNIKRFLP-SEFGMDPDIMEHALQP 130 (313)
T ss_dssp --TCSEEEECCCCSS-SS---------------TTTTTHHHHHHHHHH------SCCCSEEEC-SCCSSCTTSCCCCCSS
T ss_pred --CCCEEEECCcccc-ch---------------hhHHHHHHHHHHHHh------cCCCceEEe-cCCcCCccccccCCCC
Confidence 4899999999754 21 267777888777421 122567773 44321111 24
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
+...| .+|..++.+.+ ..++ +++.+..+.+
T Consensus 131 ~~~~y-~sK~~~e~~~~---~~g~------~~~ilrp~~~ 160 (313)
T 1qyd_A 131 GSITF-IDKRKVRRAIE---AASI------PYTYVSSNMF 160 (313)
T ss_dssp TTHHH-HHHHHHHHHHH---HTTC------CBCEEECCEE
T ss_pred CcchH-HHHHHHHHHHH---hcCC------CeEEEEecee
Confidence 45678 99999887764 3333 5556665544
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.72 E-value=8.3e-08 Score=114.43 Aligned_cols=175 Identities=14% Similarity=0.151 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC---CC-Cccccccc
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL---KG-PVMAINTA 794 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l---~G-Ps~tvdta 794 (1152)
.-+..+++.+||++||+++++++ .+++|+..+.+.. ...+..|...|++ .+ |.+.|..|
T Consensus 74 ~~La~~Aa~~aL~~agi~~~dId----~li~~T~t~~~~~-------------ps~a~~v~~~L~~lG~~~~~~~dv~~a 136 (478)
T 2p8u_A 74 NSLCMTVVQNLMERNNLSYDCIG----RLEVGTETIIDKS-------------KSVKTNLMQLFEESGNTDIEGIDTTNA 136 (478)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEE----EEEEECSCCSCSS-------------SCHHHHHGGGTTTTTCCCCBCCEEESG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCcccC-------------ccHHHHHHHHHhhcCCCCceEEEEcch
Confidence 57899999999999999876654 5667765543211 1245667755554 33 77889999
Q ss_pred chhHHHHHHHHHHHHHcCC--CCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccch
Q psy616 795 CSSSLVATHIACQSLRQHE--CDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 872 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~--~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~ 872 (1152)
|++++.||..|+..|++|. ++.|||.|+++. .|+........|+|++++||.+-..
T Consensus 137 C~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia----------------------~~~~~~~~~~fGdGA~A~Ll~~~~~ 194 (478)
T 2p8u_A 137 CYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA----------------------VYATGNARPTGGVGAVALLIGPNAP 194 (478)
T ss_dssp GGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----------------------CCCSSTTGGGCEEEEEEEEEESSCS
T ss_pred hHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee----------------------cccCCCCCCcccceeEEEEEecCCC
Confidence 9999999999999999999 999999999952 1111223468899999999975321
Q ss_pred hhcCCCceEE-EEEEEEEecCCCCCCCCCC---------CHH-HHH----------HHHHHHHH--------HcCCCCCC
Q psy616 873 ALSDGDPIHA-IIRGSGINYDGKTNGITAP---------NGI-SQT----------ELIKSVYK--------KSNLNPED 923 (1152)
Q Consensus 873 A~~dgd~i~a-vI~g~a~~~dG~~~~~~~P---------~~~-~q~----------~~i~~al~--------~Agi~p~d 923 (1152)
. +.. .+.|+.+. +.. .+..| ++. ... +.+++.++ ++|++++|
T Consensus 195 ~------~l~~~~~gs~~~-~~~--d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~~~~d 265 (478)
T 2p8u_A 195 L------IFERGLRGTHMQ-HAY--DFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTLND 265 (478)
T ss_dssp E------EECTTCCEEEEC-CCC--SEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCGGG
T ss_pred c------eEeeccceeccc-chh--heeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCCChHH
Confidence 0 100 01233322 111 11111 111 111 34566666 67999999
Q ss_pred ccEEEecCCCCCCCCHHH
Q psy616 924 INYIITHGTGTKLGDPVE 941 (1152)
Q Consensus 924 I~yve~hgtgT~~gD~~E 941 (1152)
|+|+-.|-.+.++.+.+.
T Consensus 266 id~~v~H~~~~ki~~~~~ 283 (478)
T 2p8u_A 266 FGFMIFHSPYCKLVQKSL 283 (478)
T ss_dssp CSEEEECCSSHHHHHHHH
T ss_pred cCEEEecCCcHHHHHHHH
Confidence 999999998887665543
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=98.71 E-value=1.1e-07 Score=109.93 Aligned_cols=128 Identities=16% Similarity=0.165 Sum_probs=96.1
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecC-CCHHHHHHHHHHHHhhcCCeeE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV-SDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dv-sd~~~v~~~~~~~~~~~G~idg 316 (1152)
++|||||+|.||..+++.|+++|...|+. +|. +|.+++.++++ .+|.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~-------------------------~d~~~d~~~l~~~~~-------~~d~ 49 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFE-------------------------VHRQTKEEELESALL-------KADF 49 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEE-------------------------CCTTCCHHHHHHHHH-------HCSE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEE-------------------------ECCCCCHHHHHHHhc-------cCCE
Confidence 58999999999999999999998733333 444 78888888776 3899
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCC-EEEEecCCccccCCCCChhhhHHHHH
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~-~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
|||+||... .. +....+++|+.++.+|.+++ ...... .||++||..... ...|+.+|..
T Consensus 50 Vih~a~~~~-~~--------~~~~~~~~n~~~~~~l~~a~-------~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~ 109 (369)
T 3st7_A 50 IVHLAGVNR-PE--------HDKEFSLGNVSYLDHVLDIL-------TRNTKKPAILLSSSIQATQ----DNPYGESKLQ 109 (369)
T ss_dssp EEECCCSBC-TT--------CSTTCSSSCCBHHHHHHHHH-------TTCSSCCEEEEEEEGGGGS----CSHHHHHHHH
T ss_pred EEECCcCCC-CC--------CHHHHHHHHHHHHHHHHHHH-------HHhCCCCeEEEeCchhhcC----CCCchHHHHH
Confidence 999999765 21 23446788999999999984 333333 799999977653 6789999999
Q ss_pred HHHHHHHHHhc-ccccCCCceEEEEeCCc
Q psy616 396 QTVYAKYLNNK-NIYKKYTNKLITINWPL 423 (1152)
Q Consensus 396 l~~la~~~~~~-g~~~~~~~~~~si~wg~ 423 (1152)
.+.+.+...++ +. +++.+..+.
T Consensus 110 ~E~~~~~~~~~~g~------~~~i~R~~~ 132 (369)
T 3st7_A 110 GEQLLREYAEEYGN------TVYIYRWPN 132 (369)
T ss_dssp HHHHHHHHHHHHCC------CEEEEEECE
T ss_pred HHHHHHHHHHHhCC------CEEEEECCc
Confidence 99998876553 33 555555443
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=4.8e-08 Score=112.58 Aligned_cols=118 Identities=15% Similarity=0.122 Sum_probs=85.2
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCC----cEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYS----TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga----~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
++++|||||+|.||..+++.|+++|. ..|+++.|+..... ....++.++.+|++|.+++.++++. +
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~----~ 70 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------HEDNPINYVQCDISDPDDSQAKLSP----L 70 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------CCSSCCEEEECCTTSHHHHHHHHTT----C
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------cccCceEEEEeecCCHHHHHHHHhc----C
Confidence 35799999999999999999999982 35666666532211 1234578899999999888776643 3
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEE-------EecCCc
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVC-------YFSSSS 378 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV-------~~SS~a 378 (1152)
+++|.|||+||... . +....+++|+.|+.++.+++.+. ......|| ++||.+
T Consensus 71 ~~~d~vih~a~~~~-~---------~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~~v~~~g~~i~~Ss~~ 129 (364)
T 2v6g_A 71 TDVTHVFYVTWANR-S---------TEQENCEANSKMFRNVLDAVIPN-----CPNLKHISLQTGRKHYMGPFE 129 (364)
T ss_dssp TTCCEEEECCCCCC-S---------SHHHHHHHHHHHHHHHHHHHTTT-----CTTCCEEEEECCTHHHHCCGG
T ss_pred CCCCEEEECCCCCc-c---------hHHHHHHHhHHHHHHHHHHHHHh-----ccccceEEeccCceEEEechh
Confidence 35999999999753 1 35678899999999999985321 01355676 677764
|
| >2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=98.69 E-value=1.8e-08 Score=94.51 Aligned_cols=75 Identities=8% Similarity=0.149 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHhCC--CCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecc--cCCCHHHHHHHHHHhh
Q psy616 503 KFIENDIKNHICNILNT--KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFF--SYSTLERLITYFIKNH 577 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~--~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf--~~~Ti~~La~~L~~~~ 577 (1152)
+.+.+.|+++|++++++ +.++|+++++|++||+|||.+++|...|+++||++|+...++ +++|+..|++++....
T Consensus 21 ~~i~~~i~~il~~~l~~~v~~~~i~~d~~l~dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l~~~v~~~~ 99 (105)
T 2jq4_A 21 GHMNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLIL 99 (105)
T ss_dssp --CHHHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcccCCCCCCHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHHHHHHHHHh
Confidence 44677899999998875 477899999999999999999999999999999999999998 8899999999997654
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=98.67 E-value=5.5e-08 Score=110.16 Aligned_cols=141 Identities=14% Similarity=0.118 Sum_probs=91.2
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-c-----hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-L-----NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~-----~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
.++++||||+|+||.++++.|+++|..++++ .|+. . ..+..+.+... .+.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~l~~~~~~--~v~~v~~D~~d~~~l~~a~~---- 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIY-ARPLTPDSTPSSVQLREEFRSM--GVTIIEGEMEEHEKMVSVLK---- 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEE-ECCCCTTCCHHHHHHHHHHHHT--TCEEEECCTTCHHHHHHHHT----
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEE-ECCcccccChHHHHHHHHhhcC--CcEEEEecCCCHHHHHHHHc----
Confidence 4579999999999999999999999755554 4543 1 11222333333 36789999999988877764
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc------cCC
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI------LGD 383 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~------~g~ 383 (1152)
.+|.|||+||... +.++.++.+++.. . +...+|| + |..+. ...
T Consensus 77 ---~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~----~--g~v~~~v-~-S~~g~~~~~~~~~~ 125 (321)
T 3c1o_A 77 ---QVDIVISALPFPM--------------------ISSQIHIINAIKA----A--GNIKRFL-P-SDFGCEEDRIKPLP 125 (321)
T ss_dssp ---TCSEEEECCCGGG--------------------SGGGHHHHHHHHH----H--CCCCEEE-C-SCCSSCGGGCCCCH
T ss_pred ---CCCEEEECCCccc--------------------hhhHHHHHHHHHH----h--CCccEEe-c-cccccCccccccCC
Confidence 4899999998532 4556666666432 1 1145676 3 43331 111
Q ss_pred CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 384 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 384 ~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
++...| .+|..++.+.+. .++ +++.|..+.+
T Consensus 126 p~~~~y-~sK~~~e~~~~~---~~~------~~~~lrp~~~ 156 (321)
T 3c1o_A 126 PFESVL-EKKRIIRRAIEA---AAL------PYTYVSANCF 156 (321)
T ss_dssp HHHHHH-HHHHHHHHHHHH---HTC------CBEEEECCEE
T ss_pred CcchHH-HHHHHHHHHHHH---cCC------CeEEEEecee
Confidence 224578 999999887752 333 5566665544
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.67 E-value=7.9e-08 Score=107.14 Aligned_cols=142 Identities=18% Similarity=0.252 Sum_probs=90.3
Q ss_pred EEEEECCchhHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 238 TYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~-Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
++|||||+|+||..+++.|.++ |..+++ +.|++... ..+. ...+.++.+|++|++++.++++ .+|.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~-~~R~~~~~---~~~~--~~~v~~~~~D~~d~~~l~~~~~-------~~d~ 68 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHI-GVRNVEKV---PDDW--RGKVSVRQLDYFNQESMVEAFK-------GMDT 68 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEE-EESSGGGS---CGGG--BTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEE-EECCHHHH---HHhh--hCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence 4899999999999999999998 665544 45553211 1122 2357889999999988877653 6899
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHH
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQ 396 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l 396 (1152)
|||+||... .. ..++.++.++.+++. ....+.||++||....... .|..++...
T Consensus 69 vi~~a~~~~-~~--------------~~~~~~~~~l~~aa~-------~~gv~~iv~~Ss~~~~~~~----~~~~~~~~~ 122 (289)
T 3e48_A 69 VVFIPSIIH-PS--------------FKRIPEVENLVYAAK-------QSGVAHIIFIGYYADQHNN----PFHMSPYFG 122 (289)
T ss_dssp EEECCCCCC-SH--------------HHHHHHHHHHHHHHH-------HTTCCEEEEEEESCCSTTC----CSTTHHHHH
T ss_pred EEEeCCCCc-cc--------------hhhHHHHHHHHHHHH-------HcCCCEEEEEcccCCCCCC----CCccchhHH
Confidence 999998754 21 125666667776642 2345789999996543222 233222111
Q ss_pred HHHHHHHHhcccccCCCceEEEEeCCccc
Q psy616 397 TVYAKYLNNKNIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 397 ~~la~~~~~~g~~~~~~~~~~si~wg~w~ 425 (1152)
...+.++..++ +++.+..+.+.
T Consensus 123 -~~e~~~~~~g~------~~~ilrp~~~~ 144 (289)
T 3e48_A 123 -YASRLLSTSGI------DYTYVRMAMYM 144 (289)
T ss_dssp -HHHHHHHHHCC------EEEEEEECEES
T ss_pred -HHHHHHHHcCC------CEEEEeccccc
Confidence 12233344444 77778776554
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=98.67 E-value=1.1e-08 Score=116.66 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
..+++.|.++|+++|+++ .|+.+++||++|+|||++++|.++|++.||++|+...+|++|||++|+++|.+.
T Consensus 10 ~~~e~~l~~~~~~~l~~~--~i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~ 81 (329)
T 3tej_A 10 AGSETIIAAAFSSLLGCD--VQDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAE 81 (329)
T ss_dssp TTHHHHHHHHHHHHHTC---CCSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHhCCC--CCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhh
Confidence 346788999999999986 489999999999999999999999999999999999999999999999999653
|
| >1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A | Back alignment and structure |
|---|
Probab=98.63 E-value=5.6e-08 Score=86.45 Aligned_cols=73 Identities=18% Similarity=0.256 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCCccccC-CchHHHHHHHHHHHHhcCcccCceecc--cCCCHHHHHHHHHHh
Q psy616 504 FIENDIKNHICNILNTKKSEIYKNKNLADYG-FDSISLAEFSRILSKFYSLDIMPSIFF--SYSTLERLITYFIKN 576 (1152)
Q Consensus 504 ~~~~~l~~~ia~~L~~~~~~i~~~~~f~elG-lDSL~aveL~~~l~~~fgv~L~~~~lf--~~~Ti~~La~~L~~~ 576 (1152)
.+.+.+++.+++.++.++.++.++.+|+++| +|||.+++|...|+++||++++...+. ...|+++|++|+.++
T Consensus 4 ~i~~~i~~il~~~~~~~~~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~~ 79 (80)
T 1dv5_A 4 AIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA 79 (80)
T ss_dssp HHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCcccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHHc
Confidence 4677899999999999878899999999999 999999999999999999999999988 899999999999753
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.2e-07 Score=107.34 Aligned_cols=142 Identities=13% Similarity=0.134 Sum_probs=91.0
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++|||||+|+||.++++.|+++|..++++.++........+.+...+ +.++.+|++|.+++.++++ .+|.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~--v~~v~~Dl~d~~~l~~a~~-------~~d~ 82 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLG--AIIVKGELDEHEKLVELMK-------KVDV 82 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTT--CEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCC--CEEEEecCCCHHHHHHHHc-------CCCE
Confidence 479999999999999999999999765555444332333334454444 6778999999988877764 4899
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-----CCCChhhhH
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-----DFGSCDYAM 391 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g-----~~g~~~Yaa 391 (1152)
|||+||... +.+..++.+++.. . +...+|| +|+...... .++...| .
T Consensus 83 vi~~a~~~~--------------------~~~~~~l~~aa~~----~--g~v~~~v-~S~~g~~~~~~~~~~p~~~~y-~ 134 (318)
T 2r6j_A 83 VISALAFPQ--------------------ILDQFKILEAIKV----A--GNIKRFL-PSDFGVEEDRINALPPFEALI-E 134 (318)
T ss_dssp EEECCCGGG--------------------STTHHHHHHHHHH----H--CCCCEEE-CSCCSSCTTTCCCCHHHHHHH-H
T ss_pred EEECCchhh--------------------hHHHHHHHHHHHh----c--CCCCEEE-eeccccCcccccCCCCcchhH-H
Confidence 999998531 4455666666422 1 2245676 344321111 1223468 8
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
+|..++.+.+ ..++ +++.+..+.+
T Consensus 135 sK~~~e~~~~---~~~~------~~~~lr~~~~ 158 (318)
T 2r6j_A 135 RKRMIRRAIE---EANI------PYTYVSANCF 158 (318)
T ss_dssp HHHHHHHHHH---HTTC------CBEEEECCEE
T ss_pred HHHHHHHHHH---hcCC------CeEEEEccee
Confidence 9998887764 2333 5556665544
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.3e-07 Score=114.64 Aligned_cols=185 Identities=15% Similarity=0.020 Sum_probs=119.0
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+++|||||+|.||..+++.|+++|.. |+.+.|+.... ..+.+|+.+. ..+.+..+|
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~-V~~l~R~~~~~-------------~~v~~d~~~~---------~~~~l~~~D 203 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHE-VIQLVRKEPKP-------------GKRFWDPLNP---------ASDLLDGAD 203 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESSSCCT-------------TCEECCTTSC---------CTTTTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCCCCc-------------cceeecccch---------hHHhcCCCC
Confidence 578999999999999999999999885 55555553221 1256787642 133456899
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-C-----------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-D----------- 383 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g-~----------- 383 (1152)
.|||+||... .. ..+.+.....+++|+.|+.+|.+++. .......||++||+..+ | .
T Consensus 204 ~Vih~A~~~~-~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a------~~~~~~r~V~~SS~~vy-g~~~~~~~~~E~~~ 272 (516)
T 3oh8_A 204 VLVHLAGEPI-FG---RFNDSHKEAIRESRVLPTKFLAELVA------ESTQCTTMISASAVGFY-GHDRGDEILTEESE 272 (516)
T ss_dssp EEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHH------HCSSCCEEEEEEEGGGG-CSEEEEEEECTTSC
T ss_pred EEEECCCCcc-cc---ccchhHHHHHHHHHHHHHHHHHHHHH------hcCCCCEEEEeCcceEe-cCCCCCCccCCCCC
Confidence 9999999754 22 44556678899999999999999743 22345689999996543 3 1
Q ss_pred CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHh--hc--------C---CCCCC
Q psy616 384 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFK--SS--------K---QKVLH 450 (1152)
Q Consensus 384 ~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~--~~--------g---~~~l~ 450 (1152)
.+...|+..|...+.+..+.+..++ +++.+..+..-+.+- ........ .. | ...+.
T Consensus 273 ~~~~~y~~~~~~~E~~~~~~~~~gi------~~~ilRp~~v~Gp~~-----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~ 341 (516)
T 3oh8_A 273 SGDDFLAEVCRDWEHATAPASDAGK------RVAFIRTGVALSGRG-----GMLPLLKTLFSTGLGGKFGDGTSWFSWIA 341 (516)
T ss_dssp CCSSHHHHHHHHHHHTTHHHHHTTC------EEEEEEECEEEBTTB-----SHHHHHHHTTC---CCCCTTSCCEECEEE
T ss_pred CCcChHHHHHHHHHHHHHHHHhCCC------CEEEEEeeEEECCCC-----ChHHHHHHHHHhCCCcccCCCCceEceEe
Confidence 1345677777777766666655554 777777765543220 00000000 00 1 13456
Q ss_pred HHHHHHHHHHHHhcC
Q psy616 451 ENDGLKLFEQLLIQD 465 (1152)
Q Consensus 451 ~~e~~~~l~~~l~~~ 465 (1152)
.++.++++..++..+
T Consensus 342 v~Dva~ai~~~l~~~ 356 (516)
T 3oh8_A 342 IDDLTDIYYRAIVDA 356 (516)
T ss_dssp HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCc
Confidence 788888888887654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.59 E-value=2.5e-07 Score=103.93 Aligned_cols=142 Identities=12% Similarity=0.123 Sum_probs=90.7
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-h--HHH---HHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-N--SII---YKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~--~~~---~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
.++++||||+|+||.++++.|+++|..+++ +.|+.. . .+. .+.+... .+.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~-l~R~~~~~~~~~~~~~~~~l~~~--~v~~v~~D~~d~~~l~~~~~---- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFL-LVRESTASSNSEKAQLLESFKAS--GANIVHGSIDDHASLVEAVK---- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEE-ECCCCCTTTTHHHHHHHHHHHTT--TCEEECCCTTCHHHHHHHHH----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEE-EECCcccccCHHHHHHHHHHHhC--CCEEEEeccCCHHHHHHHHc----
Confidence 467999999999999999999999975555 455421 1 222 2233333 46788999999998887765
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-----CC
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-----DF 384 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g-----~~ 384 (1152)
.+|.|||+||... +.+..++.+++.. . +...+|| +|+...... .+
T Consensus 77 ---~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~----~--g~v~~~v-~S~~g~~~~~~~~~~p 126 (308)
T 1qyc_A 77 ---NVDVVISTVGSLQ--------------------IESQVNIIKAIKE----V--GTVKRFF-PSEFGNDVDNVHAVEP 126 (308)
T ss_dssp ---TCSEEEECCCGGG--------------------SGGGHHHHHHHHH----H--CCCSEEE-CSCCSSCTTSCCCCTT
T ss_pred ---CCCEEEECCcchh--------------------hhhHHHHHHHHHh----c--CCCceEe-ecccccCccccccCCc
Confidence 4899999998532 3455566666422 1 2245676 454321111 12
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
+...| .+|..++.+.+. .++ +++.+..+.+
T Consensus 127 ~~~~y-~sK~~~e~~~~~---~~~------~~~~~r~~~~ 156 (308)
T 1qyc_A 127 AKSVF-EVKAKVRRAIEA---EGI------PYTYVSSNCF 156 (308)
T ss_dssp HHHHH-HHHHHHHHHHHH---HTC------CBEEEECCEE
T ss_pred chhHH-HHHHHHHHHHHh---cCC------CeEEEEecee
Confidence 34568 899988877653 333 5566665544
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=98.55 E-value=6.4e-07 Score=99.49 Aligned_cols=179 Identities=12% Similarity=0.063 Sum_probs=107.7
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
+++||||+ |.||..+++.|+++|.. |+.+.|++... ..+.. ..+.++.+|++|.+ +..+|.
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~-V~~~~r~~~~~---~~~~~--~~~~~~~~D~~d~~------------~~~~d~ 66 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWR-IIGTSRNPDQM---EAIRA--SGAEPLLWPGEEPS------------LDGVTH 66 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCE-EEEEESCGGGH---HHHHH--TTEEEEESSSSCCC------------CTTCCE
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCE-EEEEEcChhhh---hhHhh--CCCeEEEecccccc------------cCCCCE
Confidence 67999998 99999999999999874 55555654332 22222 34888999999821 567999
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-----------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG----------- 385 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g----------- 385 (1152)
|||+||... .. .. .+.++.+++ ++. ......||++||... +|...
T Consensus 67 vi~~a~~~~-~~-----~~------------~~~~l~~a~----~~~-~~~~~~~v~~Ss~~v-yg~~~~~~~~E~~~~~ 122 (286)
T 3ius_A 67 LLISTAPDS-GG-----DP------------VLAALGDQI----AAR-AAQFRWVGYLSTTAV-YGDHDGAWVDETTPLT 122 (286)
T ss_dssp EEECCCCBT-TB-----CH------------HHHHHHHHH----HHT-GGGCSEEEEEEEGGG-GCCCTTCEECTTSCCC
T ss_pred EEECCCccc-cc-----cH------------HHHHHHHHH----Hhh-cCCceEEEEeeccee-cCCCCCCCcCCCCCCC
Confidence 999999765 22 00 112333432 221 124567999999754 33321
Q ss_pred -ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccc--cc-c-ccchhHHhhcCCCCCCHHHHHHHHHH
Q psy616 386 -SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKI--GN-N-EQTDFYFKSSKQKVLHENDGLKLFEQ 460 (1152)
Q Consensus 386 -~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~--~~-~-~~~~~~~~~~g~~~l~~~e~~~~l~~ 460 (1152)
...|+.+|...+.+.+.. .++ +++.+..+..-+.+... .. . ..........-...+..++..+++..
T Consensus 123 p~~~Y~~sK~~~E~~~~~~--~~~------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 194 (286)
T 3ius_A 123 PTAARGRWRVMAEQQWQAV--PNL------PLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAA 194 (286)
T ss_dssp CCSHHHHHHHHHHHHHHHS--TTC------CEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhh--cCC------CEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHH
Confidence 346999999999888765 233 56666655443322100 00 0 00000000112345677888888888
Q ss_pred HHhcCc
Q psy616 461 LLIQDK 466 (1152)
Q Consensus 461 ~l~~~~ 466 (1152)
++..+.
T Consensus 195 ~~~~~~ 200 (286)
T 3ius_A 195 SMARPD 200 (286)
T ss_dssp HHHSCC
T ss_pred HHhCCC
Confidence 887653
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A | Back alignment and structure |
|---|
Probab=98.51 E-value=1.2e-07 Score=110.70 Aligned_cols=69 Identities=14% Similarity=0.156 Sum_probs=63.9
Q ss_pred cEEEEeecCCHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH-hcCCCCCcEEEEEeCCHHHHHHHHHHhh
Q psy616 1069 YHMVVLSAKTKISLKEKMKQILLFLRKNNTVCIENFVYTLM-QGRHHFQYRCAIIISSIEEVVKIINDTL 1137 (1152)
Q Consensus 1069 ~~l~~lSa~~~~~l~~~~~~l~~~l~~~~~~~l~d~a~tl~-~~r~~~~~R~a~~~~~~~~l~~~l~~~~ 1137 (1152)
++||+|||+|+++|++++++|.+||+.++...|.|+||||+ ++|.||+||++++++|.+||.++|+.+.
T Consensus 3 ~~ll~lSA~s~~aL~~~~~~l~~~l~~~~~~~l~dla~tl~~~rr~~~~~R~avva~~~~~l~~~L~~~~ 72 (401)
T 4amm_A 3 HELVVCGAPDAAALTGLLTRVRAAATALSRPELTDLAAGLAAAHRGDVPARFAAAVRDADGLVAALDRAL 72 (401)
T ss_dssp SEEEEEEESSHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHSCSSCSEEEEEEESSHHHHHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccccCCCceEEEEECCHHHHHHHHHHHH
Confidence 47999999999999999999999999887778999999999 6789999999999999999999998754
|
| >3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma} | Back alignment and structure |
|---|
Probab=98.45 E-value=2.5e-07 Score=86.93 Aligned_cols=76 Identities=14% Similarity=0.270 Sum_probs=69.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCcc------ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHH
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLA------DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 575 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~------elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~ 575 (1152)
...+.+.|++++++.++ +.++|+++.+|+ +||+|||..++|...|+++||++|+...+.+..|+.+|++|+.+
T Consensus 17 ~~~i~~~i~~il~e~l~-~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 95 (107)
T 3ce7_A 17 INAVTNYIVGMCQKFLQ-KGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADFVVS 95 (107)
T ss_dssp HHHHHHHHHHHHHTTBC-TTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-CccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHHHHH
Confidence 45678889999999999 888999999994 89999999999999999999999999999999999999999987
Q ss_pred hhh
Q psy616 576 NHN 578 (1152)
Q Consensus 576 ~~~ 578 (1152)
+..
T Consensus 96 ~~~ 98 (107)
T 3ce7_A 96 ERA 98 (107)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=3.6e-08 Score=110.17 Aligned_cols=107 Identities=15% Similarity=0.121 Sum_probs=75.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++++|||||+||||+++++.|+++|+. |+++.|+. ..+++.+++... ..+.++.+|++|.++++++++ .
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~ 188 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK-------G 188 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT-------T
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH-------h
Confidence 4689999999999999999999999986 77777773 334455555432 135678899999988776654 3
Q ss_pred eeEEEEcccccCcCcccccCCH-HHHHHHHhhhchHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANY-KNFYSVLSSKISGTI 350 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~-e~~~~~~~~kv~g~~ 350 (1152)
+|+||||||+.....++.+.+. ++|..++++|+.+++
T Consensus 189 ~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 189 AHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp CSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred CCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 7999999986431222323332 455566777777655
|
| >2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=98.43 E-value=3.9e-07 Score=85.22 Aligned_cols=73 Identities=15% Similarity=0.259 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHhCCC--CcccccCCCcc-ccCC-chHHHHHHHHHHHHhcCcccCceecc--cCCCHHHHHHHHHHhh
Q psy616 505 IENDIKNHICNILNTK--KSEIYKNKNLA-DYGF-DSISLAEFSRILSKFYSLDIMPSIFF--SYSTLERLITYFIKNH 577 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~--~~~i~~~~~f~-elGl-DSL~aveL~~~l~~~fgv~L~~~~lf--~~~Ti~~La~~L~~~~ 577 (1152)
+.+.|++.+++.++++ +++|+++.+|+ ++|+ |||..++|...|+++||++++..++. ...|+.+|++|+.++.
T Consensus 25 i~~~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv~~l~~~I~~~~ 103 (105)
T 2lki_A 25 HLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKL 103 (105)
T ss_dssp THHHHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCHHHHHHHHHHHh
Confidence 4567899999999998 78899999998 5999 99999999999999999999999854 6899999999998753
|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
Probab=98.38 E-value=2.1e-07 Score=112.90 Aligned_cols=73 Identities=16% Similarity=0.233 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
...++..|.++|+++|+++ +|+.+++||+||+|||+++++..++++.||++|++.++|++|||.+|++++.+.
T Consensus 8 ~~~~e~~l~~iw~~vL~~~--~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~ 80 (520)
T 2jgp_A 8 RSVWEARLAQVWEQVLNVP--QVGALDDFFALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEET 80 (520)
T ss_dssp CSHHHHHHHHHHHHHHTCS--CCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHhCCC--CCCCCccHHHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence 3456788999999999986 689999999999999999999999999999999999999999999999998753
|
| >1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=98.38 E-value=2.8e-08 Score=91.01 Aligned_cols=73 Identities=18% Similarity=0.299 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhCC--------CCcccccCCCccccCCchHHHHHHHHHHHHhcCcccC---ceecccCCCHHHHHHHH
Q psy616 505 IENDIKNHICNILNT--------KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIM---PSIFFSYSTLERLITYF 573 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~--------~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~---~~~lf~~~Ti~~La~~L 573 (1152)
+.+.++++++++++. ++++|+++.+|.+||+|||.+++|...|+++||++++ ...+++.+|+.+|++|+
T Consensus 5 i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~~i 84 (92)
T 1fh1_A 5 LTLEIISAINKLVKAENGERTSVALGEITTDTELTSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVEAV 84 (92)
T ss_dssp CHHHHHHHHHHHC----------------------------CTTTTHHHHHHHC-----------------CTTTSTHHH
T ss_pred HHHHHHHHHHHHHHhccccccCCCHhhCCCCCCHhhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHHHH
Confidence 455688888888884 4448999999999999999999999999999999999 78899999999999999
Q ss_pred HHhh
Q psy616 574 IKNH 577 (1152)
Q Consensus 574 ~~~~ 577 (1152)
.++.
T Consensus 85 ~~~~ 88 (92)
T 1fh1_A 85 RGLL 88 (92)
T ss_dssp HC--
T ss_pred HHHh
Confidence 7654
|
| >2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=98.36 E-value=1e-06 Score=80.29 Aligned_cols=75 Identities=8% Similarity=0.110 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCce-ecccCCCHHHHHHHHHHhhh
Q psy616 504 FIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPS-IFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 504 ~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~-~lf~~~Ti~~La~~L~~~~~ 578 (1152)
.+.+.+++++++.++++++.|.++.+| .|||+|||-.++|...++++||+++|.. .-|...|+.++++||.+...
T Consensus 14 ~I~~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~~e~~~~~TV~d~vdyI~~~~~ 90 (102)
T 2l9f_A 14 GALELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAMPTNFATATVREMAEALEARER 90 (102)
T ss_dssp CHHHHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSSCSCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCccHHHHHHccHHHHHHHHHHhhc
Confidence 367789999999999999999999995 7899999999999999999999998653 23566999999999987543
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.29 E-value=8.7e-08 Score=116.04 Aligned_cols=74 Identities=15% Similarity=0.329 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 501 IEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 501 ~~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
+...+++.|.++|+++|+++ +|+.+++||++|+|||++++|..+|++ ||++|++.++|++|||++|+++|.+..
T Consensus 42 p~~~~e~~l~~~w~~~l~~~--~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~ 115 (508)
T 4f6l_B 42 PSNEIEQTFVDVFGEVLKQN--DVGVDDDFFELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQ 115 (508)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCChHHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhc
Confidence 34457788999999999986 689999999999999999999999986 999999999999999999999997653
|
| >2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.26 E-value=5.5e-07 Score=85.09 Aligned_cols=71 Identities=21% Similarity=0.175 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCc-cccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNL-ADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f-~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
+.+.+.|++++++.++ |+++.+| .+||+|||..++|...|+++||++|+..++.+..|+.+|++||.++..
T Consensus 29 ~ei~~~v~~il~e~l~-----I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~~I~~~l~ 100 (113)
T 2cgq_A 29 EAINATIQRILRTDRG-----ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWFP 100 (113)
T ss_dssp HHHHHHHHHHHTCCSC-----CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHhC-----CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHHHHHHHHh
Confidence 3466677777777776 7888999 799999999999999999999999999999999999999999987654
|
| >4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=1.5e-07 Score=116.71 Aligned_cols=72 Identities=7% Similarity=-0.008 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHH-hcCcccCceecccCCCHHHHHHHHHHh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSK-FYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~-~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
...++.+.++|+++|+++ .++.+++||++|+|||++++|.++|++ .||++|++.++|++|||++||++|.+.
T Consensus 523 ~~~e~~l~~iw~~vL~~~--~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~ 595 (620)
T 4dg8_A 523 DPDQRGCAQLWSELLGCE--VGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSH 595 (620)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHhCCC--CCCCCCChhhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhc
Confidence 346677899999999985 578899999999999999999999999 899999999999999999999999654
|
| >2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.18 E-value=7.6e-07 Score=99.30 Aligned_cols=67 Identities=21% Similarity=0.349 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHH
Q psy616 506 ENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFI 574 (1152)
Q Consensus 506 ~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~ 574 (1152)
.+++++.++++| +++++|+.+++|++||+|||.+++|..++++. |++++.+++|++||+++++++|.
T Consensus 217 ~dwlr~~va~~L-~~~~~i~~~~nL~~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 217 KAALREVILPLL-DESDEPFDDDNLIDYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp HHHHHHHHGGGC-CCSSCCCTTSCSGGGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCHhhcCCCCCHHHhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHH
Confidence 357888999999 98889999999999999999999999999998 99999999999999999999996
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=2.7e-06 Score=90.39 Aligned_cols=81 Identities=16% Similarity=0.194 Sum_probs=59.5
Q ss_pred CCCEEEEECC----------------chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy616 235 QGGTYLITGG----------------TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 298 (1152)
Q Consensus 235 ~~~~~LITGg----------------~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~ 298 (1152)
.++++||||| +||||.++|+.|+++|+.++++.++.... . ..| + -.+|+++.+
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~------~-~~g--~--~~~dv~~~~ 75 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP------T-PPF--V--KRVDVMTAL 75 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC------C-CTT--E--EEEECCSHH
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc------c-CCC--C--eEEccCcHH
Confidence 5899999999 69999999999999999666554443211 0 112 2 357888865
Q ss_pred HHHHHHHHHHhhcCCeeEEEEcccccCcCccc
Q psy616 299 KMISEINSIINNIGPIDGVLHIAGISGLTSNI 330 (1152)
Q Consensus 299 ~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~ 330 (1152)
+ +++.+.+.+|++|++|||||+.. ..++
T Consensus 76 ~---~~~~v~~~~~~~Dili~~Aav~d-~~p~ 103 (226)
T 1u7z_A 76 E---MEAAVNASVQQQNIFIGCAAVAD-YRAA 103 (226)
T ss_dssp H---HHHHHHHHGGGCSEEEECCBCCS-EEES
T ss_pred H---HHHHHHHhcCCCCEEEECCcccC-CCCc
Confidence 5 45666777899999999999875 4443
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.5e-06 Score=117.10 Aligned_cols=73 Identities=15% Similarity=0.229 Sum_probs=67.5
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHH
Q psy616 501 IEKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIK 575 (1152)
Q Consensus 501 ~~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~ 575 (1152)
+...+++.|.++|+++|+++ +|+.+++||++|+|||++++|.++|++.||++|+..++|++|||++|+++|.+
T Consensus 969 p~~~~e~~l~~~~~~vL~~~--~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~ 1041 (1304)
T 2vsq_A 969 PRNEMEETIAQIWSEVLGRK--QIGIHDDFFALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKN 1041 (1304)
T ss_dssp CSSHHHHHHHHHHHHHHTCS--CCCTTCCTTTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHcCCC--ccCCCCCHHHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHh
Confidence 34567889999999999985 68899999999999999999999999999999999999999999999999965
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.09 E-value=1.4e-06 Score=108.07 Aligned_cols=69 Identities=20% Similarity=0.354 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 506 ENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 506 ~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+..+.+.|+++|+. .+++..+++||++|+|||++++|.++|++ ++.+|+..++|++|||++|+++|.++
T Consensus 547 ~~~l~~~~~~~l~~-~~~~~~~d~Ff~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~~ 615 (617)
T 3rg2_A 547 KAALREVILPLLDE-SDEPFDDDNLIDYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSRE 615 (617)
T ss_dssp HHHHHHHHGGGSCT-TCCCCTTSCGGGGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhcc-CCCCCCCCChhhcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHhh
Confidence 45688889999874 34688899999999999999999999987 68899999999999999999998653
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.06 E-value=6.6e-06 Score=87.61 Aligned_cols=93 Identities=12% Similarity=0.225 Sum_probs=63.5
Q ss_pred CCCEEEEECC----------------chhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHH
Q psy616 235 QGGTYLITGG----------------TGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 298 (1152)
Q Consensus 235 ~~~~~LITGg----------------~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~ 298 (1152)
.++++||||| +|++|.++|+.++++|+.++++.++..... .....+ ...|+.+
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~~~~--~~~~v~s-- 70 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPHPNL--SIREITN-- 70 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCCTTE--EEEECCS--
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCCCCe--EEEEHhH--
Confidence 5789999999 889999999999999996655555433211 001123 2345555
Q ss_pred HHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHH
Q psy616 299 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYS 340 (1152)
Q Consensus 299 ~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~ 340 (1152)
+.++++.+.+.++++|++||||++.. ..+....+.+++..
T Consensus 71 -~~em~~~v~~~~~~~Dili~aAAvsD-~~p~~~~~~e~~~~ 110 (232)
T 2gk4_A 71 -TKDLLIEMQERVQDYQVLIHSMAVSD-YTPVYMTGLEEVQA 110 (232)
T ss_dssp -HHHHHHHHHHHGGGCSEEEECSBCCS-EEEEEEEEHHHHHH
T ss_pred -HHHHHHHHHHhcCCCCEEEEcCcccc-ccchhhcchhhhhc
Confidence 44555666667889999999999987 66665555655543
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=6e-06 Score=83.35 Aligned_cols=78 Identities=13% Similarity=-0.031 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHHcCCcEEEEecCCcch---HHHHHHHHhCCCcEEEEEecCCCH--HHHHHHHHHHHhhcCCeeEEEEcc
Q psy616 247 RLGMLFSDYLINKYSTNLILSGRSKLN---SIIYKKLKKFNNKAIYIQVDVSDK--LKMISEINSIINNIGPIDGVLHIA 321 (1152)
Q Consensus 247 GIG~~lA~~La~~Ga~~vil~~R~~~~---~~~~~~l~~~g~~v~~~~~Dvsd~--~~v~~~~~~~~~~~G~idgvIh~A 321 (1152)
-++.++++.|++.|+++||........ .+..+.+++.|.++..+++|++++ ++++++++.+.+++|+ |++||||
T Consensus 27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnA 105 (157)
T 3gxh_A 27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCL 105 (157)
T ss_dssp CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECS
T ss_pred CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECC
Confidence 467899999999999777654433222 124556777899999999999999 9999999999999999 9999999
Q ss_pred cccC
Q psy616 322 GISG 325 (1152)
Q Consensus 322 G~~~ 325 (1152)
|...
T Consensus 106 gg~r 109 (157)
T 3gxh_A 106 ANYR 109 (157)
T ss_dssp BSHH
T ss_pred CCCC
Confidence 9754
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.2e-05 Score=95.53 Aligned_cols=173 Identities=14% Similarity=0.129 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCC----ccccccc
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGP----VMAINTA 794 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GP----s~tvdta 794 (1152)
.-+..+++.+||+++|+++++++ -+++|+.+.++... ..+..|...|++.|. ++=+..|
T Consensus 55 ~~ma~~Aa~~al~~a~i~~~~Id----~ii~aT~t~~~~~p-------------s~a~~v~~~l~~~g~~~~~a~D~~~a 117 (460)
T 2wya_A 55 NSLCLTVVQRLMERIQLPWDSVG----RLEVGTETIIDKSK-------------AVKTVLMELFQDSGNTDIEGIDTTNA 117 (460)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEE----EEEEECSCCSCSSS-------------CHHHHHGGGTGGGTCCCCBCCEEESG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCCCC-------------chHHHHHHHHhccCCCCeeEechhhh
Confidence 34889999999999999887765 47778766543211 245677788887663 3557789
Q ss_pred chhHHHHHHHHHHHHHcCCCCE--EEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccch
Q psy616 795 CSSSLVATHIACQSLRQHECDT--AISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 872 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~--alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~ 872 (1152)
|++++.||..|...|++|..+. +|+++.++. .+.........|.|++++++.+-..
T Consensus 118 C~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~~----------------------~~~d~~~~~~~GdGA~A~l~~~~~~ 175 (460)
T 2wya_A 118 CYGGTASLFNAANWMESSSWDGRYAMVVCGDIA----------------------VYPSGNARPTGGAGAVAMLIGPKAP 175 (460)
T ss_dssp GGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----------------------CCCSSTTGGGCEEEEEEEEEESSCS
T ss_pred hhhHHHHHHHHHHHHHhccccceEEEEEecccc----------------------ccccccccccCcchHHhhhcccCCc
Confidence 9999999999999999998764 454444431 1122233445689999999876433
Q ss_pred hhcCCCceEEEEEEEEEecCC--CCC--CCCCCC--HH-------------------HHHHHHHHHHHHcCCCCCCccEE
Q psy616 873 ALSDGDPIHAIIRGSGINYDG--KTN--GITAPN--GI-------------------SQTELIKSVYKKSNLNPEDINYI 927 (1152)
Q Consensus 873 A~~dgd~i~avI~g~a~~~dG--~~~--~~~~P~--~~-------------------~q~~~i~~al~~Agi~p~dI~yv 927 (1152)
...... ..++...+.. ... +...|. +. .....++++++++|++++|++|+
T Consensus 176 ~~~~~~-----~~~~~~~~~~df~~p~~~s~~~~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~~~~d~d~~ 250 (460)
T 2wya_A 176 LALERG-----LRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYM 250 (460)
T ss_dssp EEECTT-----CCEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGCSEE
T ss_pred ceeecc-----cccccccchhhhhccCCCCCCcccCCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhh
Confidence 221111 1122221111 011 111121 11 01123445556789999999999
Q ss_pred EecCCCCC
Q psy616 928 ITHGTGTK 935 (1152)
Q Consensus 928 e~hgtgT~ 935 (1152)
-.|-.-.+
T Consensus 251 v~Hqp~~r 258 (460)
T 2wya_A 251 IFHTPFCK 258 (460)
T ss_dssp EECCSSHH
T ss_pred hhcccchH
Confidence 99977655
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0001 Score=82.24 Aligned_cols=109 Identities=19% Similarity=0.208 Sum_probs=73.3
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
.+|||||+|=||..+++.|.++|..++++. |++.. .. +..| .+ ..+.+..+|.|
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~-R~~~~-----------~~---~~~~-----~~------~~~~l~~~d~v 55 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVS-RKPGP-----------GR---ITWD-----EL------AASGLPSCDAA 55 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE-SSCCT-----------TE---EEHH-----HH------HHHCCCSCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEE-CCCCc-----------Ce---eecc-----hh------hHhhccCCCEE
Confidence 489999999999999999999998665554 54321 11 1111 11 11335679999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 378 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a 378 (1152)
||+||... .......+.+..+..+..++.++.+|.+++. ....+...||+.||+.
T Consensus 56 ihla~~~i-~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~-----~~~~~~~~~i~~Ss~~ 110 (298)
T 4b4o_A 56 VNLAGENI-LNPLRRWNETFQKEVLGSRLETTQLLAKAIT-----KAPQPPKAWVLVTGVA 110 (298)
T ss_dssp EECCCCCS-SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHH-----HCSSCCSEEEEEEEGG
T ss_pred EEeccCcc-cchhhhhhhhhhhhhhhHHHHHHHHHHHHHH-----HhCCCceEEEEEeeee
Confidence 99998643 3344455777888899999999999988753 2233344566656544
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00013 Score=68.96 Aligned_cols=75 Identities=17% Similarity=0.305 Sum_probs=57.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++.++|+|+ |++|..+++.|.++|...|+++.|++.. .+.+...+ +.++.+|+++.+++.+++ ..+|
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~---~~~~~~~~--~~~~~~d~~~~~~~~~~~-------~~~d 71 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAA---LAVLNRMG--VATKQVDAKDEAGLAKAL-------GGFD 71 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHH---HHHHHTTT--CEEEECCTTCHHHHHHHT-------TTCS
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHH---HHHHHhCC--CcEEEecCCCHHHHHHHH-------cCCC
Confidence 468999999 9999999999999995678888886432 23333333 556889999988776655 2689
Q ss_pred EEEEcccc
Q psy616 316 GVLHIAGI 323 (1152)
Q Consensus 316 gvIh~AG~ 323 (1152)
.|||+++.
T Consensus 72 ~vi~~~~~ 79 (118)
T 3ic5_A 72 AVISAAPF 79 (118)
T ss_dssp EEEECSCG
T ss_pred EEEECCCc
Confidence 99999963
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00027 Score=73.77 Aligned_cols=81 Identities=16% Similarity=0.035 Sum_probs=56.2
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++++|||||+||||+++++.+...|+ +|+.+.|++. ..+.+++.|... .+|.++.+..+.+.+... .+
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~---~~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~--~~ 106 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDA---KREMLSRLGVEY---VGDSRSVDFADEILELTD--GY 106 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHH---HHHHHHTTCCSE---EEETTCSTHHHHHHHHTT--TC
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHH---HHHHHHHcCCCE---EeeCCcHHHHHHHHHHhC--CC
Confidence 56789999999999999999999999998 5666666542 223345556542 257777654444433321 13
Q ss_pred CeeEEEEccc
Q psy616 313 PIDGVLHIAG 322 (1152)
Q Consensus 313 ~idgvIh~AG 322 (1152)
.+|.||+|+|
T Consensus 107 ~~D~vi~~~g 116 (198)
T 1pqw_A 107 GVDVVLNSLA 116 (198)
T ss_dssp CEEEEEECCC
T ss_pred CCeEEEECCc
Confidence 6999999997
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00032 Score=81.99 Aligned_cols=82 Identities=20% Similarity=0.193 Sum_probs=64.8
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCC--cEEEEecCCc-chHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYS--TNLILSGRSK-LNSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga--~~vil~~R~~-~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+.++|+|+ ||||.++++.|+++|. ..|++.+|+. ..+++.+++... +.++..+.+|++|.+++++++++.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence 46899998 8999999999999985 4787888874 334455555543 246788999999999999998875
Q ss_pred CeeEEEEccccc
Q psy616 313 PIDGVLHIAGIS 324 (1152)
Q Consensus 313 ~idgvIh~AG~~ 324 (1152)
++|.||||+|..
T Consensus 76 ~~DvVin~ag~~ 87 (405)
T 4ina_A 76 KPQIVLNIALPY 87 (405)
T ss_dssp CCSEEEECSCGG
T ss_pred CCCEEEECCCcc
Confidence 689999999853
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00028 Score=80.00 Aligned_cols=147 Identities=12% Similarity=-0.033 Sum_probs=91.9
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCC------cEEEEecCCcch---HHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHH
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYS------TNLILSGRSKLN---SIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSI 307 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga------~~vil~~R~~~~---~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~ 307 (1152)
..++||||+|.||..++..|+++|. ..|+++.+.+.. +.....+......+ + .|+.+.+++.+.+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a~--- 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVAF--- 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHHT---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHHh---
Confidence 4699999999999999999999885 267777765321 11222343322122 2 4665543333322
Q ss_pred HhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-------
Q psy616 308 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI------- 380 (1152)
Q Consensus 308 ~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~------- 380 (1152)
...|.|||+||... . + ..+. ...+..|+.++.++.+++... . .+..+|+++||....
T Consensus 79 ----~~~D~Vih~Ag~~~-~-~--~~~~---~~~~~~Nv~~t~~l~~a~~~~----~-~~~~~vvv~snp~~~~~~~~~~ 142 (327)
T 1y7t_A 79 ----KDADYALLVGAAPR-K-A--GMER---RDLLQVNGKIFTEQGRALAEV----A-KKDVKVLVVGNPANTNALIAYK 142 (327)
T ss_dssp ----TTCSEEEECCCCCC-C-T--TCCH---HHHHHHHHHHHHHHHHHHHHH----S-CTTCEEEECSSSHHHHHHHHHH
T ss_pred ----CCCCEEEECCCcCC-C-C--CCCH---HHHHHHHHHHHHHHHHHHHhh----c-CCCeEEEEeCCchhhhHHHHHH
Confidence 35899999999865 2 1 2344 347899999999999986432 1 133478888875421
Q ss_pred -c-CCCCChhhhHHHHHHHHHHHHHHh
Q psy616 381 -L-GDFGSCDYAMGNRFQTVYAKYLNN 405 (1152)
Q Consensus 381 -~-g~~g~~~Yaaana~l~~la~~~~~ 405 (1152)
. +.+....|+.+|..-+.+.....+
T Consensus 143 ~~~~~~p~~~yg~tkl~~er~~~~~a~ 169 (327)
T 1y7t_A 143 NAPGLNPRNFTAMTRLDHNRAKAQLAK 169 (327)
T ss_dssp TCTTSCGGGEEECCHHHHHHHHHHHHH
T ss_pred HcCCCChhheeccchHHHHHHHHHHHH
Confidence 1 222334698888877766655443
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0003 Score=79.85 Aligned_cols=81 Identities=16% Similarity=0.180 Sum_probs=58.7
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++++||||++||||+.+++.+...|+ +|+++.+++.. .+.+++.|... .+|.++.+++.+.+.++.. +
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~---~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~--~ 213 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEK---IAYLKQIGFDA---AFNYKTVNSLEEALKKASP--D 213 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHH---HHHHHHTTCSE---EEETTSCSCHHHHHHHHCT--T
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHH---HHHHHhcCCcE---EEecCCHHHHHHHHHHHhC--C
Confidence 56789999999999999999999999998 66666665422 23334556542 3588774455555555543 5
Q ss_pred CeeEEEEccc
Q psy616 313 PIDGVLHIAG 322 (1152)
Q Consensus 313 ~idgvIh~AG 322 (1152)
.+|.||+|+|
T Consensus 214 ~~d~vi~~~g 223 (333)
T 1v3u_A 214 GYDCYFDNVG 223 (333)
T ss_dssp CEEEEEESSC
T ss_pred CCeEEEECCC
Confidence 8999999998
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0011 Score=75.71 Aligned_cols=82 Identities=13% Similarity=0.227 Sum_probs=59.8
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++++||+|++||||+.+++.+...|+ +|+.+.|++... +.+++.|... .+|+++.+++.+.+.++...
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~---~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~~-- 237 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKE---ELFRSIGGEV---FIDFTKEKDIVGAVLKATDG-- 237 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHH---HHHHHTTCCE---EEETTTCSCHHHHHHHHHTS--
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHH---HHHHHcCCce---EEecCccHhHHHHHHHHhCC--
Confidence 56789999999999999999999999998 666666654332 2334456542 34887656666666665543
Q ss_pred CeeEEEEcccc
Q psy616 313 PIDGVLHIAGI 323 (1152)
Q Consensus 313 ~idgvIh~AG~ 323 (1152)
.+|.||+++|.
T Consensus 238 ~~D~vi~~~g~ 248 (347)
T 2hcy_A 238 GAHGVINVSVS 248 (347)
T ss_dssp CEEEEEECSSC
T ss_pred CCCEEEECCCc
Confidence 79999999984
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0017 Score=73.46 Aligned_cols=81 Identities=12% Similarity=0.085 Sum_probs=56.0
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++++|||||+||||+.+++.+...|+ +|+.+.|++... +.+++.|... .+|.++.+..+++.+... .+
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~---~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~ 208 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKA---QSALKAGAWQ---VINYREEDLVERLKEITG--GK 208 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHH---HHHHHHTCSE---EEETTTSCHHHHHHHHTT--TC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH---HHHHHcCCCE---EEECCCccHHHHHHHHhC--CC
Confidence 45789999999999999999999999998 666666664322 2333446543 247776554444443321 13
Q ss_pred CeeEEEEccc
Q psy616 313 PIDGVLHIAG 322 (1152)
Q Consensus 313 ~idgvIh~AG 322 (1152)
.+|.||+|+|
T Consensus 209 ~~D~vi~~~g 218 (327)
T 1qor_A 209 KVRVVYDSVG 218 (327)
T ss_dssp CEEEEEECSC
T ss_pred CceEEEECCc
Confidence 6999999998
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.002 Score=73.01 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=56.1
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++++|||||+||||+.+++.+...|+ +|+.+.|++... +.+++.|... .+|.++.+..+++.+.. . ..
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~---~~~~~~g~~~---~~d~~~~~~~~~i~~~~-~-~~ 213 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKA---ETARKLGCHH---TINYSTQDFAEVVREIT-G-GK 213 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHH---HHHHHHTCSE---EEETTTSCHHHHHHHHH-T-TC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHH---HHHHHcCCCE---EEECCCHHHHHHHHHHh-C-CC
Confidence 45788999999999999999999999998 666666664222 2333446543 24776654444433322 1 13
Q ss_pred CeeEEEEcccc
Q psy616 313 PIDGVLHIAGI 323 (1152)
Q Consensus 313 ~idgvIh~AG~ 323 (1152)
.+|.||+|+|.
T Consensus 214 ~~d~vi~~~g~ 224 (333)
T 1wly_A 214 GVDVVYDSIGK 224 (333)
T ss_dssp CEEEEEECSCT
T ss_pred CCeEEEECCcH
Confidence 69999999984
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0018 Score=73.86 Aligned_cols=83 Identities=19% Similarity=0.199 Sum_probs=58.2
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.+++++++||+|++||||+.+++.+...|+ +|+.+.|++. ..+.++ +.|... .+|.++.+++.+.+.++..
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~---~~~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~- 223 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKE---KVDLLKTKFGFDD---AFNYKEESDLTAALKRCFP- 223 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHH---HHHHHHHTSCCSE---EEETTSCSCSHHHHHHHCT-
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHcCCce---EEecCCHHHHHHHHHHHhC-
Confidence 356789999999999999999999998998 6776666542 223344 467643 2477664445555555432
Q ss_pred cCCeeEEEEcccc
Q psy616 311 IGPIDGVLHIAGI 323 (1152)
Q Consensus 311 ~G~idgvIh~AG~ 323 (1152)
+.+|.||+|+|.
T Consensus 224 -~~~d~vi~~~g~ 235 (345)
T 2j3h_A 224 -NGIDIYFENVGG 235 (345)
T ss_dssp -TCEEEEEESSCH
T ss_pred -CCCcEEEECCCH
Confidence 579999999974
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0032 Score=72.11 Aligned_cols=81 Identities=12% Similarity=0.122 Sum_probs=55.3
Q ss_pred ccCC--CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 233 IKQG--GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 233 ~~~~--~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
++++ +++||||++||||+.+++.+...|+.+|+.+.+++. ..+.+++ .|... .+|.++.+ +.+.+.+...
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~---~~~~~~~~~g~~~---~~d~~~~~-~~~~~~~~~~ 228 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE---KCILLTSELGFDA---AINYKKDN-VAEQLRESCP 228 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHH---HHHHHHHTSCCSE---EEETTTSC-HHHHHHHHCT
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHH---HHHHHHHHcCCce---EEecCchH-HHHHHHHhcC
Confidence 4567 899999999999999999999999866777666642 2233333 56542 35776643 3333333322
Q ss_pred hcCCeeEEEEccc
Q psy616 310 NIGPIDGVLHIAG 322 (1152)
Q Consensus 310 ~~G~idgvIh~AG 322 (1152)
+.+|.||+|+|
T Consensus 229 --~~~d~vi~~~G 239 (357)
T 2zb4_A 229 --AGVDVYFDNVG 239 (357)
T ss_dssp --TCEEEEEESCC
T ss_pred --CCCCEEEECCC
Confidence 27999999998
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.00036 Score=84.33 Aligned_cols=95 Identities=14% Similarity=0.174 Sum_probs=58.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc--
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-- 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-- 311 (1152)
.+++++|||+ ||+|++++..|++.|+ +|+++.|+.. .+++.++ .+.++. ++.| + +.+
T Consensus 363 ~~k~vlV~Ga-GGig~aia~~L~~~G~-~V~i~~R~~~~a~~la~~---~~~~~~----~~~d---l--------~~~~~ 422 (523)
T 2o7s_A 363 ASKTVVVIGA-GGAGKALAYGAKEKGA-KVVIANRTYERALELAEA---IGGKAL----SLTD---L--------DNYHP 422 (523)
T ss_dssp ---CEEEECC-SHHHHHHHHHHHHHCC--CEEEESSHHHHHHHHHH---TTC-CE----ETTT---T--------TTC--
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHH---cCCcee----eHHH---h--------hhccc
Confidence 4678999999 6999999999999998 6777778742 2333322 233322 2222 1 222
Q ss_pred CCeeEEEEcccccCc----CcccccCCHHHHHHHHhhhchHH
Q psy616 312 GPIDGVLHIAGISGL----TSNILEANYKNFYSVLSSKISGT 349 (1152)
Q Consensus 312 G~idgvIh~AG~~~~----~~~~~~~~~e~~~~~~~~kv~g~ 349 (1152)
+.+|+||||+|+... ..++.+.+.++|..++++|+.+.
T Consensus 423 ~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~ 464 (523)
T 2o7s_A 423 EDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR 464 (523)
T ss_dssp CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred cCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence 359999999997531 13455556666777777776654
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0029 Score=74.80 Aligned_cols=77 Identities=21% Similarity=0.185 Sum_probs=56.4
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++.++|+| +|++|+++++.|++.|. .|++..|+.. ..+.+.+.-..+..+.+|++|.+++.++++ .+|
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~-~V~v~~R~~~---~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-------~~D 70 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGI-KVTVACRTLE---SAKKLSAGVQHSTPISLDVNDDAALDAEVA-------KHD 70 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTC-EEEEEESSHH---HHHHTTTTCTTEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcC-EEEEEECCHH---HHHHHHHhcCCceEEEeecCCHHHHHHHHc-------CCc
Confidence 56899997 89999999999999886 5777777642 222332222246788999999988776653 699
Q ss_pred EEEEccccc
Q psy616 316 GVLHIAGIS 324 (1152)
Q Consensus 316 gvIh~AG~~ 324 (1152)
+||||++..
T Consensus 71 vVIn~a~~~ 79 (450)
T 1ff9_A 71 LVISLIPYT 79 (450)
T ss_dssp EEEECCC--
T ss_pred EEEECCccc
Confidence 999999864
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0044 Score=70.80 Aligned_cols=83 Identities=11% Similarity=0.111 Sum_probs=56.6
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+++++++||+|++||||+.+++.+...|+ +|+.+.|++... +.+++.|... .+|.++.+..+++.+.. . .
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~---~~~~~~ga~~---~~d~~~~~~~~~~~~~~-~-~ 237 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQ---KIVLQNGAHE---VFNHREVNYIDKIKKYV-G-E 237 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHH---HHHHHTTCSE---EEETTSTTHHHHHHHHH-C-T
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHH---HHHHHcCCCE---EEeCCCchHHHHHHHHc-C-C
Confidence 356789999999999999999999999998 566666664322 2345566542 35776654443333222 1 1
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
+.+|.||+|+|.
T Consensus 238 ~~~D~vi~~~G~ 249 (351)
T 1yb5_A 238 KGIDIIIEMLAN 249 (351)
T ss_dssp TCEEEEEESCHH
T ss_pred CCcEEEEECCCh
Confidence 379999999983
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0033 Score=71.92 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=56.2
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+++++++||+||+||||+.+++.+...|+ +|+.+.|++... +.+++.|... .+|.++.+..+++.+.. . .
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~---~~~~~~g~~~---~~~~~~~~~~~~~~~~~-~-~ 229 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKL---QMAEKLGAAA---GFNYKKEDFSEATLKFT-K-G 229 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHHHHHTCSE---EEETTTSCHHHHHHHHT-T-T
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHH---HHHHHcCCcE---EEecCChHHHHHHHHHh-c-C
Confidence 356789999999999999999999999998 566666664322 2234446542 35666644443333222 1 1
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
+.+|.||+|+|.
T Consensus 230 ~~~d~vi~~~G~ 241 (354)
T 2j8z_A 230 AGVNLILDCIGG 241 (354)
T ss_dssp SCEEEEEESSCG
T ss_pred CCceEEEECCCc
Confidence 369999999984
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0047 Score=70.04 Aligned_cols=82 Identities=16% Similarity=0.104 Sum_probs=56.5
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l-~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.+++++++||+|++||||+.+++.+...|+ +|+.+.|++. ..+.+ ++.|.... .|..+.+..+.+ .+..
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~---~~~~~~~~~g~~~~---~~~~~~~~~~~~-~~~~-- 215 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAE---KCRFLVEELGFDGA---IDYKNEDLAAGL-KREC-- 215 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHH---HHHHHHHTTCCSEE---EETTTSCHHHHH-HHHC--
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHcCCCEE---EECCCHHHHHHH-HHhc--
Confidence 356789999999999999999999998998 6666666542 23344 56676432 466654433333 3322
Q ss_pred cCCeeEEEEcccc
Q psy616 311 IGPIDGVLHIAGI 323 (1152)
Q Consensus 311 ~G~idgvIh~AG~ 323 (1152)
.+.+|.||+|+|.
T Consensus 216 ~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 216 PKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEEEESSCH
T ss_pred CCCceEEEECCCc
Confidence 2479999999984
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.00068 Score=75.34 Aligned_cols=78 Identities=17% Similarity=0.152 Sum_probs=53.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.+++++|||++ |+|+++|+.|++.| +|++..|+. ..+++.+++...+.....+.+|+++. .+.+++
T Consensus 127 ~~k~vlV~GaG-giG~aia~~L~~~G--~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~~ 193 (287)
T 1nvt_A 127 KDKNIVIYGAG-GAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLDG 193 (287)
T ss_dssp CSCEEEEECCS-HHHHHHHHHHTSSS--EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCTT
T ss_pred CCCEEEEECch-HHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhCC
Confidence 47899999986 99999999999999 777777774 33444445543210000123455541 456789
Q ss_pred eeEEEEcccccC
Q psy616 314 IDGVLHIAGISG 325 (1152)
Q Consensus 314 idgvIh~AG~~~ 325 (1152)
+|+||||+|...
T Consensus 194 ~DilVn~ag~~~ 205 (287)
T 1nvt_A 194 VDIIINATPIGM 205 (287)
T ss_dssp CCEEEECSCTTC
T ss_pred CCEEEECCCCCC
Confidence 999999999754
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0072 Score=68.83 Aligned_cols=82 Identities=16% Similarity=0.195 Sum_probs=54.7
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~-Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
+++++++||||++||||+.+++.+... |+ +|+.+.+++...+ .+++.|.... +|.++.+..++ +.++...
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~---~~~~~g~~~~---~~~~~~~~~~~-~~~~~~~- 238 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVE---AAKRAGADYV---INASMQDPLAE-IRRITES- 238 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHH---HHHHHTCSEE---EETTTSCHHHH-HHHHTTT-
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHH---HHHHhCCCEE---ecCCCccHHHH-HHHHhcC-
Confidence 567899999999999999999999998 88 5666666543222 3344465432 36665433332 2222221
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
+.+|.||+|+|.
T Consensus 239 ~~~d~vi~~~g~ 250 (347)
T 1jvb_A 239 KGVDAVIDLNNS 250 (347)
T ss_dssp SCEEEEEESCCC
T ss_pred CCceEEEECCCC
Confidence 589999999985
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.008 Score=71.20 Aligned_cols=78 Identities=22% Similarity=0.236 Sum_probs=57.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++.++|+|+ ||+|+.+++.|++.+...|++..|+... .+++.+. ..+.++.+|++|.+++.+++. .+
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~k---a~~la~~-~~~~~~~~D~~d~~~l~~~l~-------~~ 89 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLAN---AQALAKP-SGSKAISLDVTDDSALDKVLA-------DN 89 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHH---HHHHHGG-GTCEEEECCTTCHHHHHHHHH-------TS
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHH---HHHHHHh-cCCcEEEEecCCHHHHHHHHc-------CC
Confidence 3568999997 9999999999999855578888887422 2233222 124567899999888776653 58
Q ss_pred eEEEEccccc
Q psy616 315 DGVLHIAGIS 324 (1152)
Q Consensus 315 dgvIh~AG~~ 324 (1152)
|.|||+++..
T Consensus 90 DvVIn~tp~~ 99 (467)
T 2axq_A 90 DVVISLIPYT 99 (467)
T ss_dssp SEEEECSCGG
T ss_pred CEEEECCchh
Confidence 9999999864
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.048 Score=59.55 Aligned_cols=151 Identities=13% Similarity=0.113 Sum_probs=96.2
Q ss_pred ccCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEe
Q psy616 25 KVKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYL 103 (1152)
Q Consensus 25 ~~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~l 103 (1152)
...++++||.....+++.+++++|.+.|. |+.+..... .. ......+..+-.++++..++++++.+..+.+|.+||.
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~n 88 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEK-SD-VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNN 88 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC---C-TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCch-hc-cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 34678899988999999999999988776 554443321 11 1122347788889999999999999988899999998
Q ss_pred CCCCCccc-----c--------cChHHHHHHHHHHHhC---CCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHH
Q psy616 104 WPLEDKNC-----I--------YNIMPIIYFLQAVKKS---KLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLH 166 (1152)
Q Consensus 104 w~~~~~~~-----~--------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~ 166 (1152)
-....... . -++.+.+.++|++... ....+++.++....... .....+...-+++.+|+|+++
T Consensus 89 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la 168 (269)
T 3vtz_A 89 AGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVA 168 (269)
T ss_dssp CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHHHHH
Confidence 77532111 1 1345667777774321 11345555544322111 122233444466889999999
Q ss_pred HHcC-CCcEEEE
Q psy616 167 IIMP-ETQISIV 177 (1152)
Q Consensus 167 ~e~p-~~~~~~v 177 (1152)
.|+. ++++..|
T Consensus 169 ~e~~~~i~vn~v 180 (269)
T 3vtz_A 169 IDYAPKIRCNAV 180 (269)
T ss_dssp HHHTTTEEEEEE
T ss_pred HHhcCCCEEEEE
Confidence 9985 4444443
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.012 Score=67.34 Aligned_cols=82 Identities=16% Similarity=0.154 Sum_probs=56.1
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+++++++||+||+||||+.+++.+...|+ +|+.+.+++... +.+++.|.... .|..+.+..+. +.+.. .
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~---~~~~~lGa~~~---~~~~~~~~~~~-~~~~~--~ 233 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKC---EACERLGAKRG---INYRSEDFAAV-IKAET--G 233 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH---HHHHHHTCSEE---EETTTSCHHHH-HHHHH--S
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH---HHHHhcCCCEE---EeCCchHHHHH-HHHHh--C
Confidence 456789999999999999999999999998 566666664332 33344565532 35555433333 33332 3
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
+.+|.+|+|+|.
T Consensus 234 ~g~Dvvid~~g~ 245 (353)
T 4dup_A 234 QGVDIILDMIGA 245 (353)
T ss_dssp SCEEEEEESCCG
T ss_pred CCceEEEECCCH
Confidence 579999999984
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0099 Score=70.25 Aligned_cols=88 Identities=17% Similarity=0.175 Sum_probs=58.4
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEe--cCC---------CHHHH
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQV--DVS---------DKLKM 300 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~--Dvs---------d~~~v 300 (1152)
.+++++++||+|++||||+..++.+...|++++++. +++ +..+.+++.|....+... |+. +.+++
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~-~~~---~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~ 292 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV-SSA---QKEAAVRALGCDLVINRAELGITDDIADDPRRVVETG 292 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE-SSH---HHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe-CCH---HHHHHHHhcCCCEEEecccccccccccccccccchhh
Confidence 467899999999999999999998888888555544 543 233444566765433222 221 12344
Q ss_pred HHHHHHHHhhcC-CeeEEEEcccc
Q psy616 301 ISEINSIINNIG-PIDGVLHIAGI 323 (1152)
Q Consensus 301 ~~~~~~~~~~~G-~idgvIh~AG~ 323 (1152)
..+.+.+.+..| .+|.||+++|.
T Consensus 293 ~~~~~~v~~~~g~g~Dvvid~~G~ 316 (447)
T 4a0s_A 293 RKLAKLVVEKAGREPDIVFEHTGR 316 (447)
T ss_dssp HHHHHHHHHHHSSCCSEEEECSCH
T ss_pred hHHHHHHHHHhCCCceEEEECCCc
Confidence 555566555445 69999999984
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.024 Score=63.38 Aligned_cols=79 Identities=16% Similarity=0.124 Sum_probs=55.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc----hHHHHHHHHhC-CCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL----NSIIYKKLKKF-NNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~----~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
.++++||+|+ ||+|++++..|++.|+.+|.+..|+.. .+++.+++... +.++ ...++.+.+++.+.+.
T Consensus 153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~--~~~~~~~~~~l~~~l~---- 225 (315)
T 3tnl_A 153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKA--QLFDIEDHEQLRKEIA---- 225 (315)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEE--EEEETTCHHHHHHHHH----
T ss_pred cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCce--EEeccchHHHHHhhhc----
Confidence 5789999997 799999999999999988888888732 23344445432 3333 3456667655544332
Q ss_pred hcCCeeEEEEcccc
Q psy616 310 NIGPIDGVLHIAGI 323 (1152)
Q Consensus 310 ~~G~idgvIh~AG~ 323 (1152)
..|+|||+..+
T Consensus 226 ---~aDiIINaTp~ 236 (315)
T 3tnl_A 226 ---ESVIFTNATGV 236 (315)
T ss_dssp ---TCSEEEECSST
T ss_pred ---CCCEEEECccC
Confidence 57999998754
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.097 Score=56.39 Aligned_cols=149 Identities=12% Similarity=0.043 Sum_probs=97.1
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP 105 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~ 105 (1152)
.++++||.....+++.+++++|.++|. |+.+.... . +.....+.++-.++++..++++.+.+..+.+|.|||..+
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~-~---~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag 96 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRE-N---PNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAG 96 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-C---TTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc-c---cccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 467889989999999999999988775 54444431 1 223345778888999999999999999999999999877
Q ss_pred CCCcc------cc--------cChHHHHHHHHHHHhCCC-CceEEEEEccccccc-CCccchhhhHHHHHHHHHHHHHHc
Q psy616 106 LEDKN------CI--------YNIMPIIYFLQAVKKSKL-YLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLHIIM 169 (1152)
Q Consensus 106 ~~~~~------~~--------~~~~~l~~l~qal~~~~~-~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~~e~ 169 (1152)
..... .. -++.+.+.+++++..... ..+++.++....... .....+....+++.+|+|+++.|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~ 176 (251)
T 3orf_A 97 GWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASEN 176 (251)
T ss_dssp CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTT
T ss_pred cCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 52211 11 134566777777654321 234444543322111 122233444466789999999995
Q ss_pred ----CCCcEEEEEe
Q psy616 170 ----PETQISIVFA 179 (1152)
Q Consensus 170 ----p~~~~~~vd~ 179 (1152)
+++++..|..
T Consensus 177 ~~~~~gi~v~~v~P 190 (251)
T 3orf_A 177 GGLPAGSTSLGILP 190 (251)
T ss_dssp SSSCTTCEEEEEEE
T ss_pred cccCCCcEEEEEec
Confidence 3666666543
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.017 Score=65.41 Aligned_cols=83 Identities=17% Similarity=0.257 Sum_probs=54.9
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.+++++++||+||+||||+.+++.+...|+ +|+.+.+++. ..+.+++.|.... .|..+.+..+.+. +... .
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~---~~~~~~~~ga~~~---~~~~~~~~~~~~~-~~~~-~ 215 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDE---KLKIAKEYGAEYL---INASKEDILRQVL-KFTN-G 215 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHH---HHHHHHHTTCSEE---EETTTSCHHHHHH-HHTT-T
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHH---HHHHHHHcCCcEE---EeCCCchHHHHHH-HHhC-C
Confidence 356789999999999999999999988898 5666666542 2234455676533 3555433333322 2211 1
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
..+|.||+|+|.
T Consensus 216 ~g~D~vid~~g~ 227 (334)
T 3qwb_A 216 KGVDASFDSVGK 227 (334)
T ss_dssp SCEEEEEECCGG
T ss_pred CCceEEEECCCh
Confidence 369999999984
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.016 Score=65.87 Aligned_cols=81 Identities=12% Similarity=0.128 Sum_probs=54.8
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++++.++||+|++||||+.+++.+...|+ +|+.+.+++... +.+++.|... .+|.++.+ +.+.+.++.. .+
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~---~~~~~~ga~~---~~d~~~~~-~~~~~~~~~~-~~ 234 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKL---RRAKALGADE---TVNYTHPD-WPKEVRRLTG-GK 234 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHH---HHHHHHTCSE---EEETTSTT-HHHHHHHHTT-TT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHH---HHHHhcCCCE---EEcCCccc-HHHHHHHHhC-CC
Confidence 46788999999999999999999998988 666666664322 2333446543 24776643 3233333221 23
Q ss_pred CeeEEEEccc
Q psy616 313 PIDGVLHIAG 322 (1152)
Q Consensus 313 ~idgvIh~AG 322 (1152)
.+|.||+++|
T Consensus 235 ~~d~vi~~~g 244 (343)
T 2eih_A 235 GADKVVDHTG 244 (343)
T ss_dssp CEEEEEESSC
T ss_pred CceEEEECCC
Confidence 7999999998
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.12 Score=56.03 Aligned_cols=150 Identities=11% Similarity=0.012 Sum_probs=93.2
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP 105 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~ 105 (1152)
.++++||.....+++.+++++|.++|. |+.+... ........-..+..+-.++++..++++++.+..+.+|.+||.-.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg 105 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS-IKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAG 105 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-CCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-hhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence 456788888889999999999988776 4444433 11111111123566778999999999999988889999999876
Q ss_pred CCCccc-----c--------cChHHHHHHHHHH----HhCCCCceEEEEEccccccc-CC--ccchhhhHHHHHHHHHHH
Q psy616 106 LEDKNC-----I--------YNIMPIIYFLQAV----KKSKLYLRKLIISGISINKK-NE--EDLYYCYFNSWVAFERSL 165 (1152)
Q Consensus 106 ~~~~~~-----~--------~~~~~l~~l~qal----~~~~~~~~~~~v~~~~~~~~-~~--~~~~~~~~~~~~g~~r~~ 165 (1152)
...... . -++.+.+.++|++ .+.+ ..+++.++....... .. ...+...-+++.+|.|++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~l 184 (260)
T 3un1_A 106 VFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSL 184 (260)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 532111 1 1345667777765 2333 344555544322111 11 112233346688999999
Q ss_pred HHHcCCCcEEEEE
Q psy616 166 HIIMPETQISIVF 178 (1152)
Q Consensus 166 ~~e~p~~~~~~vd 178 (1152)
+.|+....+++.-
T Consensus 185 a~e~~~~gI~vn~ 197 (260)
T 3un1_A 185 AMEFSRSGVRVNA 197 (260)
T ss_dssp HHHTTTTTEEEEE
T ss_pred HHHhCcCCeEEEE
Confidence 9999654444433
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.021 Score=64.78 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=54.5
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.++||+|++||||+.+++.+...|+ +|+.+.+++...+.. ++.|.... .|..+.+..+.+ .+... .
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~---~~lga~~~---~~~~~~~~~~~~-~~~~~-~ 211 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEEL---LRLGAAYV---IDTSTAPLYETV-MELTN-G 211 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHH---HHHTCSEE---EETTTSCHHHHH-HHHTT-T
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH---HhCCCcEE---EeCCcccHHHHH-HHHhC-C
Confidence 456789999999999999999998888898 566666654433333 33465533 355543333322 22211 1
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
..+|.||+|+|.
T Consensus 212 ~g~Dvvid~~g~ 223 (340)
T 3gms_A 212 IGADAAIDSIGG 223 (340)
T ss_dssp SCEEEEEESSCH
T ss_pred CCCcEEEECCCC
Confidence 379999999985
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=95.82 E-value=0.017 Score=65.03 Aligned_cols=82 Identities=17% Similarity=0.110 Sum_probs=54.6
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++++||+||+||||+.+++.+...|+ +|+.+.+++... +.+++.|.... .|.++.+..+.+.+.. . ..
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~---~~~~~~Ga~~~---~~~~~~~~~~~~~~~~-~-~~ 208 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKA---AHAKALGAWET---IDYSHEDVAKRVLELT-D-GK 208 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHH---HHHHHHTCSEE---EETTTSCHHHHHHHHT-T-TC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH---HHHHHcCCCEE---EeCCCccHHHHHHHHh-C-CC
Confidence 56789999999999999999999988998 566666654322 33445565432 3555543333332221 1 13
Q ss_pred CeeEEEEcccc
Q psy616 313 PIDGVLHIAGI 323 (1152)
Q Consensus 313 ~idgvIh~AG~ 323 (1152)
.+|.||+|+|.
T Consensus 209 g~Dvvid~~g~ 219 (325)
T 3jyn_A 209 KCPVVYDGVGQ 219 (325)
T ss_dssp CEEEEEESSCG
T ss_pred CceEEEECCCh
Confidence 69999999985
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.74 E-value=0.016 Score=63.53 Aligned_cols=74 Identities=11% Similarity=0.062 Sum_probs=50.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++++++|+|+ ||+|+++++.|++.| .+|++..|+.. .+++.+++...+ .+. .+|+ ++ +.+ +.
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G-~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~-------~~~--~~ 180 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLD-CAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DE-------LEG--HE 180 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GG-------GTT--CC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HH-------hcc--CC
Confidence 4789999998 799999999999999 57777888743 234444443322 222 2333 11 112 68
Q ss_pred eeEEEEcccccC
Q psy616 314 IDGVLHIAGISG 325 (1152)
Q Consensus 314 idgvIh~AG~~~ 325 (1152)
+|+||+|+|...
T Consensus 181 ~DivVn~t~~~~ 192 (271)
T 1nyt_A 181 FDLIINATSSGI 192 (271)
T ss_dssp CSEEEECCSCGG
T ss_pred CCEEEECCCCCC
Confidence 999999999754
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.09 Score=57.08 Aligned_cols=153 Identities=6% Similarity=-0.026 Sum_probs=95.4
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc---cccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEE
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK---ISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVF 101 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~---~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv 101 (1152)
..++++||.....+++.+++++|.++|. |+.+....... .....-..+..+-.++++..++++.+.+..+.+|.+|
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 104 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV 104 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 4567788988899999999999987765 55554442110 1111123466788899999999999999999999999
Q ss_pred EeCCCCCccc----c--------cChHHHHHHHHHHHh---CCCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHH
Q psy616 102 YLWPLEDKNC----I--------YNIMPIIYFLQAVKK---SKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSL 165 (1152)
Q Consensus 102 ~lw~~~~~~~----~--------~~~~~l~~l~qal~~---~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~ 165 (1152)
|......... . -++.+.+.++|++.. .....+++.++....... .....+...-+++.+|+|++
T Consensus 105 ~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~l 184 (260)
T 3gem_A 105 HNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSF 184 (260)
T ss_dssp ECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHH
T ss_pred ECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHH
Confidence 9877522111 1 124566777776532 222345555554322211 12223344446688999999
Q ss_pred HHHcC-CCcEEEEE
Q psy616 166 HIIMP-ETQISIVF 178 (1152)
Q Consensus 166 ~~e~p-~~~~~~vd 178 (1152)
+.|+. ++++.+|.
T Consensus 185 a~e~~~~Irvn~v~ 198 (260)
T 3gem_A 185 AARFAPLVKVNGIA 198 (260)
T ss_dssp HHHHTTTCEEEEEE
T ss_pred HHHHCCCCEEEEEe
Confidence 99984 45554443
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.033 Score=63.22 Aligned_cols=82 Identities=13% Similarity=0.146 Sum_probs=53.2
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.++||+|++||||+.+++.+...|+ +|+.+.+++...+..+ +.|.... + |.. +++.+.+.++.. .
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~---~~ga~~v-~--~~~--~~~~~~v~~~~~-~ 225 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVK---SVGADIV-L--PLE--EGWAKAVREATG-G 225 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHH---HHTCSEE-E--ESS--TTHHHHHHHHTT-T
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH---hcCCcEE-e--cCc--hhHHHHHHHHhC-C
Confidence 356789999999999999999999988998 5666666544333333 3465432 2 333 233333333221 1
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
..+|.||+|+|.
T Consensus 226 ~g~Dvvid~~g~ 237 (342)
T 4eye_A 226 AGVDMVVDPIGG 237 (342)
T ss_dssp SCEEEEEESCC-
T ss_pred CCceEEEECCch
Confidence 269999999984
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=95.64 E-value=0.024 Score=67.10 Aligned_cols=88 Identities=22% Similarity=0.199 Sum_probs=60.5
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEe--c--------CCCHHHHH
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQV--D--------VSDKLKMI 301 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~--D--------vsd~~~v~ 301 (1152)
.++++.++||+|++|+||+..++.+...|++++++. +++. ..+.+++.|....+-.. | +++.++++
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~-~~~~---~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~ 300 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVV-SSPQ---KAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWK 300 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE-SSHH---HHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEE-CCHH---HHHHHHhhCCcEEEecCcCcccccccccccchHHHH
Confidence 467899999999999999999988888888655554 4432 33444556765433211 1 24566666
Q ss_pred HHHHHHHhhcC--CeeEEEEcccc
Q psy616 302 SEINSIINNIG--PIDGVLHIAGI 323 (1152)
Q Consensus 302 ~~~~~~~~~~G--~idgvIh~AG~ 323 (1152)
++.+.+.+..+ .+|.||.++|.
T Consensus 301 ~~~~~i~~~t~g~g~Dvvid~~G~ 324 (456)
T 3krt_A 301 RFGKRIRELTGGEDIDIVFEHPGR 324 (456)
T ss_dssp HHHHHHHHHHTSCCEEEEEECSCH
T ss_pred HHHHHHHHHhCCCCCcEEEEcCCc
Confidence 66677665443 79999999884
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=95.60 E-value=0.019 Score=55.77 Aligned_cols=75 Identities=12% Similarity=0.164 Sum_probs=51.9
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
++.++|+|+ |++|..+++.|.+.|.. |+++.|++ +..+.+...+. .++.+|.++.+.+.++ .....|
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~-v~~~d~~~---~~~~~~~~~~~--~~~~~d~~~~~~l~~~------~~~~~d 72 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHE-VLAVDINE---EKVNAYASYAT--HAVIANATEENELLSL------GIRNFE 72 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCC-CEEEESCH---HHHHTTTTTCS--EEEECCTTCHHHHHTT------TGGGCS
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHhCC--EEEEeCCCCHHHHHhc------CCCCCC
Confidence 456899998 99999999999999875 55555543 22233333443 4577899987655432 234789
Q ss_pred EEEEcccc
Q psy616 316 GVLHIAGI 323 (1152)
Q Consensus 316 gvIh~AG~ 323 (1152)
.||++++.
T Consensus 73 ~vi~~~~~ 80 (144)
T 2hmt_A 73 YVIVAIGA 80 (144)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99998864
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=95.59 E-value=0.024 Score=65.06 Aligned_cols=77 Identities=16% Similarity=0.298 Sum_probs=51.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.++++||+|+ ||||+.+++.+...|+ +|+.+.+++..++..+.+++.|.. .+ | .+ ++.+.+.+ . . +.+
T Consensus 180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~--~v--~-~~--~~~~~~~~-~-~-~~~ 247 (366)
T 2cdc_A 180 NCRKVLVVGT-GPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTN--YY--N-SS--NGYDKLKD-S-V-GKF 247 (366)
T ss_dssp TTCEEEEESC-HHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCE--EE--E-CT--TCSHHHHH-H-H-CCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCc--ee--c-hH--HHHHHHHH-h-C-CCC
Confidence 3789999999 9999999999988998 666666664111222334455654 22 5 54 32222333 2 2 689
Q ss_pred eEEEEcccc
Q psy616 315 DGVLHIAGI 323 (1152)
Q Consensus 315 dgvIh~AG~ 323 (1152)
|.||+++|.
T Consensus 248 d~vid~~g~ 256 (366)
T 2cdc_A 248 DVIIDATGA 256 (366)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=95.46 E-value=0.13 Score=55.27 Aligned_cols=154 Identities=10% Similarity=0.057 Sum_probs=96.0
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccccc---------C-CCccEEEcC--CChhhHHHHHHHHHh
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISP---------N-DTVHYKINK--DNINDYTFILNKIYE 92 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~---------~-~~~~~~i~p--~~~~d~~~l~~~l~~ 92 (1152)
..++++||.....+++.+++++|.++|. |+.+... ...... . .-..+..+- .++++..++++.+.+
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRN-EEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 4677889999999999999999988776 4444332 111110 0 122366677 789999999999999
Q ss_pred cCCCcCEEEEeCCCC-Cc-----ccc--------cChHHHHHHHHHHHh---CCCCceEEEEEccccccc-CCccchhhh
Q psy616 93 KDKKIDSVFYLWPLE-DK-----NCI--------YNIMPIIYFLQAVKK---SKLYLRKLIISGISINKK-NEEDLYYCY 154 (1152)
Q Consensus 93 ~~~~~~~iv~lw~~~-~~-----~~~--------~~~~~l~~l~qal~~---~~~~~~~~~v~~~~~~~~-~~~~~~~~~ 154 (1152)
..+.+|.+||.-... .. ... -++.+.+.++|++.. .....+++.++....... .....+...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 168 (252)
T 3f1l_A 89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAAS 168 (252)
T ss_dssp HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHH
Confidence 999999999987652 11 111 124567778887532 222345555544322111 122233444
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEecC
Q psy616 155 FNSWVAFERSLHIIMPETQISIVFAEK 181 (1152)
Q Consensus 155 ~~~~~g~~r~~~~e~p~~~~~~vd~~~ 181 (1152)
.+++.+|.|+++.|+..- +++.-+.+
T Consensus 169 K~a~~~l~~~la~e~~~~-irvn~v~P 194 (252)
T 3f1l_A 169 KFATEGMMQVLADEYQQR-LRVNCINP 194 (252)
T ss_dssp HHHHHHHHHHHHHHTTTT-CEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCC-cEEEEEec
Confidence 466889999999999653 44444443
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.09 Score=57.26 Aligned_cols=150 Identities=11% Similarity=0.057 Sum_probs=94.0
Q ss_pred CceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------cCCC--ccEEEcCCChhhHHHHHHHHHhcCCCc
Q psy616 28 KNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------PNDT--VHYKINKDNINDYTFILNKIYEKDKKI 97 (1152)
Q Consensus 28 ~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~~~~--~~~~i~p~~~~d~~~l~~~l~~~~~~~ 97 (1152)
++++||.....+++.+++++|.+.|. |+.+... ..... .... ..+..+-.++++..++++.+.+..+.+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARR-QARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46788888899999999999988776 4444332 11110 0011 135677889999999999999988899
Q ss_pred CEEEEeCCCCCcccc-------------cChHHHHHHHHHHHhC---CCCceEEEEEccccccc-CCccchhhhHHHHHH
Q psy616 98 DSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKS---KLYLRKLIISGISINKK-NEEDLYYCYFNSWVA 160 (1152)
Q Consensus 98 ~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g 160 (1152)
|.+||.-+....... -++.+.+.++|++... ....+++.++....... .....+...-+++.+
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 162 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRA 162 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHH
Confidence 999998765322111 1245667777764321 11344555544322111 122233444466889
Q ss_pred HHHHHHHHcCCCcEEEEE
Q psy616 161 FERSLHIIMPETQISIVF 178 (1152)
Q Consensus 161 ~~r~~~~e~p~~~~~~vd 178 (1152)
|.|+++.|+|++++..|.
T Consensus 163 l~~~la~e~~gIrvn~v~ 180 (264)
T 3tfo_A 163 ISDGLRQESTNIRVTCVN 180 (264)
T ss_dssp HHHHHHHHCSSEEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEe
Confidence 999999999866665554
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.037 Score=63.59 Aligned_cols=74 Identities=11% Similarity=0.197 Sum_probs=53.5
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+++++|+|+ |+||+.+++.+...|+ +|++..|++.. .+.+++ .|.. +.+|+++.+++.+++. ..
T Consensus 166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga-~V~~~d~~~~~---~~~~~~~~g~~---~~~~~~~~~~l~~~~~-------~~ 230 (369)
T 2eez_A 166 PASVVILGG-GTVGTNAAKIALGMGA-QVTILDVNHKR---LQYLDDVFGGR---VITLTATEANIKKSVQ-------HA 230 (369)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHHHHHTTTS---EEEEECCHHHHHHHHH-------HC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECCHHH---HHHHHHhcCce---EEEecCCHHHHHHHHh-------CC
Confidence 589999999 9999999999999998 67777766422 222322 4554 4567888877766653 58
Q ss_pred eEEEEccccc
Q psy616 315 DGVLHIAGIS 324 (1152)
Q Consensus 315 dgvIh~AG~~ 324 (1152)
|.||+++|..
T Consensus 231 DvVi~~~g~~ 240 (369)
T 2eez_A 231 DLLIGAVLVP 240 (369)
T ss_dssp SEEEECCC--
T ss_pred CEEEECCCCC
Confidence 9999999864
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.044 Score=53.28 Aligned_cols=74 Identities=18% Similarity=0.123 Sum_probs=53.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+.++|+|+ |.+|..+++.|.++|..++++ .+++ +..+.++..+ +.++..|.++++.++++ .....|
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~i-d~~~---~~~~~~~~~~--~~~~~gd~~~~~~l~~~------~~~~~d 72 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAV-DKSK---EKIELLEDEG--FDAVIADPTDESFYRSL------DLEGVS 72 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEE-ESCH---HHHHHHHHTT--CEEEECCTTCHHHHHHS------CCTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEE-ECCH---HHHHHHHHCC--CcEEECCCCCHHHHHhC------CcccCC
Confidence 457899997 789999999999999865555 4442 3344455555 45678999998876543 234689
Q ss_pred EEEEccc
Q psy616 316 GVLHIAG 322 (1152)
Q Consensus 316 gvIh~AG 322 (1152)
.||.+.+
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 9998765
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.14 Score=56.12 Aligned_cols=155 Identities=7% Similarity=0.056 Sum_probs=96.3
Q ss_pred ccCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccccc------CCCccEEEcCCChhhHHHHHHHHHhcCCCc
Q psy616 25 KVKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISP------NDTVHYKINKDNINDYTFILNKIYEKDKKI 97 (1152)
Q Consensus 25 ~~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~------~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~ 97 (1152)
...++++||.....+++.+++++|.+.|. |+.+... ...... ..-..+..+-.++++..++++.+.+..+.+
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN-EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 34677899999999999999999988776 4444332 111100 111236678889999999999999888899
Q ss_pred CEEEEeCCCCCcccc-------------cChHHHHHHHHHHHh---CCCCceEEEEEccccccc-CCccchhhhHHHHHH
Q psy616 98 DSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKK---SKLYLRKLIISGISINKK-NEEDLYYCYFNSWVA 160 (1152)
Q Consensus 98 ~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~---~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g 160 (1152)
|.+||.-........ -++.+.+.++|++.. .....+++.++....... .....+....+++.+
T Consensus 103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 182 (277)
T 4dqx_A 103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISS 182 (277)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHH
Confidence 999998775321111 134567777777532 222345555544322111 122233444466889
Q ss_pred HHHHHHHHcCCCcEEEEEec
Q psy616 161 FERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 161 ~~r~~~~e~p~~~~~~vd~~ 180 (1152)
|+|+++.|+....+++.-+.
T Consensus 183 l~~~la~e~~~~gi~vn~v~ 202 (277)
T 4dqx_A 183 LTRAMAMDHAKEGIRVNAVA 202 (277)
T ss_dssp HHHHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHHHhhhcCeEEEEEe
Confidence 99999999864334443333
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.23 Score=55.03 Aligned_cols=153 Identities=10% Similarity=0.055 Sum_probs=95.0
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCc-----------c-------ccccCCC--ccEEEcCCChhhHH
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDN-----------I-------KISPNDT--VHYKINKDNINDYT 84 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~-----------~-------~~~~~~~--~~~~i~p~~~~d~~ 84 (1152)
..++++||.....+++.+++++|.+.|. |+.+..... . ....... ..+..+-.++++..
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 3667899999999999999999988776 444432210 0 0001111 13667888999999
Q ss_pred HHHHHHHhcCCCcCEEEEeCCCCCccc------c--------cChHHHHHHHHHHH----hCCCCceEEEEEccccccc-
Q psy616 85 FILNKIYEKDKKIDSVFYLWPLEDKNC------I--------YNIMPIIYFLQAVK----KSKLYLRKLIISGISINKK- 145 (1152)
Q Consensus 85 ~l~~~l~~~~~~~~~iv~lw~~~~~~~------~--------~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~~- 145 (1152)
++++++.+..+.+|.+||.-....... . -++.+.+.++|++. +.+...+++.++.......
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 185 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA 185 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 999999988889999999876522111 1 12456677777743 2232345555544322111
Q ss_pred CCccchhhhHHHHHHHHHHHHHHcCC--CcEEEEE
Q psy616 146 NEEDLYYCYFNSWVAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 146 ~~~~~~~~~~~~~~g~~r~~~~e~p~--~~~~~vd 178 (1152)
.....+...-+++.+|.|+++.|+.. +++.+|.
T Consensus 186 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~ 220 (299)
T 3t7c_A 186 ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVC 220 (299)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEe
Confidence 12223344446688999999999964 4554443
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=95.39 E-value=0.03 Score=64.09 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=54.2
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+++++++||+||+||||+.+++.+...|+ +|+.+.+++. ..+.+++.|.... .|..+. ++.+.+.+.. -+
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~---~~~~~~~~Ga~~~---~~~~~~-~~~~~~~~~~--~~ 230 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDE---KSAFLKSLGCDRP---INYKTE-PVGTVLKQEY--PE 230 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHH---HHHHHHHTTCSEE---EETTTS-CHHHHHHHHC--TT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHH---HHHHHHHcCCcEE---EecCCh-hHHHHHHHhc--CC
Confidence 56789999999999999999999988888 5666666532 2334455676532 344432 2333333332 14
Q ss_pred CeeEEEEccc
Q psy616 313 PIDGVLHIAG 322 (1152)
Q Consensus 313 ~idgvIh~AG 322 (1152)
.+|.||+|+|
T Consensus 231 g~D~vid~~g 240 (362)
T 2c0c_A 231 GVDVVYESVG 240 (362)
T ss_dssp CEEEEEECSC
T ss_pred CCCEEEECCC
Confidence 7999999987
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.14 Score=56.11 Aligned_cols=153 Identities=8% Similarity=0.025 Sum_probs=94.4
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------cCC--CccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------PND--TVHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~~~--~~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
.++++||.....+++.+++++|.+.|. |+.+... ..... ... -..+..+-.++++..++++.+.+..+.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD-AKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 567899999999999999999988776 4444332 11110 111 123566788999999999999988889
Q ss_pred cCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHhC-----CCCceEEEEEccccccc-CCccchhhhHHH
Q psy616 97 IDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKS-----KLYLRKLIISGISINKK-NEEDLYYCYFNS 157 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~-----~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~ 157 (1152)
+|.+||.-........ -++.+.+.++|++... ....+++.++....... .....+...-++
T Consensus 102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa 181 (279)
T 3sju_A 102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHG 181 (279)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHH
Confidence 9999998775321111 1346677888876441 11245555544322211 112233444466
Q ss_pred HHHHHHHHHHHcCCCcEEEEEec
Q psy616 158 WVAFERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 158 ~~g~~r~~~~e~p~~~~~~vd~~ 180 (1152)
+.+|+|+++.|+....+++.-+.
T Consensus 182 ~~~l~~~la~e~~~~gi~vn~v~ 204 (279)
T 3sju_A 182 VVGFTKSVGFELAKTGITVNAVC 204 (279)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEE
T ss_pred HHHHHHHHHHHHHhhCcEEEEEe
Confidence 88999999999865444443333
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.27 E-value=0.26 Score=52.86 Aligned_cols=149 Identities=6% Similarity=0.022 Sum_probs=93.6
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP 105 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~ 105 (1152)
.++++||.....+++.+++++|.++|. |+.+..... .....-..+..+-.++++..++++++.+..+.+|.+||...
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag 83 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT--QEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAG 83 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCC--SSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchh--hhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 356789999999999999999988775 544443321 11111223567888999999999999998889999999876
Q ss_pred CCCccc-----c--------cChHHHHHHHHHHH----hCCCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHHH
Q psy616 106 LEDKNC-----I--------YNIMPIIYFLQAVK----KSKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLHI 167 (1152)
Q Consensus 106 ~~~~~~-----~--------~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~~ 167 (1152)
...... . -++.+.+.++|++. +.+ ..+++.+++...... .....+...-.++.+|.|+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~ 162 (250)
T 2fwm_X 84 ILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL 162 (250)
T ss_dssp CCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 522111 1 12355667777652 222 344555544322111 1112233334567889999999
Q ss_pred HcC--CCcEEEEE
Q psy616 168 IMP--ETQISIVF 178 (1152)
Q Consensus 168 e~p--~~~~~~vd 178 (1152)
|+. ++++.+|.
T Consensus 163 e~~~~gi~v~~v~ 175 (250)
T 2fwm_X 163 ELAGSGVRCNVVS 175 (250)
T ss_dssp HHGGGTCEEEEEE
T ss_pred HhCccCCEEEEEE
Confidence 985 56665554
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.14 Score=56.53 Aligned_cols=152 Identities=13% Similarity=0.110 Sum_probs=96.0
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------cC---CCccEEEcCCChhhHHHHHHHHHhcC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------PN---DTVHYKINKDNINDYTFILNKIYEKD 94 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~~---~~~~~~i~p~~~~d~~~l~~~l~~~~ 94 (1152)
..++++||.....+++.+++++|.+.|. |+.+.... .... .. .-..+..+-.++++..++++.+.+..
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSP-RELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG-GGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 3567788888889999999999988775 54444331 1111 00 11136678889999999999999988
Q ss_pred CCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHH----hCCCCceEEEEEccccc-c-cCCccchhhhH
Q psy616 95 KKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVK----KSKLYLRKLIISGISIN-K-KNEEDLYYCYF 155 (1152)
Q Consensus 95 ~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~-~-~~~~~~~~~~~ 155 (1152)
+.+|.+||.-........ -++.+.++++|++. +.+ ..+++.++..... . ......+....
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~~~~~~Y~asK 196 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGYPGWSHYGASK 196 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBCTTCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCCCCCHHHHHHH
Confidence 899999998765322111 13456777777753 222 3455555543221 1 11122333344
Q ss_pred HHHHHHHHHHHHHcC--CCcEEEEEe
Q psy616 156 NSWVAFERSLHIIMP--ETQISIVFA 179 (1152)
Q Consensus 156 ~~~~g~~r~~~~e~p--~~~~~~vd~ 179 (1152)
+++.+|.|+++.|+. ++++..|..
T Consensus 197 aa~~~l~~~la~e~~~~gI~vn~v~P 222 (293)
T 3rih_A 197 AAQLGFMRTAAIELAPRGVTVNAILP 222 (293)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEec
Confidence 668899999999985 466655543
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=95.16 E-value=0.051 Score=61.53 Aligned_cols=79 Identities=16% Similarity=0.116 Sum_probs=54.4
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++++.++||+|+ ||+|+.+++.+...|+ +|+.+.+++.. .+.+++.|... .+|.++.+ +.+.+.++. +
T Consensus 162 ~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~---~~~~~~lGa~~---~~d~~~~~-~~~~~~~~~---~ 229 (339)
T 1rjw_A 162 AKPGEWVAIYGI-GGLGHVAVQYAKAMGL-NVVAVDIGDEK---LELAKELGADL---VVNPLKED-AAKFMKEKV---G 229 (339)
T ss_dssp CCTTCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHH---HHHHHHTTCSE---EECTTTSC-HHHHHHHHH---S
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCHHH---HHHHHHCCCCE---EecCCCcc-HHHHHHHHh---C
Confidence 457889999999 8899999998888888 67777776432 23344567652 24766532 333333332 5
Q ss_pred CeeEEEEcccc
Q psy616 313 PIDGVLHIAGI 323 (1152)
Q Consensus 313 ~idgvIh~AG~ 323 (1152)
.+|.||+++|.
T Consensus 230 ~~d~vid~~g~ 240 (339)
T 1rjw_A 230 GVHAAVVTAVS 240 (339)
T ss_dssp SEEEEEESSCC
T ss_pred CCCEEEECCCC
Confidence 79999999974
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.094 Score=57.29 Aligned_cols=171 Identities=11% Similarity=0.051 Sum_probs=94.8
Q ss_pred cceeeccccCCCCCCCccccCCceEEEEecCchhHHHHHHHHccCCcEEEEecCCccccc-------cCCC--ccEEEcC
Q psy616 7 TTKIKVWVKSPLISLPISKVKKNNLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIKIS-------PNDT--VHYKINK 77 (1152)
Q Consensus 7 ~~~~~~W~~~~~~~~~~~~~~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~~~~~~~~~-------~~~~--~~~~i~p 77 (1152)
-++.++|++...... .....++++||.....+++.+++++|.+.|.-+++...+..... .... ..+..+-
T Consensus 6 ~~~~~~~~~~m~~~~-~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv 84 (271)
T 4ibo_A 6 HSSGLVPRGSMSNQI-IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV 84 (271)
T ss_dssp ------------CCG-GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT
T ss_pred CCCCCCCcccCcccc-ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC
Confidence 356777776543221 12346678888888999999999999888764444332211111 0111 1245567
Q ss_pred CChhhHHHHHHHHHhcCCCcCEEEEeCCCCCccc-----c--------cChHHHHHHHHHHHhC---CCCceEEEEEccc
Q psy616 78 DNINDYTFILNKIYEKDKKIDSVFYLWPLEDKNC-----I--------YNIMPIIYFLQAVKKS---KLYLRKLIISGIS 141 (1152)
Q Consensus 78 ~~~~d~~~l~~~l~~~~~~~~~iv~lw~~~~~~~-----~--------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~ 141 (1152)
.++++..++++++.+..+.+|.+||.-....... . -++.+.+.++|++... ....+++.++...
T Consensus 85 ~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~ 164 (271)
T 4ibo_A 85 TSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLT 164 (271)
T ss_dssp TCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHH
Confidence 7899999999999999999999999877532111 1 1245667777764332 1134555554432
Q ss_pred cccc-CCccchhhhHHHHHHHHHHHHHHcCCCcEEEEE
Q psy616 142 INKK-NEEDLYYCYFNSWVAFERSLHIIMPETQISIVF 178 (1152)
Q Consensus 142 ~~~~-~~~~~~~~~~~~~~g~~r~~~~e~p~~~~~~vd 178 (1152)
.... .....+....+++.+|.|+++.|+....+++.-
T Consensus 165 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~ 202 (271)
T 4ibo_A 165 SELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANA 202 (271)
T ss_dssp GTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred hCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEE
Confidence 2111 112223334466789999999998653344433
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.27 Score=53.96 Aligned_cols=153 Identities=8% Similarity=-0.008 Sum_probs=96.6
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcc--c-----------cccCCC--ccEEEcCCChhhHHHHHHH
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNI--K-----------ISPNDT--VHYKINKDNINDYTFILNK 89 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~--~-----------~~~~~~--~~~~i~p~~~~d~~~l~~~ 89 (1152)
..++++||.....+++.+++++|.++|. |+.+...... . ...... ..+..+-.++++..+++++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 4567899999999999999999988776 4444433210 0 000011 1356678899999999999
Q ss_pred HHhcCCCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHhCC---CCceEEEEEccccccc--CCccch
Q psy616 90 IYEKDKKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKSK---LYLRKLIISGISINKK--NEEDLY 151 (1152)
Q Consensus 90 l~~~~~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~~---~~~~~~~v~~~~~~~~--~~~~~~ 151 (1152)
+.+..+.+|.+||.-........ -++.+.+.++|++...- ...+++.++....... .....+
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y 166 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPY 166 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchH
Confidence 99988899999998765321111 13467788888865432 1334555543221111 112233
Q ss_pred hhhHHHHHHHHHHHHHHcCC--CcEEEEE
Q psy616 152 YCYFNSWVAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 152 ~~~~~~~~g~~r~~~~e~p~--~~~~~vd 178 (1152)
....+++.+|+|+++.|+.. +++..|.
T Consensus 167 ~asKaal~~~~~~la~e~~~~gI~vn~v~ 195 (285)
T 3sc4_A 167 MMAKYGMTLCALGIAEELRDAGIASNTLW 195 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEe
Confidence 34446688999999999864 5555554
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=95.12 E-value=0.21 Score=53.77 Aligned_cols=150 Identities=11% Similarity=0.132 Sum_probs=94.7
Q ss_pred ceEEEEecCchhHHHHHHHHccCCc-EEEEecCCc--cccccCCC--ccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEe
Q psy616 29 NNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDN--IKISPNDT--VHYKINKDNINDYTFILNKIYEKDKKIDSVFYL 103 (1152)
Q Consensus 29 ~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~--~~~~~~~~--~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~l 103 (1152)
+++||.....|++.+++++|.+.|. |+.+...+. ....+... ..+..+-.++++.++++++..++.+.+|.+|+.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN 82 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5789999999999999999988876 544443311 11111111 236677789999999999999999999999997
Q ss_pred CCCCCccccc-------------ChHHHHHHHHHHHhC--CCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHHH
Q psy616 104 WPLEDKNCIY-------------NIMPIIYFLQAVKKS--KLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLHI 167 (1152)
Q Consensus 104 w~~~~~~~~~-------------~~~~l~~l~qal~~~--~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~~ 167 (1152)
-......... ++.+.+++.|++... ....+++.++....... .....+...-+++.+|.|+++.
T Consensus 83 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ 162 (247)
T 3ged_A 83 ACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAM 162 (247)
T ss_dssp CCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6553221111 235667777764321 11245555544322111 1222344445678999999999
Q ss_pred Hc-CCCcEEEEE
Q psy616 168 IM-PETQISIVF 178 (1152)
Q Consensus 168 e~-p~~~~~~vd 178 (1152)
|+ |++++..|.
T Consensus 163 ela~~IrVN~I~ 174 (247)
T 3ged_A 163 SLGPDVLVNCIA 174 (247)
T ss_dssp HHTTTSEEEEEE
T ss_pred HHCCCCEEEEEe
Confidence 99 566665553
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=95.10 E-value=0.29 Score=53.03 Aligned_cols=154 Identities=5% Similarity=-0.074 Sum_probs=96.4
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc---------cCC--CccEEEcCCChhhHHHHHHHHHhc
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS---------PND--TVHYKINKDNINDYTFILNKIYEK 93 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~---------~~~--~~~~~i~p~~~~d~~~l~~~l~~~ 93 (1152)
..++.+||.....+++.+++++|.+.|. |+.+... ..... ... -..+..+-.++++..++++.+.+.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD-GERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3567889999999999999999988776 4444332 11110 011 123556788999999999999998
Q ss_pred CCCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHh---CCCCceEEEEEccccccc-CCccchhhhHH
Q psy616 94 DKKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKK---SKLYLRKLIISGISINKK-NEEDLYYCYFN 156 (1152)
Q Consensus 94 ~~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~---~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~ 156 (1152)
.+.+|.+||.-........ -++.+.+.++|++.. .....+++.++....... .....+....+
T Consensus 85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 164 (265)
T 3lf2_A 85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARA 164 (265)
T ss_dssp HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHH
Confidence 8899999998765322111 134667778887543 222345555554322221 12223334446
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEec
Q psy616 157 SWVAFERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 157 ~~~g~~r~~~~e~p~~~~~~vd~~ 180 (1152)
++.+|.|+++.|+....+++.-+.
T Consensus 165 a~~~l~~~la~e~~~~gi~vn~v~ 188 (265)
T 3lf2_A 165 GVKNLVRSMAFEFAPKGVRVNGIL 188 (265)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHHHHHHHhcccCeEEEEEE
Confidence 688999999999975444443333
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=95.07 E-value=0.00026 Score=83.19 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=30.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK 271 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~ 271 (1152)
.+++++|||++ +||+.+|+.|+..|+ +|+++.+++
T Consensus 264 ~GKtVvVtGaG-gIG~aiA~~Laa~GA-~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYG-DVGKGCAAALKQAGA-RVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred cCCEEEEECCC-HHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 68999999976 999999999999999 566666664
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.11 Score=56.55 Aligned_cols=153 Identities=9% Similarity=0.088 Sum_probs=93.4
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccc-------cc-C-CCccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKI-------SP-N-DTVHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~-------~~-~-~~~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
.++.+||.....+++.+++++|.+.|. |+.+........ .. . .-..+..+-.++++..++++.+.+..+.
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGK 103 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 456778888889999999999988776 444432221111 00 1 1123667888999999999999988888
Q ss_pred cCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHhC---CCCceEEEEEccccccc-CCccchhhhHHHHH
Q psy616 97 IDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKS---KLYLRKLIISGISINKK-NEEDLYYCYFNSWV 159 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~ 159 (1152)
+|.+||.......... -++.+.+.+++++... ....+++.++....... .....+....+++.
T Consensus 104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 183 (269)
T 3gk3_A 104 VDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIH 183 (269)
T ss_dssp CSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHH
Confidence 9999998775322111 1235566677764321 11345555544322111 12223444446688
Q ss_pred HHHHHHHHHcCCCcEEEEEe
Q psy616 160 AFERSLHIIMPETQISIVFA 179 (1152)
Q Consensus 160 g~~r~~~~e~p~~~~~~vd~ 179 (1152)
+|.++++.|+....+++.-+
T Consensus 184 ~~~~~la~e~~~~gi~v~~v 203 (269)
T 3gk3_A 184 GFTKTLALETAKRGITVNTV 203 (269)
T ss_dssp HHHHHHHHHHGGGTEEEEEE
T ss_pred HHHHHHHHHhhhcCCEEEEE
Confidence 99999999986433444333
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.13 Score=55.19 Aligned_cols=154 Identities=9% Similarity=0.066 Sum_probs=94.5
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCcEEEEecCCcccccc------CCCccEEEcCCChhhHHHHHHHHHhcCCCcCEE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIKISP------NDTVHYKINKDNINDYTFILNKIYEKDKKIDSV 100 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~~~~~~~~~~------~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~i 100 (1152)
.++++||.....+++.+++++|.+.|.-+++.......... ..-..+..+-.++++..++++++.+..+.+|.+
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 84 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL 84 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 56788998999999999999998877633333222111110 011135567779999999999999988899999
Q ss_pred EEeCCCCCccc-----c--------cChHHHHHHHHH----HHhCCCCceEEEEEccccccc-CCccchhhhHHHHHHHH
Q psy616 101 FYLWPLEDKNC-----I--------YNIMPIIYFLQA----VKKSKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFE 162 (1152)
Q Consensus 101 v~lw~~~~~~~-----~--------~~~~~l~~l~qa----l~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~ 162 (1152)
||......... . -++.+.+.++|+ +.+.+...+++.++....... .....+....+++.+|.
T Consensus 85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~ 164 (247)
T 3rwb_A 85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFT 164 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHHH
Confidence 99877532111 1 134566777777 333332345555544322111 12223444446688999
Q ss_pred HHHHHHcCCCcEEEEEec
Q psy616 163 RSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 163 r~~~~e~p~~~~~~vd~~ 180 (1152)
|+++.|+....+++.-+.
T Consensus 165 ~~la~e~~~~gi~vn~v~ 182 (247)
T 3rwb_A 165 RALATELGKYNITANAVT 182 (247)
T ss_dssp HHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHhhhcCeEEEEEe
Confidence 999999864344443333
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.02 E-value=0.19 Score=54.79 Aligned_cols=150 Identities=8% Similarity=0.057 Sum_probs=95.4
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc------cCCCccEEEcCCChhhHHHHHHHHHhcCCCcC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS------PNDTVHYKINKDNINDYTFILNKIYEKDKKID 98 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~------~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~ 98 (1152)
..++++||.....+++.+++++|.++|. |+.+.... .... ...-..+..+-.++++..++++.+.+..+.+|
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPE-TDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT-SCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3567889989999999999999988776 44444331 1110 01122466788899999999999999888999
Q ss_pred EEEEeCCCCCc--c-----cc--------cChHHHHHHHHHH----HhCCCCceEEEEEccccccc-CCccchhhhHHHH
Q psy616 99 SVFYLWPLEDK--N-----CI--------YNIMPIIYFLQAV----KKSKLYLRKLIISGISINKK-NEEDLYYCYFNSW 158 (1152)
Q Consensus 99 ~iv~lw~~~~~--~-----~~--------~~~~~l~~l~qal----~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~ 158 (1152)
.+||.-..... . .. -++.+.+.++|++ .+.+ ..+++.++....... .....+....+++
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 166 (271)
T 3tzq_B 88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYDMSTAYACTKAAI 166 (271)
T ss_dssp EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCSSCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCCCChHHHHHHHHH
Confidence 99998765311 0 11 1345677777775 3333 345555544322211 1222334444668
Q ss_pred HHHHHHHHHHcCC--CcEEEE
Q psy616 159 VAFERSLHIIMPE--TQISIV 177 (1152)
Q Consensus 159 ~g~~r~~~~e~p~--~~~~~v 177 (1152)
.+|+|+++.|+.. +++..|
T Consensus 167 ~~l~~~la~e~~~~gi~vn~v 187 (271)
T 3tzq_B 167 ETLTRYVATQYGRHGVRCNAI 187 (271)
T ss_dssp HHHHHHHHHHHGGGTEEEEEE
T ss_pred HHHHHHHHHHHhhcCEEEEEE
Confidence 8999999999864 444444
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=95.01 E-value=0.15 Score=55.42 Aligned_cols=152 Identities=8% Similarity=-0.027 Sum_probs=93.5
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCcEEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP 105 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~ 105 (1152)
..++++||.....+++.+++++|.++|.-+++......... .......+-.+.++...+++++.+..+.+|.+||.-.
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg 103 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--ADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAG 103 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--CSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--hhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 35677888888999999999999887764444333222211 1122345666888888999999888888999999877
Q ss_pred CCCccc-----c--------cChHHHHHHHHHHH----hCCCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHHH
Q psy616 106 LEDKNC-----I--------YNIMPIIYFLQAVK----KSKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLHI 167 (1152)
Q Consensus 106 ~~~~~~-----~--------~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~~ 167 (1152)
...... . -++.+.+.++|++. +.+ ..+++.++....... .....+....+++.+|+|+++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~ 182 (266)
T 3uxy_A 104 VISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGM 182 (266)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 532111 1 13456777777752 222 345555544322111 1122234444668899999999
Q ss_pred HcCCCcEEEEEec
Q psy616 168 IMPETQISIVFAE 180 (1152)
Q Consensus 168 e~p~~~~~~vd~~ 180 (1152)
|+....+++.-+.
T Consensus 183 e~~~~gI~vn~v~ 195 (266)
T 3uxy_A 183 DHAPQGIRINAVC 195 (266)
T ss_dssp HHGGGTEEEEEEE
T ss_pred HhhhcCcEEEEEe
Confidence 9864334443333
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1152 | ||||
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 3e-65 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 1e-57 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 4e-51 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 2e-49 | |
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 3e-47 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 1e-43 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 4e-42 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 5e-37 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 2e-35 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 3e-35 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 4e-33 | |
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 8e-32 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 5e-31 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 1e-29 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 2e-28 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 9e-26 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 8e-12 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 6e-10 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 3e-08 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 4e-08 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 7e-08 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 2e-07 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 3e-07 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 3e-07 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 4e-07 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 8e-07 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 1e-06 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-06 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 3e-06 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 3e-06 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 3e-06 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 5e-06 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 7e-06 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 8e-06 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 9e-06 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 9e-06 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 9e-06 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 1e-05 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 1e-05 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 2e-05 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 2e-05 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 2e-05 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 2e-05 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 4e-05 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 5e-05 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 5e-05 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 6e-05 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 1e-04 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 1e-04 | |
| d2af8a_ | 86 | a.28.1.1 (A:) Actinorhodin polyketide synthase acy | 2e-04 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 3e-04 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 3e-04 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 5e-04 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 5e-04 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 0.001 | |
| d1or5a_ | 82 | a.28.1.1 (A:) Frenolicin polyketide synthase acyl | 0.001 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 0.002 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 0.002 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 0.002 | |
| d1f80d_ | 74 | a.28.1.1 (D:) Acyl carrier protein {Bacillus subti | 0.002 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 0.002 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 0.003 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 0.003 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 0.003 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 0.003 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 0.004 |
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 218 bits (557), Expect = 3e-65
Identities = 53/263 (20%), Positives = 86/263 (32%), Gaps = 36/263 (13%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
+ + G+ P F K + K + I FD
Sbjct: 4 VVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITR--FDASALP---------------- 45
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
+ + E R+D ++ L + LALEDAG P + +++G VG
Sbjct: 46 VRIAAEVDVDPGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTG 105
Query: 753 EGSNYQ-------------DRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSL 799
G +R+ + + SA +A GP + TAC++
Sbjct: 106 IGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGA 165
Query: 800 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERAN 854
A A + ++ E D ++ G I+P A A LS P+ F +
Sbjct: 166 DALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRD 225
Query: 855 GLVPSEAVVAVVLKRLSRALSDG 877
G V E +VL+ A G
Sbjct: 226 GFVMGEGAGVLVLEAYEHAKKRG 248
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 197 bits (501), Expect = 1e-57
Identities = 50/263 (19%), Positives = 95/263 (36%), Gaps = 35/263 (13%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
+ + G+ P + WK L+ + IS I FD Y +K+ G
Sbjct: 4 VVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDH--FDTSAYA-----------TKFAG 50
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
+ + D + + E +MD ++ + A++D+G + +IG +G
Sbjct: 51 LVKDFNCEDIISRK----EQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSG 106
Query: 753 EGSNYQDRLDQVNL-------------TSTHNAILSARLAYFMDLKGPVMAINTACSSSL 799
G + +L ST +++ L L+GP ++I TA +S +
Sbjct: 107 IGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGV 166
Query: 800 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERAN 854
A + + + D ++ G +P +A LS P +D+ +
Sbjct: 167 HNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERD 226
Query: 855 GLVPSEAVVAVVLKRLSRALSDG 877
G V + +VL+ A G
Sbjct: 227 GFVLGDGAGMLVLEEYEHAKKRG 249
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 178 bits (452), Expect = 4e-51
Identities = 56/263 (21%), Positives = 91/263 (34%), Gaps = 35/263 (13%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
+ + G+ P + ++W+ L+ ++ I I FD S
Sbjct: 4 VVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITR--FDA---------------SDQAC 46
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
G + + EA+RMD + S A+ DA N++ +IG+ +G
Sbjct: 47 RFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTG 106
Query: 753 EGSNYQDRLDQVNLTS-------------THNAILSARLAYFMDLKGPVMAINTACSSSL 799
G Q L + S A + KGP TAC++
Sbjct: 107 IGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGS 166
Query: 800 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS-----PDGKCYVFDERAN 854
A A + ++ I G I+P +Y SA LS P FD+ +
Sbjct: 167 NAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRD 226
Query: 855 GLVPSEAVVAVVLKRLSRALSDG 877
G V E ++L+ L AL+ G
Sbjct: 227 GFVMGEGSGILILEELESALARG 249
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 173 bits (440), Expect = 2e-49
Identities = 56/262 (21%), Positives = 83/262 (31%), Gaps = 34/262 (12%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
+ + G P EFW L K I I + FD S +
Sbjct: 11 VVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITK--FDH---------------SDFDV 53
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
+ P + R D + L + A+ A + + G+ V
Sbjct: 54 HNAAEIQDFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASG 113
Query: 753 EGSNYQ-------------DRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSL 799
G + R+ + L + S +A G +INTACSSS
Sbjct: 114 IGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSN 173
Query: 800 VATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS----PDGKCYVFDERANG 855
A A +S++ D + G I+P A + LS P FD+ NG
Sbjct: 174 DAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNG 233
Query: 856 LVPSEAVVAVVLKRLSRALSDG 877
V E +VL+ L A G
Sbjct: 234 FVMGEGSGMLVLESLEHAEKRG 255
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 168 bits (425), Expect = 3e-47
Identities = 44/268 (16%), Positives = 85/268 (31%), Gaps = 20/268 (7%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
+ + G+ P R + W+ LI+ + I + K + E + S
Sbjct: 3 VVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVA 62
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGV- 751
+ F E L ++ + + + + AL DA + P + ++
Sbjct: 63 AFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGG 122
Query: 752 -------------EEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSS 798
RL + + S ++ +GP A TAC++
Sbjct: 123 GIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATG 182
Query: 799 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVFDER 852
+ A + ++ + D ++ G I + + + LS P FD
Sbjct: 183 AHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCD 242
Query: 853 ANGLVPSEAVVAVVLKRLSRALSDGDPI 880
+G V E +VL+ A G I
Sbjct: 243 RDGFVIGEGSGVIVLEEYEHAKRRGAKI 270
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 155 bits (392), Expect = 1e-43
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 12/209 (5%)
Query: 842 PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAP 901
P+ FD +G V +E VL+ AL+ G IHA I G +
Sbjct: 3 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKA 62
Query: 902 NGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAI 961
+G E I+ +S + DI+YI HG+GT+ D E A +
Sbjct: 63 DGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARR---TPV 119
Query: 962 TSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKW 1021
+S KS +GH+ A G + + V ++++ ++P + + + L P
Sbjct: 120 SSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVP---------L 170
Query: 1022 NTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050
KLR G G + +VL++
Sbjct: 171 EARERKLRSVLTVGSGFGGFQSAMVLRDA 199
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 152 bits (385), Expect = 4e-42
Identities = 40/255 (15%), Positives = 77/255 (30%), Gaps = 12/255 (4%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
I G+ N E L + I+ E + G
Sbjct: 4 AVITGLGIVSSIGNNQQEVLASLREGRSGITFSQE--LKDSGM---RSHVWGNVKLDTTG 58
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
I I + L E++ G G +
Sbjct: 59 LIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 753 EGSNYQD--RLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLR 810
+ + +T + +SA LA + G +I++AC++S A + ++
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 811 QHECDTAISAGVNLMISP-----EAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAV 865
+ D + G + +A A+++ +P+ +D +G V + V
Sbjct: 179 LGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMV 238
Query: 866 VLKRLSRALSDGDPI 880
V++ L AL+ G I
Sbjct: 239 VVEELEHALARGAHI 253
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 134 bits (339), Expect = 5e-37
Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 11/170 (6%)
Query: 880 IHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 939
I+A + G G++ D NG + + + + + I Y+ HGT T GD
Sbjct: 2 IYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDK 61
Query: 940 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 999
E A+ +F ++S KS GH A+G V I + +++ + +P +++ +
Sbjct: 62 AEAQAVKTIFG---EAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLD 118
Query: 1000 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049
+ L P + ++FG GTN ++ ++
Sbjct: 119 NPDEGCDLDFVPH--------EARQVSGMEYTLCNSFGFGGTNGSLIFKK 160
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 129 bits (326), Expect = 2e-35
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 880 IHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 939
I+A + G G + D P G + K + + PE + YI HGT T +GD
Sbjct: 2 IYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDR 61
Query: 940 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 999
E+ A+ VF + ++S KS IGH A+G V I VQ++ + +IP +++ E
Sbjct: 62 AEVLAIKRVFGDHAKR---LMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLE 118
Query: 1000 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 1047
+ + L P K+ ++F G NA +
Sbjct: 119 DPDPELDLDFVP----------EPREAKVDYALSNSFAFGGHNAVLAF 156
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 129 bits (325), Expect = 3e-35
Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 12/171 (7%)
Query: 880 IHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 939
I+ + G + D P+G T I K S L PE ++YI HGT T D
Sbjct: 2 IYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDV 61
Query: 940 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 999
E A+ N YN A++S KS GH SG + + V +I +P +++ E
Sbjct: 62 TETRAIKQALGNHAYN---IAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLE 118
Query: 1000 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050
+ L P + + + ++FG G N + ++Y
Sbjct: 119 NPDPECDLDYVP---------GQSRALIVDVALSNSFGFGGHNVTLAFKKY 160
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 125 bits (314), Expect = 4e-33
Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 38/230 (16%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
+ I G+ R P +FW++L + + I FD S +
Sbjct: 3 VVITGVGVRAPGGNGTRQFWELLTSGRTATRRISF--FDP---------------SPYRS 45
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
+ +FDP+ P E +RMD + + + A +G P+ + ++G+ +G
Sbjct: 46 QVAAEADFDPVAEGFGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSA 105
Query: 753 EGSNYQDRLDQVNLTS--------------------THNAILSARLAYFMDLKGPVMAIN 792
+ + L S +++ A +A+ + +GPV ++
Sbjct: 106 -VAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVS 164
Query: 793 TACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP 842
T C+S L + A +++ + D + + I+P + +
Sbjct: 165 TGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTA 214
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 119 bits (300), Expect = 8e-32
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 882 AIIRGSGINYDGKTNGITAPNGISQTELI--KSVYKKSNLNPEDINYIITHGTGTKLGDP 939
A + G G++ D + IT P + ++ ++S L P I+Y+ H T T +GD
Sbjct: 2 AELCGYGMSGDA--HHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDA 59
Query: 940 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 999
VE A+ VF + A +S K GH A+G V I + +I + + P +L+ +
Sbjct: 60 VEARAIKTVFSEHATSG-TLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVK 118
Query: 1000 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVL 1047
+ + P +K +R ++FG GTNA ++
Sbjct: 119 NPDPIFDKRFMPLTTSK--------KMLVRTAMSNSFGFGGTNASLLF 158
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 118 bits (297), Expect = 5e-31
Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 18/210 (8%)
Query: 842 PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDP-IHAIIRGSGINYDGKTNGITA 900
PD FDERA G VP E +VL+ + A + G + + G +D +
Sbjct: 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFD---PAPGS 58
Query: 901 PNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCA 960
I+ + PED++ + G G D E A+ V + ++
Sbjct: 59 GRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRV-----FGREGVP 113
Query: 961 ITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKK 1020
+T K+ G ++ G + ++ + S++ +I + + + +
Sbjct: 114 VTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGI----DLVLGEPRS 169
Query: 1021 WNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050
R V A G G N+ VL+ +
Sbjct: 170 T-----APRTALVLARGRWGFNSAAVLRRF 194
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 115 bits (288), Expect = 1e-29
Identities = 28/209 (13%), Positives = 70/209 (33%), Gaps = 5/209 (2%)
Query: 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYG 692
+ I G+ P + +W +++ + + + FD Y + ++ +
Sbjct: 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTR--FDVSRYPATLAGQIDDFHAPDHI 59
Query: 693 SIPGIDEFDPLFFEISPLEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVE 752
+ + D L A + ES + N +
Sbjct: 60 PGRLLPQTD--PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRK 117
Query: 753 EGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQH 812
S + + A+ + +++ ++GP A+ + L A A +++R
Sbjct: 118 LWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIR-R 176
Query: 813 ECDTAISAGVNLMISPEAYIAMTSAGMLS 841
+S GV+ + P +++ ++G +S
Sbjct: 177 GTPLVVSGGVDSALDPWGWVSQIASGRIS 205
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 109 bits (273), Expect = 2e-28
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 882 AIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVE 941
A I G G DG + AP+G +K + I+Y+ +HGT T +GD E
Sbjct: 2 AEIVGYGATSDGAD--MVAPSGEGAVRCMKMAM---HGVDTPIDYLNSHGTSTPVGDVKE 56
Query: 942 INALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE 1001
+ A+ +VF +K+ AI++ K+ GH+ A+G+ I + +++ I S++ E+
Sbjct: 57 LAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEEL 111
Query: 1002 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQE 1049
+ N T + +L ++FG GTNA +V+++
Sbjct: 112 DEQAAGLNIV---------TETTDRELTTVMSNSFGFGGTNATLVMRK 150
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 102 bits (255), Expect = 9e-26
Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
Query: 880 IHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDP 939
I A + G G D P G + IK +++ ++PE + Y+ HGT T +
Sbjct: 2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 61
Query: 940 VEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCE 999
E A+ V K ++S KS GH A+G V I ++++++ +P +
Sbjct: 62 GESGAIVAVLG------KEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTS 115
Query: 1000 KENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050
+ ++YI + +++ + FG G NA + + +
Sbjct: 116 EVSDYIEANVVY---------GQGLEKEIPYAISNTFGFGGHNAVLAFKRW 157
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 64.6 bits (156), Expect = 8e-12
Identities = 38/246 (15%), Positives = 79/246 (32%), Gaps = 14/246 (5%)
Query: 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVD 293
K GT L+TGGTG +G + +L + + +L+L RS ++ +L
Sbjct: 7 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTV 66
Query: 294 VSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALN 353
+ + + ++ IG + + + + + A
Sbjct: 67 AACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGER-----IERASRAKV 121
Query: 354 YALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYT 413
N ++ L FSS ++ G G YA GN + A+ + +
Sbjct: 122 LGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGL----- 176
Query: 414 NKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLVLS 473
+ W W S G F+ + + + L + ++ +V+
Sbjct: 177 -PATAVAWGTWAGSGMAEGPVAD---RFRRHGVIEMPPETACRALQNALDRAEVCPIVID 232
Query: 474 GELEKL 479
++
Sbjct: 233 VRWDRF 238
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 58.7 bits (142), Expect = 6e-10
Identities = 24/169 (14%), Positives = 58/169 (34%), Gaps = 10/169 (5%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
G L+TGG +G + + + L + + + + QVD+
Sbjct: 4 AGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEGKEVAEAIG-----GAFFQVDL 57
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354
D+ + + + +G +D +++ A I+ S L + VL ++ + L+
Sbjct: 58 EDERERVRFVEEAAYALGRVDVLVNNAAIAAPGS-ALTVRLPEWRRVLEVNLTAPMHLSA 116
Query: 355 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
+++K + +S + + + Y + L
Sbjct: 117 LA---AREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSL 162
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (129), Expect = 3e-08
Identities = 28/187 (14%), Positives = 55/187 (29%), Gaps = 10/187 (5%)
Query: 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVD 293
G LITG +G L + + L+L + L K K K VD
Sbjct: 7 GEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETA-AKCKGLGAKVHTFVVD 64
Query: 294 VSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALN 353
S++ + S + IG + +++ AG+ + +
Sbjct: 65 CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLF-ATQDPQIEKTFEVNVLAHFWTT 123
Query: 354 YALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYT 413
A + + KN + +S++ + Y + K L ++
Sbjct: 124 KAF---LPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDE--LAALQ 178
Query: 414 NKLITIN 420
+
Sbjct: 179 ITGVKTT 185
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.5 bits (128), Expect = 4e-08
Identities = 32/188 (17%), Positives = 72/188 (38%), Gaps = 16/188 (8%)
Query: 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNN-KAIYIQV 292
G L+TG +G F++ L+ K + L + ++F K ++IQ
Sbjct: 3 GKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
DV+D+ ++ ++++ G +D +++ AG++ N KN+ L + I+
Sbjct: 62 DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVSVISG 112
Query: 353 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKY 412
Y + + K + + SS + ++ Y + + +
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSA---ALAANL 169
Query: 413 TNKLITIN 420
N + +N
Sbjct: 170 MNSGVRLN 177
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 52.6 bits (126), Expect = 7e-08
Identities = 22/169 (13%), Positives = 59/169 (34%), Gaps = 6/169 (3%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
+ +ITGG +G ++ ++ ++ ++ + + ++ DV
Sbjct: 4 KDKLAVITGGANGIGRAIAERFA-VEGADIAIADLVPAPEAE-AAIRNLGRRVLTVKCDV 61
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354
S + + +I+ G D +++ AGI L E ++ + + +
Sbjct: 62 SQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP-FDELTFEQWKKTFEINVDSGFLMAK 120
Query: 355 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
A + +++N + +S++ L Y + + L
Sbjct: 121 AF---VPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRAL 166
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 51.6 bits (123), Expect = 2e-07
Identities = 31/175 (17%), Positives = 56/175 (32%), Gaps = 15/175 (8%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
+G LITGG LG D + + + + +S +L + + + I
Sbjct: 4 KGEAVLITGGASGLGRALVDRFVAE-GAKVAVLDKSAERLAELE----TDHGDNVLGIVG 58
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANY----KNFYSVLSSKISG 348
DV + + G ID ++ AGI ++ +++ F V + G
Sbjct: 59 DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118
Query: 349 TIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
I A L V + S++ + G Y + L
Sbjct: 119 YIHAVKAC----LPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVREL 169
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 50.9 bits (121), Expect = 3e-07
Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 9/176 (5%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
T ++TGG +G+ F+ + N+ + RS + K K+F K Q
Sbjct: 8 VNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
DVS+ + I I ++GPI G++ AG+S + E +++F V + G
Sbjct: 67 DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP-ATELTHEDFAFVYDVNVFGVFNT 125
Query: 353 NYALENTILKLQK-----NKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
A+ L+ Q+ + S++ G Y + K L
Sbjct: 126 CRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGL 181
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 50.9 bits (121), Expect = 3e-07
Identities = 34/179 (18%), Positives = 69/179 (38%), Gaps = 10/179 (5%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVD 293
G L TG +G + L + ++ ++ G S K + +LKK + + IQ D
Sbjct: 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQAD 64
Query: 294 VSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALN 353
+S ++++ + +++ G +D V+ +G+ + LE + F V + G +
Sbjct: 65 ISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVA 123
Query: 354 YALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG----NRFQTVYAKYLNNKNI 408
LK + + S ++ + G YA F +A K +
Sbjct: 124 Q----QGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGV 178
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 50.4 bits (120), Expect = 4e-07
Identities = 23/171 (13%), Positives = 60/171 (35%), Gaps = 12/171 (7%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
QG L+TGG +G+ L+ + + S + + + ++++++
Sbjct: 5 QGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLA----AELGERSMFVRH 59
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
DVS + + ++ +G ++ +++ AGI ++ ++F +L
Sbjct: 60 DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIG 118
Query: 353 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
+ K + +S S+ L Y+ + +
Sbjct: 119 CQQG----IAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAA 165
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (117), Expect = 8e-07
Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 8/169 (4%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
G ++TGG +G + +++ + + + L++ A++I DV
Sbjct: 5 AGKVVVVTGGGRGIGAGIVRAFV-NSGARVVICDKDESGG---RALEQELPGAVFILCDV 60
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354
+ + + + ++ I G +D V++ AG E + + F +L + GT Y
Sbjct: 61 TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGT----Y 116
Query: 355 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
L L + V SS +G + Y T K L
Sbjct: 117 TLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKAL 165
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 48.9 bits (116), Expect = 1e-06
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
+G L+TGG+ LG + L +++++ R+ + + K +K+ + + +
Sbjct: 4 RGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSV 341
DVS+ ++ + ++ G +D V++ AGI+ E F V
Sbjct: 63 DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP-AEEFPLDEFRQV 110
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 48.9 bits (116), Expect = 1e-06
Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 14/171 (8%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN--KAIYIQV 292
+ LITG +G + K L+ + L++ A + +
Sbjct: 4 KDKAVLITGAAHGIGRATLELFA-KEGARLVACDIEE------GPLREAAEAVGAHPVVM 56
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
DV+D + + ++G +DGV+H AGI+ + + +++ VL ++G+ +
Sbjct: 57 DVADPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLV 115
Query: 353 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
A + + K ++S LG+ G +YA + L
Sbjct: 116 AKAASEAM----REKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTL 162
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (114), Expect = 3e-06
Identities = 35/201 (17%), Positives = 71/201 (35%), Gaps = 13/201 (6%)
Query: 240 LITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDK 297
L+TGG +G+ L +S +++L+ R + + + ++L+ + Q+D+ D
Sbjct: 7 LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-QQLQAEGLSPRFHQLDIDDL 65
Query: 298 LKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALE 357
+ + + + G +D +++ AGI+ + + + + GT + L
Sbjct: 66 QSIRALRDFLRKEYGGLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTEL- 123
Query: 358 NTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKY----LNNKNIYKKYT 413
L L K + V SS ++ + L NK +
Sbjct: 124 ---LPLIKPQ-GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179
Query: 414 NKLITINWPLWNNSKFKIGNN 434
WP KIG
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVT 200
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 47.7 bits (113), Expect = 3e-06
Identities = 27/172 (15%), Positives = 65/172 (37%), Gaps = 9/172 (5%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
+ T L+TGGT +G + + + R+ +LN + K +K +
Sbjct: 7 KAKTVLVTGGTKGIGHAIVEEFA-GFGAVIHTCARNEYELNECL-SKWQKKGFQVTGSVC 64
Query: 293 DVSDKLKMISEINSIINNI-GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA 351
D S + + + ++ + G +D +++ G + L+ ++F +S+ +
Sbjct: 65 DASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYH 123
Query: 352 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
L+ L+ + + + SS + ++ Y+ A+ L
Sbjct: 124 LSQLA---HPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNL 172
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 47.7 bits (113), Expect = 3e-06
Identities = 33/187 (17%), Positives = 70/187 (37%), Gaps = 9/187 (4%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
G +ITGGT +G+ + + + + ++++GR K ++ + Q D
Sbjct: 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354
SD+ ++ GP+ +++ AGI+ ++ E + +L+ + G
Sbjct: 64 SDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 355 ALENTILKLQKNKLD-FVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYT 413
I +++ L + SS +GD Y + +K K Y
Sbjct: 123 LG---IQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179
Query: 414 NKLITIN 420
+ +N
Sbjct: 180 ---VRVN 183
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 47.0 bits (111), Expect = 5e-06
Identities = 15/93 (16%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
G +ITG +G + ++++S + N ++ ++++ +A +
Sbjct: 10 DGKCAIITGAGAGIGKEIAITFA-TAGASVVVSDINADAANHVV-DEIQQLGGQAFACRC 67
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISG 325
D++ + ++ + + I+ +G +D +++ AG G
Sbjct: 68 DITSEQELSALADFAISKLGKVDILVNNAGGGG 100
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 46.9 bits (111), Expect = 7e-06
Identities = 24/176 (13%), Positives = 59/176 (33%), Gaps = 11/176 (6%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSII--YKKLKKFNNKAIYI 290
+ITG + +G + + + ++GR +L +
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62
Query: 291 QVDVSDKLKMISEINSIINNIGPIDGVLHIAGIS---GLTSNILEANYKNFYSVLSSKIS 347
DV+ +++ + G +D +++ AG + + + +++ + L+ +
Sbjct: 63 VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 122
Query: 348 GTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
IAL + L K + V S +S + Y++ Y +
Sbjct: 123 SVIALTKKA---VPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNT 175
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 46.3 bits (109), Expect = 8e-06
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 12/188 (6%)
Query: 226 KDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSI--IYKKLKKF 283
KD + G +ITG + LG + ++++ RSK + + +++KK
Sbjct: 3 KDLE------GKVVVITGSSTGLGKSMAIRFA-TEKAKVVVNYRSKEDEANSVLEEIKKV 55
Query: 284 NNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLS 343
+AI ++ DV+ + +I+ + S I G +D +++ AG+ S+ E + ++ V+
Sbjct: 56 GGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVID 114
Query: 344 SKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG--NRFQTVYAK 401
+ ++G + ++ F + G A
Sbjct: 115 TNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLAL 174
Query: 402 YLNNKNIY 409
K I
Sbjct: 175 EYAPKGIR 182
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 46.2 bits (109), Expect = 9e-06
Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 10/169 (5%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
G T L+TG +G D + +L+ R + ++ + + +AI + DV
Sbjct: 4 SGKTILVTGAASGIGRAALDLFARE-GASLVAVDREE--RLLAEAVAALEAEAIAVVADV 60
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354
SD + + + G + GV H AG++ + + + L
Sbjct: 61 SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVL-------RVNLTG 113
Query: 355 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
+ + + + S A LG FG YA G A+ L
Sbjct: 114 SFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTL 162
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (110), Expect = 9e-06
Identities = 20/169 (11%), Positives = 61/169 (36%), Gaps = 14/169 (8%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYK-KLKKFNNKAIYIQ 291
+ L+TG +G +G + L+ + ++ R+ + + + K + I +
Sbjct: 9 RDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67
Query: 292 VDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA 351
D+S++ ++S ++I + +D ++ AG+ +L + + + + +
Sbjct: 68 CDLSNEEDILSMFSAIRSQHSGVDICINNAGL-ARPDTLLSGSTSGWKDMFNVNVLALSI 126
Query: 352 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYA 400
++ + + + +S S + Y+
Sbjct: 127 CTREAYQSMKERNVDDGHIIN-INSMSGHRV--------LPLSVTHFYS 166
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 47.1 bits (111), Expect = 9e-06
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 12/151 (7%)
Query: 240 LITGGTGRLGMLFSDYLINK-YSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL 298
LITGG G +G ++I T + + + ++ +N+ + D+ D
Sbjct: 4 LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS- 62
Query: 299 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL-NYALE 357
+EI I P D V+H+A S ++ + + + + I GT AL A +
Sbjct: 63 ---AEITRIFEQYQP-DAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARK 113
Query: 358 NTILKLQKNKLDFVCYFSSSSAILGDFGSCD 388
+ K +F + S+ + GD D
Sbjct: 114 YWSALGEDKKNNFRFHHISTDEVYGDLPHPD 144
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.7 bits (108), Expect = 1e-05
Identities = 27/169 (15%), Positives = 55/169 (32%), Gaps = 11/169 (6%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
G L+TG +G L ++ R+ + L K + VD+
Sbjct: 4 SGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDL---VSLAKECPGIEPVCVDL 59
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354
D + IGP+D +++ A + + LE + F S + ++
Sbjct: 60 GDW----DATEKALGGIGPVDLLVNNAALVIMQP-FLEVTKEAFDRSFSVNLRSVFQVSQ 114
Query: 355 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
+ ++ + + SS A + Y+ T+ K +
Sbjct: 115 MVARDMIN--RGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAM 161
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 45.6 bits (107), Expect = 1e-05
Identities = 27/171 (15%), Positives = 61/171 (35%), Gaps = 7/171 (4%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
G L+TG G +G+ + L + T + L + L +++ +A
Sbjct: 4 NGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAE-ASVREKGVEARSYVC 61
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
DV+ + +I ++S++ + G ID + + AG G + + + +F V
Sbjct: 62 DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARV---LTINVTGA 118
Query: 353 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
+ L+ ++ + +S + + G Y +
Sbjct: 119 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETA 169
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 45.5 bits (107), Expect = 2e-05
Identities = 37/182 (20%), Positives = 57/182 (31%), Gaps = 11/182 (6%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNN-KAIYIQ 291
LITGG LG + L L L S L + L+ + + +
Sbjct: 3 TDRVVLITGGGSGLGRATAVRLA-AEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61
Query: 292 VDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA 351
DVSD+ ++ + + + G IDG + AGI G + F V+S + G
Sbjct: 62 ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 121
Query: 352 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR----FQTVYAKYLNNKN 407
+ + + V +S I G YA A
Sbjct: 122 GLEKVLKIMREQGSG---MVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYG 178
Query: 408 IY 409
I
Sbjct: 179 IR 180
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 45.4 bits (107), Expect = 2e-05
Identities = 31/176 (17%), Positives = 61/176 (34%), Gaps = 11/176 (6%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSI--IYKKLKKFNNKAIYI 290
T +ITG + +G + + N+ ++GRS +L I K + +
Sbjct: 4 SNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62
Query: 291 QVDVSDKLKMISEINSIINNIGPIDGVLHIAGIS---GLTSNILEANYKNFYSVLSSKIS 347
DV+ + INS + G ID +++ AG + + + ++ L +
Sbjct: 63 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 122
Query: 348 GTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
I + + L +K + V S + YA+ Y +
Sbjct: 123 AVIEMTKKV---KPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRST 175
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 45.0 bits (106), Expect = 2e-05
Identities = 23/173 (13%), Positives = 54/173 (31%), Gaps = 9/173 (5%)
Query: 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNN-KAIYIQVDVSD 296
T ++T GM + L + S K+ + Y Q+
Sbjct: 2 TAIVTNVKHFGGMGSALRLSEA-GHTVACHDESF------KQKDELEAFAETYPQLKPMS 54
Query: 297 KLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYAL 356
+ + I ++ + G +D ++ + I + +++ + + AL A+
Sbjct: 55 EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114
Query: 357 ENTILKLQKNKLDFVCYFSS-SSAILGDFGSCDYAMGNRFQTVYAKYLNNKNI 408
+ + K + + F+ + + A +K L NI
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNI 167
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 45.0 bits (106), Expect = 2e-05
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 7/169 (4%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
G T +ITGG LG + + ++L+ ++ + A Y +DV
Sbjct: 4 SGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGA--ATARELGDAARYQHLDV 60
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354
+ + + G +DG+++ AGIS E + + F V+ ++G
Sbjct: 61 TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE-SVERFRKVVEINLTGVFIGMK 119
Query: 355 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
+ I ++ + SS++ ++G + Y +K
Sbjct: 120 TV---IPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLA 165
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (104), Expect = 4e-05
Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 11/169 (6%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
G L+TG +G L ++ R++ + L + + VD+
Sbjct: 6 AGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADL---DSLVRECPGIEPVCVDL 61
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354
D + ++GP+D +++ A + L LE + F + I ++
Sbjct: 62 GDW----EATERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 355 ALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
+ ++ + + SS + Y + K +
Sbjct: 117 IVARGLIA--RGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM 163
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 44.1 bits (103), Expect = 5e-05
Identities = 16/124 (12%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 238 TYLITGGTGRLGMLFSDYLINK-YSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDV 294
+ ++TG +G+ L+ ++I + R K + +++ + + V
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIKDSRVHVLPLTV 60
Query: 295 SDKLKMISEINSIINNIG--PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
+ + + ++ + +G + +++ AG+ E N L + + L
Sbjct: 61 TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120
Query: 353 NYAL 356
L
Sbjct: 121 TQKL 124
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 43.9 bits (103), Expect = 5e-05
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 8/179 (4%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
Q +ITGG G +G + + +Y ++++ + + + ++ DV
Sbjct: 5 QDKVAIITGGAGGIGETTAKLFV-RYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV 63
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLT-SNILEANYKNFYSVLSSKISGTIALN 353
+ + + +++ I G +D + G+ T +ILEA ++F V+ + G +
Sbjct: 64 TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVA 123
Query: 354 YALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG----NRFQTVYAKYLNNKNI 408
+ + K V S SS G+ S Y T L I
Sbjct: 124 KHA--ARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 180
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 43.8 bits (103), Expect = 6e-05
Identities = 28/160 (17%), Positives = 65/160 (40%), Gaps = 9/160 (5%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
+G T L+TGG+ +G + L + ++ R+ +LN + + + K
Sbjct: 7 EGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCL-TQWRSKGFKVEASVC 64
Query: 293 DVSDKLKMISEINSIINNI-GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIA 351
D+S + + +N++ N+ G ++ +++ AGI + +++ ++S
Sbjct: 65 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYH 123
Query: 352 LNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391
L+ + + ++ V + SS S L Y
Sbjct: 124 LSVLAHPFL---KASERGNVVFISSVSGALAVPYEAVYGA 160
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 43.2 bits (101), Expect = 1e-04
Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 4/124 (3%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSI--IYKKLKKFNNKAIYIQV 292
+G L+TG +G + L + +I++ + S + +KK + A ++
Sbjct: 17 EGKVALVTGAGRGIGREMAMELG-RRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 75
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
+V ++ + G +D V +G+ + + + F V + G +
Sbjct: 76 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH-VKDVTPEEFDRVFTINTRGQFFV 134
Query: 353 NYAL 356
Sbjct: 135 AREA 138
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.7 bits (100), Expect = 1e-04
Identities = 31/177 (17%), Positives = 64/177 (36%), Gaps = 14/177 (7%)
Query: 235 QGGTYLITGGTGRLGMLFSDYL--------INKYSTNLILSGRSKLNSIIYKKLKKFNNK 286
G L+TG G LG ++ +N + G+ S K +++ +
Sbjct: 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGS--SAADKVVEEIRRR 63
Query: 287 AIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKI 346
+ + + ++ G ID V++ AGI S + +++ + +
Sbjct: 64 GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRS-FSRISDEDWDIIQRVHL 122
Query: 347 SGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
G+ + A ++K + +S+S I G+FG +Y+ A L
Sbjct: 123 RGSFQVTRA---AWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTL 176
|
| >d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} Length = 86 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP species: Streptomyces coelicolor, A3(2) [TaxId: 1902]
Score = 39.2 bits (91), Expect = 2e-04
Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Query: 504 FIENDIKNHICNILNTKK----SEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSI 559
+D++ + S + + D G+DS++L E + L Y + I +
Sbjct: 5 LTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDV 64
Query: 560 FFSYSTLERLITY 572
T L+
Sbjct: 65 AGRVDTPRELLDL 77
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 41.3 bits (96), Expect = 3e-04
Identities = 16/85 (18%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 240 LITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDK 297
L+TG +G + L+ K + ++ + ++ ++ + A+ ++VDVSD+
Sbjct: 5 LVTGAGQGIGKAIALRLV-KDGFAVAIADYNDATAKAVA-SEINQAGGHAVAVKVDVSDR 62
Query: 298 LKMISEINSIINNIGPIDGVLHIAG 322
++ + + +G D +++ AG
Sbjct: 63 DQVFAAVEQARKTLGGFDVIVNNAG 87
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 41.2 bits (96), Expect = 3e-04
Identities = 18/85 (21%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 240 LITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDK 297
L+TG T +G+ + L + + + R L + + K+L++ +A DV
Sbjct: 6 LVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTL-KELREAGVEADGRTCDVRSV 63
Query: 298 LKMISEINSIINNIGPIDGVLHIAG 322
++ + + +++ GP+D +++ AG
Sbjct: 64 PEIEALVAAVVERYGPVDVLVNNAG 88
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 40.8 bits (95), Expect = 5e-04
Identities = 22/180 (12%), Positives = 54/180 (30%), Gaps = 15/180 (8%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVD 293
+ G +G+ S L+ + N ++ R ++ K + D
Sbjct: 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYD 63
Query: 294 VSDKLKMISE-INSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
V+ + + + I + + +D +++ AGI + ++ +G +
Sbjct: 64 VTVPVAESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNT 114
Query: 353 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG----NRFQTVYAKYLNNKNI 408
A+ + K + + S + Y+ F AK +
Sbjct: 115 TTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGV 174
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (95), Expect = 5e-04
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 240 LITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAI-YIQVDVSDKL 298
L+TGG+G +G L+ +IL + +++ K +++ D+ ++
Sbjct: 4 LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63
Query: 299 KMISEINSIINNIGPIDGVLHIAGISGLTSNI 330
M I + ID V+H AG+ + ++
Sbjct: 64 LMTE-----ILHDHAIDTVIHFAGLKAVGESV 90
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 39.7 bits (92), Expect = 0.001
Identities = 13/93 (13%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
G L++GG +G ++ + ++ + ++ + + A Y+ +
Sbjct: 5 TGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMA----AELADAARYVHL 59
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISG 325
DV+ + + +++ + G + +++ AGI
Sbjct: 60 DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN 92
|
| >d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP species: Streptomyces roseofulvus [TaxId: 33902]
Score = 36.8 bits (85), Expect = 0.001
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 527 NKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITY 572
+ D G+DS++L E + +L + Y + + T L+
Sbjct: 29 DTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDE 74
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (91), Expect = 0.002
Identities = 26/167 (15%), Positives = 62/167 (37%), Gaps = 9/167 (5%)
Query: 227 DFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFN 284
+F+ ++ G ++TG + +G + +L K +++++ RS L ++ L+
Sbjct: 6 EFRPEMLQ-GKKVIVTGASKGIGREMAYHLA-KMGAHVVVTARSKETLQKVVSHCLELGA 63
Query: 285 NKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSS 344
A YI + D + +G +D + + I+ + N+ + + +
Sbjct: 64 ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDML-ILNHITNTSLNLFHDDIHHVRKSMEV 122
Query: 345 KISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391
+ L A L + K + SS + + Y+
Sbjct: 123 NFLSYVVLTVAA----LPMLKQSNGSIVVVSSLAGKVAYPMVAAYSA 165
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 39.8 bits (92), Expect = 0.002
Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 20/149 (13%)
Query: 240 LITGGTGRLGMLFSDYLINKYST-----NLILSGRSKLNSIIYKKLKKFNNKAIYIQVDV 294
LITG TG+ G +++L+ K S ++ IY+ N K D+
Sbjct: 5 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 64
Query: 295 SDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNY 354
SD + + + D V ++ +S + ++++ GT+ L
Sbjct: 65 SDTSNLTRILREV-----QPDEVYNLGAMSHVAV-----SFESPEYTADVDAMGTLRL-- 112
Query: 355 ALENTILKLQKNKLDFVCYFSSSSAILGD 383
LE + K F +S+S + G
Sbjct: 113 -LEAIRFLGLEKKTRFY--QASTSELYGL 138
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 38.9 bits (90), Expect = 0.002
Identities = 35/175 (20%), Positives = 74/175 (42%), Gaps = 9/175 (5%)
Query: 240 LITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKL 298
++TG + +G + L L+ RS K + K+++ + +AI DVS +
Sbjct: 5 VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEA 64
Query: 299 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALEN 358
+ + + + I+ G ID V++ AGI+ + ++ + V+ ++G A
Sbjct: 65 DVEAMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAA-- 121
Query: 359 TILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG----NRFQTVYAKYLNNKNIY 409
+ K + + +S ++G+ G +YA F A+ ++NI
Sbjct: 122 -TKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNIN 175
|
| >d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]} Length = 74 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Bacillus subtilis [TaxId: 1423]
Score = 35.9 bits (83), Expect = 0.002
Identities = 10/69 (14%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 505 IENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSY 563
+ I + L ++++ + D G D + + E L + ++I
Sbjct: 4 TLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKI 63
Query: 564 STLERLITY 572
+T+ + Y
Sbjct: 64 ATVGDAVNY 72
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 38.9 bits (90), Expect = 0.002
Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 9/174 (5%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSII--YKKLKKFNNKAIYI 290
G + +ITG + +G + K + ++GR+ +L K K +
Sbjct: 3 SGKSVIITGSSNGIGRSAAVIFA-KEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61
Query: 291 QVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSN-ILEANYKNFYSVLSSKISGT 349
DV++ IN+ + G ID +++ AG + + + +
Sbjct: 62 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 121
Query: 350 IALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
I + + L K K + V S + G YA Y +
Sbjct: 122 IEMTQKTKE---HLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCT 172
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (90), Expect = 0.003
Identities = 17/108 (15%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 226 KDFKNSYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK------LNSIIYKK 279
+ + + QG ++TGG +G L+ + +N++++ R + +
Sbjct: 2 RSYLAPGLLQGQVAIVTGGATGIGKAIVKELL-ELGSNVVIASRKLERLKSAADELQANL 60
Query: 280 LKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAGISGLT 327
+ I IQ ++ ++ ++ + + S ++ G I+ +++ G L+
Sbjct: 61 PPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLS 108
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 38.6 bits (89), Expect = 0.003
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 9/88 (10%)
Query: 240 LITGGTGRLGMLFSDYL------INKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQ 291
LITG +G + + L+LS R+ L I + + I
Sbjct: 5 LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKI-SLECRAEGALTDTIT 63
Query: 292 VDVSDKLKMISEINSIINNIGPIDGVLH 319
D+SD + I+ G ID +++
Sbjct: 64 ADISDMADVRRLTTHIVERYGHIDCLVN 91
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 38.6 bits (89), Expect = 0.003
Identities = 15/88 (17%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS---KLNSIIYKKLKKFNNKAIYIQ 291
+G ++TG T +G+ + L + +++L+G ++ + + K +Y
Sbjct: 3 KGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 292 VDVSDKLKMISEINSIINNIGPIDGVLH 319
D+S + +++ + +G ID +++
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVN 89
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 38.6 bits (89), Expect = 0.003
Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 6/171 (3%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
QG ITGG LG + L +++ R L + + + NK IQ
Sbjct: 24 QGKVAFITGGGTGLGKGMTTLLS-SLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 82
Query: 293 DVSDKLKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIAL 352
DV D + + ++ +I G + V++ A S + + ++ ++GT +
Sbjct: 83 DVRDPDMVQNTVSELIKVAGHPNIVINNA-AGNFISPTERLSPNAWKTITDIVLNGTAFV 141
Query: 353 NYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYL 403
+ ++K K ++ A G A +K L
Sbjct: 142 TLEIGKQLIK--AQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSL 190
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 37.9 bits (87), Expect = 0.004
Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS--KLNSIIYKKLKKFNNKAIYIQV 292
G T LITG +G F++ + + + ++ + + + A I +
Sbjct: 4 DGKTALITGSARGIGRAFAEAYVRE-GARVAIADINLEAARATA----AEIGPAACAIAL 58
Query: 293 DVSDKLKMISEINSIINNIGPID 315
DV+D+ + + +++ G ID
Sbjct: 59 DVTDQASIDRCVAELLDRWGSID 81
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1152 | |||
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 100.0 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.98 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.96 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.96 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.96 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.96 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.95 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.95 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.95 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.95 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.95 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.95 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.95 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.95 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.95 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.95 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.95 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.95 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.95 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.95 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.95 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.95 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.94 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.94 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.94 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.94 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.94 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.94 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.94 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.93 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.93 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.93 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.93 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.93 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.93 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.93 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.93 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.93 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.93 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.92 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.92 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.92 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.92 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.92 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.92 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.91 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.91 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.91 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.9 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.9 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.9 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.9 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.88 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.88 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.87 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.86 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.86 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.83 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.83 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.8 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.79 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.78 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.78 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.77 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.76 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.72 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.7 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.54 | |
| d2gdwa1 | 76 | Peptidyl carrier protein (PCP), thioester domain { | 99.37 | |
| d2af8a_ | 86 | Actinorhodin polyketide synthase acyl carrier prot | 99.34 | |
| d1vkua_ | 85 | Acyl carrier protein {Thermotoga maritima [TaxId: | 99.28 | |
| d1nq4a_ | 95 | Oxytetracycline polyketide synthase acyl carrier { | 99.27 | |
| d1klpa_ | 115 | Acyl carrier protein {Mycobacterium tuberculosis [ | 99.21 | |
| d1or5a_ | 82 | Frenolicin polyketide synthase acyl carrier protei | 99.21 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.2 | |
| d2pnga1 | 76 | Type I fatty acid synthase ACP domain {Rat (Rattus | 99.15 | |
| d1dv5a_ | 80 | apo-D-alanyl carrier protein {Lactobacillus casei | 99.13 | |
| d2jq4a1 | 83 | Hypothetical protein Atu2571 {Agrobacterium tumefa | 99.12 | |
| d1f80d_ | 74 | Acyl carrier protein {Bacillus subtilis [TaxId: 14 | 99.11 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.04 | |
| d1t8ka_ | 77 | Acyl carrier protein {Escherichia coli [TaxId: 562 | 98.98 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 98.93 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.93 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.86 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 98.84 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 98.84 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 98.8 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 98.77 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.74 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 98.72 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 98.68 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 98.68 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 98.65 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.6 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.56 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 98.56 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 98.56 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 98.55 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 98.52 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 98.45 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 98.42 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 98.38 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 98.36 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 98.35 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.34 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 98.26 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 98.22 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 98.22 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 98.2 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 98.17 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 98.08 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 98.03 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 97.95 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 97.91 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 97.79 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 97.77 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 97.72 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 97.59 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 97.5 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 97.39 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 97.27 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 97.23 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 97.18 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.02 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 97.02 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 96.99 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 96.89 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 96.48 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.42 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 96.28 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 96.11 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 95.96 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 95.75 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 95.75 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 95.72 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 95.66 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 95.62 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 95.44 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 95.28 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 95.12 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 95.12 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 94.93 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 94.88 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 94.82 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 94.79 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 94.77 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 94.55 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 94.55 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 94.53 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 94.51 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 94.43 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 94.38 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 94.37 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 94.32 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.28 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 94.19 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 94.15 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 94.09 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 94.02 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 93.99 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 93.99 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 93.98 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 93.91 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 93.89 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 93.88 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 93.81 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 93.77 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 93.76 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 93.75 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 93.75 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 93.74 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 93.65 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 93.65 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 93.63 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 93.6 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 93.35 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 93.33 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 93.32 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 93.19 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 93.07 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 93.05 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 92.99 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 92.92 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 92.79 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 92.74 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 92.69 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 92.49 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 92.38 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 92.33 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 92.11 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 92.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 91.97 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 91.96 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 91.9 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 91.87 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 91.04 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 90.91 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 90.79 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 90.7 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 90.62 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 90.53 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 90.37 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 89.99 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 89.88 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 89.33 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 89.11 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 88.76 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 88.19 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 88.14 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 88.1 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 87.92 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 87.44 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 86.94 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 86.81 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 86.81 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 86.25 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 85.28 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 85.25 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 85.03 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 84.29 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 84.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 83.21 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 82.23 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 82.05 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 81.84 |
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=5.3e-49 Score=416.13 Aligned_cols=199 Identities=25% Similarity=0.377 Sum_probs=185.3
Q ss_pred CCCCcccCCCCCCCcccccccEEEEEcccchhhcCCCceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q psy616 842 PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGDPIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNP 921 (1152)
Q Consensus 842 ~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p 921 (1152)
|+|+|||||+++|||++|||++++|||++++|++||++|||+|+|+++++||++.+.+.|++.+|.++++++|++++++|
T Consensus 3 P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~ 82 (205)
T d1tqya2 3 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDA 82 (205)
T ss_dssp GGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred CCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCC
Q psy616 922 EDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKE 1001 (1152)
Q Consensus 922 ~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~ 1001 (1152)
+||+|||+|||||++||++|+++|.++|+... .+++|+|+|+++||+++|||+++|+|++++|++|+|||++|++++
T Consensus 83 ~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~---~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~ 159 (205)
T d1tqya2 83 TDIDYINAHGSGTRQNDRHETAAYKRALGEHA---RRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTS 159 (205)
T ss_dssp GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGG---GGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSB
T ss_pred cceeeeeccccccccCchhHHHHHHHhhcccc---CCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCC
Confidence 99999999999999999999999999998643 347899999999999999999999999999999999999999999
Q ss_pred CcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccccc
Q psy616 1002 NNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEYIS 1052 (1152)
Q Consensus 1002 np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~~~ 1052 (1152)
||.++++ +++.+.++| +.|++++|||||||+|+|+||++++.
T Consensus 160 ~p~~~~~----~v~~~~~~~-----~~~~a~~~s~GfGG~na~~vl~~~~~ 201 (205)
T d1tqya2 160 DPECDLD----YVPLEARER-----KLRSVLTVGSGFGGFQSAMVLRDAET 201 (205)
T ss_dssp BTTBCSC----CCBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECHHH
T ss_pred CCCCCcc----cCCCCCcCC-----CCCEEEEeCCCCCceeEEEEEeeCCC
Confidence 9999775 344444444 45789999999999999999998754
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=5.2e-47 Score=396.68 Aligned_cols=192 Identities=22% Similarity=0.320 Sum_probs=173.8
Q ss_pred CCCCcccCCCCCCCcccccccEEEEEcccchhhcCCC-ceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy616 842 PDGKCYVFDERANGLVPSEAVVAVVLKRLSRALSDGD-PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLN 920 (1152)
Q Consensus 842 ~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd-~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~ 920 (1152)
|++.|||||+++|||++|||++++|||++++|+++|+ +|||+|.|+++++||.+.. +++.+|+++|++||++++++
T Consensus 2 p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~---~~~~g~~~~i~~aL~~a~i~ 78 (194)
T d1tqyb2 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS---GRPAGLERAIRLALNDAGTG 78 (194)
T ss_dssp GGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC---CCCCSHHHHHHHHHHHHTCC
T ss_pred CCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc---cchhhhhhhhhhhccccccc
Confidence 7889999999999999999999999999999999998 5999999999999996532 34456899999999999999
Q ss_pred CCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCC
Q psy616 921 PEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEK 1000 (1152)
Q Consensus 921 p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~ 1000 (1152)
|+||+|||+|||||++||++|++||.++|+.. .++|+|+|+++||+++|||+++|+|++++|++|+|||++|+++
T Consensus 79 ~~di~~v~ahgtGt~~~D~~E~~al~~~f~~~-----~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~ 153 (194)
T d1tqyb2 79 PEDVDVVFADGAGVPELDAAEARAIGRVFGRE-----GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTS 153 (194)
T ss_dssp GGGCCEEECCCCCSHHHHHHHHHHHHHHHCTT-----CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCC
T ss_pred ccceeeeeccccCcccccHHHhhhhhhhhhcc-----ccccccccccccccccccccceehhhhhhhhhceeccccCCCC
Confidence 99999999999999999999999999999743 3789999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEccc
Q psy616 1001 ENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQEY 1050 (1152)
Q Consensus 1001 ~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~~~ 1050 (1152)
+||.++++ .+.+++++| ++|+++||||||||+|+|+||++|
T Consensus 154 ~~~~~~~~----~v~~~~~~~-----~~~~a~v~s~GfgG~na~~vl~~~ 194 (194)
T d1tqyb2 154 VPREYGID----LVLGEPRST-----APRTALVLARGRWGFNSAAVLRRF 194 (194)
T ss_dssp CCGGGCCE----ECBSSCBCC-----CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCcccCcc----ccCCCCccC-----CCCEEEEECcCCCceeEEEEEeeC
Confidence 99987653 445544443 468899999999999999999986
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=8.6e-44 Score=390.21 Aligned_cols=232 Identities=23% Similarity=0.293 Sum_probs=203.7
Q ss_pred CCcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCH
Q psy616 630 EELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISP 709 (1152)
Q Consensus 630 ~~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~ 709 (1152)
+++||||||||++|++.|+++||++|.+|+++|+++| ||+...+ +.++.|.++ ++..+|.+++
T Consensus 1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~--~~~~~~~-----------~~~~~g~~~----~~~~~~~~~~ 63 (250)
T d1e5ma1 1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPIT--RFDASDQ-----------ACRFGGEVK----DFDATQFLDR 63 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTTS-----------SCCEEECCC----SCCGGGTSCH
T ss_pred CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCC--ccccccc-----------cccccceee----ecccccccch
Confidence 3689999999999999999999999999999999877 6664332 345566654 3445567999
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHH
Q psy616 710 LEAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSA 776 (1152)
Q Consensus 710 ~ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~ 776 (1152)
++.+.|||+++++++++++||+|||+.++.+...++||++|+..+.... ....+........+.+++
T Consensus 64 ~~~~~~d~~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 143 (250)
T d1e5ma1 64 KEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASG 143 (250)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHH
T ss_pred hhhhhcCcHHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhh
Confidence 9999999999999999999999999999999999999999987654211 112233445566778999
Q ss_pred HHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC-----CCCcccCCC
Q psy616 777 RLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDE 851 (1152)
Q Consensus 777 ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~-----~g~~~~Fd~ 851 (1152)
++++.||++||+++|++|||||+.||++|+++|++|+||++||||++..++|..+..|+++++||. +++|||||.
T Consensus 144 ~is~~~gl~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~ 223 (250)
T d1e5ma1 144 LTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDK 223 (250)
T ss_dssp HHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBT
T ss_pred hHHHhccCCCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999984 678999999
Q ss_pred CCCCcccccccEEEEEcccchhhcCCC
Q psy616 852 RANGLVPSEAVVAVVLKRLSRALSDGD 878 (1152)
Q Consensus 852 ~a~G~v~gEG~~~vvLk~l~~A~~dgd 878 (1152)
++|||++|||++++|||++++|++||+
T Consensus 224 ~~dG~~~gEGa~~~vLe~l~~A~~rGA 250 (250)
T d1e5ma1 224 DRDGFVMGEGSGILILEELESALARGA 250 (250)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred CCCCEeeEeeEEEEEEeeHHHHHHCcC
Confidence 999999999999999999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.7e-44 Score=391.79 Aligned_cols=230 Identities=23% Similarity=0.328 Sum_probs=200.2
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|||||||+++|++.|+++||++|.+|+++|++++ ||+...+ +.+.++..+ +++..+ ++++
T Consensus 2 ~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~--~~~~~~~-----------~~~~~~~~~----~~~~~~-~~~~ 63 (249)
T d1j3na1 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPIT--RFDASAL-----------PVRIAAEVD----VDPGAY-LDRK 63 (249)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC--SSCCTTS-----------SCCEEECCC----CCGGGT-SCHH
T ss_pred CcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCC--ccccccC-----------Ccccccccc----cccccc-ccHH
Confidence 469999999999999999999999999999999876 5654332 223334332 333333 7899
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 777 (1152)
+++.|||++|++++++++||+|||++++++.+.|||||+|++.+.... ..+++..+.....+.+++|
T Consensus 64 ~~~~~d~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (249)
T d1j3na1 64 ELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAH 143 (249)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhh
Confidence 999999999999999999999999999999999999999988765321 1123444566777899999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC-----CCCcccCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDER 852 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~-----~g~~~~Fd~~ 852 (1152)
|+++|||+||+++|++||+||++||++|+++|++|+||+|||||++..++|..+..|+..++||. +++|||||.+
T Consensus 144 is~~~gl~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~ 223 (249)
T d1j3na1 144 IAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLS 223 (249)
T ss_dssp HHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred hHhhcCCCCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999984 6789999999
Q ss_pred CCCcccccccEEEEEcccchhhcCCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGD 878 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd 878 (1152)
+|||++|||++++|||++++|++||+
T Consensus 224 ~dG~v~gEGa~~lvLe~~~~A~~rGA 249 (249)
T d1j3na1 224 RDGFVMGEGAGVLVLEAYEHAKKRGA 249 (249)
T ss_dssp CCCBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred CCCEeeEeEEEEEEEccHHHHHHCcC
Confidence 99999999999999999999999985
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.7e-44 Score=390.44 Aligned_cols=231 Identities=22% Similarity=0.305 Sum_probs=203.6
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|||||||+++|++.++++||++|.+|+++|+++| ||+...+ ..++++.+++ |++. ..++++
T Consensus 2 rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~--~~~~~~~-----------~~~~~~~v~~---~~~~-~~~~~~ 64 (250)
T d2gfva1 2 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLID--HFDTSAY-----------ATKFAGLVKD---FNCE-DIISRK 64 (250)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTTC-----------SCCEEECCTT---CCCT-TTSCHH
T ss_pred CeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCC--ccccccc-----------CCccceeccc---chhh-hhhhhH
Confidence 679999999999999999999999999999999886 5554332 3466777665 4443 347899
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSAR 777 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~r 777 (1152)
+.+.|||+++++++++++||+|||+..++++..++||++|++.+.... ..+.+..++....+.++++
T Consensus 65 ~~~~~d~~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 144 (250)
T d2gfva1 65 EQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGH 144 (250)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred HHhhcCHHHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHH
Confidence 999999999999999999999999999999999999999987655321 1123445566778899999
Q ss_pred HHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC-----CCCcccCCCC
Q psy616 778 LAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-----DGKCYVFDER 852 (1152)
Q Consensus 778 is~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~-----~g~~~~Fd~~ 852 (1152)
||+.|||+||+++|++||+||+.||++|+++|++|+||+|||||++..++|..+..|+.+++||. ++.|||||++
T Consensus 145 ia~~~gl~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~ 224 (250)
T d2gfva1 145 LTIMYGLRGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKE 224 (250)
T ss_dssp HHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred HHHHhCCCCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999994 5779999999
Q ss_pred CCCcccccccEEEEEcccchhhcCCC
Q psy616 853 ANGLVPSEAVVAVVLKRLSRALSDGD 878 (1152)
Q Consensus 853 a~G~v~gEG~~~vvLk~l~~A~~dgd 878 (1152)
+|||++|||++++|||++++|++||+
T Consensus 225 rdG~v~gEGaa~lVLE~~~~A~~rGA 250 (250)
T d2gfva1 225 RDGFVLGDGAGMLVLEEYEHAKKRGA 250 (250)
T ss_dssp CCSBCBBCEEEEEEEEEHHHHHHHTC
T ss_pred CCCEeeeeEEEEEEECcHHHHHHCcC
Confidence 99999999999999999999999985
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=7e-40 Score=362.81 Aligned_cols=246 Identities=20% Similarity=0.260 Sum_probs=199.9
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcC-CCCCccceeeeecCC---CCCCCCcCCC
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIK-SSNKINSKWYGSIPG---IDEFDPLFFE 706 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~-~~~~~~~~~~g~~~~---~~~FD~~~f~ 706 (1152)
++||||||||++|++.++++||++|.+|+++|+++|..||+...++..... .......+++++++. ...||..+|.
T Consensus 1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (270)
T d2ix4a1 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (270)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHhh
Confidence 469999999999999999999999999999999999999997766433211 112344566777643 2334444443
Q ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHhcCCCCCC-CCCCceEEEEEeccCCc-------------hhccccccccccchhh
Q psy616 707 ISPLEAERMDPRQRHLLQESWLALEDAGYGPNQ-IANQKIGMFVGVEEGSN-------------YQDRLDQVNLTSTHNA 772 (1152)
Q Consensus 707 is~~ea~~mdpq~rl~L~~a~~AledAG~~~~~-l~~~~~gv~~g~~~~~~-------------~~~~~~~~~~~~~~~~ 772 (1152)
....+++.....+.+..+|++|+|+.... ....++++.++...... ......+..+++...+
T Consensus 81 ----~~~~~~~~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (270)
T d2ix4a1 81 ----NSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVN 156 (270)
T ss_dssp ----CSTTCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTT
T ss_pred ----hhhhhhhhHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccc
Confidence 34457788888888999999999986433 23345666665543321 1122344556677788
Q ss_pred HHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC------CCCc
Q psy616 773 ILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP------DGKC 846 (1152)
Q Consensus 773 ~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~------~g~~ 846 (1152)
++++|||++|||+||+++|++|||||+.||++|+++|++|+||+|||||++..++|..+..|+..++||. +++|
T Consensus 157 ~~a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~ 236 (270)
T d2ix4a1 157 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEAS 236 (270)
T ss_dssp HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSC
T ss_pred hhHHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999974 5789
Q ss_pred ccCCCCCCCcccccccEEEEEcccchhhcCCCce
Q psy616 847 YVFDERANGLVPSEAVVAVVLKRLSRALSDGDPI 880 (1152)
Q Consensus 847 ~~Fd~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i 880 (1152)
||||+++|||++|||++++|||++++|++|||+|
T Consensus 237 rPFD~~a~G~v~gEGaa~~vLe~l~~A~~rG~~I 270 (270)
T d2ix4a1 237 RPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270 (270)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence 9999999999999999999999999999999997
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=4.7e-40 Score=333.26 Aligned_cols=161 Identities=25% Similarity=0.379 Sum_probs=148.3
Q ss_pred ceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCc
Q psy616 879 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 958 (1152)
Q Consensus 879 ~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~ 958 (1152)
||||+|+|+++|+||++.+.++|++.+|+++|++||++||++|+||+|||+|||||++||++|.+||+++|+... .+
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~---~~ 77 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHA---YN 77 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGG---GG
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCC---Cc
Confidence 799999999999999999999999999999999999999999999999999999999999999999999998643 35
Q ss_pred eeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCC
Q psy616 959 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGM 1038 (1152)
Q Consensus 959 ~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~ 1038 (1152)
++|+|+|+++||+++|||+++++|++++|++++|||++|+++|||.+++.. ++.+.++| +.+++++|||||
T Consensus 78 ~~v~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~----~~~~~~~~-----~~~~a~~nsfGf 148 (161)
T d1e5ma2 78 IAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDY----VPGQSRAL-----IVDVALSNSFGF 148 (161)
T ss_dssp SEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCC----CBSSCEEC-----CCSEEEEEEEET
T ss_pred ceEEecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCccc----CcCcccCC-----CCCEEEEeCcCc
Confidence 899999999999999999999999999999999999999999999887553 34555555 357899999999
Q ss_pred CcceEEEEEcccc
Q psy616 1039 SGTNAHIVLQEYI 1051 (1152)
Q Consensus 1039 gG~nah~il~~~~ 1051 (1152)
||+|+|+||++|.
T Consensus 149 GG~Na~lvl~~y~ 161 (161)
T d1e5ma2 149 GGHNVTLAFKKYQ 161 (161)
T ss_dssp TTEEEEEEEECCC
T ss_pred CcEeEEEEEeeeC
Confidence 9999999999983
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.5e-39 Score=330.02 Aligned_cols=160 Identities=22% Similarity=0.394 Sum_probs=144.2
Q ss_pred ceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCc
Q psy616 879 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 958 (1152)
Q Consensus 879 ~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~ 958 (1152)
||||+|+|+++|+||++.+.++|++.+|+++|+++|+++|++|+||+|||+|||||++||++|++||.++|+... .+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~---~~ 77 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAA---SR 77 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGG---TT
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccc---cc
Confidence 799999999999999999999999999999999999999999999999999999999999999999999998643 45
Q ss_pred eeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCC
Q psy616 959 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGM 1038 (1152)
Q Consensus 959 ~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~ 1038 (1152)
|+|+|+|+++||+++|||+++++|++++|++++|||++|+++++|.+.+...+ .+..+| ..+|+++||||||
T Consensus 78 ~~i~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~a~vnsfGf 149 (161)
T d2gfva2 78 VLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVP----HEARQV----SGMEYTLCNSFGF 149 (161)
T ss_dssp SEEECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCB----SSCEEC----SSCCEEEEEEEEG
T ss_pred ceeccccccccccHHHHHHHHHHHHHHHhcCCEeccccccccccccccccccc----ccCccC----CCCcEEEEeCcCc
Confidence 89999999999999999999999999999999999999999999987654222 222222 3468899999999
Q ss_pred CcceEEEEEcc
Q psy616 1039 SGTNAHIVLQE 1049 (1152)
Q Consensus 1039 gG~nah~il~~ 1049 (1152)
||+|+|+|||+
T Consensus 150 gG~Na~lil~~ 160 (161)
T d2gfva2 150 GGTNGSLIFKK 160 (161)
T ss_dssp GGEEEEEEEEC
T ss_pred cceeEEEEEEE
Confidence 99999999986
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9.1e-39 Score=350.65 Aligned_cols=231 Identities=21% Similarity=0.228 Sum_probs=190.4
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++|||||||+++|++.++++||++|++|+++|+++|. |+...+ ..+.++.+ +.+...+ +...
T Consensus 2 ~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~--~~~~~~-----------~~~~~~~~---~~~~~~~--~~~~ 63 (253)
T d2vbaa1 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQE--LKDSGM-----------RSHVWGNV---KLDTTGL--IDRK 63 (253)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHH--HHHTTC-----------SCCEEECC---CCCCTTS--SCHH
T ss_pred CcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCc--cccccC-----------cccccccc---ccccccc--ccch
Confidence 4799999999999999999999999999999998874 222111 11222222 2233333 5788
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCC-CCCceEEEEEeccCCchh--------------ccccccccccchhhHHH
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQI-ANQKIGMFVGVEEGSNYQ--------------DRLDQVNLTSTHNAILS 775 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l-~~~~~gv~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~a 775 (1152)
+.+.+|+..++.+.++.+|++|+|+..... ...++|+++|...+.... ...++..++....+.++
T Consensus 64 ~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 143 (253)
T d2vbaa1 64 VVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVS 143 (253)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHH
T ss_pred hhccchhhhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhcccccccc
Confidence 999999999999999999999999976543 456899999987664211 11233445666778999
Q ss_pred HHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCC------CCCCcccC
Q psy616 776 ARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLS------PDGKCYVF 849 (1152)
Q Consensus 776 ~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls------~~g~~~~F 849 (1152)
++||+.|||+||+++|++|||||++||++|+++|++|+||+|||||++...++ ....|..+++++ |++.||||
T Consensus 144 ~~is~~~g~~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~-~~~~~~~~~~ls~~~~~~P~~~~rPF 222 (253)
T d2vbaa1 144 ACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE-MACEFDAMGALSTKYNDTPEKASRTY 222 (253)
T ss_dssp HHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH-HHHHHHHTTCBCCSCTTSGGGSCCTT
T ss_pred ceeccccCcccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhcc-hhhhHHHHHHHhcCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999975444 567788888876 57899999
Q ss_pred CCCCCCcccccccEEEEEcccchhhcCCCce
Q psy616 850 DERANGLVPSEAVVAVVLKRLSRALSDGDPI 880 (1152)
Q Consensus 850 d~~a~G~v~gEG~~~vvLk~l~~A~~dgd~i 880 (1152)
|+++|||++|||++++|||++++|++|||+|
T Consensus 223 D~~~~G~v~gEGa~~lvLe~le~A~~rGa~I 253 (253)
T d2vbaa1 223 DAHRDGFVIAGGGGMVVVEELEHALARGAHI 253 (253)
T ss_dssp BTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCEeeeeEEEEEEEccHHHHHHccCcC
Confidence 9999999999999999999999999999997
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=6.3e-39 Score=324.51 Aligned_cols=158 Identities=28% Similarity=0.427 Sum_probs=144.2
Q ss_pred ceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCc
Q psy616 879 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 958 (1152)
Q Consensus 879 ~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~ 958 (1152)
||||+|+|+++|+||++.+.++|++.+|.++|+++|++||++|+||+|||+|||||++||++|+.||.++|+... ++
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~---~~ 77 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHA---KR 77 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHH---TT
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcC---CC
Confidence 699999999999999999999999999999999999999999999999999999999999999999999997643 34
Q ss_pred eeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCC
Q psy616 959 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGM 1038 (1152)
Q Consensus 959 ~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~ 1038 (1152)
|+|+|+|+++||+++|||+++++|++++|++++|||++|++++||.+++...+ |+. ..++|+++||||||
T Consensus 78 ~~i~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~---------~~~-~~~~~~a~v~sfGf 147 (159)
T d1j3na2 78 LMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP---------EPR-EAKVDYALSNSFAF 147 (159)
T ss_dssp CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS---------SCE-ECCCSEEEEEEECT
T ss_pred ceEecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccC---------ccc-CCCCCEEEEeCCCC
Confidence 89999999999999999999999999999999999999999999987664322 222 12468999999999
Q ss_pred CcceEEEEEcc
Q psy616 1039 SGTNAHIVLQE 1049 (1152)
Q Consensus 1039 gG~nah~il~~ 1049 (1152)
||+|+|+|||+
T Consensus 148 gG~Na~~vl~k 158 (159)
T d1j3na2 148 GGHNAVLAFKR 158 (159)
T ss_dssp TSEEEEEEEEC
T ss_pred CceeEEEEEEE
Confidence 99999999985
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=1.8e-38 Score=320.34 Aligned_cols=158 Identities=23% Similarity=0.376 Sum_probs=145.0
Q ss_pred ceEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCc
Q psy616 879 PIHAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 958 (1152)
Q Consensus 879 ~i~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~ 958 (1152)
+|||+|+|+++|+||++...++|++.+|.++|++||+++|++|+||+|||+|||||++||++|+.+|.++|++ .
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~------~ 74 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK------E 74 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS------S
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCC------c
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999974 2
Q ss_pred eeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCC
Q psy616 959 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGM 1038 (1152)
Q Consensus 959 ~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~ 1038 (1152)
++|+|+|+++||+++|||+++++|++++|++++|||++|++++||.+.+. ++..+.++| +.|++++|||||
T Consensus 75 ~~v~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~a~~nsfGf 145 (158)
T d1ox0a2 75 VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEAN----VVYGQGLEK-----EIPYAISNTFGF 145 (158)
T ss_dssp SEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSE----ECBSSCEEC-----CCSEEEEEEEET
T ss_pred ccCcCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcc----cccCccccC-----CCCEEEEeCcCC
Confidence 78999999999999999999999999999999999999999999988653 344444443 468899999999
Q ss_pred CcceEEEEEcccc
Q psy616 1039 SGTNAHIVLQEYI 1051 (1152)
Q Consensus 1039 gG~nah~il~~~~ 1051 (1152)
||+|+|+||++|.
T Consensus 146 GG~Na~lvl~~~~ 158 (158)
T d1ox0a2 146 GGHNAVLAFKRWE 158 (158)
T ss_dssp TTEEEEEEEECCC
T ss_pred CcEeEEEEEEecC
Confidence 9999999999873
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=5.2e-38 Score=318.42 Aligned_cols=160 Identities=26% Similarity=0.412 Sum_probs=142.1
Q ss_pred EEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCcee
Q psy616 881 HAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCA 960 (1152)
Q Consensus 881 ~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ 960 (1152)
||+|.|+++|+||++...+.|++.+|..+|+++|++++++|+||+|||+|||||++||++|++||+++|+... ...+|+
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~-~~~~~~ 79 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHA-TSGTLA 79 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHH-HTSCSE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccc-ccccee
Confidence 8999999999999976666667788888999999999999999999999999999999999999999998643 234689
Q ss_pred eeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCc
Q psy616 961 ITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSG 1040 (1152)
Q Consensus 961 igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG 1040 (1152)
|+|+|+|+||+++|||+++++|++++|++++|||++|++++||.+++...++... ++ ..+|++++|||||||
T Consensus 80 i~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~a~~nsfGfgG 151 (161)
T d2ix4a2 80 FSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTS---KK-----MLVRTAMSNSFGFGG 151 (161)
T ss_dssp EECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSC---EE-----CCCSEEEEEEEETTT
T ss_pred eeccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccC---CC-----CCcCEEEEeCCcccc
Confidence 9999999999999999999999999999999999999999999988776554221 11 246899999999999
Q ss_pred ceEEEEEcc
Q psy616 1041 TNAHIVLQE 1049 (1152)
Q Consensus 1041 ~nah~il~~ 1049 (1152)
+|+|+||++
T Consensus 152 ~Na~lvl~~ 160 (161)
T d2ix4a2 152 TNASLLFAS 160 (161)
T ss_dssp EEEEEEEEC
T ss_pred eeEEEEEEe
Confidence 999999985
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3e-36 Score=301.34 Aligned_cols=150 Identities=29% Similarity=0.442 Sum_probs=137.0
Q ss_pred EEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCcee
Q psy616 881 HAIIRGSGINYDGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCA 960 (1152)
Q Consensus 881 ~avI~g~a~~~dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~ 960 (1152)
||+|+|+++|+||.+ +++|++++|.++|+++++++ +.||+|||+|||||++||++|++||.++|+.. .++
T Consensus 1 Yaei~G~g~~~Dg~~--~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~-----~~~ 70 (151)
T d2vbaa2 1 YAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDK-----SPA 70 (151)
T ss_dssp CEEEEEEEEEECCSC--TTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTC-----CCE
T ss_pred CEEEEEEEEecCCCC--CCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCC-----Ccc
Confidence 899999999999964 89999999999999999876 67899999999999999999999999999743 378
Q ss_pred eeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCc
Q psy616 961 ITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSG 1040 (1152)
Q Consensus 961 igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG 1040 (1152)
|+|+|+++||+++|||+++++|++++|++++|||++|+++++|.+ ..+++.++.++|+ +|++++|||||||
T Consensus 71 v~s~K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~----~~~~v~~~~~~~~-----~~~a~~nsfGfGG 141 (151)
T d2vbaa2 71 ISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQA----AGLNIVTETTDRE-----LTTVMSNSFGFGG 141 (151)
T ss_dssp EECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTC----TTSEECCSCEECC-----CCEEEEEEEETTT
T ss_pred cccchhhccccccchhhhhhhHHHHHHHcCCcccccCcccccccc----ccccccCcCcCCC-----CCEEEEeCCcccc
Confidence 999999999999999999999999999999999999999999864 3456777777774 5789999999999
Q ss_pred ceEEEEEcc
Q psy616 1041 TNAHIVLQE 1049 (1152)
Q Consensus 1041 ~nah~il~~ 1049 (1152)
+|+|+|||+
T Consensus 142 ~Na~~vl~~ 150 (151)
T d2vbaa2 142 TNATLVMRK 150 (151)
T ss_dssp EEEEEEEEC
T ss_pred eeEEEEEEE
Confidence 999999986
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=4.8e-34 Score=313.94 Aligned_cols=238 Identities=19% Similarity=0.269 Sum_probs=204.3
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc----chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHH
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK----LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINS 306 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~----~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 306 (1152)
..|++++|||||||++|||+++|++|+++|+++|++++|+. ..+++.+++++.|.++.++.||++|+++++++++.
T Consensus 4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~ 83 (259)
T d2fr1a1 4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG 83 (259)
T ss_dssp CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence 46899999999999999999999999999999999999873 33566778888899999999999999999999999
Q ss_pred HHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC
Q psy616 307 IINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 386 (1152)
Q Consensus 307 ~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~ 386 (1152)
+.+. +++|+||||||+.. +.++.+++.++|++++++|+.|+++|+++ +...+.++||++||+++..|.+|+
T Consensus 84 i~~~-~~i~~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~-------~~~~~~~~iv~~SS~a~~~g~~~~ 154 (259)
T d2fr1a1 84 IGDD-VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHEL-------TRELDLTAFVLFSSFASAFGAPGL 154 (259)
T ss_dssp SCTT-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHH-------HTTSCCSEEEEEEEHHHHTCCTTC
T ss_pred cccc-cccccccccccccc-ccccccccHHHHHHHhhhhccchhHHHHH-------hhccCCceEeeecchhhccCCccc
Confidence 8664 69999999999998 88999999999999999999999999987 344567899999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 387 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
++|+++|+|+++|+++++.+|+ ++.+|+||+|.++||.... ....++..|+.+|++++++++|.+++..+.
T Consensus 155 ~~YaAaka~l~~la~~~~~~Gi------~v~~I~pg~~~~~g~~~~~---~~~~~~~~G~~~~~~~~~~~~l~~~l~~~~ 225 (259)
T d2fr1a1 155 GGYAPGNAYLDGLAQQRRSDGL------PATAVAWGTWAGSGMAEGP---VADRFRRHGVIEMPPETACRALQNALDRAE 225 (259)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTC------CCEEEEECCBC---------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhHHHHHHHHHhCCC------CEEECCCCcccCCccccch---HHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999999999999998876 8999999999999997542 223456778999999999999999999998
Q ss_pred eeeeeechhhhHHHHHHhhc
Q psy616 467 IQYLVLSGELEKLNQIINNI 486 (1152)
Q Consensus 467 ~~~~v~~~~~~~~~~~~~~~ 486 (1152)
.+.++.+.||.++...+...
T Consensus 226 ~~~~v~~~d~~~~~~~~~~~ 245 (259)
T d2fr1a1 226 VCPIVIDVRWDRFLLAYTAQ 245 (259)
T ss_dssp SSCEECEECHHHHHHHHTSS
T ss_pred ceEEEEeCcHHHHHHhhhcc
Confidence 88889999998876655433
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=3.2e-33 Score=296.90 Aligned_cols=192 Identities=19% Similarity=0.305 Sum_probs=167.4
Q ss_pred EEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHHHh
Q psy616 633 IAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPLEA 712 (1152)
Q Consensus 633 IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ea 712 (1152)
|||+||||++|++.++++||++|++|+++|++++ ||+...+ ..+.+|.++ .||+.++ +++++.
T Consensus 2 VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~--~~~~~~~-----------~~~~~~~~~---~~~~~~~-~~~~~~ 64 (208)
T d1tqyb1 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVT--RFDVSRY-----------PATLAGQID---DFHAPDH-IPGRLL 64 (208)
T ss_dssp EEEEEEEEEETTEESHHHHHHHHHTTCCCEEECT--TTTGGGS-----------SCCEEECCC---SCCHHHH-SCTTTG
T ss_pred EEEEcceeECCCcCCHHHHHHHHHcCCCceecCc--ccCchhc-----------ccccccccc---ccccccc-CChhHh
Confidence 8999999999999999999999999999999876 6665433 334556554 4666655 899999
Q ss_pred hcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchh-------------ccccccccccchhhHHHHHHH
Q psy616 713 ERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQ-------------DRLDQVNLTSTHNAILSARLA 779 (1152)
Q Consensus 713 ~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~a~ris 779 (1152)
+.|||++|+.+.++++||+|||+.++++...++|+++|+..+.... ....+..+++...+++++|||
T Consensus 65 ~~~~~~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia 144 (208)
T d1tqyb1 65 PQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQIS 144 (208)
T ss_dssp GGCCHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHH
T ss_pred hccccccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhh
Confidence 9999999999999999999999999999999999999987664211 123344566677889999999
Q ss_pred HHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC
Q psy616 780 YFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP 842 (1152)
Q Consensus 780 ~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~ 842 (1152)
+.|||+||+++|++|||||+.||++|+++|++| ||+|||||+|..++|..+..|+++|+||.
T Consensus 145 ~~~gl~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 145 IRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp HHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred hcccccceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999 99999999999999999999999999995
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.98 E-value=1.3e-32 Score=293.86 Aligned_cols=196 Identities=19% Similarity=0.371 Sum_probs=167.2
Q ss_pred CcEEEEeeeeccCCCCCHHHHHHHHHcCCccccccCcccccccccccCCcCCCCCccceeeeecCCCCCCCCcCCCCCHH
Q psy616 631 ELIAIIGMSGRFPAARNINEFWKILINNKDVISEIPEKIFDWKLYYENPIKSSNKINSKWYGSIPGIDEFDPLFFEISPL 710 (1152)
Q Consensus 631 ~~IaIvGm~~~~P~~~~~~~fw~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~is~~ 710 (1152)
++||||||||++|++.++++||++|.+|+++|+++|. |+...+ . +.+.....||...|.++++
T Consensus 1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~--~~~~~~-----------~----~~~~~~~~~~~~~~~~~~~ 63 (216)
T d1tqya1 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISF--FDPSPY-----------R----SQVAAEADFDPVAEGFGPR 63 (216)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCS--SCCTTS-----------S----CCEEECCCCCHHHHTCCHH
T ss_pred CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCCc--cCCCcc-----------c----ccccccccccccccccChh
Confidence 4799999999999999999999999999999999873 332211 1 1222334588888999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhc-------------------cccccccccchh
Q psy616 711 EAERMDPRQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQD-------------------RLDQVNLTSTHN 771 (1152)
Q Consensus 711 ea~~mdpq~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~-------------------~~~~~~~~~~~~ 771 (1152)
+++.|||++++++.++.|||+|||+.++++.+.++|+++|.+.+..... .......+....
T Consensus 64 ~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (216)
T d1tqya1 64 ELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVP 143 (216)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHST
T ss_pred hhcccCcchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCc
Confidence 9999999999999999999999999999999999999999876542110 111223344556
Q ss_pred hHHHHHHHHHcCCCCCcccccccchhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCC
Q psy616 772 AILSARLAYFMDLKGPVMAINTACSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPD 843 (1152)
Q Consensus 772 ~~~a~ris~~~~l~GPs~tvdtaCsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~ 843 (1152)
++++++||+.||++||+++|++||+||+.||++|+++|++|+||+|||||++..++|..+.+|++++.||+.
T Consensus 144 ~~~a~~ia~~~g~~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~~ 215 (216)
T d1tqya1 144 SVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215 (216)
T ss_dssp THHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC
T ss_pred hHHHHHHHHhcCccccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCcC
Confidence 789999999999999999999999999999999999999999999999999999999999999999999974
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.96 E-value=2.3e-28 Score=266.32 Aligned_cols=234 Identities=18% Similarity=0.204 Sum_probs=190.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||++|||+++|+.|+++|+ +|++++|+ +..+++.+++++.|.++.++++|++|+++++++++++.++||+
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 87 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 87 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 689999999999999999999999998 45666666 5557788889888999999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||... ..++.+.+.++|++++++|+.|++++.++++|+|++. +.+.||++||+++..+.+++++|+++|
T Consensus 88 iDilvnnag~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~---~~G~IVnisS~~~~~~~~~~~~Y~asK 163 (251)
T d2c07a1 88 VDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN---RYGRIINISSIVGLTGNVGQANYSSSK 163 (251)
T ss_dssp CCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH---TCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred ceeeeecccccc-ccccccccHHHHhhhheeeehhhhhhhhhcCcccccC---CCeEEEEECCHHhcCCCCCCHHHHHHH
Confidence 999999999987 7889999999999999999999999999999998764 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCC-CCCCHHHHHHHHHHHHhcCc----e
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQDK----I 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~----~ 467 (1152)
+++.+|++.++.+.. ..++++.+|.+|... +.|.....+.. ....+...+ +..+|+|...++..+++... .
T Consensus 164 aal~~ltr~lA~el~--~~gIrVN~V~PG~v~-T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG 240 (251)
T d2c07a1 164 AGVIGFTKSLAKELA--SRNITVNAIAPGFIS-SDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYING 240 (251)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-C-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHhh--hhCeEEEEEccCCEe-cccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence 999999999988765 456788888887664 55543322221 222222222 24589999999888775432 3
Q ss_pred eeeeechhh
Q psy616 468 QYLVLSGEL 476 (1152)
Q Consensus 468 ~~~v~~~~~ 476 (1152)
+.+.++|-+
T Consensus 241 ~~i~vDGG~ 249 (251)
T d2c07a1 241 RVFVIDGGL 249 (251)
T ss_dssp CEEEESTTS
T ss_pred cEEEECCCc
Confidence 566666543
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.96 E-value=5.5e-28 Score=261.43 Aligned_cols=216 Identities=17% Similarity=0.126 Sum_probs=186.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCc------EEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYST------NLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~------~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
+++|||||++|||+++|+.|+++|++ .|++++|+. ..+++.+++++.|.++.+++||++|+++++++++++.+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999987 477778874 45677888888899999999999999999999999999
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
+||+||++|||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++. +.+.||++||+++..+.++++.|
T Consensus 82 ~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~---~~G~Ii~isS~~~~~~~~~~~~Y 157 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ---HSGHIFFITSVAATKAFRHSSIY 157 (240)
T ss_dssp HTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTCHHH
T ss_pred HcCCcceeeccccccc-CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc---CCCceEEEechhhcCCCCCChHH
Confidence 9999999999999988 7899999999999999999999999999999999764 34679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++|+++.+|++.++.+.. ..++++.+|.+|.. ++.|......... -..++|+|..+.+..++..+.
T Consensus 158 ~asK~al~~lt~~la~el~--~~gIrvn~i~PG~v-~T~~~~~~~~~~~-------~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 158 CMSKFGQRGLVETMRLYAR--KCNVRITDVQPGAV-YTPMWGKVDDEMQ-------ALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHT--TTTEEEEEEEECCB-CSTTTCCCCSTTG-------GGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHHhC--cCCeEEEEeeeCcc-cCchhhhcCHhhH-------hcCCCHHHHHHHHHHHHcCCc
Confidence 9999999999999988765 45678889988755 4555433222111 134789999999998887654
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.96 E-value=3.8e-28 Score=263.33 Aligned_cols=232 Identities=16% Similarity=0.204 Sum_probs=190.9
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+++|||||++|||+++|+.|+++|+++++..+|++ ..+++.++++..|.++.+++||++|+++++++++++.++||+||
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 48999999999999999999999997766667764 45677788888899999999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
++|||||... ..++.+++.++|++++++|+.|++++.++++|+|++. +.+.||++||+++..|.++++.|+++|++
T Consensus 82 iLVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~---~~G~IVnisS~~~~~~~~~~~~Y~asKaa 157 (244)
T d1edoa_ 82 VVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK---RKGRIINIASVVGLIGNIGQANYAAAKAG 157 (244)
T ss_dssp EEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred cccccccccc-ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc---CCcEEEEEcChhhcCCCCCCHHHHHHHHH
Confidence 9999999988 7899999999999999999999999999999999764 34679999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchh-HHhhcCC-CCCCHHHHHHHHHHHHhcCc-----ee
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDF-YFKSSKQ-KVLHENDGLKLFEQLLIQDK-----IQ 468 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~-~~~~~g~-~~l~~~e~~~~l~~~l~~~~-----~~ 468 (1152)
+.+|++.++.+.. ..++++.+|.+|... +.|.....+.... ..+...+ +..+|+|...++..+..++. .|
T Consensus 158 l~~ltk~lA~el~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~ 234 (244)
T d1edoa_ 158 VIGFSKTAAREGA--SRNINVNVVCPGFIA-SDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQ 234 (244)
T ss_dssp HHHHHHHHHHHHH--TTTEEEEEEEECSBC-SHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSC
T ss_pred HHHChHHHHHHHh--hhCcEEEEEecceec-cHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCC
Confidence 9999999998865 556788889887664 5554332222211 2222222 34689999999988754443 35
Q ss_pred eeeechh
Q psy616 469 YLVLSGE 475 (1152)
Q Consensus 469 ~~v~~~~ 475 (1152)
.+.++|-
T Consensus 235 ~i~vdGG 241 (244)
T d1edoa_ 235 AFTIDGG 241 (244)
T ss_dssp EEEESTT
T ss_pred eEEeCCC
Confidence 5555553
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.96 E-value=6.4e-28 Score=262.15 Aligned_cols=232 Identities=13% Similarity=0.084 Sum_probs=182.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|++ |++..|++. ++..+.++..|.++.+++||++|+++++++++++.++||+|
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~-V~~~~~~~~-~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i 81 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGAD-IAIADLVPA-PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC 81 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCC-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCch-HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999999985 555666543 34556677889999999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+++.++|++++++|+.|++++.++++|+|++.+ .+.||++||+++..+.++++.|+++|+
T Consensus 82 DilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~G~Iv~isS~~~~~~~~~~~~Y~asKa 157 (247)
T d2ew8a1 82 DILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG---WGRIINLTSTTYWLKIEAYTHYISTKA 157 (247)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred CEEEECCCCCC-CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC---CCCccccccchhcccCcccccchhhhc
Confidence 99999999987 78999999999999999999999999999999997643 467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch-hHHhh--cCC-CCCCHHHHHHHHHHHHhcC----c
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-FYFKS--SKQ-KVLHENDGLKLFEQLLIQD----K 466 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~~~~~--~g~-~~l~~~e~~~~l~~~l~~~----~ 466 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|......... ..... ..+ +..+|+|...++..+++.. .
T Consensus 158 al~~ltk~lA~ela--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~it 234 (247)
T d2ew8a1 158 ANIGFTRALASDLG--KDGITVNAIAPSLVR-TATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFIT 234 (247)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCC-------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCC
T ss_pred cHHHHHHHHHHHhc--ccCeEEEEEeeCCCC-CccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCc
Confidence 99999999998765 456788888887654 444322111100 00000 111 2457999999988876533 2
Q ss_pred eeeeeechh
Q psy616 467 IQYLVLSGE 475 (1152)
Q Consensus 467 ~~~~v~~~~ 475 (1152)
.+.+.++|-
T Consensus 235 G~~i~vDGG 243 (247)
T d2ew8a1 235 GQTLAVDGG 243 (247)
T ss_dssp SCEEEESSS
T ss_pred CCeEEECCC
Confidence 355555554
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.95 E-value=1.3e-27 Score=261.53 Aligned_cols=236 Identities=16% Similarity=0.136 Sum_probs=192.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+. ..+++.+++++.|.++.+++||++|+++++++++++.++||
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 84 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAK-VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999984 55556653 45677888888999999999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||++|||||+.. ..++.+++.++|++++++|+.|++++.++++|+|++. .....||++||+++..+.+++..|+++
T Consensus 85 ~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~--~~g~~Iv~isS~~~~~~~~~~~~Y~as 161 (261)
T d1geea_ 85 KLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN--DIKGTVINMSSVHEKIPWPLFVHYAAS 161 (261)
T ss_dssp CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCEeeccceecC-CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccc--cccccccccccchhcccCccccccccC
Confidence 9999999999988 7889999999999999999999999999999998753 334579999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC---
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD--- 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~--- 465 (1152)
|+++.+|++.++.+.. ..++++.+|.+|... +.|..... +......+...+ +..+|+|...++..+++..
T Consensus 162 Kaal~~lt~~lA~e~~--~~gIrVN~I~PG~v~-T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~ 238 (261)
T d1geea_ 162 KGGMKLMTETLALEYA--PKGIRVNNIGPGAIN-TPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238 (261)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECSBC-SGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred CccchhhHHHHHHHhh--hhCcEEEEEeeCcCc-CHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence 9999999999998765 456788888887764 55543211 111111122222 2358999999998877543
Q ss_pred -ceeeeeechhhh
Q psy616 466 -KIQYLVLSGELE 477 (1152)
Q Consensus 466 -~~~~~v~~~~~~ 477 (1152)
..|.+.+++-+.
T Consensus 239 itG~~i~vDGG~s 251 (261)
T d1geea_ 239 VTGITLFADGGMT 251 (261)
T ss_dssp CCSCEEEESTTGG
T ss_pred CcCCeEEECCCee
Confidence 236777777664
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.95 E-value=8.3e-28 Score=261.82 Aligned_cols=233 Identities=14% Similarity=0.122 Sum_probs=187.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+. +++.+..++.+.++.+++||++|+++++++++++.++||+|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGAR-VVLADVLD--EEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH--HHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCE-EEEEECCH--HHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence 5899999999999999999999999985 66667764 33444455667889999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++.+ .+.||++||+++..+.++++.|+++|+
T Consensus 81 DilVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~---~G~II~isS~~~~~~~~~~~~Y~asKa 156 (254)
T d1hdca_ 81 DGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG---GGSIVNISSAAGLMGLALTSSYGASKW 156 (254)
T ss_dssp CEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cEEEecCcccc-ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC---CCeecccccchhcccccchhhHHHHHH
Confidence 99999999987 78999999999999999999999999999999987643 467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-cchhHHhhcCCCCC--CHHHHHHHHHHHHhcC----ce
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QTDFYFKSSKQKVL--HENDGLKLFEQLLIQD----KI 467 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~~~~~~~~g~~~l--~~~e~~~~l~~~l~~~----~~ 467 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|...... ......+...+..+ .|+|...++..+++.. ..
T Consensus 157 al~~lt~~lA~e~a--~~gIrVN~I~PG~v~-T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG 233 (254)
T d1hdca_ 157 GVRGLSKLAAVELG--TDRIRVNSVHPGMTY-TPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTG 233 (254)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhC--CCceEEEEeeeCccc-CccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCC
Confidence 99999999998754 456788888887664 444322111 11111222222223 5899999998887543 23
Q ss_pred eeeeechhhh
Q psy616 468 QYLVLSGELE 477 (1152)
Q Consensus 468 ~~~v~~~~~~ 477 (1152)
+.+.+++-|.
T Consensus 234 ~~i~vDGG~t 243 (254)
T d1hdca_ 234 AELAVDGGWT 243 (254)
T ss_dssp CEEEESTTTT
T ss_pred ceEEeCCCcc
Confidence 6777777663
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=1.1e-27 Score=261.48 Aligned_cols=233 Identities=12% Similarity=0.098 Sum_probs=189.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..+++.+++++.|.++.+++||++|+++++++++++.++||+
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~ 88 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999985 4555565 5567788889999999999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||+.. ..++ +++.++|++++++|+.|++++.+++.|+|++.. .+.||++||+++..+.++++.|+++|
T Consensus 89 iDilvnnAG~~~-~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~g~Ii~isS~~~~~~~~~~~~Y~asK 163 (255)
T d1fmca_ 89 VDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG---GGVILTITSMAAENKNINMTSYASSK 163 (255)
T ss_dssp CCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred CCEeeeCCcCCC-CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc---ccccccccccchhccccccccchhHH
Confidence 999999999877 5555 899999999999999999999999999987653 45699999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--cccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC----c
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD----K 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~ 466 (1152)
+++.+|++.++.+.. ..++++.+|.+|... +.|.... .+......+...+ +..+|+|...++..+++.. .
T Consensus 164 aal~~lt~~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~it 240 (255)
T d1fmca_ 164 AAASHLVRNMAFDLG--EKNIRVNGIAPGAIL-TDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVS 240 (255)
T ss_dssp HHHHHHHHHHHHHHH--TTTEEEEEEEECSBC-SHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhC--ccCeEEEEeeeCcCc-ChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence 999999999998754 456788899888765 3332221 1212222333322 2457999999998877543 2
Q ss_pred eeeeeechhh
Q psy616 467 IQYLVLSGEL 476 (1152)
Q Consensus 467 ~~~~v~~~~~ 476 (1152)
.+.+.++|-+
T Consensus 241 G~~i~vDGG~ 250 (255)
T d1fmca_ 241 GQILTVSGGG 250 (255)
T ss_dssp SCEEEESTTS
T ss_pred CCEEEECcCc
Confidence 3566666654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=8e-28 Score=260.64 Aligned_cols=231 Identities=14% Similarity=0.189 Sum_probs=186.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|++ ..+++.+++ +.++.+++||++|+++++++++++.++||+
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~-Vv~~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAK-VIGTATSENGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAEFGE 78 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence 5899999999999999999999999985 55566663 334444444 567889999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||... ..++.+.+.++|++++++|+.|++++.|+++|+|++.+ .+.||++||+++..|.++++.|+++|
T Consensus 79 iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~G~II~isS~~~~~~~~~~~~Y~asK 154 (243)
T d1q7ba_ 79 VDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR---HGRIITIGSVVGTMGNGGQANYAAAK 154 (243)
T ss_dssp CSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred cceehhhhhhcc-ccccccccccccccccceeechhhhhHHHHHHHHHHcC---CCEeeeecchhhcCCCCCCHHHHHHH
Confidence 999999999988 78999999999999999999999999999999997643 46799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCC-CCCCHHHHHHHHHHHHhcC----ce
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQD----KI 467 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~~ 467 (1152)
+++.+|++.++.+.. ..++++.+|.+|... +.|........ ....+...+ +..+|+|...++..+++.. ..
T Consensus 155 aal~~lt~~lA~ela--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG 231 (243)
T d1q7ba_ 155 AGLIGFSKSLAREVA--SRGITVNVVAPGFIE-TDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITG 231 (243)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHhC--ccCeEEEEEecceEe-chhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence 999999999988765 456788899888764 45543222211 122222222 2458999999998888543 23
Q ss_pred eeeeechhh
Q psy616 468 QYLVLSGEL 476 (1152)
Q Consensus 468 ~~~v~~~~~ 476 (1152)
|.+.++|-+
T Consensus 232 q~i~vdGG~ 240 (243)
T d1q7ba_ 232 ETLHVNGGM 240 (243)
T ss_dssp CEEEESTTS
T ss_pred CeEEECCCe
Confidence 566666543
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.95 E-value=7.5e-28 Score=263.52 Aligned_cols=235 Identities=14% Similarity=0.145 Sum_probs=187.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.+|++|||||++|||+++|+.|+++|++ |++++|+ +..+++.+++++.|.++.+++||++|+++++++++++.++||+
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 79 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLR-VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 79 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 3789999999999999999999999985 5555665 5567788889988999999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||+.. ..++.+++.++|++++++|+.|++++.++++|+|...+ ...+.||++||+++..|.++++.|+++|
T Consensus 80 iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~-~~~g~Ii~i~S~~~~~~~~~~~~Y~asK 157 (257)
T d2rhca1 80 VDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASK 157 (257)
T ss_dssp CSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHH-HTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCEEEecccccC-CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHh-cCCcccccccccccccccccchhHHHHH
Confidence 999999999988 78999999999999999999999999999999742111 2346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhhcCC-CCCCHHHHHHHHHH
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQ-KVLHENDGLKLFEQ 460 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~-~~l~~~e~~~~l~~ 460 (1152)
+++.+|++.++.+.. ..++++.+|.+|.. ++.|.... ++..+...+...+ +..+|+|...++..
T Consensus 158 aal~~ltk~lA~el~--~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~f 234 (257)
T d2rhca1 158 HGVVGFTKALGLELA--RTGITVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY 234 (257)
T ss_dssp HHHHHHHHHHHHHTT--TSEEEEEEEEECSB-CSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEeeCCC-CCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 999999999998865 45678888988865 44443211 0111111222222 24578999988887
Q ss_pred HHhcCc----eeeeeechh
Q psy616 461 LLIQDK----IQYLVLSGE 475 (1152)
Q Consensus 461 ~l~~~~----~~~~v~~~~ 475 (1152)
+++... .|.+.++|-
T Consensus 235 L~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 235 LIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp HTSGGGTTCCSCEEEESTT
T ss_pred HhCchhcCCcCceEEECcC
Confidence 775332 255555554
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.95 E-value=2.2e-27 Score=258.49 Aligned_cols=236 Identities=15% Similarity=0.173 Sum_probs=186.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..+++.+++. .+.++.+++||++|+++++++++++.++||+
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 82 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAK-VMITGRHSDVGEKAAKSVG-TPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhC-CCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999999985 5566666 44455555664 3568999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||+.. ..++.+++.++|++++++|+.|++++.++++|+|++. ...+.||++||+++..+.+++..|+++|
T Consensus 83 iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~--~~gg~Ii~isS~~~~~~~~~~~~Y~asK 159 (251)
T d1zk4a1 83 VSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK--GLGASIINMSSIEGFVGDPSLGAYNASK 159 (251)
T ss_dssp CCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS--SSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred ceEEEecccccc-ccchhcccccchhhhccccccccchhHHHHHHHHHhc--CCCCceEeeeccceeccCCCchhHHHHH
Confidence 999999999988 7899999999999999999999999999999998543 2335799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhH--HhhcCC-CCCCHHHHHHHHHHHHhcCc----
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFY--FKSSKQ-KVLHENDGLKLFEQLLIQDK---- 466 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~--~~~~g~-~~l~~~e~~~~l~~~l~~~~---- 466 (1152)
+++.+|++.++.+...+..++++.+|.+|... +.|........... .....+ +..+|+|...++..+++...
T Consensus 160 aal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~it 238 (251)
T d1zk4a1 160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIK-TPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFAT 238 (251)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBC-CHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHhcchHHHHHHHhcCCCcEEEEEEeCCCCC-ChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCc
Confidence 99999999987663223457799999888764 45543322111111 111111 23589999999988775432
Q ss_pred eeeeeechhh
Q psy616 467 IQYLVLSGEL 476 (1152)
Q Consensus 467 ~~~~v~~~~~ 476 (1152)
.+.+.++|-|
T Consensus 239 G~~i~vDGG~ 248 (251)
T d1zk4a1 239 GSEFVVDGGY 248 (251)
T ss_dssp SCEEEESTTG
T ss_pred CcEEEECccc
Confidence 3566666655
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.95 E-value=3.1e-27 Score=258.20 Aligned_cols=232 Identities=14% Similarity=0.103 Sum_probs=187.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
|++|||||++|||+++|+.|+++|++ |++++|+ +..+++.+++++.|.++.+++||++|+++++++++++.++||+||
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFA-VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 78999999999999999999999985 5555665 555778888988899999999999999999999999999999999
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
++|||||+.. ..++.+++.++|++++++|+.|++++.++++|+|.+. ...+.||++||+++..+.++++.|+++|++
T Consensus 81 ilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~--~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa 157 (255)
T d1gega_ 81 VIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE--GHGGKIINACSQAGHVGNPELAVYSSSKFA 157 (255)
T ss_dssp EEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred EEEecccccc-cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhh--ccccccccccchhhcccCcccccchhCHHH
Confidence 9999999987 7899999999999999999999999999999988654 345679999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc------------cchhHHhhcCC-CCCCHHHHHHHHHHHH
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE------------QTDFYFKSSKQ-KVLHENDGLKLFEQLL 462 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~------------~~~~~~~~~g~-~~l~~~e~~~~l~~~l 462 (1152)
+.+|++.++.+.. ..++++.+|.+|... +.|...... ......+...+ +..+|+|...++..++
T Consensus 158 l~~ltk~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~ 234 (255)
T d1gega_ 158 VRGLTQTAARDLA--PLGITVNGYCPGIVK-TPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA 234 (255)
T ss_dssp HHHHHHHHHHHHG--GGTEEEEEEEECSBS-SHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHhh--hhCcEEEEEecCccc-ChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999988754 456788888888663 444221110 01111222222 2457999999988877
Q ss_pred hcCc----eeeeeechh
Q psy616 463 IQDK----IQYLVLSGE 475 (1152)
Q Consensus 463 ~~~~----~~~~v~~~~ 475 (1152)
+... .+.+.++|-
T Consensus 235 S~~a~~itG~~i~vDGG 251 (255)
T d1gega_ 235 SPDSDYMTGQSLLIDGG 251 (255)
T ss_dssp SGGGTTCCSCEEEESSS
T ss_pred CchhCCccCcEEEecCC
Confidence 5332 255555543
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.95 E-value=2.7e-27 Score=256.14 Aligned_cols=228 Identities=13% Similarity=0.127 Sum_probs=185.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|++ +++.+..++.+.++.+++||++|+++++++++++.++||+|
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~-V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 81 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGAK-VVFGDILD--EEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL 81 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCH--HHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCH--HHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 5899999999999999999999999995 66666764 22222333446678999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+++.++|++++++|+.|++++.+.+.|+|++. ..+.||++||+++..+.+++..|+++|+
T Consensus 82 dilinnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~---~~G~Ii~isS~~~~~~~~~~~~Y~asKa 157 (244)
T d1nffa_ 82 HVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA---GRGSIINISSIEGLAGTVACHGYTATKF 157 (244)
T ss_dssp CEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred eEEEECCcccC-CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc---CcceEEeccccccccccccccchhhHHH
Confidence 99999999987 7899999999999999999999999999999998764 3467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC----ceee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD----KIQY 469 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~~~~ 469 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|.....+.. .+.-+ +..+|+|..+++..++... ..|.
T Consensus 158 al~~ltk~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~----~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~ 230 (244)
T d1nffa_ 158 AVRGLTKSTALELG--PSGIRVNSIHPGLVK-TPMTDWVPEDI----FQTALGRAAEPVEVSNLVVYLASDESSYSTGAE 230 (244)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCBC-SGGGTTSCTTC----SCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHhc--ccCEEEEEEeeCCcc-ChhHhhhhHHH----HhccccCCCCHHHHHHHHHHHhChhhCCCcCCE
Confidence 99999999998865 456788889888664 45543222211 11112 3568999999998887543 2356
Q ss_pred eeechhh
Q psy616 470 LVLSGEL 476 (1152)
Q Consensus 470 ~v~~~~~ 476 (1152)
+.+++-+
T Consensus 231 i~vDGG~ 237 (244)
T d1nffa_ 231 FVVDGGT 237 (244)
T ss_dssp EEESTTG
T ss_pred EEECCCe
Confidence 6666654
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.95 E-value=3.2e-27 Score=257.09 Aligned_cols=234 Identities=18% Similarity=0.195 Sum_probs=186.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l-~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..++..+++ +..|.++.+++||++|+++++++++++.++||
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCS-VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 82 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999985 5556665 4445566665 45588899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcc-ccCCCCChhhhH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSA-ILGDFGSCDYAM 391 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~-~~g~~g~~~Yaa 391 (1152)
+||++|||||+.. ..++.+++.++|++++++|+.|++++.|+++|+|++ ...+.||++||+.+ ..+.+++..|++
T Consensus 83 ~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~G~Ii~i~S~~~~~~~~~~~~~Y~a 158 (251)
T d1vl8a_ 83 KLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRE---SDNPSIINIGSLTVEEVTMPNISAYAA 158 (251)
T ss_dssp CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---CSSCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred CCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccc---cccccccccccchhccccCccccchHH
Confidence 9999999999987 789999999999999999999999999999999754 34567999999876 457789999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc---cccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC--
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN---NEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD-- 465 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~---~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~-- 465 (1152)
+|+++.+|++.++.+.. ..++++.+|.+|... +.|.... .+......+...+ +..+|+|..+++..+++..
T Consensus 159 sKaal~~lt~~lA~e~~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~ 235 (251)
T d1vl8a_ 159 SKGGVASLTKALAKEWG--RYGIRVNVIAPGWYR-TKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAK 235 (251)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-STTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred HHHhHHHHHHHHHHHhc--ccCeEEEEEeeCccc-CHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhC
Confidence 99999999999998765 456788889888774 4553221 1111222222222 3458999999988877543
Q ss_pred --ceeeeeechhh
Q psy616 466 --KIQYLVLSGEL 476 (1152)
Q Consensus 466 --~~~~~v~~~~~ 476 (1152)
..+.+.++|-|
T Consensus 236 ~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 236 YVTGQIIFVDGGW 248 (251)
T ss_dssp TCCSCEEEESTTG
T ss_pred CCcCcEEEeCcCe
Confidence 23666667655
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.95 E-value=2.3e-27 Score=259.85 Aligned_cols=186 Identities=16% Similarity=0.211 Sum_probs=166.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..+++.+++++.|.++.+++||++|+++++++++++.++||+
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTA-IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 82 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999985 5556665 4567788888888999999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||+.....++.+++.++|++++++|+.|++++.+++.|+|++. ..+.||++||+++..+.++++.|+++|
T Consensus 83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~---~~G~II~isS~~~~~~~~~~~~Y~asK 159 (260)
T d1zema1 83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ---NYGRIVNTASMAGVKGPPNMAAYGTSK 159 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh---cCCCCCeeechhhccCCcchHHHHHHH
Confidence 99999999987535789999999999999999999999999999998764 346799999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
+++.+|++.++.+.. ..++++.+|++|....
T Consensus 160 aal~~ltk~lA~el~--~~gIrVN~I~PG~v~T 190 (260)
T d1zema1 160 GAIIALTETAALDLA--PYNIRVNAISPGYMGP 190 (260)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEECSBCS
T ss_pred HHHHHHHHHHHHHhh--hhCCEEEEeccCcccC
Confidence 999999999998865 4567888998887653
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.95 E-value=3.5e-27 Score=257.83 Aligned_cols=235 Identities=17% Similarity=0.130 Sum_probs=185.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..++..+++... +.++.+++||++|+++++++++++.++|
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAK-LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999985 5566665 4445566666543 5689999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|+||+||||||+.....++.+++.++|++++++|+.|++++.|++.|+|++. ..+.||++||+++..+.++++.|++
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~---~~G~Ii~isS~~~~~~~~~~~~Y~a 158 (258)
T d1iy8a_ 82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ---GSGMVVNTASVGGIRGIGNQSGYAA 158 (258)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSBCSSBHHHHH
T ss_pred CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh---cCCCCcccccHhhccCCCCchHHHH
Confidence 9999999999987536789999999999999999999999999999998764 3467999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc--------cc-cchhHHhhcCC-CCCCHHHHHHHHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN--------NE-QTDFYFKSSKQ-KVLHENDGLKLFEQL 461 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~--------~~-~~~~~~~~~g~-~~l~~~e~~~~l~~~ 461 (1152)
+|+++.+|++.++.+.. ..++++.+|.+|... +.|.... .. ..+...+...+ +..+|+|...++..+
T Consensus 159 sKaal~~lt~~lA~el~--~~gIrVN~i~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL 235 (258)
T d1iy8a_ 159 AKHGVVGLTRNSAVEYG--RYGIRINAIAPGAIW-TPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFL 235 (258)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTCEEEEEEECSBC-SHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC--ccCceEEEEeeCccc-CHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999999998765 456788888887664 4442111 00 01111112222 245899999888877
Q ss_pred HhcC----ceeeeeechhh
Q psy616 462 LIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 462 l~~~----~~~~~v~~~~~ 476 (1152)
++.. ..+.+.++|-+
T Consensus 236 ~S~~s~~itG~~i~VDGG~ 254 (258)
T d1iy8a_ 236 LSDDASYVNATVVPIDGGQ 254 (258)
T ss_dssp TSGGGTTCCSCEEEESTTT
T ss_pred hCchhcCCcCceEEcCcch
Confidence 7533 22556666554
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.95 E-value=5.2e-27 Score=257.24 Aligned_cols=234 Identities=13% Similarity=0.117 Sum_probs=186.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK--LNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~--~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
++|++|||||++|||+++|+.|+++|+ +|++++|++ ..++..+++. ..|.++.+++||++|+++++++++++.++|
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 689999999999999999999999998 566666653 3455556664 347899999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|+||+||||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++.. .+.||++||+++..+.++++.|++
T Consensus 82 G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~---~G~Iv~isS~~~~~~~~~~~~Y~a 157 (260)
T d1x1ta1 82 GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG---FGRIINIASAHGLVASANKSAYVA 157 (260)
T ss_dssp SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTSCCTTCHHHHH
T ss_pred CCCcEEEeeccccc-CCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC---CceEeecccccceeccCCcchhhh
Confidence 99999999999988 78999999999999999999999999999999998643 467999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-------------cchhHHhhcCC-CCCCHHHHHHH
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-------------QTDFYFKSSKQ-KVLHENDGLKL 457 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-------------~~~~~~~~~g~-~~l~~~e~~~~ 457 (1152)
+|+++.+|++.++.+.. ..++++.+|.+|... +.|...... ......+...+ +..+|+|..++
T Consensus 158 sKaal~~lt~~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~ 234 (260)
T d1x1ta1 158 AKHGVVGFTKVTALETA--GQGITANAICPGWVR-TPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT 234 (260)
T ss_dssp HHHHHHHHHHHHHHHHT--TTTEEEEEEEECCBC-C------------------------CHHHHCTTCCCBCHHHHHHH
T ss_pred hhhhHHHhHHHHHHHhc--hhCcEEEEEecCCCC-ChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 99999999999998864 557788899888653 444321110 00111122222 34589999999
Q ss_pred HHHHHhcC----ceeeeeechhh
Q psy616 458 FEQLLIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 458 l~~~l~~~----~~~~~v~~~~~ 476 (1152)
+..+++.. ..|.+.++|-|
T Consensus 235 v~fL~S~~a~~itG~~i~vDGG~ 257 (260)
T d1x1ta1 235 AVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhChhhCCCcCCEEEECcch
Confidence 88877543 23666666655
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.95 E-value=7.8e-27 Score=253.46 Aligned_cols=229 Identities=11% Similarity=0.133 Sum_probs=181.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|+ +|++++|++...+..+++ + ..+++||++|+++++++++++.++||+|
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 77 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAI---G--GAFFQVDLEDERERVRFVEEAAYALGRV 77 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHH---T--CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence 689999999999999999999999998 566666765444444333 3 3568999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+++.|+|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.++++.|+++|+
T Consensus 78 DiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~---~~G~Ii~isS~~~~~~~~~~~~Y~asKa 153 (248)
T d2d1ya1 78 DVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV---GGGAIVNVASVQGLFAEQENAAYNASKG 153 (248)
T ss_dssp CEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT---TCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred CeEEEeCcCCC-CCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc---ccccccccccccccccccccchhHHHHH
Confidence 99999999988 7899999999999999999999999999999998653 3568999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc-------ccccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC-
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-------NNEQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD- 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-------~~~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~- 465 (1152)
++.+|++.++.+.. ..++++.+|.+|.... .|... .........+...+ +..+|+|...++..++...
T Consensus 154 al~~ltk~lA~el~--~~gIrVN~I~PG~v~T-~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s 230 (248)
T d2d1ya1 154 GLVNLTRSLALDLA--PLRIRVNAVAPGAIAT-EAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKA 230 (248)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBCC-HHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHhh--hhCcEEEEEeeCCCCC-chHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999988765 4567888998887653 33211 01111112222222 2347999999988877533
Q ss_pred ---ceeeeeechhh
Q psy616 466 ---KIQYLVLSGEL 476 (1152)
Q Consensus 466 ---~~~~~v~~~~~ 476 (1152)
..|.+.++|-+
T Consensus 231 ~~itG~~i~vDGG~ 244 (248)
T d2d1ya1 231 SFITGAILPVDGGM 244 (248)
T ss_dssp TTCCSCEEEESTTG
T ss_pred cCCCCcEEEcCcCc
Confidence 23566666655
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.95 E-value=8.4e-27 Score=255.11 Aligned_cols=234 Identities=14% Similarity=0.097 Sum_probs=190.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC-
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG- 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G- 312 (1152)
++|++|||||++|||+++|+.|+++|++ |++.+|+ +..+++.+++++.+.++.+++||++|+++++++++++.++|+
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~ 85 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGAS-VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 85 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999985 5555665 556778888888899999999999999999999999999987
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||++|||||+.. ..++.+++.|+|++++++|+.|++++.+++.|+|++. ..+.||++||+++..+.++++.|+++
T Consensus 86 ~idilvnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~---~~G~Ii~isS~~~~~~~~~~~~Y~as 161 (259)
T d2ae2a_ 86 KLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS---ERGNVVFISSVSGALAVPYEAVYGAT 161 (259)
T ss_dssp CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---SSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CceEEEECCceec-cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh---cccccccccccccccccccccchHHH
Confidence 8999999999987 7889999999999999999999999999999998754 45679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc------ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN------EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~------~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
|+++.+|++.++.+.. ..++++.+|.+|... +.|..... +..........+ +..+|+|..+++..++...
T Consensus 162 Kaal~~lt~~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~ 238 (259)
T d2ae2a_ 162 KGAMDQLTRCLAFEWA--KDNIRVNGVGPGVIA-TSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA 238 (259)
T ss_dssp HHHHHHHHHHHHHHTG--GGTEEEEEEEECSBC-SHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhC--cCceEEEEeeeCccc-CHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 9999999999998754 456788899888764 33321111 011112222222 3457999999988877543
Q ss_pred ----ceeeeeechhh
Q psy616 466 ----KIQYLVLSGEL 476 (1152)
Q Consensus 466 ----~~~~~v~~~~~ 476 (1152)
..|.+.+++-+
T Consensus 239 s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 239 ASYVTGQIIYVDGGL 253 (259)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hCCCcCcEEEECCCe
Confidence 23666666654
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.9e-27 Score=255.97 Aligned_cols=220 Identities=15% Similarity=0.106 Sum_probs=184.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.||++|||||++|||+++|+.|+++|++ |++++|+ +..+++.++++..|.++.++.||++|+++++++++++.+++|+
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~~-V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~ 84 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 84 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999985 5556665 5567788889889999999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
+|++|||||+.. ...+.+.+.++|++++++|+.|++++.++++|+|++. +.++||++||+++..|.++++.|+++|
T Consensus 85 idilinnag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---~~G~Iv~isS~~~~~~~~~~~~Y~asK 160 (244)
T d1yb1a_ 85 VSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN---NHGHIVTVASAAGHVSVPFLLAYCSSK 160 (244)
T ss_dssp CSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred CceeEeeccccc-cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc---CCceEEEeecchhcCCCCCcHHHHHHH
Confidence 999999999988 7788899999999999999999999999999998764 357899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccc-cCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCcee
Q psy616 394 RFQTVYAKYLNNKNIY-KKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQ 468 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~-~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~ 468 (1152)
+++.+|++.++.+... ...++++.+|.+|.. +++|..... ... ...++|++.++.+...+..+...
T Consensus 161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v-~T~~~~~~~-------~~~-~~~~~pe~va~~i~~~~~~~~~~ 227 (244)
T d1yb1a_ 161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFV-NTGFIKNPS-------TSL-GPTLEPEEVVNRLMHGILTEQKM 227 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHH-HHCSTTCTH-------HHH-CCCCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCC-CChhhhCcC-------ccc-cCCCCHHHHHHHHHHHHhcCCcE
Confidence 9999999999876432 123568889988754 566653211 111 23578999998888777665543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.95 E-value=4.5e-27 Score=256.24 Aligned_cols=232 Identities=12% Similarity=0.123 Sum_probs=183.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|++ ..+++.+ +.+.+..+++||++|+++++++++++.++||+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 80 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAK-VAFSDINEAAGQQLAA---ELGERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHH---HHCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHH---HhCCCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999999985 66666764 3333333 34678899999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||++|||||+.. ..++.+.+.++|++++++|+.|++++.++++|+|++ ..+.||++||+++..+.++++.|+++|
T Consensus 81 iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~----~~G~Iv~isS~~~~~~~~~~~~Y~asK 155 (253)
T d1hxha_ 81 LNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE----TGGSIINMASVSSWLPIEQYAGYSASK 155 (253)
T ss_dssp CCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT----TCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCeEEecccccC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh----cCCceecccchhhhcCccccccccchh
Confidence 999999999987 788999999999999999999999999999999853 247899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-c-ccchhHH-hhcCC----CCCCHHHHHHHHHHHHhcC-
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-N-EQTDFYF-KSSKQ----KVLHENDGLKLFEQLLIQD- 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-~-~~~~~~~-~~~g~----~~l~~~e~~~~l~~~l~~~- 465 (1152)
+++.+|++.++.+....+.++++.+|.+|... +.|.... . ...+... +...+ +..+|+|...++..+++..
T Consensus 156 aal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s 234 (253)
T d1hxha_ 156 AAVSALTRAAALSCRKQGYAIRVNSIHPDGIY-TPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES 234 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEEESEEC-CHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEEEEeECCCc-CHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhh
Confidence 99999999998775444567899999988775 4432111 1 1111111 11111 3457999999998887543
Q ss_pred ---ceeeeeechhh
Q psy616 466 ---KIQYLVLSGEL 476 (1152)
Q Consensus 466 ---~~~~~v~~~~~ 476 (1152)
..|.+.+++-+
T Consensus 235 ~~itG~~i~VDGG~ 248 (253)
T d1hxha_ 235 SVMSGSELHADNSI 248 (253)
T ss_dssp TTCCSCEEEESSSC
T ss_pred CCCcCcEEEECccH
Confidence 23556666543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=6.2e-27 Score=256.04 Aligned_cols=234 Identities=13% Similarity=0.082 Sum_probs=169.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-C
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-G 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-G 312 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..++..++++..+.++.++.||++|+++++++++++.++| |
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~-V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 85 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAV-IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 85 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999985 5556666 55677888888888899999999999999999999999998 7
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||++|||||+.. ..++.+++.++|++++++|+.|++++.+++.|+|++. ..+.||++||+++..+.+++..|+++
T Consensus 86 ~idilvnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~---~~G~Iv~isS~~~~~~~~~~~~Y~as 161 (259)
T d1xq1a_ 86 KLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS---GCGNIIFMSSIAGVVSASVGSIYSAT 161 (259)
T ss_dssp CCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---SSCEEEEEC----------CCHHHHH
T ss_pred CcccccccccccC-CCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc---cccccccccccccccccccccccccc
Confidence 9999999999988 7889999999999999999999999999999998764 34679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc--ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC----
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN--EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD---- 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~--~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~---- 465 (1152)
|+++.+|++.++.+.. ..++++.+|.+|... +.|..... +......+...+ +..+|+|...++..++...
T Consensus 162 Kaal~~lt~~lA~e~~--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~i 238 (259)
T d1xq1a_ 162 KGALNQLARNLACEWA--SDGIRANAVAPAVIA-TPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYI 238 (259)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTTC
T ss_pred ccchhhhhHHHHHHhc--ccCeEEEEeccCccc-CHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence 9999999999988765 456788899888664 44533211 111111111112 2357999999988877433
Q ss_pred ceeeeeechhh
Q psy616 466 KIQYLVLSGEL 476 (1152)
Q Consensus 466 ~~~~~v~~~~~ 476 (1152)
..+.+.++|-+
T Consensus 239 TG~~i~vDGG~ 249 (259)
T d1xq1a_ 239 TGQTICVDGGL 249 (259)
T ss_dssp CSCEEECCCCE
T ss_pred cCcEEEeCCCE
Confidence 23556665543
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.8e-26 Score=250.68 Aligned_cols=231 Identities=16% Similarity=0.118 Sum_probs=181.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|+ +|++++|++ +..+++.+...++.+++||++|+++++++++++.++||+|
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~---~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDE---SGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRL 80 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCH---HHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCH---HHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 589999999999999999999999998 566666663 2334444445678999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.....++.+.+.++|++++++|+.|++++.++++|+|++. .+.||++||+++..+.+++..|+++|+
T Consensus 81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~----~G~Ii~isS~~~~~~~~~~~~Y~asKa 156 (250)
T d1ydea1 81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS----QGNVINISSLVGAIGQAQAVPYVATKG 156 (250)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC----CCCCcccccccccccccCcchhHHHHh
Confidence 9999999986535678899999999999999999999999999999753 267999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc----ccc---cchhHHhhcCC-CCCCHHHHHHHHHHHHhcC-
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG----NNE---QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD- 465 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~----~~~---~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~- 465 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|... ... ..........+ +..+|+|..+++..++...
T Consensus 157 al~~lt~~lA~e~a--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sda~ 233 (250)
T d1ydea1 157 AVTAMTKALALDES--PYGVRVNCISPGNIW-TPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEAN 233 (250)
T ss_dssp HHHHHHHHHHHHHG--GGTCEEEEEEECSBC-CHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHhc--ccCeEEEEEeeCCCC-ChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccC
Confidence 99999999998865 456788888887663 444211 111 11111222222 3468999999988876531
Q ss_pred --ceeeeeechhh
Q psy616 466 --KIQYLVLSGEL 476 (1152)
Q Consensus 466 --~~~~~v~~~~~ 476 (1152)
..|.+.+++-+
T Consensus 234 ~itG~~i~vDGG~ 246 (250)
T d1ydea1 234 FCTGIELLVTGGA 246 (250)
T ss_dssp TCCSCEEEESTTT
T ss_pred CCcCCeEEECCCc
Confidence 22555555543
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.4e-26 Score=251.22 Aligned_cols=228 Identities=12% Similarity=0.086 Sum_probs=183.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCC--CcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFN--NKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g--~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
++|++|||||++|||+++|+.|+++|++ |+++.|+ +..+++.+++++.+ .++.+++||++|+++++++++++.++|
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~ 87 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLK-VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 87 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999985 5556666 45577788888765 578999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC--CCCChhh
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG--DFGSCDY 389 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g--~~g~~~Y 389 (1152)
|+||++|||||... ..++.+.+.++|++++++|+.|++++.+++.|.|++.. ...++||++||+++..+ ..+...|
T Consensus 88 g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~-~~~g~Ii~isS~~~~~~~p~~~~~~Y 165 (257)
T d1xg5a_ 88 SGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRVLPLSVTHFY 165 (257)
T ss_dssp CCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred CCCCEEEecccccC-CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhc-cCCCceEEEechHhcCCCCCcccHHH
Confidence 99999999999987 78999999999999999999999999999999987543 23578999999998754 5667889
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-cchhHHh-hcCCCCCCHHHHHHHHHHHHhcCc
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-QTDFYFK-SSKQKVLHENDGLKLFEQLLIQDK 466 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-~~~~~~~-~~g~~~l~~~e~~~~l~~~l~~~~ 466 (1152)
+++|+++.+|+++++.+....+.++++.+|.+|.... .|...... ..+.... ....+.++|+|..+++..+++.+.
T Consensus 166 ~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t-~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 166 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVET-QFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCS-SHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCC-hhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChh
Confidence 9999999999999987643335678999999887753 33221111 1111222 222346789999999998887653
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.94 E-value=2e-26 Score=251.67 Aligned_cols=231 Identities=15% Similarity=0.144 Sum_probs=180.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|+ +|++++|+. +.+.+..++.+.++.+++||++|+++++++++++.++||+|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~--~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 80 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINL--EAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSI 80 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCH--HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCH--HHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence 589999999999999999999999998 566666653 22223334447889999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+++.++|++++++|+.|++++.+++.|.|.+. ...+.||++||+++..+.++++.|+++|+
T Consensus 81 DilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~--~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 157 (256)
T d1k2wa_ 81 DILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAG--GRGGKIINMASQAGRRGEALVGVYCATKA 157 (256)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cEEEeeccccc-ccccccCCHHHHHhhhceeeeccccchhhccchhHHh--ccCCccccccchhhccccccccchhhhhh
Confidence 99999999987 7899999999999999999999999999999987543 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc------------cccchhHHhhcCC-CCCCHHHHHHHHHHH
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN------------NEQTDFYFKSSKQ-KVLHENDGLKLFEQL 461 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~------------~~~~~~~~~~~g~-~~l~~~e~~~~l~~~ 461 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|.... .+......+...+ +..+|+|...++..+
T Consensus 158 al~~lt~~lA~el~--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL 234 (256)
T d1k2wa_ 158 AVISLTQSAGLNLI--RHGINVNAIAPGVVD-GEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFL 234 (256)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCBC-CTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--ccCeEEEEEecCCCC-chhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999998765 456788888887554 4332111 0111111222222 345899999888876
Q ss_pred HhcCc----eeeeeech
Q psy616 462 LIQDK----IQYLVLSG 474 (1152)
Q Consensus 462 l~~~~----~~~~v~~~ 474 (1152)
+.... .|.+.++|
T Consensus 235 ~S~~a~~iTG~~i~vDG 251 (256)
T d1k2wa_ 235 ATPEADYIVAQTYNVDG 251 (256)
T ss_dssp TSGGGTTCCSCEEEEST
T ss_pred hCchhCCccCceEEECc
Confidence 64322 34555544
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.94 E-value=2.3e-26 Score=247.99 Aligned_cols=223 Identities=14% Similarity=0.183 Sum_probs=170.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+|++|||||++|||+++|+.|+++|++ |+++.|+.. ...++..++||++|+++++++++++.++||+|
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~-V~~~~r~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 74 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHK-VAVTHRGSG----------APKGLFGVEVDVTDSDAVDRAFTAVEEHQGPV 74 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSSC----------CCTTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCcc----------hhcCceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 6899999999999999999999999985 555566532 12346789999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+.+.|+|++++++|+.|++++.++++|+|++. +.+.||++||+++..+.+++..|+++|+
T Consensus 75 DiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~---~~g~Iv~isS~~~~~~~~~~~~Y~asKa 150 (237)
T d1uzma1 75 EVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN---KFGRMIFIGSVSGLWGIGNQANYAASKA 150 (237)
T ss_dssp SEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred eEEEeeecccc-cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc---CCCceEEEcchhhccCCcccHHHHHHHH
Confidence 99999999987 7899999999999999999999999999999998764 3467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch-hHHhhcCC-CCCCHHHHHHHHHHHHhcCc----ee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD-FYFKSSKQ-KVLHENDGLKLFEQLLIQDK----IQ 468 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~-~~~~~~g~-~~l~~~e~~~~l~~~l~~~~----~~ 468 (1152)
++.+|++.++.+.. ..++++.+|.+|.. ++.|.....+... ...+...+ +..+|+|...++..++.... .+
T Consensus 151 al~~lt~~lA~e~~--~~gIrVN~I~PG~v-~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~ 227 (237)
T d1uzma1 151 GVIGMARSIARELS--KANVTANVVAPGYI-DTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGA 227 (237)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSB-CCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHhhhh--cCCceeeeeeeCcC-CChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence 99999999988755 45678888888766 4555433222211 12222222 34689999999888775432 35
Q ss_pred eeeechh
Q psy616 469 YLVLSGE 475 (1152)
Q Consensus 469 ~~v~~~~ 475 (1152)
.+.++|-
T Consensus 228 ~i~vdGG 234 (237)
T d1uzma1 228 VIPVDGG 234 (237)
T ss_dssp EEEESTT
T ss_pred eEEECCC
Confidence 5655554
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=5.3e-26 Score=246.06 Aligned_cols=229 Identities=16% Similarity=0.184 Sum_probs=177.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|++. .+.+..+.. ++.+++||++|+++++++++++.++||+|
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~-V~~~~r~~~--~l~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 78 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGAR-LVACDIEEG--PLREAAEAV--GAHPVVMDVADPASVERGFAEALAHLGRL 78 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHH--HHHHHHHTT--TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHH--HHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 5899999999999999999999999984 666667632 222222233 35678999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+++.++|++++++|+.|++++.|+++|+|++ ...+.++++|| ++..+.+++..|+++|+
T Consensus 79 DilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~---~~~~~i~~~ss-~~~~~~~~~~~Y~asKa 153 (242)
T d1ulsa_ 79 DGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMRE---KNPGSIVLTAS-RVYLGNLGQANYAASMA 153 (242)
T ss_dssp CEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TCCEEEEEECC-GGGGCCTTCHHHHHHHH
T ss_pred eEEEECCcccc-cCchhhCcchhhhccccccchhhhhhhhhccccccc---cccceeeeecc-ccccCCCCCcchHHHHH
Confidence 99999999988 789999999999999999999999999999999754 33445666555 67889999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCC-CCCCHHHHHHHHHHHHhcC----cee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLIQD----KIQ 468 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~~~ 468 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|.....+.. ....+...+ +..+|+|...++..+++.. ..+
T Consensus 154 al~~ltk~lA~ela--~~gIrVN~I~PG~v~-T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~ 230 (242)
T d1ulsa_ 154 GVVGLTRTLALELG--RWGIRVNTLAPGFIE-TRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQ 230 (242)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHh--hhCcEEEEEeeCccc-ChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCc
Confidence 99999999988765 456788899888764 55544332222 222233222 3458999999998887543 235
Q ss_pred eeeechhh
Q psy616 469 YLVLSGEL 476 (1152)
Q Consensus 469 ~~v~~~~~ 476 (1152)
.+.++|-+
T Consensus 231 ~i~vDGG~ 238 (242)
T d1ulsa_ 231 VLFVDGGR 238 (242)
T ss_dssp EEEESTTT
T ss_pred EEEECCCc
Confidence 66666654
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.94 E-value=1.1e-25 Score=247.80 Aligned_cols=237 Identities=14% Similarity=0.181 Sum_probs=185.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..+++.+++...+ .+.+++||++|+++++++++++.++||+
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAK-VVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKHGK 82 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999985 5555565 44566666775544 5888999999999999999999999999
Q ss_pred eeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh-hhhH
Q psy616 314 IDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC-DYAM 391 (1152)
Q Consensus 314 idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~-~Yaa 391 (1152)
||++|||||+... +..+.+.+.++|++++++|+.|++++.|+++|+|++. ..+.||++||+++..+.++.. .|++
T Consensus 83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~---~~g~ii~iss~~~~~~~~~~~~~Y~a 159 (268)
T d2bgka1 83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA---KKGSIVFTASISSFTAGEGVSHVYTA 159 (268)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG---TCEEEEEECCGGGTCCCTTSCHHHHH
T ss_pred cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc---CCCCccccccccccccccccccccch
Confidence 9999999998652 2357889999999999999999999999999998653 346799999999999887754 8999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc----cchhHHhh-c-C-CCCCCHHHHHHHHHHHHhc
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE----QTDFYFKS-S-K-QKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~----~~~~~~~~-~-g-~~~l~~~e~~~~l~~~l~~ 464 (1152)
+|+++.+|++.++.+.. ..++++.+|.+|... +.|..+... ........ . - -+..+|+|...++..+++.
T Consensus 160 sKaal~~lt~~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~ 236 (268)
T d2bgka1 160 TKHAVLGLTTSLCTELG--EYGIRVNCVSPYIVA-SPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGD 236 (268)
T ss_dssp HHHHHHHHHHHHHHHHG--GGTEEEEEEEESCCS-CCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSG
T ss_pred hHHHHHhCHHHHHHHhC--hhCeEEEecCCCCcc-ChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhCh
Confidence 99999999999988754 456788888887654 455432211 11111111 1 1 1456899999999988854
Q ss_pred C----ceeeeeechhhhHH
Q psy616 465 D----KIQYLVLSGELEKL 479 (1152)
Q Consensus 465 ~----~~~~~v~~~~~~~~ 479 (1152)
. ..|.+.++|-|...
T Consensus 237 ~s~~itGq~i~VDGG~t~~ 255 (268)
T d2bgka1 237 ESKYVSGLNLVIDGGYTRT 255 (268)
T ss_dssp GGTTCCSCEEEESTTGGGC
T ss_pred hhCCccCceEEECcCcccC
Confidence 3 34778888887653
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.93 E-value=2.7e-25 Score=243.48 Aligned_cols=235 Identities=18% Similarity=0.168 Sum_probs=184.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l-~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..++..+++ +..|.++.+++||++|+++++++++++.++||
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGAN-VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 86 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEE-EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999985 5555555 5555666665 45588999999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-------CCCC
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-------GDFG 385 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~-------g~~g 385 (1152)
+||++|||||+.. ..++.+++.++|++++++|+.|++++.+++.|+|.+. ...+.|+++||..... +.++
T Consensus 87 ~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~~~g~i~~~~s~~~~~~~~~~~~~~~~ 163 (260)
T d1h5qa_ 87 PISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK--QQKGSIVVTSSMSSQIINQSSLNGSLT 163 (260)
T ss_dssp SEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEECCGGGTSCCEEETTEECS
T ss_pred CCcEecccccccc-cCCHHHhccccccccccccccchhhhhhhhccccccc--ccceEEEEeeccccccccccccccCcc
Confidence 9999999999987 7899999999999999999999999999999998543 3456788888876654 3468
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCC-CCCCHHHHHHHHHHHHh
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ-KVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~-~~l~~~e~~~~l~~~l~ 463 (1152)
+..|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|........ +...+...+ +..+|+|...++..+++
T Consensus 164 ~~~Y~asKaal~~lt~~lA~el~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S 240 (260)
T d1h5qa_ 164 QVFYNSSKAACSNLVKGLAAEWA--SAGIRVNALSPGYVN-TDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLS 240 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC-CGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS
T ss_pred ccchhhhhhhHHHHHHHHHHHhc--hhCeEEeecCCCccc-CcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhc
Confidence 89999999999999999987754 456788889888764 45543332221 222222222 34589999999888775
Q ss_pred cC----ceeeeeechhh
Q psy616 464 QD----KIQYLVLSGEL 476 (1152)
Q Consensus 464 ~~----~~~~~v~~~~~ 476 (1152)
.. ..+.+.++|-+
T Consensus 241 ~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 241 DHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp GGGTTCCSCEEEECTTG
T ss_pred chhCCCcCceEEECCCe
Confidence 33 23556666543
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.93 E-value=6.5e-25 Score=239.74 Aligned_cols=234 Identities=12% Similarity=0.085 Sum_probs=188.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-C
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-G 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-G 312 (1152)
++|++|||||++|||+++|+.|+++|+ +|++++|+ +..++..++++..+.+++++.||++++++++++++++.+++ |
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g 83 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 83 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 689999999999999999999999998 56666666 45577788888899999999999999999999999999998 6
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
++|+||||||... ..++.+++.++|++++++|+.+++++.+++.|.|++. ..+.||++||+++..|.+++..|+++
T Consensus 84 ~idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~---~~g~ii~isS~~~~~~~~~~~~Y~~s 159 (258)
T d1ae1a_ 84 KLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS---QNGNVIFLSSIAGFSALPSVSLYSAS 159 (258)
T ss_dssp CCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CcEEEeccccccc-cCccccCCHHHHhhhhhhccccccccccccccccccc---cccccccccccccccccccchhHHHH
Confidence 8999999999988 7899999999999999999999999999999998764 45679999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-------ccchhHHhhcCC-CCCCHHHHHHHHHHHHhc
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-------EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-------~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~ 464 (1152)
|+++.+|++.++.+.. ..++++.+|.+|... +.|..... +......+...+ +..+|+|...++..+++.
T Consensus 160 K~al~~lt~~lA~el~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~ 236 (258)
T d1ae1a_ 160 KGAINQMTKSLACEWA--KDNIRVNSVAPGVIL-TPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFP 236 (258)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECSBC--------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhcC--cCcEEEEEEeeCccc-CcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence 9999999999988754 445688888887764 33322111 111112222222 246899999999888853
Q ss_pred C----ceeeeeechhh
Q psy616 465 D----KIQYLVLSGEL 476 (1152)
Q Consensus 465 ~----~~~~~v~~~~~ 476 (1152)
. ..+.+.+++-+
T Consensus 237 ~s~~itG~~i~vDGG~ 252 (258)
T d1ae1a_ 237 AASYITGQIIWADGGF 252 (258)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred hhCCCcCcEEEeCCCe
Confidence 3 23556666654
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.93 E-value=4.1e-25 Score=242.52 Aligned_cols=234 Identities=12% Similarity=0.090 Sum_probs=174.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCC---CcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFN---NKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g---~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..+++.+++++.+ .++.+++||++|+++++++++++.++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAK-VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 82 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 6899999999999999999999999985 5666666 45577778887764 35999999999999999999999999
Q ss_pred cCCeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc-cccCCCCC
Q psy616 311 IGPIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS-AILGDFGS 386 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a-~~~g~~g~ 386 (1152)
||+||++|||||+... ..++.+.+.|+|++++++|+.|++++.++++|+|++.. +.+|+++|+. +..+.+++
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~----g~iI~~~S~~~~~~~~~~~ 158 (264)
T d1spxa_ 83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK----GEIVNISSIASGLHATPDF 158 (264)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEECCTTSSSSCCTTS
T ss_pred hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc----CcceeeeeeccccccCCCc
Confidence 9999999999998641 23566789999999999999999999999999987632 3466666654 67899999
Q ss_pred hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc----------chhHHhhcCC-CCCCHHHHH
Q psy616 387 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ----------TDFYFKSSKQ-KVLHENDGL 455 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~----------~~~~~~~~g~-~~l~~~e~~ 455 (1152)
..|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|....... .....+...+ +..+|+|..
T Consensus 159 ~~Y~asKaal~~lt~~lA~el~--~~gIrVN~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA 235 (264)
T d1spxa_ 159 PYYSIAKAAIDQYTRNTAIDLI--QHGIRVNSISPGLVA-TGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIA 235 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-CCC--------------HHHHHHHHHHCTTSSCBCHHHHH
T ss_pred hhhhhhhhhHHHHHHHHHHHhc--ccCeEEEEEeeCCCC-CcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHH
Confidence 9999999999999999998765 456788899888764 4443221100 0011122222 345799999
Q ss_pred HHHHHHHhcC-----ceeeeeechhh
Q psy616 456 KLFEQLLIQD-----KIQYLVLSGEL 476 (1152)
Q Consensus 456 ~~l~~~l~~~-----~~~~~v~~~~~ 476 (1152)
+++..+++.+ ..+.+.++|-+
T Consensus 236 ~~v~fL~S~~~s~~itG~~i~vDGG~ 261 (264)
T d1spxa_ 236 EVIAFLADRKTSSYIIGHQLVVDGGS 261 (264)
T ss_dssp HHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred HHHHHHhCCcccCCccCceEEeCCCh
Confidence 9998877533 23566666654
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=6.8e-25 Score=237.62 Aligned_cols=228 Identities=13% Similarity=0.089 Sum_probs=176.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|+ +|++++|++. ..+++.+....+.++.+|++|++++++++ +++|+|
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~---~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~----~~~g~i 77 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQA---DLDSLVRECPGIEPVCVDLGDWEATERAL----GSVGPV 77 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHH---HHHHHHHHSTTCEEEECCTTCHHHHHHHH----TTCCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHH---HHHHHHHhcCCCeEEEEeCCCHHHHHHHH----HHhCCc
Confidence 689999999999999999999999998 5666677632 12223222335788999999999987665 568999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|.+. ...+.||++||+++..+.+++..|+++|+
T Consensus 78 DilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~--~~~g~Ii~isS~~~~~~~~~~~~Y~asKa 154 (244)
T d1pr9a_ 78 DLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR--GVPGAIVNVSSQCSQRAVTNHSVYCSTKG 154 (244)
T ss_dssp CEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred eEEEecccccc-ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh--CCcceEeecccccccccccchhhhhhhHH
Confidence 99999999988 7899999999999999999999999999999976432 34578999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---chhHHhhcCC-CCCCHHHHHHHHHHHHhcC----c
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD----K 466 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~ 466 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|....... .....+...+ +..+|+|..+++..+++.. .
T Consensus 155 al~~lt~~lA~el~--~~gIrvN~I~PG~v~-T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~it 231 (244)
T d1pr9a_ 155 ALDMLTKVMALELG--PHKIRVNAVNPTVVM-TSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT 231 (244)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCBC-SHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHhC--CCcEEEEEEeeCcCc-ChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcC
Confidence 99999999988754 456788899887764 4453322111 1112222222 3468999999998877543 2
Q ss_pred eeeeeechhh
Q psy616 467 IQYLVLSGEL 476 (1152)
Q Consensus 467 ~~~~v~~~~~ 476 (1152)
.+.+.++|-|
T Consensus 232 G~~i~vDGG~ 241 (244)
T d1pr9a_ 232 GSTLPVEGGF 241 (244)
T ss_dssp SCEEEESTTG
T ss_pred CcEEEECccH
Confidence 3666666654
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.93 E-value=5.2e-25 Score=242.73 Aligned_cols=234 Identities=14% Similarity=0.121 Sum_probs=180.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCC---CcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFN---NKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g---~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
++|++|||||++|||+++|+.|+++|+ +|++++|+ +..+++.+++++.+ .++.+++||++|+++++++++++.++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 82 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 82 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 589999999999999999999999998 55666666 45577777887664 46999999999999999999999999
Q ss_pred cCCeeEEEEcccccCcCccc----ccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEec-CCccccCCCC
Q psy616 311 IGPIDGVLHIAGISGLTSNI----LEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFS-SSSAILGDFG 385 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~----~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~S-S~a~~~g~~g 385 (1152)
||+||++|||||+.. ...+ .+.+.++|++++++|+.|++++.++++|+|++. . +.+|+++ |.++..+.++
T Consensus 83 ~g~iDilvnnAG~~~-~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~---~-g~iI~~~Ss~a~~~~~~~ 157 (272)
T d1xkqa_ 83 FGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS---K-GEIVNVSSIVAGPQAQPD 157 (272)
T ss_dssp HSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---T-CEEEEECCGGGSSSCCCS
T ss_pred hCCceEEEeCCcccC-cccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc---C-CccccccchhccccCCCC
Confidence 999999999999876 3333 567888999999999999999999999999753 2 3355555 4677899999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc---c---hhHHh----hcCC-CCCCHHHH
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---T---DFYFK----SSKQ-KVLHENDG 454 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---~---~~~~~----~~g~-~~l~~~e~ 454 (1152)
++.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|....... . ..... ...+ +..+|+|.
T Consensus 158 ~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pedi 234 (272)
T d1xkqa_ 158 FLYYAIAKAALDQYTRSTAIDLA--KFGIRVNSVSPGMVE-TGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHI 234 (272)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCBC-SSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred cchhhhHHHHHHHHHHHHHHHhc--ccCeEEEEEeeCCCc-chhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHH
Confidence 99999999999999999998765 456788999988664 4443211110 0 00011 1111 23489999
Q ss_pred HHHHHHHHhcC-----ceeeeeechhhh
Q psy616 455 LKLFEQLLIQD-----KIQYLVLSGELE 477 (1152)
Q Consensus 455 ~~~l~~~l~~~-----~~~~~v~~~~~~ 477 (1152)
..++..+++.+ ..|.+.++|-+.
T Consensus 235 A~~v~fL~S~~as~~iTG~~i~vDGG~~ 262 (272)
T d1xkqa_ 235 ANIILFLADRNLSFYILGQSIVADGGTS 262 (272)
T ss_dssp HHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCcchhCCccCeEEEeCcCHH
Confidence 99988877532 246677777654
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.93 E-value=5.5e-25 Score=239.75 Aligned_cols=228 Identities=12% Similarity=0.065 Sum_probs=178.5
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH--hCCCcEEEEEecCC-CHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK--KFNNKAIYIQVDVS-DKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~--~~g~~v~~~~~Dvs-d~~~v~~~~~~~~~~~ 311 (1152)
++|++|||||++|||+++|+.|+++|++++++.++.+..+.. +++. ..+.++.++.+|++ +.++++++++.+.+++
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 82 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence 589999999999999999999999999888887776654444 3333 23458999999998 7788999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|+||+||||||... .++|++++++|+.|++++.++++|+|.+.+..+.+.||++||.++..+.+++..|++
T Consensus 83 g~iDilvnnAG~~~---------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~a 153 (254)
T d1sbya1 83 KTVDILINGAGILD---------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSA 153 (254)
T ss_dssp SCCCEEEECCCCCC---------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHH
T ss_pred CCCCEEEeCCCCCC---------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHH
Confidence 99999999999643 467999999999999999999999998776667789999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhH-HhhcCCCCCCHHHHHHHHHHHHhcCc-
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFY-FKSSKQKVLHENDGLKLFEQLLIQDK- 466 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~-~~~~g~~~l~~~e~~~~l~~~l~~~~- 466 (1152)
+|+++.+|++.++.+.. ..++++.+|++|... +.|...... ..... ....+....+++++.+.+..++....
T Consensus 154 sKaal~~~t~~la~el~--~~gIrVn~I~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~~t 230 (254)
T d1sbya1 154 SKAAVVSFTNSLAKLAP--ITGVTAYSINPGITR-TPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANKN 230 (254)
T ss_dssp HHHHHHHHHHHHHHHHH--HHSEEEEEEEECSEE-SHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHhhcc--ccCeEEEEEEeCCCc-CccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCCCC
Confidence 99999999999987743 446789999988664 444321111 11111 11233345678998888877775543
Q ss_pred eeeeeechh
Q psy616 467 IQYLVLSGE 475 (1152)
Q Consensus 467 ~~~~v~~~~ 475 (1152)
.+++.+++.
T Consensus 231 G~vi~vdgG 239 (254)
T d1sbya1 231 GAIWKLDLG 239 (254)
T ss_dssp TCEEEEETT
T ss_pred CCEEEECCC
Confidence 355555543
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.6e-24 Score=241.17 Aligned_cols=236 Identities=15% Similarity=0.094 Sum_probs=186.4
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHh-----CCCcEEEEEecCCCHHHHHHHHHHH
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKK-----FNNKAIYIQVDVSDKLKMISEINSI 307 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~-----~g~~v~~~~~Dvsd~~~v~~~~~~~ 307 (1152)
-++|++|||||++|||+++|+.|+++|++ |++++|+ +..++..++|++ .+.++.+++||++|+++++++++++
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~-Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSN-VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 47999999999999999999999999985 5566665 455666777764 3678999999999999999999999
Q ss_pred HhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCCh
Q psy616 308 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSC 387 (1152)
Q Consensus 308 ~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~ 387 (1152)
.++||+||++|||||+.. ..++.+.+.++|++++++|+.|++++.++++|.|++.. .+.||++|| ++..+.+++.
T Consensus 89 ~~~~G~iDiLVnnAg~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~---~g~Ii~~ss-~~~~~~~~~~ 163 (297)
T d1yxma1 89 LDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH---GGSIVNIIV-PTKAGFPLAV 163 (297)
T ss_dssp HHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH---CEEEEEECC-CCTTCCTTCH
T ss_pred HHHhCCeEEEEeeccccc-cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc---ccccccccc-cccccccccc
Confidence 999999999999999987 78999999999999999999999999999999987653 345777755 5667889999
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-----cchhHHhhcCC-CCCCHHHHHHHHHHH
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-----QTDFYFKSSKQ-KVLHENDGLKLFEQL 461 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-----~~~~~~~~~g~-~~l~~~e~~~~l~~~ 461 (1152)
.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|...... ......+...+ +..+|+|...++..+
T Consensus 164 ~Y~asKaal~~ltk~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL 240 (297)
T d1yxma1 164 HSGAARAGVYNLTKSLALEWA--CSGIRINCVAPGVIY-SQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFL 240 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEECSBC-CTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHhc--ccCceEEEeeeCcCc-CcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999998765 456788888888764 333322111 11111222222 345799999999888
Q ss_pred HhcC----ceeeeeechhhhH
Q psy616 462 LIQD----KIQYLVLSGELEK 478 (1152)
Q Consensus 462 l~~~----~~~~~v~~~~~~~ 478 (1152)
++.. ..|.+.++|-+.-
T Consensus 241 ~Sd~s~~iTG~~i~VDGG~sl 261 (297)
T d1yxma1 241 LSPAASFITGQSVDVDGGRSL 261 (297)
T ss_dssp HSGGGTTCCSCEEEESTTGGG
T ss_pred hCchhcCcCCcEEEeCcChhh
Confidence 7543 3467777777643
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=5.9e-25 Score=237.75 Aligned_cols=228 Identities=14% Similarity=0.062 Sum_probs=176.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|++. ..+++.+....+.++.||++|++++++++ ++||+|
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~---~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~----~~~g~i 75 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAK-VVAVTRTNS---DLVSLAKECPGIEPVCVDLGDWDATEKAL----GGIGPV 75 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHH---HHHHHHHHSTTCEEEECCTTCHHHHHHHH----TTCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHH---HHHHHHHhcCCCeEEEEeCCCHHHHHHHH----HHcCCC
Confidence 5899999999999999999999999985 566666632 12223333345778999999999887655 568999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|+||||||+.. ..++.+++.++|++++++|+.|++++.+.+.|.|.+. ...+.||++||+++..+.++++.|+++|+
T Consensus 76 DilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~--~~~g~ii~isS~~~~~~~~~~~~Y~asKa 152 (242)
T d1cyda_ 76 DLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR--GVPGSIVNVSSMVAHVTFPNLITYSSTKG 152 (242)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred eEEEECCcccc-chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh--cccCcccccchhhccccCCccccccchHH
Confidence 99999999987 7899999999999999999999999999999987543 24467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC----c
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD----K 466 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~ 466 (1152)
++.+|++.++.+.. ..++++.+|.+|... +.|..... +......+...+ +..+|+|...++..++... .
T Consensus 153 al~~lt~~lA~e~~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~it 229 (242)
T d1cyda_ 153 AMTMLTKAMAMELG--PHKIRVNSVNPTVVL-TDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTS 229 (242)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECCBT-THHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHhC--ccCeecccCCCCCcc-CHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcC
Confidence 99999999988754 456788899888764 44432211 111222223322 3468999999998877543 2
Q ss_pred eeeeeechhh
Q psy616 467 IQYLVLSGEL 476 (1152)
Q Consensus 467 ~~~~v~~~~~ 476 (1152)
.|.+.++|-|
T Consensus 230 G~~i~vDGG~ 239 (242)
T d1cyda_ 230 GGGILVDAGY 239 (242)
T ss_dssp SSEEEESTTG
T ss_pred CceEEeCcch
Confidence 3566666654
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.93 E-value=2.5e-25 Score=248.31 Aligned_cols=223 Identities=15% Similarity=0.129 Sum_probs=177.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC----------cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS----------KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEI 304 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~----------~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~ 304 (1152)
++|++|||||++|||+++|+.|+++|++ |++..|+ ...++..+++...+ ....+|++|.+++++++
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~-Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~v 81 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGAL-VVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GKAVANYDSVEAGEKLV 81 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CEEEEECCCGGGHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCchhhhhhhhHHHHHHHHHHHhhcc---cccccccchHHHHHHHH
Confidence 6899999999999999999999999985 5554433 12244555555544 45678999999999999
Q ss_pred HHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC
Q psy616 305 NSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF 384 (1152)
Q Consensus 305 ~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~ 384 (1152)
+++.++||+||+||||||+.. ..++.+++.++|++++++|+.|++++.++++|+|++.+ .+.||++||+++..|.+
T Consensus 82 ~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~---~G~IV~isS~~~~~~~~ 157 (302)
T d1gz6a_ 82 KTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN---YGRIIMTASASGIYGNF 157 (302)
T ss_dssp HHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHHCCT
T ss_pred HHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC---CcEEEEeCChhhcCCCC
Confidence 999999999999999999998 88999999999999999999999999999999997643 46799999999999999
Q ss_pred CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhc
Q psy616 385 GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQ 464 (1152)
Q Consensus 385 g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~ 464 (1152)
+++.|+++|+++.+|++.++.+.. ..++++.+|.+|.. .+.|.....+ .+. +.+.|+|...++..++..
T Consensus 158 ~~~~Y~asKaal~~lt~~la~E~~--~~gIrVN~I~PG~~-~t~~~~~~~~----~~~----~~~~PedvA~~v~fL~S~ 226 (302)
T d1gz6a_ 158 GQANYSAAKLGLLGLANTLVIEGR--KNNIHCNTIAPNAG-SRMTETVMPE----DLV----EALKPEYVAPLVLWLCHE 226 (302)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEEEEECC-STTTGGGSCH----HHH----HHSCGGGTHHHHHHHTST
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHh--ccCCceeeeCCCCC-CcchhhcCcH----hhH----hcCCHHHHHHHHHHHcCC
Confidence 999999999999999999998865 45677888877654 3333221111 111 236789999988877642
Q ss_pred C---ceeeeeechhh
Q psy616 465 D---KIQYLVLSGEL 476 (1152)
Q Consensus 465 ~---~~~~~v~~~~~ 476 (1152)
. ..+.+.+++.|
T Consensus 227 ~a~itG~~i~vdGG~ 241 (302)
T d1gz6a_ 227 SCEENGGLFEVGAGW 241 (302)
T ss_dssp TCCCCSCEEEEETTE
T ss_pred CcCCCCcEEEeCCCc
Confidence 2 22555566554
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=6.4e-25 Score=239.49 Aligned_cols=228 Identities=17% Similarity=0.189 Sum_probs=177.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.||++|||||++|||+++|+.|+++|++ |++++|+ +..++..+++.+. +.++.+++||++|+++++++++++.++|
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999999999985 5555665 4556666777543 5689999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|+||++|||||+.. . ++|++++++|+.+++++.++++|+|++......+.||++||+++..+.++++.|++
T Consensus 81 G~iDilVnnAg~~~-~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a 151 (254)
T d2gdza1 81 GRLDILVNNAGVNN-E--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA 151 (254)
T ss_dssp SCCCEEEECCCCCC-S--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred CCcCeecccccccc-c--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence 99999999999865 2 35899999999999999999999998766666789999999999999999999999
Q ss_pred HHHHHHHHHHH--HHhcccccCCCceEEEEeCCcccCcccccccccc---------chhHHhhcC-CCCCCHHHHHHHHH
Q psy616 392 GNRFQTVYAKY--LNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ---------TDFYFKSSK-QKVLHENDGLKLFE 459 (1152)
Q Consensus 392 ana~l~~la~~--~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~---------~~~~~~~~g-~~~l~~~e~~~~l~ 459 (1152)
+|+++.+|++. ++.+.. ..++++.+|++|... +.|....... .+...+... -+..+|+|..+++.
T Consensus 152 sKaal~~ltrs~ala~e~~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~ 228 (254)
T d2gdza1 152 SKHGIVGFTRSAALAANLM--NSGVRLNAICPGFVN-TAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI 228 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TCCEEEEEEEESCBS-SHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc--CCCEEEEEEEcCCCC-ChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 99999999986 444432 456799999988764 4443221110 001111111 13568999999999
Q ss_pred HHHhcC--ceeeeeechh
Q psy616 460 QLLIQD--KIQYLVLSGE 475 (1152)
Q Consensus 460 ~~l~~~--~~~~~v~~~~ 475 (1152)
.+++.+ ..+.+.+++.
T Consensus 229 fL~s~~~itG~~i~VdGG 246 (254)
T d2gdza1 229 TLIEDDALNGAIMKITTS 246 (254)
T ss_dssp HHHHCTTCSSCEEEEETT
T ss_pred HHHcCCCCCCCEEEECCC
Confidence 888754 2355555554
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.92 E-value=1e-24 Score=240.57 Aligned_cols=236 Identities=14% Similarity=0.106 Sum_probs=184.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCC---CcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFN---NKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g---~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
++|++|||||++|||+++|+.|+++|++ |++++|+ +..+++.+++++.+ .++.+++||++|+++++++++++.++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQ-VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5899999999999999999999999985 5555665 45577778887765 46899999999999999999999999
Q ss_pred cCCeeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 311 IGPIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
||+||++|||||.... .....+.+.|+|++++++|+.|++++.+++.|+|++. ..+.|+++||+++..+.++++.|
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~---~~g~ii~~ss~~~~~~~~~~~~Y 158 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT---KGEIVNVSSIVAGPQAHSGYPYY 158 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCEEEEECCGGGSSSCCTTSHHH
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc---ccccccchhhhhccccCCCCcee
Confidence 9999999999997541 3355677999999999999999999999999998753 34678888999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc------cchhHHh----hcCC-CCCCHHHHHHHH
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE------QTDFYFK----SSKQ-KVLHENDGLKLF 458 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~------~~~~~~~----~~g~-~~l~~~e~~~~l 458 (1152)
+++|+++.+|++.++.+.. ..++++.+|.+|... +.|...... ......+ ...+ +..+|+|...++
T Consensus 159 ~asKaal~~ltk~lA~ela--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v 235 (274)
T d1xhla_ 159 ACAKAALDQYTRCTAIDLI--QHGVRVNSVSPGAVA-TGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANII 235 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCBC-SSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHh--HhCCceeeeccCCCc-CchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHH
Confidence 9999999999999988765 456788888887664 444221110 0011111 1111 234899999999
Q ss_pred HHHHhcC-----ceeeeeechhhh
Q psy616 459 EQLLIQD-----KIQYLVLSGELE 477 (1152)
Q Consensus 459 ~~~l~~~-----~~~~~v~~~~~~ 477 (1152)
..+++.+ ..+.+.++|-+.
T Consensus 236 ~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 236 VFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp HHHHCHHHHTTCCSCEEEESTTGG
T ss_pred HHHcCCccccCccCcEEEeCcCHH
Confidence 8887532 336677777654
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=4.8e-25 Score=244.46 Aligned_cols=228 Identities=15% Similarity=0.104 Sum_probs=177.2
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEE--EecCCcc-hH---HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLI--LSGRSKL-NS---IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vi--l~~R~~~-~~---~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
.|++|||||++|||+++|+.|+++|++.++ ...|+.. .+ +..+++...+.++.+++||++|+++++++++++.+
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 478999999999999999999999987443 3455422 22 33344455678999999999999999999998754
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
|++|.||||||... ...+.+.+.++|++++++|+.|++++.++++|+|++. ..+.||++||+++..+.++++.|
T Consensus 82 --g~idilvnnag~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~---~~G~Iv~isS~~g~~~~~~~~~Y 155 (285)
T d1jtva_ 82 --GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR---GSGRVLVTGSVGGLMGLPFNDVY 155 (285)
T ss_dssp --SCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEEEEGGGTSCCTTCHHH
T ss_pred --cchhhhhhcccccc-cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc---CCCceEEEechhhcCCCCCchHH
Confidence 89999999999988 7889999999999999999999999999999999764 34679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccch------------hHH------hh-cCCCCCC
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTD------------FYF------KS-SKQKVLH 450 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~------------~~~------~~-~g~~~l~ 450 (1152)
+++|+++.+|++.++.+.. ..++++.+|++|... +.|......... ... +. ......+
T Consensus 156 ~asKaal~~l~~~la~El~--~~gIrVn~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T d1jtva_ 156 CASKFALEGLCESLAVLLL--PFGVHLSLIECGPVH-TAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQN 232 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-C-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBC
T ss_pred HHHHHHHHHHHHHHHHHhh--ccCcEEEEEecCCCC-ChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCC
Confidence 9999999999999998854 456788899887664 555332111000 000 00 0113568
Q ss_pred HHHHHHHHHHHHhcCceeeeee
Q psy616 451 ENDGLKLFEQLLIQDKIQYLVL 472 (1152)
Q Consensus 451 ~~e~~~~l~~~l~~~~~~~~v~ 472 (1152)
|+|+++++..++..+.|.....
T Consensus 233 PeeVA~~v~~~~~~~~p~~ry~ 254 (285)
T d1jtva_ 233 PEEVAEVFLTALRAPKPTLRYF 254 (285)
T ss_dssp HHHHHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHHHHHHHHhCCCCCeEEe
Confidence 9999999999998876654333
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.92 E-value=9.5e-25 Score=238.98 Aligned_cols=221 Identities=15% Similarity=0.087 Sum_probs=178.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.||++|||||++|||+++|+.|+++|+++++..+|+.. .+++.+++++.|.++.+++||++|+++++++++++.+++|+
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (259)
T d1ja9a_ 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999987777777744 46778888899999999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-CCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~-g~~g~~~Yaaa 392 (1152)
||++|||||+.. ..++.+.+.++|++++++|+.+++++.+++.|+|++ .+.+++++|.++.. |.+++..|+++
T Consensus 85 idilinnag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-----~g~~iii~s~~~~~~~~~~~~~Y~as 158 (259)
T d1ja9a_ 85 LDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-----GGRIILTSSIAAVMTGIPNHALYAGS 158 (259)
T ss_dssp EEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-----EEEEEEECCGGGTCCSCCSCHHHHHH
T ss_pred CcEEEecccccc-ccccccchHHHHHHHHhhccceeeeehhhhhhhhhc-----CCcccccccccccccCCCCchhHHHH
Confidence 999999999987 788999999999999999999999999999999743 23466666665544 78999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc--------------ccccchhHHhhcCC-CCCCHHHHHHH
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG--------------NNEQTDFYFKSSKQ-KVLHENDGLKL 457 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~--------------~~~~~~~~~~~~g~-~~l~~~e~~~~ 457 (1152)
|+++.+|++.++.+.. ..++++.+|.+|... +.|... .+...+...+...+ +..+|+|..++
T Consensus 159 K~al~~l~r~lA~e~~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~ 235 (259)
T d1ja9a_ 159 KAAVEGFCRAFAVDCG--AKGVTVNCIAPGGVK-TDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA 235 (259)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECCBS-SHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--hcCeEEeccCcCCcc-ChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 9999999999988754 446788888887664 332110 00111112222222 35678999988
Q ss_pred HHHHHhc
Q psy616 458 FEQLLIQ 464 (1152)
Q Consensus 458 l~~~l~~ 464 (1152)
+..++..
T Consensus 236 v~fL~S~ 242 (259)
T d1ja9a_ 236 VSALCQE 242 (259)
T ss_dssp HHHHHSG
T ss_pred HHHHhCc
Confidence 8877654
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.92 E-value=1.7e-24 Score=234.11 Aligned_cols=229 Identities=19% Similarity=0.217 Sum_probs=177.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|+ +|++.+|+. +.+.+.+++.+.++.+++||++++++++++++++.++||+|
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i 80 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREE--RLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL 80 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH--HHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCH--HHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 689999999999999999999999998 556667765 34455566778899999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||... ..++.+.+.++|++++++|+.+++.+.+++.|+|++ . +.++++|| .+..+.+++..|+++|+
T Consensus 81 DiLinnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~---~--~~i~~~ss-~a~~~~~~~~~Y~~sK~ 153 (241)
T d2a4ka1 81 HGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE---G--GSLVLTGS-VAGLGAFGLAHYAAGKL 153 (241)
T ss_dssp CEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT---T--CEEEEECC-CTTCCHHHHHHHHHCSS
T ss_pred cEecccccccc-ccchhhhhcccccccccccccccccccccccccccc---c--cceeeccc-cccccccCccccchhhH
Confidence 99999999987 789999999999999999999999999999998532 2 34555444 55566689999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcCC-CCCCHHHHHHHHHHHHhcC----cee
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ-KVLHENDGLKLFEQLLIQD----KIQ 468 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~~~ 468 (1152)
++++|+++++.+.. ..++++.+|.+|... +.|.....+. .....+...+ +..+|+|..+++..++... ..+
T Consensus 154 al~~lt~~lA~el~--~~gIrvN~I~PG~v~-T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~ 230 (241)
T d2a4ka1 154 GVVGLARTLALELA--RKGVRVNVLLPGLIQ-TPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ 230 (241)
T ss_dssp HHHHHHHHHHHHHT--TTTCEEEEEEECSBC-CGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHh--HhCCEEeeeccCcCC-CHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCc
Confidence 99999999998865 556789999888774 5565433222 2222233222 3458999999999888543 235
Q ss_pred eeeechhh
Q psy616 469 YLVLSGEL 476 (1152)
Q Consensus 469 ~~v~~~~~ 476 (1152)
.+.+++-+
T Consensus 231 ~i~vDGG~ 238 (241)
T d2a4ka1 231 ALYVDGGR 238 (241)
T ss_dssp EEEESTTT
T ss_pred eEEeCCCc
Confidence 56666654
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.92 E-value=3e-24 Score=237.04 Aligned_cols=232 Identities=16% Similarity=0.116 Sum_probs=177.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|+ +|++++|++ +++.+..++.+.++.++.+|++++++++++++++.++||+|
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~--~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 80 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSA--ERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKI 80 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH--HHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCH--HHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence 589999999999999999999999998 566666663 22323333457789999999999999999999999999999
Q ss_pred eEEEEcccccCcCcc----cccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhh
Q psy616 315 DGVLHIAGISGLTSN----ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYA 390 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~----~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya 390 (1152)
|++|||||+...... ..+.+.++|++++++|+.|++++.++++|+|++. .+.+|++||.++..+.++++.|+
T Consensus 81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~----~g~iI~i~S~~~~~~~~~~~~Y~ 156 (276)
T d1bdba_ 81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS----RGNVIFTISNAGFYPNGGGPLYT 156 (276)
T ss_dssp CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCGGGTSTTSSCHHHH
T ss_pred ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc----CCCceeeeechhccCCCCCchHH
Confidence 999999998652222 2445567899999999999999999999999763 25699999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc-----------cchhHHhhcCC-CCCCHHHHHHHH
Q psy616 391 MGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-----------QTDFYFKSSKQ-KVLHENDGLKLF 458 (1152)
Q Consensus 391 aana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-----------~~~~~~~~~g~-~~l~~~e~~~~l 458 (1152)
++|+++.+|++.++.+.. . .+++.+|.+|... +.|...... ..+...+...+ +.-+|+|...++
T Consensus 157 asKaal~~ltr~lA~ela--~-~IrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v 232 (276)
T d1bdba_ 157 AAKHAIVGLVRELAFELA--P-YVRVNGVGSGGIN-SDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAY 232 (276)
T ss_dssp HHHHHHHHHHHHHHHHHT--T-TCEEEEEEECCCC-SCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHH
T ss_pred HHHHHHHHHHHHHHHHhh--c-ceEEcccCCCCEe-cCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 999999999999998753 2 3788899888764 444221110 00111111112 234789988888
Q ss_pred HHHHhcC-----ceeeeeechhhh
Q psy616 459 EQLLIQD-----KIQYLVLSGELE 477 (1152)
Q Consensus 459 ~~~l~~~-----~~~~~v~~~~~~ 477 (1152)
..++..+ ..|.+.++|-+.
T Consensus 233 ~fL~S~~~a~~itG~~i~VDGG~~ 256 (276)
T d1bdba_ 233 VFFATRGDAAPATGALLNYDGGLG 256 (276)
T ss_dssp HHHHCHHHHTTCSSCEEEESSSGG
T ss_pred HHHcCCcccCCeeCcEEEECcChh
Confidence 7776532 247777777663
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.92 E-value=3.2e-24 Score=233.68 Aligned_cols=228 Identities=13% Similarity=0.026 Sum_probs=176.7
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
|+|||||++|||+++|+.|+++|+ +|++.+|+....+..+.+.. .+.+||++|+++++++++++.++||+||++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~-----~~~~~dv~~~~~~~~~~~~~~~~~G~iDiL 75 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAE-----TYPQLKPMSEQEPAELIEAVTSAYGQVDVL 75 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHH-----HCTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhC-----cEEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 799999999999999999999998 56666776433222222222 134689999999999999999999999999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHHHH
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQT 397 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~ 397 (1152)
|||||+.....++.+++.++|++++++|+.|++++.++++|+|++.+ .+.||++||+++..+.+++..|+++|+++.
T Consensus 76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~---~G~IV~isS~~~~~~~~~~~~Y~asKaal~ 152 (252)
T d1zmta1 76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK---SGHIIFITSATPFGPWKELSTYTSARAGAC 152 (252)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCSTTTSCCTTCHHHHHHHHHHH
T ss_pred EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc---cceeecccccccccccccccccccccccHH
Confidence 99999865357899999999999999999999999999999997653 467999999999999999999999999999
Q ss_pred HHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---------ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcCc-
Q psy616 398 VYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---------EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQDK- 466 (1152)
Q Consensus 398 ~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---------~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~~- 466 (1152)
+|++.++.+.. ..++++.+|.+|... +.|..... +......+...+ +.-+|+|...++..+++...
T Consensus 153 ~lt~~lA~ela--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~ 229 (252)
T d1zmta1 153 TLANALSKELG--EYNIPVFAIGPNYLH-SEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCD 229 (252)
T ss_dssp HHHHHHHHHHG--GGTCCEEEEEESSBC-CBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCG
T ss_pred HHHHHHHHHhc--ccCcEEEEEecCCCc-CcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 99999988765 456788888887664 44432211 111112222222 34589999999888775432
Q ss_pred ---eeeeeechhhh
Q psy616 467 ---IQYLVLSGELE 477 (1152)
Q Consensus 467 ---~~~~v~~~~~~ 477 (1152)
.|.+.++|-+.
T Consensus 230 ~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 230 YLTGQVFWLAGGFP 243 (252)
T ss_dssp GGTTCEEEESTTCC
T ss_pred CCcCCeEEECCCce
Confidence 36677776653
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.91 E-value=4.3e-24 Score=233.42 Aligned_cols=233 Identities=12% Similarity=0.040 Sum_probs=181.3
Q ss_pred CCCEEEEECCch--hHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~g--GIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++|++|||||+| |||+++|+.|+++|++ |++..|++...+..+++...+....+++||++|+++++++++++.++||
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence 689999999886 9999999999999985 6677787666555555655566778899999999999999999999999
Q ss_pred CeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 313 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
+||++|||||+... ...+.+.+.++|+.++++|+.+++.+.+++.|+|++ .+.||++||+++..+.+++..|
T Consensus 86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-----~G~Iv~isS~~~~~~~~~~~~Y 160 (256)
T d1ulua_ 86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-----GGGIVTLTYYASEKVVPKYNVM 160 (256)
T ss_dssp SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-----EEEEEEEECGGGTSBCTTCHHH
T ss_pred CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc-----CCEEEEEeehHhcCCCCCchHH
Confidence 99999999998641 335678899999999999999999999999988632 3679999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++|+++.+|++.++.+.. ..++++.+|.+|.... .|..... +..+...+...+ +..+|+|...++..+++..
T Consensus 161 ~asKaal~~ltr~lA~ela--~~gIrVN~I~PG~i~t-~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~ 237 (256)
T d1ulua_ 161 AIAKAALEASVRYLAYELG--PKGVRVNAISAGPVRT-VAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTCEEEEEEECCC-----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhc--ccCCEEeeeccceeee-ccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 9999999999999998765 4467888888887643 3322211 111222233333 3568999999998887543
Q ss_pred ----ceeeeeechhh
Q psy616 466 ----KIQYLVLSGEL 476 (1152)
Q Consensus 466 ----~~~~~v~~~~~ 476 (1152)
..+.+.+++-|
T Consensus 238 s~~itG~~i~VDGG~ 252 (256)
T d1ulua_ 238 ASGITGEVVYVDAGY 252 (256)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hCCccCCeEEECcCE
Confidence 23566666655
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.91 E-value=1.4e-23 Score=229.65 Aligned_cols=223 Identities=13% Similarity=0.097 Sum_probs=176.1
Q ss_pred CCCEEEEECCchhHHHHHHHHHHH---cCCcEEEEecCC-cchHHHHHHHHhC--CCcEEEEEecCCCHHHHHHHHHHHH
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLIN---KYSTNLILSGRS-KLNSIIYKKLKKF--NNKAIYIQVDVSDKLKMISEINSII 308 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~---~Ga~~vil~~R~-~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 308 (1152)
.+|++|||||++|||+++|+.|++ +|+ +|++++|+ +..+++.++|+.. +.++.+++||++|+++++++++.+.
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~ 83 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 589999999999999999999997 566 66666666 4556777777654 5689999999999999999999887
Q ss_pred h----hcCCeeEEEEcccccC--cCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC
Q psy616 309 N----NIGPIDGVLHIAGISG--LTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG 382 (1152)
Q Consensus 309 ~----~~G~idgvIh~AG~~~--~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g 382 (1152)
+ .++.+|.+|||||... ...++.+.+.++|+++|++|+.|++++.+++.|+|++. +...+.||++||+++..+
T Consensus 84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~-~~~~g~Iv~isS~~~~~~ 162 (259)
T d1oaaa_ 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDS-PGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCC-TTCEEEEEEECCGGGTSC
T ss_pred HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhc-CCCcccccccccccccCC
Confidence 6 3568999999999864 14568899999999999999999999999999997532 223578999999999999
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccc-----ccc-chhH--HhhcCCCCCCHHHH
Q psy616 383 DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGN-----NEQ-TDFY--FKSSKQKVLHENDG 454 (1152)
Q Consensus 383 ~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~-----~~~-~~~~--~~~~g~~~l~~~e~ 454 (1152)
.++++.|+++|+++.+|++.++.+ ..++++.+|.+|... +.|.... ... .... +...| +..+|+|.
T Consensus 163 ~~~~~~Y~asKaal~~lt~~la~e----~~gIrVn~v~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~ev 236 (259)
T d1oaaa_ 163 YKGWGLYCAGKAARDMLYQVLAAE----EPSVRVLSYAPGPLD-NDMQQLARETSKDPELRSKLQKLKSDG-ALVDCGTS 236 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHH----CTTEEEEEEECCSBS-SHHHHHHHHHCSCHHHHHHHHHHHHTT-CSBCHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHhC----CCCCEEEEEEcCCCC-CHHHHHhhhcCCCHHHHHHHHhcCCCC-CCCCHHHH
Confidence 999999999999999999999887 346899999988775 4443211 011 1111 11222 35789999
Q ss_pred HHHHHHHHhcC
Q psy616 455 LKLFEQLLIQD 465 (1152)
Q Consensus 455 ~~~l~~~l~~~ 465 (1152)
.+.+..++...
T Consensus 237 A~~i~~ll~~~ 247 (259)
T d1oaaa_ 237 AQKLLGLLQKD 247 (259)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHhhhc
Confidence 99888887643
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=3.3e-23 Score=227.93 Aligned_cols=225 Identities=9% Similarity=0.015 Sum_probs=183.6
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
-+||++|||||++|||+++|+.|+++|+ +|++++|+ +..+++.+++. ..+..+.++.+|+++.+.+...++.+.+.+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999998 56666776 44455555544 457789999999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhH
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAM 391 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaa 391 (1152)
|.+|.+|||||... ...+.+.+.++|++++++|+.|++.+.+.++|+|++. .+.||++||+++..+.++++.|++
T Consensus 91 g~~~~li~nag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~----~G~ii~isS~~~~~~~p~~~~Y~a 165 (269)
T d1xu9a_ 91 GGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS----NGSIVVVSSLAGKVAYPMVAAYSA 165 (269)
T ss_dssp TSCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEEEEGGGTSCCTTCHHHHH
T ss_pred CCcccccccccccc-ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc----CCcceEeccchhcCCCCCchHHHH
Confidence 99999999999987 7788899999999999999999999999999998642 367999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcCceeeee
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQDKIQYLV 471 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~~~~~~v 471 (1152)
+|+++.+|++.++.+....+.++++.+|.+|... +.|....... .......++++..+.+..........+..
T Consensus 166 sKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~-T~~~~~~~~~------~~~~~~~~~e~~a~~i~~~~~~~~~~i~~ 238 (269)
T d1xu9a_ 166 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID-TETAMKAVSG------IVHMQAAPKEECALEIIKGGALRQEEVYY 238 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC-CHHHHHHSCG------GGGGGCBCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCC-CcHHHHhccC------CccccCCCHHHHHHHHHHHhhcCCCEEEc
Confidence 9999999999999875434567899999988775 3342211100 01123578899888877777666655443
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.90 E-value=5.4e-23 Score=223.47 Aligned_cols=190 Identities=16% Similarity=0.127 Sum_probs=155.7
Q ss_pred CCEEEEECCchhHHHHHHHHHHH---cCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh--
Q psy616 236 GGTYLITGGTGRLGMLFSDYLIN---KYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN-- 309 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~---~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~-- 309 (1152)
-|++|||||++|||+++|+.|++ +|+ +|++++|++ ..+++ +++...+.++.+++||++|+++++++++++.+
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 79 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHH-HHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence 37899999999999999999974 555 666666764 33444 45555577899999999999999999999854
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcC--------CCCCEEEEecCCcccc
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQK--------NKLDFVCYFSSSSAIL 381 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~--------~~~~~iV~~SS~a~~~ 381 (1152)
++|+||++|||||+......+.+.+.++|++++++|+.|++++.+++.|+|++... ...+.+|++||+++.+
T Consensus 80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~ 159 (248)
T d1snya_ 80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 159 (248)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 68999999999998764557889999999999999999999999999999986432 2357899999998875
Q ss_pred C---CCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccc
Q psy616 382 G---DFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFK 430 (1152)
Q Consensus 382 g---~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~ 430 (1152)
+ .++..+|+++|+++.+|++.++.+.. ..++++.+|++|.. ++.|.
T Consensus 160 ~~~~~~~~~~Y~aSKaal~~lt~~la~e~~--~~gI~vn~v~PG~v-~T~m~ 208 (248)
T d1snya_ 160 QGNTDGGMYAYRTSKSALNAATKSLSVDLY--PQRIMCVSLHPGWV-KTDMG 208 (248)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEECCCSB-CSTTT
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEcCCCcc-cCCcc
Confidence 4 45788999999999999999987754 45679999998755 45553
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.90 E-value=6e-23 Score=226.21 Aligned_cols=231 Identities=12% Similarity=0.062 Sum_probs=182.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||++|||+++|+.|+++|++++++..|+ +..+++.++++..+.++.+++||++|+++++++++++.++||+
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 96 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 96 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999999766665554 3456777888889999999999999999999999999999999
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-CCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~-g~~g~~~Yaaa 392 (1152)
||++|||+|... ..++.+.+.++|++++++|+.|++++.+++.|+|++ .+.+++++|+.+.. +.++++.|+++
T Consensus 97 idilV~nag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-----~g~~i~i~s~~~~~~~~~~~~~Y~as 170 (272)
T d1g0oa_ 97 LDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-----GGRLILMGSITGQAKAVPKHAVYSGS 170 (272)
T ss_dssp CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-----TCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred CCccccccccch-hhhhhhhhhhHHHHHhhhccceeeeecccccccccc-----ccccccccccccccccccchhhHHHH
Confidence 999999999987 788999999999999999999999999999999743 25678888877654 57788999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---------ccch-----hHHhhcCC-CCCCHHHHHHH
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---------EQTD-----FYFKSSKQ-KVLHENDGLKL 457 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---------~~~~-----~~~~~~g~-~~l~~~e~~~~ 457 (1152)
|++|.+|++.++.+.. ..++++.+|.+|... +.|..... .... ...+...+ +..+|+|...+
T Consensus 171 Kaal~~ltk~lA~e~~--~~gIrVN~I~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~ 247 (272)
T d1g0oa_ 171 KGAIETFARCMAIDMA--DKKITVNVVAPGGIK-TDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV 247 (272)
T ss_dssp HHHHHHHHHHHHHHHG--GGTCEEEEEEECCBS-SHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--hhCeEEEEEccCCcC-ChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHH
Confidence 9999999999988764 346688888877664 33321100 0000 01112222 45789999999
Q ss_pred HHHHHhcCc----eeeeeech
Q psy616 458 FEQLLIQDK----IQYLVLSG 474 (1152)
Q Consensus 458 l~~~l~~~~----~~~~v~~~ 474 (1152)
+..++.... .+.+.++|
T Consensus 248 v~fL~s~~s~~itG~~i~vDG 268 (272)
T d1g0oa_ 248 VCFLASNDGGWVTGKVIGIDG 268 (272)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHhCchhcCccCceEeECC
Confidence 998875432 24455544
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.90 E-value=4.6e-23 Score=221.86 Aligned_cols=221 Identities=13% Similarity=0.092 Sum_probs=171.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|+ +|++++|++ +.+++.+. .++.||+++. ++.+.+++|+|
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~------~~l~~~~~--~~~~~Dv~~~------~~~~~~~~g~i 67 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNE------ELLKRSGH--RYVVCDLRKD------LDLLFEKVKEV 67 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCH------HHHHHTCS--EEEECCTTTC------HHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCH------HHHHhcCC--cEEEcchHHH------HHHHHHHhCCC
Confidence 589999999999999999999999998 566667763 23444454 4678999863 45566788999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNR 394 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana 394 (1152)
|++|||||+.. ..++.+++.++|++++++|+.+++++.++++|+|++. ..+.||++||+.+..+.++...|+++|+
T Consensus 68 D~lVnnAG~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---~~G~ii~i~S~~~~~~~~~~~~Y~asKa 143 (234)
T d1o5ia_ 68 DILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK---GWGRIVAITSFSVISPIENLYTSNSARM 143 (234)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred cEEEecccccC-CcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc---ccccccccccccccccccccccchhHHH
Confidence 99999999887 7889999999999999999999999999999998764 3467999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccc-ccc-cchhHHhhcCC-CCCCHHHHHHHHHHHHhcC----ce
Q psy616 395 FQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIG-NNE-QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD----KI 467 (1152)
Q Consensus 395 ~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~-~~~-~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~~ 467 (1152)
++.+|++.++.+.. ..++++.+|.+|.... .|... ..+ ......+...+ +..+|+|...++..+++.. ..
T Consensus 144 al~~ltk~lA~ela--~~gIrVN~I~PG~v~T-~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG 220 (234)
T d1o5ia_ 144 ALTGFLKTLSFEVA--PYGITVNCVAPGWTET-ERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTG 220 (234)
T ss_dssp HHHHHHHHHHHHHG--GGTEEEEEEEECSBCC-TTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhc--ccCeEEeecccCccch-hhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcC
Confidence 99999999988765 4467888888876654 33221 111 11112222222 2457999999998877543 23
Q ss_pred eeeeechhhh
Q psy616 468 QYLVLSGELE 477 (1152)
Q Consensus 468 ~~~v~~~~~~ 477 (1152)
|.+.++|-+.
T Consensus 221 ~~i~vDGG~s 230 (234)
T d1o5ia_ 221 QTIVVDGGLS 230 (234)
T ss_dssp CEEEESTTCC
T ss_pred cEEEECcccc
Confidence 6777777654
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=8.8e-24 Score=233.40 Aligned_cols=207 Identities=16% Similarity=0.075 Sum_probs=167.9
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+++|||||++|||+++|+.|+++++.+|++++|+ +..++..++|++.+.++.+++||++|.++++++++++.+++|+|
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i 82 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 82 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 35779999999999999999999855578887877 45577888899889999999999999999999999999999999
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF---------- 384 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~---------- 384 (1152)
|+||||||+.. .....+.+.++|+.+|++|+.|++++.+.++|+|++ .+.||++||+++..+.+
T Consensus 83 DiLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-----~g~ivnisS~~~~~~~~~~~~y~~~k~ 156 (275)
T d1wmaa1 83 DVLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-----QGRVVNVSSIMSVRALKSCSPELQQKF 156 (275)
T ss_dssp EEEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred EEEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCcccccccceeccccccchhhhhhh
Confidence 99999999987 677788889999999999999999999999998732 36799999987754322
Q ss_pred -------------------------------CChhhhHHHHHHHHHHHHHHhcccc--cCCCceEEEEeCCcccCccccc
Q psy616 385 -------------------------------GSCDYAMGNRFQTVYAKYLNNKNIY--KKYTNKLITINWPLWNNSKFKI 431 (1152)
Q Consensus 385 -------------------------------g~~~Yaaana~l~~la~~~~~~g~~--~~~~~~~~si~wg~w~~~Gm~~ 431 (1152)
+..+|+++|+++..|++.++.+... ...++++.+|++|.. .+.|..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v-~T~m~~ 235 (275)
T d1wmaa1 157 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV-RTDMAG 235 (275)
T ss_dssp HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB-CSTTTC
T ss_pred cccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccc-cCCccc
Confidence 2457999999999999887654221 134678889988755 455532
Q ss_pred cccccchhHHhhcCCCCCCHHHHHHHHHHHH
Q psy616 432 GNNEQTDFYFKSSKQKVLHENDGLKLFEQLL 462 (1152)
Q Consensus 432 ~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l 462 (1152)
. ....+|+|+.+....+.
T Consensus 236 ~-------------~~~~~pee~A~~~~~~a 253 (275)
T d1wmaa1 236 P-------------KATKSPEEGAETPVYLA 253 (275)
T ss_dssp T-------------TCSBCHHHHTHHHHHHH
T ss_pred C-------------cccCCHHHHHHHHHHHH
Confidence 1 12457899887766544
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.88 E-value=3.7e-22 Score=217.08 Aligned_cols=210 Identities=13% Similarity=0.130 Sum_probs=161.6
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLNSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~-~vil~~R~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.|++|||||++|||+++|+.|+++|+. +|++.+|+.... +++++ .+.++.+++||++|.++++++++++.+.+|.
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~---~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 79 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA---TELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS 79 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC---HHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH---HHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence 489999999999999999999999984 788888875321 22333 4678999999999999999999999988774
Q ss_pred --eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCC--------CCCEEEEecCCccccCC
Q psy616 314 --IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKN--------KLDFVCYFSSSSAILGD 383 (1152)
Q Consensus 314 --idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~--------~~~~iV~~SS~a~~~g~ 383 (1152)
||+||||||+.....++.+.+.++|++++++|+.|++++.+.++|+|++.... ..+.++++||..+....
T Consensus 80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 159 (250)
T d1yo6a1 80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD 159 (250)
T ss_dssp GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence 99999999987635678899999999999999999999999999999865432 24678888887665433
Q ss_pred -------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHH
Q psy616 384 -------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLK 456 (1152)
Q Consensus 384 -------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~ 456 (1152)
.+..+|+++|+++.+|++.++.+.. ..++++.+|++|.. .+.|... ...++++|+.+
T Consensus 160 ~~~~~~~~~~~aY~aSKaal~~l~~~la~el~--~~gI~v~~i~PG~v-~T~m~~~-------------~~~~~~e~~a~ 223 (250)
T d1yo6a1 160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK--DDNVLVVNFCPGWV-QTNLGGK-------------NAALTVEQSTA 223 (250)
T ss_dssp CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG--GGTCEEEEEECCCC---------------------------HHHHH
T ss_pred CcccccchhHHHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEecCCC-CCCCCCC-------------CCCCCHHHHHH
Confidence 3346799999999999999998754 45678999988765 4555321 12477888887
Q ss_pred HHHHHHhc
Q psy616 457 LFEQLLIQ 464 (1152)
Q Consensus 457 ~l~~~l~~ 464 (1152)
.+...+..
T Consensus 224 ~~~~~~~~ 231 (250)
T d1yo6a1 224 ELISSFNK 231 (250)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 77766654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.88 E-value=6.7e-22 Score=220.40 Aligned_cols=236 Identities=17% Similarity=0.080 Sum_probs=185.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+||++|||||++|||+++|+.|+++|++ |++++|+ ...++..+++. ..|.++.+++||++|.++++++++.+.+++|
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga~-Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 102 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 102 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence 6899999999999999999999999985 5555555 44556666664 4478899999999999999999999999999
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||++|||||... ...+.+.+.++|..++.+|+.+.+.+.+...+.+.. ....+.++++||.++..+.+++..|+++
T Consensus 103 ~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~i~~~ss~~~~~~~~~~~~Ysas 179 (294)
T d1w6ua_ 103 HPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK--AQKGAAFLSITTIYAETGSGFVVPSASA 179 (294)
T ss_dssp SCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred ccchhhhhhhhcc-ccccccchhhhhhhheeeecccchhhhhhhhccccc--ccccccccccccchhhhcccccchHHHH
Confidence 9999999999987 788999999999999999999999998888777643 3345678999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc----ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC--
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN----EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD-- 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~----~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~-- 465 (1152)
|+++.+|+++++.+.. ..++++.+|.+|.... .|..... .......+...+ +..+|+|...++..++...
T Consensus 180 Kaal~~ltk~lA~ela--~~gIrVN~I~PG~i~T-~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~ 256 (294)
T d1w6ua_ 180 KAGVEAMSKSLAAEWG--KYGMRFNVIQPGPIKT-KGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYAS 256 (294)
T ss_dssp HHHHHHHHHHHHHHHG--GGTEEEEEEEECCBCC-------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHHHh--HhCeEEEEEccCcccc-chhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence 9999999999988754 4567888998887653 3322111 111112222222 3568999999999888543
Q ss_pred --ceeeeeechhhh
Q psy616 466 --KIQYLVLSGELE 477 (1152)
Q Consensus 466 --~~~~~v~~~~~~ 477 (1152)
..+.+.++|-+.
T Consensus 257 ~itG~~i~vDGG~~ 270 (294)
T d1w6ua_ 257 WINGAVIKFDGGEE 270 (294)
T ss_dssp TCCSCEEEESTTHH
T ss_pred CCCCcEEEECCChh
Confidence 236667776654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=2.4e-21 Score=210.34 Aligned_cols=223 Identities=16% Similarity=0.208 Sum_probs=174.6
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+||++|||||++|||+++|+.|+++|++ |++++|+ +..++..+++ +.+.....+|+.+...++.....+...++.
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFGR 79 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccccc
Confidence 5899999999999999999999999995 5555555 4445544444 667899999999999999999999999999
Q ss_pred eeEEEEcccccCc-----CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhc---CCCCCEEEEecCCccccCCCC
Q psy616 314 IDGVLHIAGISGL-----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQ---KNKLDFVCYFSSSSAILGDFG 385 (1152)
Q Consensus 314 idgvIh~AG~~~~-----~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~---~~~~~~iV~~SS~a~~~g~~g 385 (1152)
+|.+++++++... ..++.+.+.++|++++++|+.|++++.+++.|+|.+.. ....+.||++||+++..|.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~ 159 (248)
T d2o23a1 80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG 159 (248)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCC
Confidence 9999999887541 23556778999999999999999999999999986431 224578999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccccc-chhHHhhcCC--CCCCHHHHHHHHHHHH
Q psy616 386 SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQ-TDFYFKSSKQ--KVLHENDGLKLFEQLL 462 (1152)
Q Consensus 386 ~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~-~~~~~~~~g~--~~l~~~e~~~~l~~~l 462 (1152)
++.|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|.....+. .....+...+ +..+|+|...++..++
T Consensus 160 ~~~Y~asKaal~~lt~~la~e~~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~ 236 (248)
T d2o23a1 160 QAAYSASKGGIVGMTLPIARDLA--PIGIRVMTIAPGLFG-TPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII 236 (248)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECCBC-CC----------CHHHHTCSSSCSCBCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhc--ccCcceeeeccCcee-cchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999998865 456788999988875 4554332222 2222333222 3568999999998877
Q ss_pred hc
Q psy616 463 IQ 464 (1152)
Q Consensus 463 ~~ 464 (1152)
..
T Consensus 237 s~ 238 (248)
T d2o23a1 237 EN 238 (248)
T ss_dssp HC
T ss_pred hC
Confidence 53
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2.5e-21 Score=209.44 Aligned_cols=226 Identities=14% Similarity=0.147 Sum_probs=171.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
++|++|||||++|||+++|+.|+++|+ +|+++.|++ +..+++.+. ..+....+|+.+.+.++. ..+.+++|
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~---~~l~~~~~~-~~~~~~~~d~~~~~~~~~----~~~~~~~i 75 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINE---SKLQELEKY-PGIQTRVLDVTKKKQIDQ----FANEVERL 75 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCH---HHHGGGGGS-TTEEEEECCTTCHHHHHH----HHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHhc-cCCceeeeeccccccccc----cccccccc
Confidence 589999999999999999999999998 566666764 223334333 347788899988766554 45567899
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccc-cCCCCChhhhHHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMGN 393 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~-~g~~g~~~Yaaan 393 (1152)
|++|||||... ..++.+++.++|++++++|+.+++.+.+++.|+|.+. +.+.||++||+++. .+.+++..|+++|
T Consensus 76 d~lVn~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~---~~g~Ii~isS~~~~~~~~~~~~~Y~~sK 151 (245)
T d2ag5a1 76 DVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ---KSGNIINMSSVASSVKGVVNRCVYSTTK 151 (245)
T ss_dssp SEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---TCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred eeEEecccccC-CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC---CCceeeeeechhhccCCccchhHHHHHH
Confidence 99999999988 7889999999999999999999999999999998764 34669999998775 5789999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-------ccchhHHhhcCC-CCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-------EQTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-------~~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++.+|+++++.+.. ..++++.+|.+|... +.|..... .......+...+ +..+|+|..+++..++...
T Consensus 152 aal~~l~r~lA~e~~--~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~ 228 (245)
T d2ag5a1 152 AAVIGLTKSVAADFI--QQGIRCNCVCPGTVD-TPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE 228 (245)
T ss_dssp HHHHHHHHHHHHHHG--GGTEEEEEEEESCEE-CHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhh--hhCcEEEEEeeceee-chhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence 999999999988754 456788999888764 34422110 011122223232 3467899999999888643
Q ss_pred ----ceeeeeechhh
Q psy616 466 ----KIQYLVLSGEL 476 (1152)
Q Consensus 466 ----~~~~~v~~~~~ 476 (1152)
..+.+.+++-+
T Consensus 229 s~~iTG~~i~VDGG~ 243 (245)
T d2ag5a1 229 SAYVTGNPVIIDGGW 243 (245)
T ss_dssp GTTCCSCEEEECTTG
T ss_pred hCCCcCceEEeCCCc
Confidence 23666666654
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.86 E-value=1e-20 Score=209.48 Aligned_cols=234 Identities=12% Similarity=0.008 Sum_probs=169.2
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhC-CCcEEEE-----------------EecCCCH
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKF-NNKAIYI-----------------QVDVSDK 297 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~-g~~v~~~-----------------~~Dvsd~ 297 (1152)
.++|||||++|||+++|+.|+++|+++++...|+.. .+++.+++.+. +..+..+ .+|++++
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 478999999999999999999999976666666643 34556666543 3444444 4569999
Q ss_pred HHHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHH--------------HHHhhhchHHHHHHHHHHHHHHH-
Q psy616 298 LKMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFY--------------SVLSSKISGTIALNYALENTILK- 362 (1152)
Q Consensus 298 ~~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~--------------~~~~~kv~g~~~L~~~~~p~m~~- 362 (1152)
++++++++++.++||+||++|||||+.. ..++.+.+.++|+ .++.+|+.+++++.+.+.+.+..
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 9999999999999999999999999987 6777777666654 57999999999999998887642
Q ss_pred --hcCCCCCEEEEecCCccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc-ccchh
Q psy616 363 --LQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQTDF 439 (1152)
Q Consensus 363 --~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~~~~ 439 (1152)
......+.||+++|..+..+.+++..|+++|+++.+|++.++.+.. ..++++.+|.+|.-. +..... ...+.
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrvN~I~PG~t~---~~~~~~~~~~~~ 236 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA--PLQIRVNGVGPGLSV---LVDDMPPAVWEG 236 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBC---CGGGSCHHHHHH
T ss_pred HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhC--Ccccccccccccccc---ccccCCHHHHHH
Confidence 2234557899999999999999999999999999999999988755 345677777766421 111111 11112
Q ss_pred HHhhcC--CCCCCHHHHHHHHHHHHhcC----ceeeeeechhh
Q psy616 440 YFKSSK--QKVLHENDGLKLFEQLLIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 440 ~~~~~g--~~~l~~~e~~~~l~~~l~~~----~~~~~v~~~~~ 476 (1152)
..+... -+..+|+|..+++..++... ..+.+.++|-+
T Consensus 237 ~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~ 279 (284)
T d1e7wa_ 237 HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 279 (284)
T ss_dssp HHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcCh
Confidence 222221 13458999999999887543 23666677665
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.83 E-value=3.5e-20 Score=199.39 Aligned_cols=208 Identities=12% Similarity=0.036 Sum_probs=158.6
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh--hcCC
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN--NIGP 313 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~--~~G~ 313 (1152)
.|.+|||||++|||+++|+.|+++|+ +|++++|++.. .......+.+|+.+.++.....+.+.. ++|+
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 71 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSAND---------QADSNILVDGNKNWTEQEQSILEQTASSLQGSQ 71 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCT---------TSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchh---------cccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence 45679999999999999999999997 56666666431 123455677899888888877777766 4689
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
||+||||||+.....++.+.+.++|+.++++|+.+++++.++++|+|++ .+.||++||+++..+.+++..|+++|
T Consensus 72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-----~g~Iv~isS~~~~~~~~~~~~Y~asK 146 (235)
T d1ooea_ 72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-----GGLLQLTGAAAAMGPTPSMIGYGMAK 146 (235)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-----ceEEEEeccHHhcCCcccccchHHHH
Confidence 9999999998652345666678899999999999999999999998632 36899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 394 RFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 394 a~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++.+|++.++.+....+.++++.+|.+|... +.|....... ..-....++++..+.+...+..+
T Consensus 147 aal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~-T~~~~~~~~~------~~~~~~~~~~~va~~~~~~l~~~ 211 (235)
T d1ooea_ 147 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLD-TPMNRKWMPN------ADHSSWTPLSFISEHLLKWTTET 211 (235)
T ss_dssp HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBC-CHHHHHHSTT------CCGGGCBCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEecCcCc-CcchhhhCcC------CccccCCCHHHHHHHHHHHhcCc
Confidence 99999999998764323467789999877654 4442211100 01113467888888877666554
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.83 E-value=3.5e-20 Score=199.39 Aligned_cols=209 Identities=13% Similarity=0.070 Sum_probs=161.2
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC--
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG-- 312 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G-- 312 (1152)
++|++|||||++|||+++|+.|+++|+++ +++.+.+.. .......+.+|.++.++++.+...+.+.++
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWV-ASIDVVENE---------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ 70 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEE-EEEESSCCT---------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEE-EEEeCCccc---------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence 47999999999999999999999999854 444444321 123456778899999999888888877654
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHH
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMG 392 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaa 392 (1152)
+||+||||||.......+.+.+.++|++++++|+.+++++.+++.|+|+ +.+.||++||.++..+.++...|+++
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~-----~~G~Iv~isS~~~~~~~~~~~~Y~as 145 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK-----EGGLLTLAGAKAALDGTPGMIGYGMA 145 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE-----EEEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcc-----cccceeEEccHHHcCCccCCcccHHH
Confidence 7999999999765345666777899999999999999999999999863 23789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 393 NRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 393 na~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
|+++.+|++.++.+......++++.+|.+|... +.|......... + -...+|++..+.+..++...
T Consensus 146 Kaal~~lt~~la~El~~~~~gI~vn~v~PG~v~-T~~~~~~~~~~~--~----~~~~~pe~va~~~~~l~s~~ 211 (236)
T d1dhra_ 146 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLD-TPMNRKSMPEAD--F----SSWTPLEFLVETFHDWITGN 211 (236)
T ss_dssp HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEE-CHHHHHHSTTSC--G----GGSEEHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEEEeccCc-CCcchhhCccch--h----hcCCCHHHHHHHHHHHhCCC
Confidence 999999999999874322457899999987664 444221110000 0 12356888888888777543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=3e-19 Score=194.73 Aligned_cols=233 Identities=11% Similarity=0.016 Sum_probs=180.9
Q ss_pred cCCCEEEEECCch--hHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 234 KQGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 234 ~~~~~~LITGg~g--GIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
-++|++|||||++ |||.++|+.|+++|++ |++..|++...+..+++........++.+|+++..++...++++.+.+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 81 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence 3689999999998 8999999999999986 555566655555555655555667889999999999999999999999
Q ss_pred CCeeEEEEcccccCcCcc-----cccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC
Q psy616 312 GPIDGVLHIAGISGLTSN-----ILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 386 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~-----~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~ 386 (1152)
+++|++||||+... ... ......+.|...+..++.+.+.+.+.+.+.|+ +.+.||++||..+..+.+++
T Consensus 82 ~~~d~~v~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Ii~iss~~~~~~~~~~ 155 (258)
T d1qsga_ 82 PKFDGFVHSIGFAP-GDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-----PGSALLTLSYLGAERAIPNY 155 (258)
T ss_dssp SSEEEEEECCCCCC-GGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE-----EEEEEEEEECGGGTSBCTTT
T ss_pred cccceEEEeecccc-cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCcEEEEecchhhccCCCCc
Confidence 99999999998865 222 34667888999999999999999999887642 34569999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc---hhHHhhcCC-CCCCHHHHHHHHHHHH
Q psy616 387 CDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT---DFYFKSSKQ-KVLHENDGLKLFEQLL 462 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~---~~~~~~~g~-~~l~~~e~~~~l~~~l 462 (1152)
..|+++|+++.+|++.++.+.. ..++++.+|.+|... +.|........ ....+...+ +..+|+|...++..++
T Consensus 156 ~~Y~~sKaal~~ltr~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~ 232 (258)
T d1qsga_ 156 NVMGLAKASLEANVRYMANAMG--PEGVRVNAISAGPIR-TLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC 232 (258)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT--TTTEEEEEEEECCCC-CTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhC--ccCceeecccccccc-cccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999998765 567899999988875 34433221111 111222222 3568999999988877
Q ss_pred hcC----ceeeeeechhh
Q psy616 463 IQD----KIQYLVLSGEL 476 (1152)
Q Consensus 463 ~~~----~~~~~v~~~~~ 476 (1152)
... ..+.+.+++-|
T Consensus 233 s~~s~~itG~~i~vDGG~ 250 (258)
T d1qsga_ 233 SDLSAGISGEVVHVDGGF 250 (258)
T ss_dssp SGGGTTCCSCEEEESTTG
T ss_pred CchhcCccCceEEECcCH
Confidence 543 23667777765
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.79 E-value=2.6e-18 Score=181.13 Aligned_cols=194 Identities=8% Similarity=-0.009 Sum_probs=150.8
Q ss_pred CcceeeccccCCCCCCCccccCCceEEEEecCch---hHHHHHHHHccCCcEEEEecCCccccccCCCccEEEcCCChhh
Q psy616 6 NTTKIKVWVKSPLISLPISKVKKNNLLCFSSNKD---FQNKIVESISSYTDIIFIEQSDNIKISPNDTVHYKINKDNIND 82 (1152)
Q Consensus 6 ~~~~~~~W~~~~~~~~~~~~~~~~~~lvf~d~~~---~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~p~~~~d 82 (1152)
.|.|++.|++.+.++. ....++||||.+... +..++.+.|...+.. .+.+.++...+
T Consensus 5 ~~~Y~~~W~p~~~~~~---~~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~-----------------~~~~~~~~~~~ 64 (209)
T d2fr1a2 5 ALRYRIEWRPTGAGEP---ARLDGTWLVAKYAGTADETSTAAREALESAGAR-----------------VRELVVDARCG 64 (209)
T ss_dssp GSEEEEEEEECCCCCC---CCCCSEEEEEECTTSSHHHHHHHHHHHHTTSCE-----------------EEEEECCTTCC
T ss_pred cCcccCcceECCCCCC---CCCCCcEEEEeCCCCchHHHHHHHHHHHhCCCe-----------------EEEecCCCccC
Confidence 5899999999886543 345678999987643 677888888775431 22334445567
Q ss_pred HHHHHHHHHhcCCCcCEEEEeCCCCCcc------cccChHHHHHHHHHHHhCCCCceEEEEEcccccccCCccchhhhHH
Q psy616 83 YTFILNKIYEKDKKIDSVFYLWPLEDKN------CIYNIMPIIYFLQAVKKSKLYLRKLIISGISINKKNEEDLYYCYFN 156 (1152)
Q Consensus 83 ~~~l~~~l~~~~~~~~~iv~lw~~~~~~------~~~~~~~l~~l~qal~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 156 (1152)
+..+.+.+... ..+++|||+|+++... ....+..++.++|++.+.+...+++++|.+.+.+...+....+.++
T Consensus 65 ~~~l~~~~~~~-~~~~~vv~l~~~~~~~~~~~~~~~~~~~~~l~l~qal~~~~~~~~l~~vT~~a~~~~~~d~~~~p~~A 143 (209)
T d2fr1a2 65 RDELAERLRSV-GEVAGVLSLLAVDEAEPEEAPLALASLADTLSLVQAMVSAELGCPLWTVTESAVATGPFERVRNAAHG 143 (209)
T ss_dssp HHHHHHHHTTS-CCCSEEEECTTTTCCCCSSCGGGCHHHHHHHHHHHHHHHTTCCCCEEEEEESCSCSSTTSCCSCGGGH
T ss_pred HHHHHHHhhcc-CCCCeEEEeCCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCcccCCCcccCCHhHH
Confidence 78888777544 5689999999985432 2234688999999999888888899999888877767777788899
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEecCccCcchHHHHHHHHHHhCC-CCceEEEEEcCceEEEEeEeEeccc
Q psy616 157 SWVAFERSLHIIMPETQISIVFAEKITNFNIKNWINILFKELQE-PKLFSIMYYGNDLIRYQLNIKSIIL 225 (1152)
Q Consensus 157 ~~~g~~r~~~~e~p~~~~~~vd~~~~~~~~~~~~~~~l~~el~~-~~~~~va~r~~~~~r~~~~~~~~~~ 225 (1152)
++|||.|+++.|||++++++||++.... ...+..|+.|+.. +.+++|+||+| .||++||++.+.
T Consensus 144 ~l~Gl~r~~~~E~P~l~~~~vDl~~~~~---~~~~~~l~~~l~~~~~E~evAlR~g--~r~v~RL~~~~~ 208 (209)
T d2fr1a2 144 ALWGVGRVIALENPAVWGGLVDVPAGSV---AELARHLAAVVSGGAGEDQLALRAD--GVYGRRWVRAAA 208 (209)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEECTTCC---TTHHHHHHHHHTCSSCCCEEEEETT--EEEEEEEEECCC
T ss_pred hHHHHHHHHHHhCCCceEEEEECCCCCC---hHHHHHHHHHHhcCCCCCEEEEECC--eEEEeeeccCCC
Confidence 9999999999999999999999986543 3446778888864 45789999999 899999998654
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.78 E-value=3.2e-18 Score=184.30 Aligned_cols=225 Identities=16% Similarity=0.167 Sum_probs=168.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+|++|||||++|||+++|+.|+++|++ |++++|++. +.+....++|+++......+.......+ ..+
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~-V~i~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~ 67 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYR-VVVLDLRRE-----------GEDLIYVEGDVTREEDVRRAVARAQEEA-PLF 67 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEESSCC-----------SSSSEEEECCTTCHHHHHHHHHHHHHHS-CEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCcc-----------cccceEeeccccchhhhHHHHHhhhccc-ccc
Confidence 689999999999999999999999985 555565532 3456788999999999999998887765 455
Q ss_pred EEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHh---cCCCCCEEEEecCCccccCCCCChhh
Q psy616 316 GVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKL---QKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 316 gvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~---~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
.+++++++... .......+.+.|+++++.|+.+.+.+.+.+.+.+.+. .....+.||++||+++..|.++++.|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y 147 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 147 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhh
Confidence 56666665431 2344567889999999999999999999999886532 23356789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccc-hhHHhhcCC--CCCCHHHHHHHHHHHHhcC-
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQT-DFYFKSSKQ--KVLHENDGLKLFEQLLIQD- 465 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~-~~~~~~~g~--~~l~~~e~~~~l~~~l~~~- 465 (1152)
+++|+++.+|++.++.+.. ..++++.+|.+|... +.|........ .....+..+ +..+|+|...++..++...
T Consensus 148 ~asKaal~~lt~~lA~ela--~~gIrVN~V~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~~~ 224 (241)
T d1uaya_ 148 AASKGGVVALTLPAARELA--GWGIRVVTVAPGLFD-TPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPM 224 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHG--GGTEEEEEEEECSCS-SHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHh--hcCCceeeecCCccc-ccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhCCC
Confidence 9999999999999998765 456788889888765 33432222211 111222211 2458999999999888754
Q ss_pred -ceeeeeechhh
Q psy616 466 -KIQYLVLSGEL 476 (1152)
Q Consensus 466 -~~~~~v~~~~~ 476 (1152)
..+.+.++|-+
T Consensus 225 iTG~~i~VDGG~ 236 (241)
T d1uaya_ 225 LNGEVVRLDGAL 236 (241)
T ss_dssp CCSCEEEESTTC
T ss_pred CCCCEEEECCcc
Confidence 23666666654
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.78 E-value=3.6e-19 Score=201.10 Aligned_cols=185 Identities=15% Similarity=0.128 Sum_probs=144.0
Q ss_pred CCCEEEEEC--CchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHh--C-----------CCcEEEEE--------
Q psy616 235 QGGTYLITG--GTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKK--F-----------NNKAIYIQ-------- 291 (1152)
Q Consensus 235 ~~~~~LITG--g~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~--~-----------g~~v~~~~-------- 291 (1152)
.+|++|||| +++|||+++|+.|+++|++ |++..+...........+. . ........
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA 79 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCE-EEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhh
Confidence 379999999 6689999999999999995 5555555433322222111 0 11122333
Q ss_pred ------------ecCCCHHHHHHHHHHHHhhcCCeeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHH
Q psy616 292 ------------VDVSDKLKMISEINSIINNIGPIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALEN 358 (1152)
Q Consensus 292 ------------~Dvsd~~~v~~~~~~~~~~~G~idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p 358 (1152)
+|+++.++++++++.+.+.||+||++|||||.... .+++.+++.++|++++++|+.+++.+.|++.|
T Consensus 80 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~ 159 (329)
T d1uh5a_ 80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred cccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence 36678888999999999999999999999997652 35788999999999999999999999999999
Q ss_pred HHHHhcCCCCCEEEEecCCccccCCCC-ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 359 TILKLQKNKLDFVCYFSSSSAILGDFG-SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 359 ~m~~~~~~~~~~iV~~SS~a~~~g~~g-~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
+|+ +.+.||++||.++..+.++ .+.|+++|+++.+|++.+..+.-+ ..++++.+|++|+...
T Consensus 160 ~m~-----~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~-~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 160 IMK-----PQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGR-NYNIRINTISAGPLKS 222 (329)
T ss_dssp GEE-----EEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCCCC
T ss_pred hcc-----cccccccceeehhcccccccchhhhhhhccccccchhhHHHHhc-ccCcEEEEEecCcccc
Confidence 863 2367999999999998887 568999999999999999876421 1367888999887654
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.77 E-value=2.8e-18 Score=188.64 Aligned_cols=234 Identities=14% Similarity=0.057 Sum_probs=173.8
Q ss_pred CCCEEEEECCch--hHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 235 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 235 ~~~~~LITGg~g--GIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
++|++|||||+| |||+++|+.|+++|++ |++++|++..++..+++.+.+....+..+|+++++++.++++++.+.+|
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~-V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGAT-LAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 82 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence 699999999765 9999999999999984 5666777766777788887788888999999999999999999999999
Q ss_pred CeeEEEEcccccCc---CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhh
Q psy616 313 PIDGVLHIAGISGL---TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDY 389 (1152)
Q Consensus 313 ~idgvIh~AG~~~~---~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Y 389 (1152)
++|++|||+|.... ...+.+...+.+...+.....+...+.+...+. ......|+++||.+...+.+++..|
T Consensus 83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~s~~~~~~~~~~~~~y 157 (274)
T d2pd4a1 83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPL-----LNNGASVLTLSYLGSTKYMAHYNVM 157 (274)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-----EEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccc-----cccCcceeeecccccccccccchhh
Confidence 99999999998652 223444566667777777666666666554322 2334567777888878888899999
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc---cchhHHhhc-CCCCCCHHHHHHHHHHHHhcC
Q psy616 390 AMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE---QTDFYFKSS-KQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 390 aaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~---~~~~~~~~~-g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
+++|+++.+|++++..+.. ..++++.+|.+|+... .|...... ......... --+..+|+|...++..+++..
T Consensus 158 ~asK~al~~ltr~lA~e~~--~~GIrvN~I~PG~v~T-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~ 234 (274)
T d2pd4a1 158 GLAKAALESAVRYLAVDLG--KHHIRVNALSAGPIRT-LASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSL 234 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCCCC-TTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHhhHHHhc--CcCceecccccCcccC-ccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChh
Confidence 9999999999999887754 4567888888887754 34322211 111111122 224578999999999888643
Q ss_pred ----ceeeeeechhhh
Q psy616 466 ----KIQYLVLSGELE 477 (1152)
Q Consensus 466 ----~~~~~v~~~~~~ 477 (1152)
..+.+.+++-|.
T Consensus 235 s~~itG~~i~vDGG~~ 250 (274)
T d2pd4a1 235 SSGVSGEVHFVDAGYH 250 (274)
T ss_dssp GTTCCSCEEEESTTGG
T ss_pred hCCCcCceEEECCChh
Confidence 236777787764
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.76 E-value=1e-17 Score=183.12 Aligned_cols=235 Identities=14% Similarity=0.046 Sum_probs=167.5
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhC-CCcEEEEEecCCC----HHHHHHHHHHHHhh
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKF-NNKAIYIQVDVSD----KLKMISEINSIINN 310 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~-g~~v~~~~~Dvsd----~~~v~~~~~~~~~~ 310 (1152)
.|+|||||++|||+++|+.|+++|+.++++..+.+. .+++.+++... +.++.+.++|+.+ ++.+.++++.+.++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 378999999999999999999999955544444333 35566666544 5677777766644 67788889999999
Q ss_pred cCCeeEEEEcccccCcCcccc-----------cCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcC--CCCCEEEEecCC
Q psy616 311 IGPIDGVLHIAGISGLTSNIL-----------EANYKNFYSVLSSKISGTIALNYALENTILKLQK--NKLDFVCYFSSS 377 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~-----------~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~--~~~~~iV~~SS~ 377 (1152)
||+||++|||||+.. ...+. +...+.+...+..++.+.+...+...+.+..... .....++++||.
T Consensus 82 ~g~iDilvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (266)
T d1mxha_ 82 FGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA 160 (266)
T ss_dssp HSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred hCCCCEEEECCccCC-CCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence 999999999999876 33322 2345678888899999998888877766543221 245678899999
Q ss_pred ccccCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCC-C-CCCHHHHH
Q psy616 378 SAILGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQ-K-VLHENDGL 455 (1152)
Q Consensus 378 a~~~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~-~-~l~~~e~~ 455 (1152)
.+..+.+++..|+++|+++.+|++.++.+.. ..++++.+|.+|..... +... ....+...+...+ + ..+|+|..
T Consensus 161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~--~~gIrVN~I~PG~i~t~-~~~~-~~~~~~~~~~~pl~r~~~~peeva 236 (266)
T d1mxha_ 161 MTDLPLPGFCVYTMAKHALGGLTRAAALELA--PRHIRVNAVAPGLSLLP-PAMP-QETQEEYRRKVPLGQSEASAAQIA 236 (266)
T ss_dssp GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESSBSCC-SSSC-HHHHHHHHTTCTTTSCCBCHHHHH
T ss_pred cccccCcchhhhhhhHHHHhhhHHHHHHHhC--ccCcEEEEeccCcEecc-ccCC-HHHHHHHHhcCCCCCCCCCHHHHH
Confidence 9999999999999999999999999988755 34678888888765432 2221 1122222333323 2 25899999
Q ss_pred HHHHHHHhcC----ceeeeeechhh
Q psy616 456 KLFEQLLIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 456 ~~l~~~l~~~----~~~~~v~~~~~ 476 (1152)
.++..+++.. ..+.+.++|-+
T Consensus 237 ~~v~fL~s~~s~~itG~~i~vDGG~ 261 (266)
T d1mxha_ 237 DAIAFLVSKDAGYITGTTLKVDGGL 261 (266)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCchhCCccCCeEEECccH
Confidence 9998888643 33566666654
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.72 E-value=2.1e-17 Score=183.78 Aligned_cols=235 Identities=11% Similarity=0.047 Sum_probs=160.8
Q ss_pred CCCEEEEECCch--hHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhC----------C--Cc-EEEEEec------
Q psy616 235 QGGTYLITGGTG--RLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKF----------N--NK-AIYIQVD------ 293 (1152)
Q Consensus 235 ~~~~~LITGg~g--GIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~----------g--~~-v~~~~~D------ 293 (1152)
++|++|||||+| |||+++|+.|+++|++ |++..|+.........++.. + .. -....+|
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~-Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAE-ILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP 85 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcccc
Confidence 689999999875 9999999999999985 55666654333222222211 1 11 1233343
Q ss_pred --------------CCCHHHHHHHHHHHHhhcCCeeEEEEcccccCc-CcccccCCHHHHHHHHhhhchHHHHHHHHHHH
Q psy616 294 --------------VSDKLKMISEINSIINNIGPIDGVLHIAGISGL-TSNILEANYKNFYSVLSSKISGTIALNYALEN 358 (1152)
Q Consensus 294 --------------vsd~~~v~~~~~~~~~~~G~idgvIh~AG~~~~-~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p 358 (1152)
.++...++++++++.++||+||++|||||.... ..++.+.+.++|++++++|+.+.+.+.+++.|
T Consensus 86 ~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 165 (297)
T d1d7oa_ 86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP 165 (297)
T ss_dssp GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred ccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHH
Confidence 245567789999999999999999999997531 45789999999999999999999999999887
Q ss_pred HHHHhcCCCCCEEEEecCCccc-cCCCCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccc--
Q psy616 359 TILKLQKNKLDFVCYFSSSSAI-LGDFGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNE-- 435 (1152)
Q Consensus 359 ~m~~~~~~~~~~iV~~SS~a~~-~g~~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~-- 435 (1152)
+|. ..+.++.++|.++. ...++...|+++|+++.++++.+..+... ..++++.+|.+|... +.|......
T Consensus 166 ~~~-----~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~-~~gIrvN~I~PG~i~-T~~~~~~~~~~ 238 (297)
T d1d7oa_ 166 IMN-----PGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGR-KQNIRVNTISAGPLG-SRAAKAIGFID 238 (297)
T ss_dssp GEE-----EEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCCB-CCCSSCCSHHH
T ss_pred Hhh-----cCCcceeeeehhhcccccccccceecccccccccccccchhccc-cceEEeccccccccc-chhhhhccCCH
Confidence 642 22345555555544 45578889999999999999887665321 235688888887664 344332211
Q ss_pred -cchhHHhhcCC-CCCCHHHHHHHHHHHHhcC----ceeeeeechhhh
Q psy616 436 -QTDFYFKSSKQ-KVLHENDGLKLFEQLLIQD----KIQYLVLSGELE 477 (1152)
Q Consensus 436 -~~~~~~~~~g~-~~l~~~e~~~~l~~~l~~~----~~~~~v~~~~~~ 477 (1152)
..+...+...+ +..+|+|...++..+++.. ..|.+.++|-+.
T Consensus 239 ~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s 286 (297)
T d1d7oa_ 239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN 286 (297)
T ss_dssp HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHh
Confidence 11112222222 3568999999988877532 236677777664
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.70 E-value=2e-16 Score=173.02 Aligned_cols=232 Identities=12% Similarity=0.113 Sum_probs=167.3
Q ss_pred cCCCEEEEEC--CchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 234 KQGGTYLITG--GTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL-KKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 234 ~~~~~~LITG--g~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l-~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
-++|++|||| |++|||+++|+.|+++|+ +|+++.|+.. +..+++ +..+.++..+.||+++++++..+++.+.+.
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~--~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~ 80 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRL--RLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA 80 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCH--HHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChH--HHHHHHHHHcCCceeeEeeecccccccccccchhhhc
Confidence 4689999999 567999999999999998 4666666642 233333 345778889999999999999999988766
Q ss_pred ---cCCeeEEEEcccccCc----CcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC
Q psy616 311 ---IGPIDGVLHIAGISGL----TSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD 383 (1152)
Q Consensus 311 ---~G~idgvIh~AG~~~~----~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~ 383 (1152)
+++||++|||||.... ...+.+.+.++|.+.+..++...+.+.+...++ . ....+++++|.....+.
T Consensus 81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~i~~~s~~~~~~~ 154 (268)
T d2h7ma1 81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI---M---NPGGSIVGMDFDPSRAM 154 (268)
T ss_dssp HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG---E---EEEEEEEEEECCCSSCC
T ss_pred cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh---c---ccccccccccccccccC
Confidence 4689999999997531 335678899999999999999999888886543 1 22335666777788888
Q ss_pred CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccc------ccccccc------chhHHhhc--CCCCC
Q psy616 384 FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKF------KIGNNEQ------TDFYFKSS--KQKVL 449 (1152)
Q Consensus 384 ~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm------~~~~~~~------~~~~~~~~--g~~~l 449 (1152)
++...|+++|+++.+|+++++.+.. ..++++.+|.+|......+ ....... .+...++. +-+.-
T Consensus 155 p~~~~y~~sK~a~~~ltr~lA~e~~--~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~ 232 (268)
T d2h7ma1 155 PAYNWMTVAKSALESVNRFVAREAG--KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMK 232 (268)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTT
T ss_pred cccchhhccccchhhccccchhhhh--ccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999988754 4567888888887653211 0000000 00111122 22355
Q ss_pred CHHHHHHHHHHHHhcC----ceeeeeechhh
Q psy616 450 HENDGLKLFEQLLIQD----KIQYLVLSGEL 476 (1152)
Q Consensus 450 ~~~e~~~~l~~~l~~~----~~~~~v~~~~~ 476 (1152)
+|+|..+++..+++.. ..+.+.+++-+
T Consensus 233 ~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~ 263 (268)
T d2h7ma1 233 DATPVAKTVCALLSDWLPATTGDIIYADGGA 263 (268)
T ss_dssp CCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred CHHHHHHHHHHHhCchhcCccCCEEEECcCc
Confidence 7999999988877432 23666666654
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.54 E-value=5.4e-14 Score=152.24 Aligned_cols=211 Identities=16% Similarity=0.095 Sum_probs=140.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc-CCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI-GPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~-G~id 315 (1152)
|++|||||++|||+++|+.|+++|++ |++++|++. -..+|+++....+....++..+. +.+|
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~-V~~~~~~~~----------------~~~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQ-IVGIDIRDA----------------EVIADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSS----------------SEECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECChH----------------HHHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 78999999999999999999999996 444454431 03579999999888877666554 5799
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc-----------------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS----------------- 378 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a----------------- 378 (1152)
++|||||+.. . .+.|..++..+..+...+.+...+.+.+ ...+.+.++++..
T Consensus 65 ~lv~~Ag~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (257)
T d1fjha_ 65 GLVLCAGLGP-Q-------TKVLGNVVSVNYFGATELMDAFLPALKK---GHQPAAVVISSVASAHLAFDKNPLALALEA 133 (257)
T ss_dssp EEEECCCCCT-T-------CSSHHHHHHHHTHHHHHHHHHHHHHHHT---SSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred EEEEcCCCCC-c-------HHHHHHHHHHHHHHHHHHHHHhhhhhhh---hccCcceeeeeccccchhhhhhhhhhhccC
Confidence 9999999755 2 1347788899999999999998887643 2334455544432
Q ss_pred ----------cccCC-CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCcccccccc---ccchhHHhh-
Q psy616 379 ----------AILGD-FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN---EQTDFYFKS- 443 (1152)
Q Consensus 379 ----------~~~g~-~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~---~~~~~~~~~- 443 (1152)
+..+. ++...|+++|+++.+|+++++.+.. ..++++.+|.+|... +.|..... .......+.
T Consensus 134 g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~--~~gIrVN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~ 210 (257)
T d1fjha_ 134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG--EAGVRLNTIAPGATE-TPLLQAGLQDPRYGESIAKFV 210 (257)
T ss_dssp TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH--HTTCEEEEEEECC----------------------CC
T ss_pred CcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccc--cccccccccccCCcC-ChhHHhhcCCHHHHHHHHhcC
Confidence 22222 2456799999999999999987754 345688888877664 33422111 111111111
Q ss_pred cCC-CCCCHHHHHHHHHHHHhcC----ceeeeeechhhhH
Q psy616 444 SKQ-KVLHENDGLKLFEQLLIQD----KIQYLVLSGELEK 478 (1152)
Q Consensus 444 ~g~-~~l~~~e~~~~l~~~l~~~----~~~~~v~~~~~~~ 478 (1152)
..+ +..+|+|...++..+++.. ..+.+.++|-+..
T Consensus 211 ~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta 250 (257)
T d1fjha_ 211 PPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250 (257)
T ss_dssp CSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence 111 2457999999998877543 2467778887754
|
| >d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Peptidyl carrier domain domain: Peptidyl carrier protein (PCP), thioester domain species: Bacillus brevis [TaxId: 1393]
Probab=99.37 E-value=2.3e-13 Score=117.77 Aligned_cols=70 Identities=16% Similarity=0.249 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHH
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFI 574 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~ 574 (1152)
..+++.|.++|+++||++ .|+++++|+++|+|||+++++.++|+++|+++++++++|+|||+++||+||.
T Consensus 6 ~~~E~~l~~i~~~vL~~~--~i~~~~~f~~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~~i~ 75 (76)
T d2gdwa1 6 NAVESKLAEIWERVLGVS--GIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVA 75 (76)
T ss_dssp SHHHHHHHHHHHHHTTSS--CCCTTTTSSTTTCTTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCCC--CCCCCCCHHHcCCChHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHhc
Confidence 457888999999999985 5899999999999999999999999999999999999999999999999984
|
| >d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP species: Streptomyces coelicolor, A3(2) [TaxId: 1902]
Probab=99.34 E-value=3.4e-13 Score=119.69 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNN 579 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~~ 579 (1152)
+.+.+.|++.+++.+|+++++|+.+.+|++||+|||++++|..+|+++||++||++.+|+|||+++|++|+.+++.+
T Consensus 8 d~l~~~l~e~~~~~~g~~~~~i~~d~~f~dlG~DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~i~~~l~~ 84 (86)
T d2af8a_ 8 DDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAE 84 (86)
T ss_dssp HHHHHHHHHTTCCCSCCCCSSCSCSSSHHHHTCSSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccccCCCccccccCCCHHHcCCCHHHHHHHHHHHHHHHccCcCHHHHHcCCCHHHHHHHHHHHhhc
Confidence 44666777777778889999999999999999999999999999999999999999999999999999999887654
|
| >d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Thermotoga maritima [TaxId: 2336]
Probab=99.28 E-value=2.1e-12 Score=114.63 Aligned_cols=77 Identities=16% Similarity=0.251 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHN 578 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~ 578 (1152)
++.+.+.++++++++|++++++|+++.+|++||+|||++++|...|+++||++|+...+|+++|+++|++||.+++.
T Consensus 6 ~~~i~~~l~~iv~~~l~~~~~~i~~~~~~~dlG~DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~i~~~~~ 82 (85)
T d1vkua_ 6 RKKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLE 82 (85)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHhcCcchHHHHHHHHHHHHccCCCCHHHHHHcCCHHHHHHHHHHHHh
Confidence 34577889999999999999999999999999999999999999999999999999999999999999999988764
|
| >d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Oxytetracycline polyketide synthase acyl carrier species: Streptomyces rimosus [TaxId: 1927]
Probab=99.27 E-value=1.4e-12 Score=118.02 Aligned_cols=77 Identities=10% Similarity=0.062 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhhhh
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNHNN 579 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~~~ 579 (1152)
+.+.+.+++.+++.+++++++|..+.+|++||+|||++++|..+|+++||++|++..+|+||||++|++||.+++..
T Consensus 7 d~l~~~lre~~~~~~~~~~~~i~~d~~f~dlG~DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~l~~~l~~ 83 (95)
T d1nq4a_ 7 SDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLTG 83 (95)
T ss_dssp HHHHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHhCCChhhcccCCCHHHcCCcHHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHHHHhccC
Confidence 34667788888889999999999999999999999999999999999999999999999999999999999887643
|
| >d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.21 E-value=1.1e-11 Score=116.44 Aligned_cols=76 Identities=22% Similarity=0.279 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHhh
Q psy616 502 EKFIENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKNH 577 (1152)
Q Consensus 502 ~~~~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~~ 577 (1152)
.+.+.+.|+++|+++||+++++|+.+.+|+ +||+|||++++|...|+++||++|+.+.+|+|+||.+|++||.+..
T Consensus 5 ~~~i~~~l~~iv~~~l~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~le~~f~i~i~~~~~~~~~Tv~~l~~~l~~~~ 81 (115)
T d1klpa_ 5 QEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLE 81 (115)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCccccCcccchhhhcccchhHHHHHHHHHHHHHCCCCCHHHHHhCccHHHHHHHHHHHh
Confidence 456788899999999999999999999997 6999999999999999999999999999999999999999997654
|
| >d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP species: Streptomyces roseofulvus [TaxId: 33902]
Probab=99.21 E-value=2.8e-12 Score=112.39 Aligned_cols=70 Identities=19% Similarity=0.284 Sum_probs=61.4
Q ss_pred HHHHHHHHHHhCCCCc---ccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 507 NDIKNHICNILNTKKS---EIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 507 ~~l~~~ia~~L~~~~~---~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+.|++++++.+|.... +++.+.+|++||+|||++++|+.+|+++||++||++.+|+|||+++|++|+...
T Consensus 6 e~l~~il~e~~g~~~~~~~~~d~d~~f~dlG~DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~v~~~ 78 (82)
T d1or5a_ 6 DDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTT 78 (82)
T ss_dssp HHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCcccccCCCcCcCHHHcCCChHhHHHHHHHHHHHHhCcCCHHHHHcCCCHHHHHHHHHhc
Confidence 4577888888886422 467789999999999999999999999999999999999999999999998654
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.20 E-value=6.4e-13 Score=137.11 Aligned_cols=149 Identities=14% Similarity=0.077 Sum_probs=102.0
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
++|++|||||+||||+++|+.|+++|+ +|++++|+ +..++..+++... .++....+|++|.++++++ +++
T Consensus 22 ~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~-------~~~ 92 (191)
T d1luaa1 22 KGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEA-------VKG 92 (191)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHH-------TTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHH-------hcC
Confidence 689999999999999999999999998 56666776 4445555555443 2345688999999887765 467
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc-CCCCChhhhHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL-GDFGSCDYAMG 392 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~-g~~g~~~Yaaa 392 (1152)
+|+||||||+.. ..++.++|+.++..|+.+.+++...+.+. .. ........+++..++- ...|...|+++
T Consensus 93 iDilin~Ag~g~-----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~g~~~~g~~~y~~s 163 (191)
T d1luaa1 93 AHFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLGIG---GI-DATDKGKEYGGKRAFGALGIGGLKLKLH 163 (191)
T ss_dssp CSEEEECCCTTC-----CCBCHHHHHTCTTCCEEEECCCSSSCSBT---TC-CTTCEEEEETTEEEECHHHHHHHHHHHH
T ss_pred cCeeeecCcccc-----ccCCHHHHHhhhcceeehhHhhHHHHHHH---hh-hhccCcEEecceEEEeccCcCcHHHHHH
Confidence 999999998632 35689999999999998887765442211 11 1112233333322211 01244579999
Q ss_pred HHHHHHHHH
Q psy616 393 NRFQTVYAK 401 (1152)
Q Consensus 393 na~l~~la~ 401 (1152)
|+++..+.+
T Consensus 164 k~a~~~l~~ 172 (191)
T d1luaa1 164 RACIAKLFE 172 (191)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHHh
Confidence 998876653
|
| >d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Type I fatty acid synthase ACP domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.15 E-value=5e-12 Score=109.13 Aligned_cols=66 Identities=26% Similarity=0.278 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhCC-CCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHH
Q psy616 507 NDIKNHICNILNT-KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYF 573 (1152)
Q Consensus 507 ~~l~~~ia~~L~~-~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L 573 (1152)
+.|.+.|+++||+ ++++|+++++|++||+|||++++|+++|+++||++|++++||+ +|+.+|++..
T Consensus 7 ~~l~~~va~~Lgi~~~~~I~~~~~f~~lG~DSl~a~el~~~i~~~~g~~l~~~~l~~-~Ti~~L~el~ 73 (76)
T d2pnga1 7 RDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQ-LTLRKLQEMS 73 (76)
T ss_dssp CCGGGTHHHHHTCSSCTTSCSSSCHHHHTCSSHHHHHHHHHHHHHTCCCCCHHHHTT-CCSHHHHHTS
T ss_pred HHHHHHHHHHhccCCHhhCCCCCCHHHhCCcHHHHHHHHHHHHHHhCCCCCHHHHHH-hhHHHHHHHH
Confidence 3467889999999 5789999999999999999999999999999999999999885 9999998753
|
| >d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: apo-D-alanyl carrier protein domain: apo-D-alanyl carrier protein species: Lactobacillus casei [TaxId: 1582]
Probab=99.13 E-value=3.9e-11 Score=104.73 Aligned_cols=73 Identities=18% Similarity=0.263 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCccccC-CchHHHHHHHHHHHHhcCcccCceecc--cCCCHHHHHHHHHH
Q psy616 503 KFIENDIKNHICNILNTKKSEIYKNKNLADYG-FDSISLAEFSRILSKFYSLDIMPSIFF--SYSTLERLITYFIK 575 (1152)
Q Consensus 503 ~~~~~~l~~~ia~~L~~~~~~i~~~~~f~elG-lDSL~aveL~~~l~~~fgv~L~~~~lf--~~~Ti~~La~~L~~ 575 (1152)
+.+++.+.+++++++|.++..|+++.+|+++| +|||++++|..+|+++||+++|+++++ +++|+++|++|+.+
T Consensus 3 e~I~~~v~~il~~~l~~~~~~i~~d~~l~e~gglDSl~~vel~~~ie~~fgi~i~~~~l~~~~~~Tv~~l~~~v~~ 78 (80)
T d1dv5a_ 3 EAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQ 78 (80)
T ss_dssp HHHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhccchhhcCCCccccccCCCCHHHHHHHHHHHHHHHCCCCCHHHhhHHhCCCHHHHHHHHHH
Confidence 45788999999999999999999999999986 799999999999999999999999999 88999999999965
|
| >d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Hypothetical protein Atu2571 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.12 E-value=3e-11 Score=106.35 Aligned_cols=73 Identities=7% Similarity=0.146 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhCC--CCcccccCCCccccCCchHHHHHHHHHHHHhcCcccCceeccc--CCCHHHHHHHHHHhhh
Q psy616 506 ENDIKNHICNILNT--KKSEIYKNKNLADYGFDSISLAEFSRILSKFYSLDIMPSIFFS--YSTLERLITYFIKNHN 578 (1152)
Q Consensus 506 ~~~l~~~ia~~L~~--~~~~i~~~~~f~elGlDSL~aveL~~~l~~~fgv~L~~~~lf~--~~Ti~~La~~L~~~~~ 578 (1152)
++.+++.+++++++ ++++|+++++|++||+|||++++|..+|+++||+++|...+|+ +|||.+|++|+.+...
T Consensus 2 ~e~i~~il~~~~~l~~~~~~i~~~~~f~dlG~DSl~~~~l~~~le~~f~v~i~~~~l~~~~~~Ti~~la~~i~~~~~ 78 (83)
T d2jq4a1 2 NATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLILD 78 (83)
T ss_dssp HHHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCHHHcCCCCCHHHHhCccHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 45688899998765 7788999999999999999999999999999999999999996 5999999999977653
|
| >d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Bacillus subtilis [TaxId: 1423]
Probab=99.11 E-value=2.6e-11 Score=104.18 Aligned_cols=69 Identities=14% Similarity=0.259 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHH
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYF 573 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L 573 (1152)
+.+.+++++++.|++++++|+++.+|. +||+|||++++|...|+++||++||...+++++|+++|++|+
T Consensus 4 v~~~v~~iia~~l~~~~~~i~~~~~~~~DlG~DSl~~vel~~~le~~f~i~i~~~~~~~~~Tv~~l~~~i 73 (74)
T d1f80d_ 4 TLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYI 73 (74)
T ss_dssp HHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHC
T ss_pred HHHHHHHHHHHHHCcCHHHcCCCccHHHhcCccHhHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHH
Confidence 567899999999999999999999997 699999999999999999999999999999999999999986
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.04 E-value=1.1e-09 Score=123.68 Aligned_cols=166 Identities=19% Similarity=0.160 Sum_probs=111.7
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-----hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-----NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-----~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
|++|||||+|=||..++++|.++|..++.+..+... .+...........++.++.+|++|.+++++++...
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---- 77 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence 789999999999999999999999855555443221 11222222233567999999999999999988764
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 384 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------- 384 (1152)
.+|.|||+|+... .. . +.++-...+++|+.|+.+|.+++.. ..-.....||++||.+ ++|.+
T Consensus 78 -~~d~v~h~aa~~~-~~-~---~~~~~~~~~~~Nv~gt~nllea~~~----~~~~~~~r~i~~SS~~-vYG~~~~~~~~E 146 (357)
T d1db3a_ 78 -QPDEVYNLGAMSH-VA-V---SFESPEYTADVDAMGTLRLLEAIRF----LGLEKKTRFYQASTSE-LYGLVQEIPQKE 146 (357)
T ss_dssp -CCSEEEECCCCCT-TT-T---TTSCHHHHHHHHTHHHHHHHHHHHH----TTCTTTCEEEEEEEGG-GGTTCCSSSBCT
T ss_pred -CCCEEEEeecccc-cc-h---hhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCCcEEEEEEchh-hhCCCCCCCcCC
Confidence 5899999999865 21 1 1233455789999999999998642 2222334688888854 33321
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCc
Q psy616 385 -----GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPL 423 (1152)
Q Consensus 385 -----g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~ 423 (1152)
....|+.+|...+.+++..++. ++ +.+.+..+.
T Consensus 147 ~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~l------~~~ilR~~~ 185 (357)
T d1db3a_ 147 TTPFYPRSPYAVAKLYAYWITVNYRESYGM------YACNGILFN 185 (357)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECC
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHhCC------CEEEEEecc
Confidence 2467999999999988876654 33 666666543
|
| >d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Escherichia coli [TaxId: 562]
Probab=98.98 E-value=3.5e-10 Score=97.74 Aligned_cols=72 Identities=25% Similarity=0.332 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCcc-ccCCchHHHHHHHHHHHHhcCcccCceecccCCCHHHHHHHHHHh
Q psy616 505 IENDIKNHICNILNTKKSEIYKNKNLA-DYGFDSISLAEFSRILSKFYSLDIMPSIFFSYSTLERLITYFIKN 576 (1152)
Q Consensus 505 ~~~~l~~~ia~~L~~~~~~i~~~~~f~-elGlDSL~aveL~~~l~~~fgv~L~~~~lf~~~Ti~~La~~L~~~ 576 (1152)
+++.+++++++.+++++++|.++.+|. +||+|||+.++|...|+++||+++|...+++.+|+++|++|+.++
T Consensus 3 I~~~v~~iia~~l~i~~~~i~~~~~l~~dLg~DSl~~~el~~~iE~~f~i~i~~~~~~~~~Tv~dlv~~i~~~ 75 (77)
T d1t8ka_ 3 IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 75 (77)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHcCCCCcchhccccchhHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHc
Confidence 567899999999999999999999997 699999999999999999999999999999999999999999765
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.93 E-value=1e-08 Score=117.05 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=119.4
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEe--cCC--------------cchHHHHHHHHh-CCCcEEEEEecCCCHH
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILS--GRS--------------KLNSIIYKKLKK-FNNKAIYIQVDVSDKL 298 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~--~R~--------------~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~ 298 (1152)
|+.+|||||+|=||..++++|+++|..++++. .|+ ....+....++. .+.++.++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 56799999999999999999999998766652 111 111222222322 2567899999999999
Q ss_pred HHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc
Q psy616 299 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 378 (1152)
Q Consensus 299 ~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a 378 (1152)
.++++++.. .+|.|||.|+... ......+.+.....+.+|+.|+.++.+++... ....+++++||..
T Consensus 81 ~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~------~~~~~~i~~ss~~ 147 (393)
T d1i24a_ 81 FLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF------GEECHLVKLGTMG 147 (393)
T ss_dssp HHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH------CTTCEEEEECCGG
T ss_pred HHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHh------ccccceeeccccc
Confidence 999988764 6999999998754 34455677778889999999999999986432 2334566666654
Q ss_pred cccCC------------------------CCChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCccc
Q psy616 379 AILGD------------------------FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 379 ~~~g~------------------------~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 425 (1152)
..... .....|+.+|.+.+.+++...++ ++ +.+.+.++..-
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l------~~~~lR~~~v~ 213 (393)
T d1i24a_ 148 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGI------RATDLNQGVVY 213 (393)
T ss_dssp GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEE
T ss_pred cccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccce------eeeeccccccc
Confidence 43211 11235999999999888765543 33 67777765443
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=98.93 E-value=4.7e-09 Score=117.42 Aligned_cols=164 Identities=17% Similarity=0.228 Sum_probs=111.8
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecC--Cc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGR--SK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R--~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
.+|||||+|=||..+++.|+++|..++++..- .. ......+.+. ..++.++++|++|.+.+.++++.. .+
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~-----~~ 74 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDH-----AI 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence 38999999999999999999999866555321 11 1112222232 346888999999999988887752 58
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC----------
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF---------- 384 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~---------- 384 (1152)
|.|||+|+... . . .+.++-...+++|+.|+.++.+++... ....||++||.+...+..
T Consensus 75 d~ViHlAa~~~-~-~---~~~~~~~~~~~~Nv~gt~nlL~~~~~~-------~v~~~i~~Ss~~vy~~~~~~~~~e~~~~ 142 (338)
T d1udca_ 75 DTVIHFAGLKA-V-G---ESVQKPLEYYDNNVNGTLRLISAMRAA-------NVKNFIFSSSATVYGDQPKIPYVESFPT 142 (338)
T ss_dssp SEEEECCSCCC-H-H---HHHHCHHHHHHHHHHHHHHHHHHHHHH-------TCCEEEEEEEGGGGCSCCSSSBCTTSCC
T ss_pred CEEEECCCccc-h-h---hHHhCHHHHHHhHHHHHHHHHHHHHHh-------CCCEEEecCcceEEcccccccccccccc
Confidence 99999998643 1 1 122334578899999999999986432 456788888876553221
Q ss_pred --CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 385 --GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 --g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
....|+.+|...+.+........ ...+.+.+.++.+
T Consensus 143 ~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v 180 (338)
T d1udca_ 143 GTPQSPYGKSKLMVEQILTDLQKAQ----PDWSIALLRYFNP 180 (338)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHS----TTCEEEEEEECEE
T ss_pred CCCcchHHHHHhhhhHHHHHHHhhc----cCCeEEEEeeccE
Confidence 25679999999998877544331 1235555554443
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.86 E-value=6.6e-09 Score=116.60 Aligned_cols=150 Identities=19% Similarity=0.193 Sum_probs=105.9
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHH--HHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSII--YKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~--~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
|++|||||+|=||..++++|+++|..++++..-+ ...+.. ...+. ..++.++.+|++|.++++.++... .
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~-----~ 74 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEY-----K 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhcc-----C
Confidence 7899999999999999999999998655543211 111221 22222 345778899999999998887642 6
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC----------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD---------- 383 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~---------- 383 (1152)
+|.|||+|+... . ... .+.-.....+|+.|+.+|.+++... ....||++||...+-..
T Consensus 75 ~d~VihlAa~~~-~-~~~---~~~~~~~~~~N~~~t~~ll~~~~~~-------~i~~~i~~SS~~vyg~~~~~~~~~~~~ 142 (347)
T d1z45a2 75 IDSVIHFAGLKA-V-GES---TQIPLRYYHNNILGTVVLLELMQQY-------NVSKFVFSSSATVYGDATRFPNMIPIP 142 (347)
T ss_dssp CCEEEECCSCCC-H-HHH---HHSHHHHHHHHHHHHHHHHHHHHHH-------TCCEEEEEEEGGGGCCGGGSTTCCSBC
T ss_pred CCEEEEcccccc-c-ccc---ccCcccccccchhhhHHHHHHHHhc-------ccceEEeecceeeecCcccCCCCCccc
Confidence 999999998654 1 121 2233457789999999999996432 45579999996644211
Q ss_pred -----CCChhhhHHHHHHHHHHHHHHh
Q psy616 384 -----FGSCDYAMGNRFQTVYAKYLNN 405 (1152)
Q Consensus 384 -----~g~~~Yaaana~l~~la~~~~~ 405 (1152)
.....|+.+|...+.+.+...+
T Consensus 143 e~~~~~p~~~Y~~sK~~~E~~~~~~~~ 169 (347)
T d1z45a2 143 EECPLGPTNPYGHTKYAIENILNDLYN 169 (347)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCChhHhHHHHHHHHHHHHHH
Confidence 1245699999999998877654
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.84 E-value=2.8e-08 Score=112.58 Aligned_cols=218 Identities=15% Similarity=0.132 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccc---ccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAI---NTA 794 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tv---dta 794 (1152)
-.-|..+++.+||++||+++++++ -++++++. ++. .+ ..+..|...||++...... ..|
T Consensus 92 ~~~la~~Aa~~aL~~ag~~~~dId----~lI~~t~t-~~~--------~P-----~~a~~v~~~LGl~~~~~~~~~~~~g 153 (372)
T d1teda_ 92 AVPLAVDVSKRALAGLPYRAAEIG----LLVLATST-GFI--------AP-----GVDVAIVKELGLSPSISRVVVNFMG 153 (372)
T ss_dssp HHHHHHHHHHHHHTTCCCCGGGEE----EEEEEESS-CCC--------SS-----CHHHHHHHHHTCCTTCEEEEEESCG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccC-CCC--------Cc-----hHHHHHHhhhccCCceeEeeccccC
Confidence 446899999999999999887764 33444332 322 11 2466799999998754433 258
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccchhh
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSRAL 874 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~A~ 874 (1152)
|++++.||..|...|++|..+-+||.++++... .+-..+. ++.....+.+|+|+++++|++-....
T Consensus 154 C~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~----------~~~~~d~----~~~~~~~~lfGDGAaA~ll~~~~~~~ 219 (372)
T d1teda_ 154 CAAAMNALGTATNYVRAHPAMKALVVCIELCSV----------NAVFADD----INDVVIHSLFGDGCAALVIGASQVQE 219 (372)
T ss_dssp GGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGG----------GCCCCSS----HHHHHHHHHBCEEEEEEEEEEECTTS
T ss_pred ccHHHHHHHHHHHHHhcCCCccceeeeehhhcc----------cccCCCc----chhhhhhhhhcccceeEEeccCCccc
Confidence 999999999999999999999999999986321 0000110 00011234689999999998654432
Q ss_pred cCCCceEEEEEEEEEec-CCCC---------CCC---CCCC-----HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy616 875 SDGDPIHAIIRGSGINY-DGKT---------NGI---TAPN-----GISQTELIKSVYKKSNLNPEDINYIITHGTGTKL 936 (1152)
Q Consensus 875 ~dgd~i~avI~g~a~~~-dG~~---------~~~---~~P~-----~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~ 936 (1152)
. ....+..+.+..... .+.. .++ ..+. .....++++++|+++|++++||+|+-.|-.+...
T Consensus 220 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i 298 (372)
T d1teda_ 220 K-LEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI 298 (372)
T ss_dssp C-CCTTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH
T ss_pred c-cCCceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhccCccHHH
Confidence 2 222334445443221 1110 011 1111 4456788999999999999999999999776543
Q ss_pred CCHHHHHHHHHHhcccCCCCCceee-eccCCCCCccccchh
Q psy616 937 GDPVEINALHDVFKNKTYNQKFCAI-TSNKSNIGHTFAASG 976 (1152)
Q Consensus 937 gD~~E~~al~~~f~~~~~~~~~~~i-gsvKsniGH~~~AaG 976 (1152)
. +.+.+.++-...+ +.. -.+-.+.||+.+|+=
T Consensus 299 ~-----~~i~~~Lgl~~ek---~~~s~~~l~~~GN~~sasi 331 (372)
T d1teda_ 299 I-----EQSVRSLGISAEL---AAQSWDVLARFGNMLSVSL 331 (372)
T ss_dssp H-----HHHHHHHTCCGGG---GHHHHHHHHHHCBCTHHHH
T ss_pred H-----HHHHHHcCCCHHH---hhhhHHHHhccCCcHHHHH
Confidence 3 3344555432211 111 011234588876653
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=98.84 E-value=1.1e-08 Score=113.48 Aligned_cols=150 Identities=19% Similarity=0.244 Sum_probs=106.7
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEec--CCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSG--RSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~--R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+|||||+|=||..+++.|.++|..++++.. +... ......+.. ..++.++.+|++|.+.+.++++.. ++|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~-~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~-----~~d 74 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA-TDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPD 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH-HHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccc-hhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhc-----CCc
Confidence 4899999999999999999999986655532 2222 223333433 346889999999999998888764 589
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-----------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----------- 384 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~----------- 384 (1152)
.|||+|+... . ....++-...+++|+.|+.+|.+++... +...+|++||.+...+..
T Consensus 75 ~Vih~aa~~~-~----~~~~~~~~~~~~~Nv~gt~nll~~~~~~-------~~~~~i~~sS~~~~~~~~~~~~~~~~~~~ 142 (338)
T d1orra_ 75 SCFHLAGQVA-M----TTSIDNPCMDFEINVGGTLNLLEAVRQY-------NSNCNIIYSSTNKVYGDLEQYKYNETETR 142 (338)
T ss_dssp EEEECCCCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHHHHH-------CTTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred eEEeeccccc-c----cccccChHHHHHHHHHHHHHHHHhhhcc-------ccccccccccccccccccccccccccccc
Confidence 9999998754 1 1123345678899999999999985432 334466677766554432
Q ss_pred -----------------CChhhhHHHHHHHHHHHHHHhc
Q psy616 385 -----------------GSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 385 -----------------g~~~Yaaana~l~~la~~~~~~ 406 (1152)
....|+.+|...+.+.......
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~ 181 (338)
T d1orra_ 143 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARI 181 (338)
T ss_dssp EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCcccCCccccccccccccchhhhhhhhhhhc
Confidence 3467899999988887765543
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=98.80 E-value=1.1e-08 Score=114.69 Aligned_cols=167 Identities=19% Similarity=0.113 Sum_probs=111.8
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHH--HhCCCcEEEEEecCCCHHHHHHHHHHH
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIYKKL--KKFNNKAIYIQVDVSDKLKMISEINSI 307 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~-~~~~~~l--~~~g~~v~~~~~Dvsd~~~v~~~~~~~ 307 (1152)
..+.+|+++|||||+|=||..++++|.++|..++.+ .|+... ..+.... .........+..|++|.+++.+++
T Consensus 6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~-vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--- 81 (342)
T d1y1pa1 6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGT-ARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI--- 81 (342)
T ss_dssp CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT---
T ss_pred CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEE-eCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc---
Confidence 356789999999999999999999999999855544 455322 2222211 122334456778999987765544
Q ss_pred HhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC--
Q psy616 308 INNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG-- 385 (1152)
Q Consensus 308 ~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g-- 385 (1152)
-.+|.|+|+|+... . ..+. ...+.+|+.|+.++.+++. +......||++||+.+..+...
T Consensus 82 ----~~~~~v~~~a~~~~-~----~~~~---~~~~~~nv~gt~~ll~~~~------~~~~v~~~i~~SS~~~~~~~~~~~ 143 (342)
T d1y1pa1 82 ----KGAAGVAHIASVVS-F----SNKY---DEVVTPAIGGTLNALRAAA------ATPSVKRFVLTSSTVSALIPKPNV 143 (342)
T ss_dssp ----TTCSEEEECCCCCS-C----CSCH---HHHHHHHHHHHHHHHHHHH------TCTTCCEEEEECCGGGTCCCCTTC
T ss_pred ----ccchhhhhhccccc-c----cccc---cccccchhhhHHHHHHhhh------cccccccccccccceeeccCCCCC
Confidence 35899999998654 1 2223 3456789999999998853 2334678999999765443211
Q ss_pred -----------------------------ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCC
Q psy616 386 -----------------------------SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWP 422 (1152)
Q Consensus 386 -----------------------------~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg 422 (1152)
...|+.+|...+.++....+.. +.+...++|..+
T Consensus 144 ~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~~i~p~ 206 (342)
T d1y1pa1 144 EGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN---KPHFTLNAVLPN 206 (342)
T ss_dssp CCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH---CCSSEEEEEEES
T ss_pred CCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhc---ccccccceeccc
Confidence 1359999999998887655432 234466666543
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=98.77 E-value=2.4e-08 Score=110.12 Aligned_cols=147 Identities=16% Similarity=0.097 Sum_probs=106.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.|.+|||||+|=||..++++|+++|..++++..|++ +|+.|.+.+..++..- .+|
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------------~~~~~~~~~~~~~~~~-----~~d 56 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------------LNLLDSRAVHDFFASE-----RID 56 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------------CCTTCHHHHHHHHHHH-----CCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------------ccccCHHHHHHHHhhc-----CCC
Confidence 357999999999999999999999987666554432 5899999988877542 689
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-----------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----------- 384 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~----------- 384 (1152)
.|||+|+... .... ........+..|+.|+.+|.+++.. .....||++||.+.+-+..
T Consensus 57 ~v~~~a~~~~-~~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~-------~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~ 125 (315)
T d1e6ua_ 57 QVYLAAAKVG-GIVA---NNTYPADFIYQNMMIESNIIHAAHQ-------NDVNKLLFLGSSCIYPKLAKQPMAESELLQ 125 (315)
T ss_dssp EEEECCCCCC-CHHH---HHHCHHHHHHHHHHHHHHHHHHHHH-------TTCCEEEEECCGGGSCTTCCSSBCGGGTTS
T ss_pred EEEEcchhcc-cccc---chhhHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEECCceEcCCCCCCCccCCcccc
Confidence 9999997754 2222 2233445677899999999988532 3456799999977543211
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcc
Q psy616 385 -----GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 -----g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 424 (1152)
.+..|+.+|.+.+.+++...++ ++ +++.+..+.+
T Consensus 126 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl------~~~ilR~~~v 165 (315)
T d1e6ua_ 126 GTLEPTNEPYAIAKIAGIKLCESYNRQYGR------DYRSVMPTNL 165 (315)
T ss_dssp SCCCGGGHHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CEEEEeeccE
Confidence 1346999999999998876544 44 6677765443
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.74 E-value=2.2e-08 Score=113.02 Aligned_cols=173 Identities=16% Similarity=0.131 Sum_probs=117.3
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchH--HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNS--IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~--~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+|||||+|=||..++++|++.|..+++++.+..... .....+ ....++.++.+|++|...+.++++.. .+|
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d 75 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY-----QPD 75 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence 4799999999999999999999998777665532111 111111 11346889999999999998887653 699
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHh--cCCCCCEEEEecCCccccCC----------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKL--QKNKLDFVCYFSSSSAILGD---------- 383 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~--~~~~~~~iV~~SS~a~~~g~---------- 383 (1152)
.|||+|+... . ..+.++-..++++|+.|+.++.+++...-.+. .......||+.||....-..
T Consensus 76 ~VihlAa~~~-~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~ 150 (361)
T d1kewa_ 76 AVMHLAAESH-V----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV 150 (361)
T ss_dssp EEEECCSCCC-H----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred EEEECccccc-h----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence 9999998644 1 11223345688999999999999876542110 00123468888886643111
Q ss_pred -----------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 384 -----------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 384 -----------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
.....|+.+|...+.++....... +.+++++..+.+-+
T Consensus 151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~-----~i~~~~lR~~~vyG 199 (361)
T d1kewa_ 151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY-----GLPTIVTNCSNNYG 199 (361)
T ss_dssp CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECEEES
T ss_pred CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-----CCCEEEEecCceEC
Confidence 113459999999999998766542 23677777665543
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.72 E-value=6.9e-08 Score=99.65 Aligned_cols=186 Identities=14% Similarity=0.088 Sum_probs=112.1
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
.+.++||||+|.||.++++.|+++|.. |.++.|++..- ... ....+.++.+|++|.+++.++++ ..|
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~-V~~~~R~~~~~---~~~--~~~~~~~~~gD~~d~~~l~~al~-------~~d 69 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYE-VTVLVRDSSRL---PSE--GPRPAHVVVGDVLQAADVDKTVA-------GQD 69 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCGGGS---CSS--SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCE-EEEEEcChhhc---ccc--cccccccccccccchhhHHHHhc-------CCC
Confidence 467999999999999999999999974 55555553210 011 12346789999999988877654 479
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC----hhhhH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS----CDYAM 391 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~----~~Yaa 391 (1152)
.|||++|... ... .. ..+..++.++.+++. .....+||++||.......... ..|..
T Consensus 70 ~vi~~~g~~~-~~~--~~---------~~~~~~~~~l~~aa~-------~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~ 130 (205)
T d1hdoa_ 70 AVIVLLGTRN-DLS--PT---------TVMSEGARNIVAAMK-------AHGVDKVVACTSAFLLWDPTKVPPRLQAVTD 130 (205)
T ss_dssp EEEECCCCTT-CCS--CC---------CHHHHHHHHHHHHHH-------HHTCCEEEEECCGGGTSCTTCSCGGGHHHHH
T ss_pred EEEEEeccCC-chh--hh---------hhhHHHHHHHHHHHH-------hcCCCeEEEEeeeeccCCCccccccccccch
Confidence 9999998754 221 11 123346666666632 2356679999987654433222 23444
Q ss_pred HHHHHHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhhcCCCCCCHHHHHHHHHHHHhcC
Q psy616 392 GNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKSSKQKVLHENDGLKLFEQLLIQD 465 (1152)
Q Consensus 392 ana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~~g~~~l~~~e~~~~l~~~l~~~ 465 (1152)
.+...+ +.++..++ +++.|..+.+.+.... +. .... .-.......++.++.++++..++..+
T Consensus 131 ~~~~~e---~~l~~~~~------~~tiirp~~~~~~~~~-~~-~~~~-~~~~~~~~~i~~~DvA~~~~~~l~~~ 192 (205)
T d1hdoa_ 131 DHIRMH---KVLRESGL------KYVAVMPPHIGDQPLT-GA-YTVT-LDGRGPSRVISKHDLGHFMLRCLTTD 192 (205)
T ss_dssp HHHHHH---HHHHHTCS------EEEEECCSEEECCCCC-SC-CEEE-SSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred HHHHHH---HHHHhcCC------ceEEEecceecCCCCc-cc-EEEe-eCCCCCCCcCCHHHHHHHHHHHhCCC
Confidence 444443 33444544 7888877655432211 10 0000 00112234578899988888887654
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.68 E-value=1e-07 Score=106.36 Aligned_cols=168 Identities=18% Similarity=0.161 Sum_probs=115.4
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-----hCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLK-----KFNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~-----~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
..|++|||||+|-||..++++|.++|..++.+...+.........++ .....+.++.+|..|.......
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~------ 88 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA------ 88 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH------
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccc------
Confidence 45799999999999999999999999866665543322222222221 1124688999999997765432
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-----
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----- 384 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~----- 384 (1152)
....+.++|.+.... . ..+.++....+..|+.|+.+|.+++.. .+...||++||.+.+-..+
T Consensus 89 -~~~~~~v~~~~a~~~-~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~-------~~~~~~i~~SS~~vyg~~~~~~~~ 155 (341)
T d1sb8a_ 89 -CAGVDYVLHQAALGS-V----PRSINDPITSNATNIDGFLNMLIAARD-------AKVQSFTYAASSSTYGDHPGLPKV 155 (341)
T ss_dssp -HTTCSEEEECCSCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHH-------TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred -ccccccccccccccc-c----cccccCccchhheeehhHHHHHHHHHh-------cCCceEEEcccceeeCCCCCCCcc
Confidence 235788888886543 1 224566777899999999999998642 3456799999876542221
Q ss_pred ------CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 385 ------GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 ------g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+.+|...+.+++...+.. +.+++.+..+.+-+
T Consensus 156 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~ilR~~~v~G 198 (341)
T d1sb8a_ 156 EDTIGKPLSPYAVTKYVNELYADVFSRCY-----GFSTIGLRYFNVFG 198 (341)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHH-----CCCCEEEEECCEEC
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHh-----CCCeEEEEeceeec
Confidence 23789999999999988766542 23666676655543
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.68 E-value=5e-08 Score=107.68 Aligned_cols=152 Identities=16% Similarity=0.093 Sum_probs=104.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
|++|||||+|-||..++++|.++|..++.+..+... .....+.+. ...++.++.+|++|...+.+.+... ..+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~ 74 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----QPQ 74 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence 579999999999999999999999866555544422 122222232 2246899999999999988887764 567
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-----------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF----------- 384 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~----------- 384 (1152)
.++|+|+... ..... +.....+..|+.|+.++.+++... ....+|+++|| +...|..
T Consensus 75 ~~~~~a~~~~--~~~~~---~~~~~~~~~n~~g~~~~l~~~~~~------~~~~~~i~~Ss-~~~~~~~~~~~~~E~~~~ 142 (321)
T d1rpna_ 75 EVYNLAAQSF--VGASW---NQPVTTGVVDGLGVTHLLEAIRQF------SPETRFYQAST-SEMFGLIQAERQDENTPF 142 (321)
T ss_dssp EEEECCSCCC--HHHHT---TSHHHHHHHHTHHHHHHHHHHHHH------CTTSEEEEEEE-GGGGCSCSSSSBCTTSCC
T ss_pred cccccccccc--ccccc---cchHHHHhhhhhchHHHHHHHHHh------CCCcccccccc-hhhcCcccCCCCCCCCCc
Confidence 8888887644 11112 223567889999999999886432 23334555555 4444322
Q ss_pred -CChhhhHHHHHHHHHHHHHHhc
Q psy616 385 -GSCDYAMGNRFQTVYAKYLNNK 406 (1152)
Q Consensus 385 -g~~~Yaaana~l~~la~~~~~~ 406 (1152)
.+..|+.+|.+.+.++...+..
T Consensus 143 ~p~~~Y~~sK~~~E~~~~~~~~~ 165 (321)
T d1rpna_ 143 YPRSPYGVAKLYGHWITVNYRES 165 (321)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cccChhHHHHHHHHHHHHHHHhh
Confidence 3578999999999998876543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.65 E-value=1.7e-07 Score=104.49 Aligned_cols=165 Identities=16% Similarity=0.129 Sum_probs=109.3
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-----hHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-----NSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-----~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
|++|||||+|=||..++++|.++|..++.+..+... .+.+..... .....+.++.+|++|.+.+..++...
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 78 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence 456999999999999999999999866666554321 111111111 12346899999999999999888764
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------ 384 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------ 384 (1152)
.++.++|+|+... . ....+.....+++|+.|+.++.+++.. ....+..+||++||.+ ++|.+
T Consensus 79 --~~~~v~~~~a~~~-~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~~~~i~~SS~~-vyg~~~~~~~~ 146 (347)
T d1t2aa_ 79 --KPTEIYNLGAQSH-V----KISFDLAEYTADVDGVGTLRLLDAVKT----CGLINSVKFYQASTSE-LYGKVQEIPQK 146 (347)
T ss_dssp --CCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHH----TTCTTTCEEEEEEEGG-GTCSCSSSSBC
T ss_pred --ccceeeeeeeccc-c----chhhccchhhhhhHHHHHHHHHHHHHH----cCCCCCcEEEEecchh-eecCCCCCCCC
Confidence 5778888887643 1 112333445678999999999988543 2223345788888854 34421
Q ss_pred ------CChhhhHHHHHHHHHHHHHHh-cccccCCCceEEEEeCC
Q psy616 385 ------GSCDYAMGNRFQTVYAKYLNN-KNIYKKYTNKLITINWP 422 (1152)
Q Consensus 385 ------g~~~Yaaana~l~~la~~~~~-~g~~~~~~~~~~si~wg 422 (1152)
....|+.+|.+.+.++....+ .++ +++.+..+
T Consensus 147 E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~~------~~~ilr~~ 185 (347)
T d1t2aa_ 147 ETTPFYPRSPYGAAKLYAYWIVVNFREAYNL------FAVNGILF 185 (347)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CEEEEEec
Confidence 245799999999999887543 333 56655543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.60 E-value=2.8e-07 Score=102.81 Aligned_cols=165 Identities=14% Similarity=0.156 Sum_probs=110.4
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecC-----C-cchHHHHHHHH-hCCCcEEEEEecCCCHHHHHHHHHHHHh
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGR-----S-KLNSIIYKKLK-KFNNKAIYIQVDVSDKLKMISEINSIIN 309 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R-----~-~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 309 (1152)
|.+|||||+|=||.+++++|+++|..++++... + .......+.+. ....++.++.+|++|.+.+.+++..
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--- 79 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--- 79 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence 578999999999999999999999877776431 1 11111222222 1245688999999999998887754
Q ss_pred hcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC------
Q psy616 310 NIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------ 383 (1152)
Q Consensus 310 ~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~------ 383 (1152)
..++.++|+|+... . .. +.++-...++.|+.|+.++.+++. ......|+++||.......
T Consensus 80 --~~~~~i~h~Aa~~~-~-~~---~~~~p~~~~~~Nv~gt~~l~~~~~-------~~~v~~~i~~ss~~~~~~~~~~~~~ 145 (346)
T d1ek6a_ 80 --YSFMAVIHFAGLKA-V-GE---SVQKPLDYYRVNLTGTIQLLEIMK-------AHGVKNLVFSSSATVYGNPQYLPLD 145 (346)
T ss_dssp --CCEEEEEECCSCCC-H-HH---HHHCHHHHHHHHHHHHHHHHHHHH-------HTTCCEEEEEEEGGGGCSCSSSSBC
T ss_pred --cccccccccccccC-c-Hh---hHhCHHHHHHhhhcccccccchhh-------hcCcccccccccceeeecccccccc
Confidence 36899999998754 1 11 223345678999999999998853 2345668887776543221
Q ss_pred ------CCChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCC
Q psy616 384 ------FGSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWP 422 (1152)
Q Consensus 384 ------~g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg 422 (1152)
.....|+.+|.+.+..++...+.. ...+.+.+..+
T Consensus 146 ~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~----~~~~~~~lR~~ 186 (346)
T d1ek6a_ 146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQAD----KTWNAVLLRYF 186 (346)
T ss_dssp TTSCCCCCSSHHHHHHHHHHHHHHHHHHHC----TTCEEEEEEEC
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHhc----cCCceEEEeec
Confidence 123469999999988777554321 12355555443
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=98.56 E-value=4.6e-07 Score=102.55 Aligned_cols=170 Identities=17% Similarity=0.218 Sum_probs=114.1
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEec---CC-------cchHHHHHHHHhC--------CCcEEEEEecCCCHH
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSG---RS-------KLNSIIYKKLKKF--------NNKAIYIQVDVSDKL 298 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~---R~-------~~~~~~~~~l~~~--------g~~v~~~~~Dvsd~~ 298 (1152)
-.+|||||+|=||..++++|++++...|+.+. ++ ...+.....+... ...+.++.+|++|.+
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~ 82 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence 35899999999999999999976444555442 11 2223333333321 235788999999999
Q ss_pred HHHHHHHHHHhhcCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc
Q psy616 299 KMISEINSIINNIGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSS 378 (1152)
Q Consensus 299 ~v~~~~~~~~~~~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a 378 (1152)
.++++++. +.++|.|||+|+... .. ...+.....+..|+.|+.++.+++. ......++++||.+
T Consensus 83 ~l~~~~~~----~~~~d~ViH~Aa~~~-~~----~~~~~~~~~~~~N~~~t~~~l~~~~-------~~~~~~~~~~~s~~ 146 (383)
T d1gy8a_ 83 FLNGVFTR----HGPIDAVVHMCAFLA-VG----ESVRDPLKYYDNNVVGILRLLQAML-------LHKCDKIIFSSSAA 146 (383)
T ss_dssp HHHHHHHH----SCCCCEEEECCCCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHH-------HTTCCEEEEEEEGG
T ss_pred Hhhhhhhc----cceeehhhccccccc-cc----ccccccccccccccccccccchhhh-------ccCCcccccccccc
Confidence 88887754 467999999998754 21 1223345677899999999998853 23445566666654
Q ss_pred cccCC------------------CCChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcccCcc
Q psy616 379 AILGD------------------FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNNSK 428 (1152)
Q Consensus 379 ~~~g~------------------~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~~G 428 (1152)
..... .....|+.+|...+.+++..... ++ +++++..+.+-+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl------~~~~lR~~~vyG~~ 209 (383)
T d1gy8a_ 147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGI------KGICLRYFNACGAH 209 (383)
T ss_dssp GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECEEECCC
T ss_pred cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCC------CEEEEecceeeccC
Confidence 43211 12467999999999999876553 44 77777766554433
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=98.56 E-value=2.5e-07 Score=103.38 Aligned_cols=156 Identities=19% Similarity=0.171 Sum_probs=104.8
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
|-++|.+|||||+|=||..+++.|.++|..+.++..+........+.. .....+.++.+|++|++.+.+++...
T Consensus 5 ~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~----- 78 (356)
T d1rkxa_ 5 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF----- 78 (356)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred hhCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc-----
Confidence 346899999999999999999999999986554443333222222222 22235788999999999988877654
Q ss_pred CeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC--------
Q psy616 313 PIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-------- 384 (1152)
Q Consensus 313 ~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-------- 384 (1152)
.+|.|+|+|+... . ..+.+.....+.+|+.|+.++.+++... ....+++..||.....+..
T Consensus 79 ~~~~v~~~aa~~~-~----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~------~~~~~~~~~s~~~~~~~~~~~~~~~~~ 147 (356)
T d1rkxa_ 79 QPEIVFHMAAQPL-V----RLSYSEPVETYSTNVMGTVYLLEAIRHV------GGVKAVVNITSDKCYDNKEWIWGYREN 147 (356)
T ss_dssp CCSEEEECCSCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHHH------CCCCEEEEECCGGGBCCCCSSSCBCTT
T ss_pred hhhhhhhhhcccc-c----cccccCCccccccccccchhhhhhhhcc------ccccccccccccccccccccccccccc
Confidence 6889999998654 1 1223445668889999999999986432 2333455544443332211
Q ss_pred ----CChhhhHHHHHHHHHHHHHHh
Q psy616 385 ----GSCDYAMGNRFQTVYAKYLNN 405 (1152)
Q Consensus 385 ----g~~~Yaaana~l~~la~~~~~ 405 (1152)
....|+..|...+.+....+.
T Consensus 148 ~~~~p~~~y~~~k~~~e~~~~~~~~ 172 (356)
T d1rkxa_ 148 EAMGGYDPYSNSKGCAELVTSSYRN 172 (356)
T ss_dssp SCBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCccccccccchhhhhHHhh
Confidence 234588888888777665443
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.56 E-value=1e-07 Score=99.68 Aligned_cols=205 Identities=15% Similarity=0.053 Sum_probs=120.8
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~-~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
-+++|||||+|.||.++++.|+++|.. +++...|++.. .......+.++.+|+++.+.+.++++ .+
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~ 69 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG------KEKIGGEADVFIGDITDADSINPAFQ-------GI 69 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHH------HHHTTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHH------HHhccCCcEEEEeeeccccccccccc-------cc
Confidence 368999999999999999999999975 45556676521 22334567789999999988776653 57
Q ss_pred eEEEEcccccCcCc--------ccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCC
Q psy616 315 DGVLHIAGISGLTS--------NILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGS 386 (1152)
Q Consensus 315 dgvIh~AG~~~~~~--------~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~ 386 (1152)
|.|||+|+...... .........+.....+|+.|+.++....... ..+.+...|+..........
T Consensus 70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~s~~~~~~~~~~~ 142 (252)
T d2q46a1 70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-------GVKHIVVVGSMGGTNPDHPL 142 (252)
T ss_dssp SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-------TCSEEEEEEETTTTCTTCGG
T ss_pred eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-------cccccccccccccCCCCccc
Confidence 99999998643110 0111122334556678889998888764432 34567777776654443332
Q ss_pred hhhhHHHHHHHH-H-HHHHHhcccccCCCceEEEEeCCcccCcccccccc-ccchhHHhhcCCCCCCHHHHHHHHHHHHh
Q psy616 387 CDYAMGNRFQTV-Y-AKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNN-EQTDFYFKSSKQKVLHENDGLKLFEQLLI 463 (1152)
Q Consensus 387 ~~Yaaana~l~~-l-a~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~-~~~~~~~~~~g~~~l~~~e~~~~l~~~l~ 463 (1152)
..|...+..... . ..+....+ .+++.+.++.+-+.+...... ..........+...++.++.++++..+|.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~ 216 (252)
T d2q46a1 143 NKLGNGNILVWKRKAEQYLADSG------TPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALL 216 (252)
T ss_dssp GGGGGCCHHHHHHHHHHHHHHSS------SCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTT
T ss_pred ccccccchhhhhhhhhhhhhccc------ccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhC
Confidence 222222211111 1 12222333 367777766554432211100 00111122334456888999999988887
Q ss_pred cCc
Q psy616 464 QDK 466 (1152)
Q Consensus 464 ~~~ 466 (1152)
.+.
T Consensus 217 ~~~ 219 (252)
T d2q46a1 217 FEE 219 (252)
T ss_dssp CGG
T ss_pred Ccc
Confidence 653
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.55 E-value=4.7e-07 Score=100.34 Aligned_cols=170 Identities=18% Similarity=0.088 Sum_probs=110.5
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-----hHHHHHHHHh-CCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-----NSIIYKKLKK-FNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-----~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
|++|||||+|=||..++++|.++|..++.+..+... ...+...... ....+.++.+|+++.+.+.+.++..
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--- 78 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 78 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence 789999999999999999999999865555543221 1111111111 1346889999999999998888753
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------ 384 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------ 384 (1152)
.+|.|||+|+... . ....+.-...+..|+.|+.++..++.....+. .....++..||. ...+..
T Consensus 79 --~~D~Vih~Aa~~~-~----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~~~~ss~-~~~~~~~~~~~E 148 (339)
T d1n7ha_ 79 --KPDEVYNLAAQSH-V----AVSFEIPDYTADVVATGALRLLEAVRSHTIDS--GRTVKYYQAGSS-EMFGSTPPPQSE 148 (339)
T ss_dssp --CCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH--CCCCEEEEEEEG-GGGTTSCSSBCT
T ss_pred --ccchhhhcccccc-c----cccccCccccccccccccchhhhhhhhccccc--ccceeeeecccc-eecccCCCCCCC
Confidence 7999999998754 1 11234455688899999999988865432211 122234444443 322221
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 385 -----GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 -----g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
-...|+.+|.+-+.++....+.. +.+++.+..+.+
T Consensus 149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v 188 (339)
T d1n7ha_ 149 TTPFHPRSPYAASKCAAHWYTVNYREAY-----GLFACNGILFNH 188 (339)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHH-----CCEEEEEEECCE
T ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHh-----CCCEEEEEEccc
Confidence 25689999999999887665541 237777766444
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=98.52 E-value=3.1e-07 Score=102.17 Aligned_cols=160 Identities=13% Similarity=0.053 Sum_probs=105.8
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
.+|||||+|=||..++++|+++|...|+.+.+. +.... +. ...++.++.+|+++.+++.+.+. + .+|.
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~----~~-~~~~~~~i~~Di~~~~~~~~~~~---~---~~d~ 70 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FL-NHPHFHFVEGDISIHSEWIEYHV---K---KCDV 70 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG----GT-TCTTEEEEECCTTTCSHHHHHHH---H---HCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhh----hc-cCCCeEEEECccCChHHHHHHHH---h---CCCc
Confidence 489999999999999999999996566655443 22111 11 13568999999998766544322 2 4899
Q ss_pred EEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCC-----------
Q psy616 317 VLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFG----------- 385 (1152)
Q Consensus 317 vIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g----------- 385 (1152)
|||+|+... .. ...++-...+..|+.|+.++.+++.. ... .+++.||.....+...
T Consensus 71 Vih~a~~~~-~~----~~~~~~~~~~~~nv~gt~~ll~~~~~-------~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~ 137 (342)
T d2blla1 71 VLPLVAIAT-PI----EYTRNPLRVFELDFEENLRIIRYCVK-------YRK-RIIFPSTSEVYGMCSDKYFDEDHSNLI 137 (342)
T ss_dssp EEECBCCCC-HH----HHHHSHHHHHHHHTHHHHHHHHHHHH-------TTC-EEEEECCGGGGBTCCCSSBCTTTCCCB
T ss_pred ccccccccc-cc----ccccCCcccccccccccccccccccc-------ccc-ccccccccccccccccccccccccccc
Confidence 999999755 21 12233456788999999999998532 222 3455566554332211
Q ss_pred -------ChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 386 -------SCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 386 -------~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
...|+.+|...+.++....+.. +.+.+.+..+.+-.
T Consensus 138 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~i~r~~~~~g 180 (342)
T d2blla1 138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE-----GLQFTLFRPFNWMG 180 (342)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECSEEC
T ss_pred ccccCCCcchhhhcccchhhhhhhhhccc-----CceeEEeecccccc
Confidence 2569999999999887765542 22666666665543
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=4.7e-07 Score=95.09 Aligned_cols=137 Identities=13% Similarity=0.031 Sum_probs=94.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYS-TNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga-~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++++|||||+|-||.++++.|.++|. ..|++++|++..... .....+....+|+.+.+++ .+.+..
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-----~~~~~i~~~~~D~~~~~~~-------~~~~~~ 80 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-----EAYKNVNQEVVDFEKLDDY-------ASAFQG 80 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-----GGGGGCEEEECCGGGGGGG-------GGGGSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-----cccceeeeeeecccccccc-------cccccc
Confidence 468999999999999999999999985 467777775432110 1123456667788775433 344556
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHH
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGN 393 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaan 393 (1152)
.|.+||++|... ..........+++.++.++.+++. ..+...||++||...... ....|+.+|
T Consensus 81 ~d~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~-------~~~v~~fi~~Ss~~~~~~--~~~~Y~~~K 143 (232)
T d2bkaa1 81 HDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAK-------AGGCKHFNLLSSKGADKS--SNFLYLQVK 143 (232)
T ss_dssp CSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHH-------HTTCCEEEEECCTTCCTT--CSSHHHHHH
T ss_pred cccccccccccc--------cccchhhhhhhcccccceeeeccc-------ccCccccccCCccccccC--ccchhHHHH
Confidence 899999998643 122344556788999999988853 235678999998766432 345699999
Q ss_pred HHHHHHH
Q psy616 394 RFQTVYA 400 (1152)
Q Consensus 394 a~l~~la 400 (1152)
...+...
T Consensus 144 ~~~E~~l 150 (232)
T d2bkaa1 144 GEVEAKV 150 (232)
T ss_dssp HHHHHHH
T ss_pred HHhhhcc
Confidence 8777544
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.42 E-value=6.9e-07 Score=100.19 Aligned_cols=162 Identities=12% Similarity=0.022 Sum_probs=110.7
Q ss_pred cCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 234 KQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 234 ~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++..+|||||+|=||..++++|.++|..++++..++.... ...-....+..+|+.+.+.+.++++ .
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVTE-------G 79 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHHT-------T
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHhh-------c
Confidence 35677999999999999999999999986666654432210 0011234577789999877655442 5
Q ss_pred eeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC---------
Q psy616 314 IDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF--------- 384 (1152)
Q Consensus 314 idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~--------- 384 (1152)
+|.|||+|+... ..... .+.....+.+|+.|+.++..++.. .....||++||....-...
T Consensus 80 ~d~Vih~a~~~~-~~~~~---~~~~~~~~~~n~~gt~~ll~~~~~-------~~vk~~i~~SS~~~~~~~~~~~~~~~~~ 148 (363)
T d2c5aa1 80 VDHVFNLAADMG-GMGFI---QSNHSVIMYNNTMISFNMIEAARI-------NGIKRFFYASSACIYPEFKQLETTNVSL 148 (363)
T ss_dssp CSEEEECCCCCC-CHHHH---TTCHHHHHHHHHHHHHHHHHHHHH-------TTCSEEEEEEEGGGSCGGGSSSSSSCEE
T ss_pred CCeEeecccccc-ccccc---ccccccccccccchhhHHHHhHHh-------hCcccccccccccccccccccccccccc
Confidence 899999998765 22221 223456788999999999998532 3556799999966542111
Q ss_pred ---------CChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCccc
Q psy616 385 ---------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWN 425 (1152)
Q Consensus 385 ---------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~ 425 (1152)
-...|+.+|...+.+++...+. ++ +++.+..+..-
T Consensus 149 ~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl------~~~ilR~~~vy 193 (363)
T d2c5aa1 149 KESDAWPAEPQDAFGLEKLATEELCKHYNKDFGI------ECRIGRFHNIY 193 (363)
T ss_dssp CGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECCEE
T ss_pred ccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCC------CEEEEEeeeEe
Confidence 1357999999999998876554 43 66666654443
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=98.38 E-value=3.3e-07 Score=91.63 Aligned_cols=120 Identities=11% Similarity=0.086 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcccccccchh
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVMAINTACSS 797 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~tvdtaCsS 797 (1152)
..-+..+++.+||++||+++++++ -+++.+..+++.. ...+.+|...||.+.+.+-|..+|++
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~~dId----lli~~s~t~~~~~-------------p~~a~~v~~~Lg~~~~~~di~~~C~g 111 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGALEGVD----AVIVATNTPDALF-------------PDTAALVQARFGLKAFAYDLLAGCPG 111 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTEE----EEEEECSSCSEEE-------------SCHHHHHHHHTTCCCEEEEEECSTTH
T ss_pred ccHHHHHHHHHHHhhcCcccccce----EEEEecccccccc-------------cchHHHHHHHhccCccceeehhcccc
Confidence 456788899999999999988875 4555554433211 22466788889999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccch
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLSR 872 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~~ 872 (1152)
.+.||+.|...+++|....+|+.+++... ..+.+ +......++|+|++++||++.++
T Consensus 112 ~~~al~~a~~~~~~~~~~~~Lvv~~e~~S-----------~~~~~-------~d~~~~~lfGDgAaA~ll~~~~~ 168 (172)
T d1ub7a1 112 WIYALAQAHALVEAGLAQKVLAVGAEALS-----------KIIDW-------NDRATAVLFGDGGGAAVVGKVRE 168 (172)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEECGG-----------GTSCT-------TCHHHHTTBCCEEEEEEEECCCT
T ss_pred HHHHHHHHhhhhhcCCcceeEEecccccc-----------cccCC-------CCcCeEEEecceeEEEEEEEcCC
Confidence 99999999999999999999999998631 12222 22234567899999999987653
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=98.36 E-value=8e-07 Score=97.99 Aligned_cols=164 Identities=15% Similarity=0.129 Sum_probs=108.5
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCc-----EEEEecCC--cchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYST-----NLILSGRS--KLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~-----~vil~~R~--~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.+|||||+|=||..++++|+++|.. +++...+. .........+ ....++.++.+|.++.......
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~------- 73 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLARE------- 73 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHH-------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhcc-------
Confidence 4799999999999999999999863 33332211 1111111111 2345789999999998765532
Q ss_pred cCCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC------
Q psy616 311 IGPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------ 384 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------ 384 (1152)
.-..|.|||+|+... .. ...+.....+.+|+.|+++|.+++.. .....||++||.+..-...
T Consensus 74 ~~~~d~vi~~a~~~~-~~----~~~~~~~~~~~~N~~gt~~ll~~~~~-------~~~~~~I~~Ss~~~yg~~~~~~~~E 141 (322)
T d1r6da_ 74 LRGVDAIVHFAAESH-VD----RSIAGASVFTETNVQGTQTLLQCAVD-------AGVGRVVHVSTNQVYGSIDSGSWTE 141 (322)
T ss_dssp TTTCCEEEECCSCCC-HH----HHHHCCHHHHHHHTHHHHHHHHHHHH-------TTCCEEEEEEEGGGGCCCSSSCBCT
T ss_pred ccccceEEeeccccc-cc----ccccchHHHhhhhHHHHHHHHHHHHH-------cCCceEEEeecceeecCCCCCCCCC
Confidence 236899999998754 21 22333455678999999999998642 2446788888866543221
Q ss_pred -----CChhhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcccC
Q psy616 385 -----GSCDYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 385 -----g~~~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w~~ 426 (1152)
....|+.+|...+.+++...++. +.+++.+..+..-+
T Consensus 142 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~lR~~~vyG 183 (322)
T d1r6da_ 142 SSPLEPNSPYAASKAGSDLVARAYHRTY-----GLDVRITRCCNNYG 183 (322)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEECEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHh-----CCCEEEEEeeeEEC
Confidence 23579999999999988766542 23667776655443
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.35 E-value=7e-07 Score=98.18 Aligned_cols=156 Identities=17% Similarity=0.117 Sum_probs=101.5
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
|.+|||||+|=||..++++|.++|..++.+..... ..+.. ... ....++.....|+.+ ..+..+|
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~-~~~-~~~~~~d~~~~~~~~------------~~~~~~d 67 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV-EHW-IGHENFELINHDVVE------------PLYIEVD 67 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT-GGG-TTCTTEEEEECCTTS------------CCCCCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH-HHh-cCCCceEEEehHHHH------------HHHcCCC
Confidence 67999999999999999999999986666543222 11111 111 112345566666543 1234699
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC------------
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD------------ 383 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~------------ 383 (1152)
.|||+|+... .. ....+ ....+++|+.|+.+|.+++... . -.+|++||.+.+ |.
T Consensus 68 ~VihlAa~~~-~~-~~~~~---~~~~~~~Nv~g~~~ll~~~~~~-------~-~k~I~~SS~~vy-~~~~~~~~~e~~~~ 133 (312)
T d2b69a1 68 QIYHLASPAS-PP-NYMYN---PIKTLKTNTIGTLNMLGLAKRV-------G-ARLLLASTSEVY-GDPEVHPQSEDYWG 133 (312)
T ss_dssp EEEECCSCCS-HH-HHTTC---HHHHHHHHHHHHHHHHHHHHHH-------T-CEEEEEEEGGGG-BSCSSSSBCTTCCC
T ss_pred EEEECcccCC-ch-hHHhC---HHHHHHHHHHHHHHHHHHHHHc-------C-CcEEEEEChhee-cCCCCCCCCccccC
Confidence 9999998654 21 12222 3457889999999999986431 2 258888885433 21
Q ss_pred -----CCChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcccC
Q psy616 384 -----FGSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLWNN 426 (1152)
Q Consensus 384 -----~g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w~~ 426 (1152)
.....|+.+|.+.+.+++...+. ++ +++.+..+..-+
T Consensus 134 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~------~~~~lR~~~vyG 176 (312)
T d2b69a1 134 HVNPIGPRACYDEGKRVAETMCYAYMKQEGV------EVRVARIFNTFG 176 (312)
T ss_dssp BCCSSSTTHHHHHHHHHHHHHHHHHHHHHCC------CEEEEEECCEEC
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHHhCC------cEEEEEeeeEEC
Confidence 12467999999999999876554 33 677777665543
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.34 E-value=1.2e-06 Score=97.74 Aligned_cols=159 Identities=17% Similarity=0.173 Sum_probs=104.6
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEE-ecC---CcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLIL-SGR---SKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil-~~R---~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
-+.+|||||+|=||..++++|.++|..+.++ ..+ ..... .... -.+.++.++.+|++|.+.+..++.
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~-~~~~--~~~~~i~~~~~Di~d~~~~~~~~~------ 72 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA-NLEA--ILGDRVELVVGDIADAELVDKLAA------ 72 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG-GTGG--GCSSSEEEEECCTTCHHHHHHHHT------
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHH-HHHH--hhcCCeEEEEccCCCHHHHHHHHh------
Confidence 4679999999999999999999998753333 221 11111 1111 124578999999999988877642
Q ss_pred CCeeEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-------
Q psy616 312 GPIDGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF------- 384 (1152)
Q Consensus 312 G~idgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~------- 384 (1152)
..+.|+|.|+... ... ..++....+++|+.|+.++...+... . ..+|++||.+.+ |..
T Consensus 73 -~~~~v~~~a~~~~-~~~----~~~~~~~~~~~N~~g~~nll~~~~~~-------~-~k~i~~ss~~vy-g~~~~~~~~~ 137 (346)
T d1oc2a_ 73 -KADAIVHYAAESH-NDN----SLNDPSPFIHTNFIGTYTLLEAARKY-------D-IRFHHVSTDEVY-GDLPLREDLP 137 (346)
T ss_dssp -TCSEEEECCSCCC-HHH----HHHCCHHHHHHHTHHHHHHHHHHHHH-------T-CEEEEEEEGGGG-CCBCCGGGST
T ss_pred -hhhhhhhhhhccc-ccc----hhhCcccceeeehHhHHhhhhhhccc-------c-ccccccccceEe-cccCcccccc
Confidence 4677999998754 111 12233467889999999999886432 1 236666665432 211
Q ss_pred -----------------CChhhhHHHHHHHHHHHHHHhc-ccccCCCceEEEEeCCcc
Q psy616 385 -----------------GSCDYAMGNRFQTVYAKYLNNK-NIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 385 -----------------g~~~Yaaana~l~~la~~~~~~-g~~~~~~~~~~si~wg~w 424 (1152)
..+.|+.+|.+.+.+++...+. ++ +++.+..+.+
T Consensus 138 ~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i------~~~ilR~~~v 189 (346)
T d1oc2a_ 138 GHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGV------KATISNCSNN 189 (346)
T ss_dssp TTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC------EEEEEEECCE
T ss_pred ccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCC------CEEEEeecce
Confidence 1356999999999998776543 33 6666655433
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=98.22 E-value=1.2e-06 Score=94.16 Aligned_cols=90 Identities=17% Similarity=0.234 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccchhH
Q psy616 721 HLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACSSS 798 (1152)
Q Consensus 721 l~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCsSs 798 (1152)
|.-+++.++|+++|++++.++ .|++|+...... ....++-.++..-|+- =|.++|+.+|+||
T Consensus 27 L~~~a~~~al~~~~i~~~~Id----~vi~G~v~~~g~------------~~~n~aR~~al~aGlp~~vp~~tVn~~CaSg 90 (273)
T d1ulqa1 27 LLAHALSVLVDRSGVPKEEVE----DVYAGCANQAGE------------DNRNVARMALLLAGFPVEVAGCTVNRLCGSG 90 (273)
T ss_dssp HHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSST------------TTTTHHHHHHHHTTCCTTCEEEEEECGGGHH
T ss_pred HHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc------------ccccHHHHHHHHcCCCCccceEEEecccchH
Confidence 566789999999999999988 799997543110 0112444456666773 3999999999999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEeccccCc
Q psy616 799 LVATHIACQSLRQHECDTAISAGVNLMI 826 (1152)
Q Consensus 799 l~Al~~A~~~l~~G~~d~alvgGv~~~~ 826 (1152)
+.||++|++.|++|+.|++|+||++.+.
T Consensus 91 ~~Ai~~a~~~I~~G~~d~~lagG~EsmS 118 (273)
T d1ulqa1 91 LEAVAQAARAIWAGEGKVYIGSGVESMS 118 (273)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEEESS
T ss_pred HHHHHHHHHHHhcCCCccceeeeccccc
Confidence 9999999999999999999999999854
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=98.22 E-value=8.2e-07 Score=88.85 Aligned_cols=118 Identities=19% Similarity=0.283 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC-Ccccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG-PVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G-Ps~tvdtaCsS 797 (1152)
..+..+++.+||+++|+.+++++ -+++++...++.. ...+..|...||++. +++-|..+|++
T Consensus 52 ~~la~~Aa~~al~~a~~~~~~Id----~li~~s~~~~~~~-------------P~~a~~v~~~Lgl~~~~~~di~~~C~g 114 (174)
T d1hnja1 52 STMGFEAATRAIEMAGIEKDQIG----LIVVATTSATHAF-------------PSAACQIQSMLGIKGCPAFDVAAACAG 114 (174)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSCSS-------------SCHHHHHHHHHTCCSSCEEEECCGGGH
T ss_pred hHHHHHHHHHhhhhccccccccc----EEEEecCCccccc-------------cchhhhhhhccCCCchhhhhhhhhhcc
Confidence 46889999999999999998876 5666665544211 224677888899985 77889999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccc
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLS 871 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~ 871 (1152)
.+.||+.|...|++|.++.+|+.+++.. ++. +.++ .....+.+|+|+++++|++-+
T Consensus 115 ~~~al~~A~~~i~sg~~~~~Lvv~~e~~-S~~----------~~~~-------d~~~~~lfGDgA~A~vl~~~~ 170 (174)
T d1hnja1 115 FTYALSVADQYVKSGAVKYALVVGSDVL-ART----------CDPT-------DRGTIIIFGDGAGAAVLAASE 170 (174)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEECH-HHH----------SCTT-------CHHHHTTBCCEEEEEEEEEES
T ss_pred HHHHHHHHHHHHhcCCcceeEEEeeehh-hcc----------cCCC-------CCCeEEEeceeeEEEEEEeCC
Confidence 9999999999999999999999999863 111 1221 112345789999999999754
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=98.20 E-value=9.6e-07 Score=94.42 Aligned_cols=90 Identities=14% Similarity=0.152 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccchh
Q psy616 720 RHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACSS 797 (1152)
Q Consensus 720 rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCsS 797 (1152)
-|...+..++|+++|+++++++ .|++|...... ....++-.++..-|+. =|.++|+..|+|
T Consensus 29 dL~~~~~~~~l~~~~i~~~~Id----~vi~G~~~~~~-------------~~~n~ar~~al~aglp~~vpa~tv~~~C~S 91 (268)
T d1m3ka1 29 ELGATVISAVLERAGVAAGEVN----EVILGQVLPAG-------------EGQNPARQAAMKAGVPQEATAWGMNQLAGS 91 (268)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTT-------------SCSCHHHHHHHHTTCCTTSEEEEEECGGGH
T ss_pred HHHHHHHHHHHHHcCCCHHHCc----EEEEeeccccC-------------cchHHHhHHHHHhCCcccccceeecccCcc
Confidence 4667889999999999999988 79999754211 0123455677777875 388999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCc
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMI 826 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~ 826 (1152)
|+.||++|++.|++|++|++||||++.+.
T Consensus 92 g~~Ai~~Aa~~I~~G~~dvvlagG~EsmS 120 (268)
T d1m3ka1 92 GLRAVALGMQQIATGDASIIVAGGMESMS 120 (268)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEEEEEEST
T ss_pred cchHHHHHHHHHhCCCceEEeeccccccc
Confidence 99999999999999999999999999743
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=98.17 E-value=2.7e-06 Score=85.53 Aligned_cols=118 Identities=19% Similarity=0.189 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC-CCcccccccchh
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK-GPVMAINTACSS 797 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~-GPs~tvdtaCsS 797 (1152)
.-+..+++.+||+++|+.+++++ .+++++...++.. ...+..+...++.. -+++-|..+|+|
T Consensus 59 ~~ma~~Aa~~aL~~a~~~~~dId----~li~~s~~~~~~~-------------p~~a~~v~~~l~~~~~~~~Dv~~~C~g 121 (181)
T d1mzja1 59 QVMGVAASRRALEHAGVDPAEID----LVVVSTMTNFVHT-------------PPLSVAIAHELGADNAGGFDLSAACAG 121 (181)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCCS-------------SCHHHHHHHHHTCTTCEEEEEECGGGH
T ss_pred HHHhHHHHHhhhhhccCChhHCe----EEEEeccCCcccc-------------ccHHHHHHHhhcCCCccceeHHhhhcc
Confidence 45889999999999999998876 5666655433221 12456678888875 478889999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcccc
Q psy616 798 SLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKRLS 871 (1152)
Q Consensus 798 sl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~l~ 871 (1152)
.+.||+.|...|++|...-+|+.+++.. ++ .+. ++.....+.+|+|+++++|++-+
T Consensus 122 ~~~aL~~A~~~i~~~~~~~~LvV~~e~~-s~----------~~~-------~~d~~~~~lfGDGAaA~ll~~~~ 177 (181)
T d1mzja1 122 FCHALSIAADAVESGGSRHVLVVATERM-TD----------VID-------LADRSLSFLFGDGAGAAVVGPSD 177 (181)
T ss_dssp HHHHHHHHHHHHHHSSCSCEEEEEEEEG-GG----------GSC-------SSCTTTTTTBCEEEEEEEEEEES
T ss_pred HHHHHHHHhCHhhcCCCceeEEeeeccc-cc----------cCC-------CCCcceEEEeeeeeEEEEEEeCC
Confidence 9999999999999999999999999973 21 122 22234467899999999998643
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=98.08 E-value=2.2e-06 Score=91.13 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHH-hcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCC--CCcccccccch
Q psy616 720 RHLLQESWLALE-DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLK--GPVMAINTACS 796 (1152)
Q Consensus 720 rl~L~~a~~Ale-dAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~--GPs~tvdtaCs 796 (1152)
.|+-++..++|+ ++|+++++++ .|++|+....... ...++-.++..-|+- =|.++|+..|+
T Consensus 32 dL~~~~i~~~l~r~agi~~~~Id----~vi~G~v~~~~~~------------g~n~aR~~al~ag~p~~vp~~tV~~~C~ 95 (262)
T d1wdkc1 32 DMSAHLISKVLERNSKVDPGEVE----DVIWGCVNQTLEQ------------GWNIARMASLMTQIPHTSAAQTVSRLCG 95 (262)
T ss_dssp HHHHHHHHHHHHHCTTSCGGGEE----EEEEECSSBSBTT------------TTTHHHHHHTTSSSCTTSEEEEEECGGG
T ss_pred HHHHHHHHHHHHhcCCCCHHHee----EEEEEeecccccc------------cccchhhhHhhhhcccccchhhcccccc
Confidence 566778899998 6999998887 7899975432100 011233344444443 38999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEeccccCc
Q psy616 797 SSLVATHIACQSLRQHECDTAISAGVNLMI 826 (1152)
Q Consensus 797 Ssl~Al~~A~~~l~~G~~d~alvgGv~~~~ 826 (1152)
||+.||++|++.|++|+.|++|+||++.+.
T Consensus 96 Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS 125 (262)
T d1wdkc1 96 SSMSALHTAAQAIMTGNGDVFVVGGVEHMG 125 (262)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHhhcCCceeeecccccc
Confidence 999999999999999999999999999753
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=98.03 E-value=8.2e-06 Score=87.85 Aligned_cols=130 Identities=15% Similarity=0.072 Sum_probs=90.1
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
.+|||||+|=||.++++.|.++|. .+++..|+.. +.+|++|.+.++++++.. .+|.|
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~V 58 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDVI 58 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCEE
Confidence 389999999999999999998874 5555544431 347999999999888764 58999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCC-----------CC
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDF-----------GS 386 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~-----------g~ 386 (1152)
||+||... . ......+ ...+..|+.++.+|.+++ ... ...++++||.....+.. ..
T Consensus 59 ih~Aa~~~-~-~~~~~~~---~~~~~~n~~~~~~l~~~~-------~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~ 125 (298)
T d1n2sa_ 59 VNAAAHTA-V-DKAESEP---ELAQLLNATSVEAIAKAA-------NET-GAWVVHYSTDYVFPGTGDIPWQETDATSPL 125 (298)
T ss_dssp EECCCCCC-H-HHHTTCH---HHHHHHHTHHHHHHHHHH-------TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred EEeccccc-c-cccccCc---cccccccccccccchhhh-------hcc-ccccccccccccccCCCCCCCccccccCCC
Confidence 99999764 1 1122233 457788999999999884 222 34566666654332221 13
Q ss_pred hhhhHHHHHHHHHHHHH
Q psy616 387 CDYAMGNRFQTVYAKYL 403 (1152)
Q Consensus 387 ~~Yaaana~l~~la~~~ 403 (1152)
..|+.+|...+.+.+..
T Consensus 126 ~~y~~~k~~~e~~~~~~ 142 (298)
T d1n2sa_ 126 NVYGKTKLAGEKALQDN 142 (298)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred chHhhhhhhhhhhHHhh
Confidence 57998888877666543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.95 E-value=2.7e-05 Score=79.83 Aligned_cols=188 Identities=13% Similarity=0.076 Sum_probs=111.6
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYST-NLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~-~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
|.+|||||+|-||..+++.|.++|.. +|+...|++... ..+ +..++.|..++ . ....+.+|
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~---------~~~---~~~~~~d~~~~---~---~~~~~~~d 64 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------HPR---LDNPVGPLAEL---L---PQLDGSID 64 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------CTT---EECCBSCHHHH---G---GGCCSCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh---------ccc---ccccccchhhh---h---hccccchh
Confidence 78999999999999999999999874 666667764321 122 34455554332 1 12345789
Q ss_pred EEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCCCCChhhhHHHHH
Q psy616 316 GVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGDFGSCDYAMGNRF 395 (1152)
Q Consensus 316 gvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~~g~~~Yaaana~ 395 (1152)
.|||++|... .. .... ......++.++.++.+++ ......+|+++||..+.. .....|..+|..
T Consensus 65 ~vi~~~g~~~-~~---~~~~---~~~~~~~~~~~~~~~~~a-------~~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~ 128 (212)
T d2a35a1 65 TAFCCLGTTI-KE---AGSE---EAFRAVDFDLPLAVGKRA-------LEMGARHYLVVSALGADA--KSSIFYNRVKGE 128 (212)
T ss_dssp EEEECCCCCH-HH---HSSH---HHHHHHHTHHHHHHHHHH-------HHTTCCEEEEECCTTCCT--TCSSHHHHHHHH
T ss_pred eeeeeeeeec-cc---cccc---cccccchhhhhhhccccc-------cccccccccccccccccc--ccccchhHHHHH
Confidence 9999998753 11 1122 346778899999998884 234667899999876542 334679999987
Q ss_pred HHHHHHHHHhcccccCCCceEEEEeCCcccCccccccccccchhHHhh------cCCCCCCHHHHHHHHHHHHhcCceee
Q psy616 396 QTVYAKYLNNKNIYKKYTNKLITINWPLWNNSKFKIGNNEQTDFYFKS------SKQKVLHENDGLKLFEQLLIQDKIQY 469 (1152)
Q Consensus 396 l~~la~~~~~~g~~~~~~~~~~si~wg~w~~~Gm~~~~~~~~~~~~~~------~g~~~l~~~e~~~~l~~~l~~~~~~~ 469 (1152)
.+.+.+ ..+. .+++-+.++..-+.+... ......... ..+.++..++.++++..++..+....
T Consensus 129 ~E~~l~---~~~~-----~~~~I~Rp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~g~ 197 (212)
T d2a35a1 129 LEQALQ---EQGW-----PQLTIARPSLLFGPREEF---RLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGKGV 197 (212)
T ss_dssp HHHHHT---TSCC-----SEEEEEECCSEESTTSCE---EGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCSEE
T ss_pred Hhhhcc---cccc-----ccceeeCCcceeCCcccc---cHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCCCC
Confidence 665442 2222 134445555443211100 000000000 01124666788888877776655433
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.91 E-value=2.1e-05 Score=80.08 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcc--cc-cccc
Q psy616 719 QRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVM--AI-NTAC 795 (1152)
Q Consensus 719 ~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~--tv-dtaC 795 (1152)
..+..+++.+||++||+++++++ -++++++.+ +. .+ ..+..+...+++.+... .+ ..+|
T Consensus 76 ~~la~~Aa~~aL~~ag~~~~dId----~lI~~s~t~-~~--------~P-----~~aa~v~~~lg~~~~~~~~~i~~~gC 137 (200)
T d1u0ma1 76 KSRVPAVIQRALDDAELLATDID----VIIYVSCTG-FM--------MP-----SLTAWLINEMGFDSTTRQIPIAQLGC 137 (200)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCS----EEEEECSSS-CC--------SS-----CHHHHHHHHTTCCTTCEEEEECSCGG
T ss_pred HHHHHHHHHHHHHHcCCChhhhh----eEEEeccCC-CC--------cc-----hhHHHHHHHHhcCCCeeEeccccchh
Confidence 35788999999999999998886 455554432 11 11 24567888889887444 33 5799
Q ss_pred hhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCC----CCcccccccEEEEEcc
Q psy616 796 SSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERA----NGLVPSEAVVAVVLKR 869 (1152)
Q Consensus 796 sSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a----~G~v~gEG~~~vvLk~ 869 (1152)
++++.+|+.|...|++|..+.+||.+++.... .+.++ |.+. ....+|+|++++||..
T Consensus 138 ~g~~~al~~A~~~l~~~~~~~vLvv~~e~~S~-----------~~~~~------d~~~~~~~~~~lFgDGAaA~ll~~ 198 (200)
T d1u0ma1 138 AAGGAAINRAHDFCTAYPEANALIVACEFCSL-----------CYQPT------DLGVGSLLCNGLFGDGIAAAVVRG 198 (200)
T ss_dssp GHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGG-----------GCCTT------CCSHHHHHHHHHBCEEEEEEEEET
T ss_pred hHHHHHHHHHHHHHHhCCCCEEEEEEEecccc-----------ccCCC------CCChhhhhcccccccccEEEEEec
Confidence 99999999999999999999999999987320 11111 1111 1235799999999963
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=97.79 E-value=4.8e-05 Score=79.28 Aligned_cols=122 Identities=11% Similarity=0.110 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCCCcc---ccccc
Q psy616 718 RQRHLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKGPVM---AINTA 794 (1152)
Q Consensus 718 q~rl~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~GPs~---tvdta 794 (1152)
...+..+++.+||++||+++++++ .|++.++.+.+.. . .+..+-..+++..+.. .+..+
T Consensus 102 ~~~la~~Aa~~aL~~a~~~~~dId----~lI~~t~t~~~~p-------------~-~~a~~~~~l~~~~~~~~~~~~~~~ 163 (235)
T d1bi5a1 102 VPRLGKEAAVKAIKEWGQPKSKIT----HLIVCTTSGVDMP-------------G-ADYQLTKLLGLRPYVKRYMMYQQG 163 (235)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSCCCSS-------------C-HHHHHHHHHTCCTTCEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHcCCChhHCc----EEEEecccCCccC-------------c-cHHHHHHHHhcCCCceEEeeecCc
Confidence 345888999999999999998876 5666665543211 1 2345666677766543 34678
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCC-CCCcccCCCCCCCcccccccEEEEEccc
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSP-DGKCYVFDERANGLVPSEAVVAVVLKRL 870 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~-~g~~~~Fd~~a~G~v~gEG~~~vvLk~l 870 (1152)
|++.+.+|..|...|++|..+.+||.++++.. . .+.+ +..+. +.--..+.+|+|++++||...
T Consensus 164 C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~S-~----------~~~~~d~~~~--~~~v~~~lFGDGA~A~vl~~~ 227 (235)
T d1bi5a1 164 CFAGGTVLRLAKDLAENNKGARVLVVCSEVTA-V----------TFRGPSDTHL--DSLVGQALFGDGAAALIVGSD 227 (235)
T ss_dssp TTHHHHHHHHHHHHHHTSTTCEEEEEEEECGG-G----------TCCCCCTTCH--HHHHHHHHBCCEEEEEEEESS
T ss_pred cchHHHHHHHHHHHHHcCCCCeEEEEEeeecc-e----------ecCCCCCCch--hhhcceeeeccceEEEEEecC
Confidence 99999999999999999999999999999732 1 0111 10000 000012357999999999843
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.77 E-value=2.2e-05 Score=83.44 Aligned_cols=88 Identities=19% Similarity=0.173 Sum_probs=66.9
Q ss_pred HHHHHHHHHHH----hcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCC--CCCccccccc
Q psy616 721 HLLQESWLALE----DAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDL--KGPVMAINTA 794 (1152)
Q Consensus 721 l~L~~a~~Ale----dAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l--~GPs~tvdta 794 (1152)
|+-++..++++ ++|++++.++ .|++|+.... +. ...++-.++..-|+ .=|.++|+..
T Consensus 38 L~~~~i~~~l~r~~~~~~idp~~Id----~vi~G~v~~~------------g~-~~~~aR~~al~aglp~~vpa~tVnr~ 100 (269)
T d1afwa1 38 LLYNFLNEFIGRFPEPLRADLNLIE----EVACGNVLNV------------GA-GATEHRAACLASGIPYSTPFVALNRQ 100 (269)
T ss_dssp HHHHHHHHHHHTSCHHHHTCGGGCC----CEEEECSSSB------------GG-GHHHHHHHHHHTTCCTTSCEEEEECG
T ss_pred HHHHHHHHHHHhCCccccCChhhcC----EEEecccccc------------cc-ccccchhhhhhccccccccchhcccc
Confidence 44556677775 5679888887 6888864321 11 12344444555565 5699999999
Q ss_pred chhHHHHHHHHHHHHHcCCCCEEEEeccccC
Q psy616 795 CSSSLVATHIACQSLRQHECDTAISAGVNLM 825 (1152)
Q Consensus 795 CsSsl~Al~~A~~~l~~G~~d~alvgGv~~~ 825 (1152)
|+||+.||++|++.|++|+.|++|+||++.+
T Consensus 101 CaSg~~Ai~~Aa~~I~~G~~divlagG~Esm 131 (269)
T d1afwa1 101 CSSGLTAVNDIANKIKVGQIDIGLALGVESM 131 (269)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEEEEEEH
T ss_pred chHHHHHHHHHHHHHhhccccceeeeecccc
Confidence 9999999999999999999999999999974
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.72 E-value=9.5e-05 Score=78.61 Aligned_cols=125 Identities=18% Similarity=0.148 Sum_probs=83.6
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEE
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGV 317 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgv 317 (1152)
.+|||||+|-||..++++|.++|. .|+.+.|+. +|++|.++++++++.. .+|.|
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~--------------------~D~~d~~~~~~~l~~~-----~~d~v 56 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD--------------------LDITNVLAVNKFFNEK-----KPNVV 56 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT--------------------CCTTCHHHHHHHHHHH-----CCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh--------------------ccCCCHHHHHHHHHHc-----CCCEE
Confidence 389999999999999999999987 455555543 4999999998888754 57999
Q ss_pred EEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccC-----------CCCC
Q psy616 318 LHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILG-----------DFGS 386 (1152)
Q Consensus 318 Ih~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g-----------~~g~ 386 (1152)
||+|+... . .. ........+..|+.....+.+..... ...++..||...... ....
T Consensus 57 ih~a~~~~-~-~~---~~~~~~~~~~~n~~~~~~~~~~~~~~--------~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~ 123 (281)
T d1vl0a_ 57 INCAAHTA-V-DK---CEEQYDLAYKINAIGPKNLAAAAYSV--------GAEIVQISTDYVFDGEAKEPITEFDEVNPQ 123 (281)
T ss_dssp EECCCCCC-H-HH---HHHCHHHHHHHHTHHHHHHHHHHHHH--------TCEEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred Eeeccccc-c-cc---ccccchhhcccccccccccccccccc--------cccccccccceeeeccccccccccccccch
Confidence 99998754 1 11 22233456677888887777664332 234555555432211 1234
Q ss_pred hhhhHHHHHHHHHHH
Q psy616 387 CDYAMGNRFQTVYAK 401 (1152)
Q Consensus 387 ~~Yaaana~l~~la~ 401 (1152)
..|+..|.....+.+
T Consensus 124 ~~~~~~k~~~e~~~~ 138 (281)
T d1vl0a_ 124 SAYGKTKLEGENFVK 138 (281)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHH
Confidence 568877777665543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=97.59 E-value=0.00024 Score=76.33 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=55.7
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hH---HHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcC
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NS---IIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIG 312 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~---~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G 312 (1152)
+.+|||||+|-||..++++|.++|..++++.++... .. .....+.. ..+.++.+|++|.+.+.+.+.
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~--~~v~~v~~d~~d~~~~~~~~~------- 74 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ--LGAKLIEASLDDHQRLVDALK------- 74 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT--TTCEEECCCSSCHHHHHHHHT-------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhcc--CCcEEEEeecccchhhhhhcc-------
Confidence 458999999999999999999999766655443321 11 22223333 346788999999888766543
Q ss_pred CeeEEEEccccc
Q psy616 313 PIDGVLHIAGIS 324 (1152)
Q Consensus 313 ~idgvIh~AG~~ 324 (1152)
..+.+||+++..
T Consensus 75 ~~~~~~~~~~~~ 86 (312)
T d1qyda_ 75 QVDVVISALAGG 86 (312)
T ss_dssp TCSEEEECCCCS
T ss_pred Ccchhhhhhhhc
Confidence 567888888653
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=97.50 E-value=0.00025 Score=78.16 Aligned_cols=132 Identities=14% Similarity=0.040 Sum_probs=78.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCe
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPI 314 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~i 314 (1152)
+.|+++||||+|.||..+++.|.++|..+++++ |+..... ...+... ..+.++++|++|..++ ++.+ +...
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~-R~~~~~~-~~~~~~~-~~v~~~~gD~~d~~~~---~~~a---~~~~ 72 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQV-HSLKGLI-AEELQAI-PNVTLFQGPLLNNVPL---MDTL---FEGA 72 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEE-SCSCSHH-HHHHHTS-TTEEEEESCCTTCHHH---HHHH---HTTC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEE-CCcchhh-hhhhccc-CCCEEEEeeCCCcHHH---HHHH---hcCC
Confidence 578999999999999999999999998766665 4433222 2233332 3478899999986543 2222 3457
Q ss_pred eEEEEcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcccc--CCCCChhhhHH
Q psy616 315 DGVLHIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAIL--GDFGSCDYAMG 392 (1152)
Q Consensus 315 dgvIh~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~--g~~g~~~Yaaa 392 (1152)
|.++++..... . .++....++..++.. . ....++.+||+.... +......|..+
T Consensus 73 ~~~~~~~~~~~-~----------------~~~~~~~~~~~aa~~----a---gv~~~v~~Ss~~~~~~~~~~~~~~~~~~ 128 (350)
T d1xgka_ 73 HLAFINTTSQA-G----------------DEIAIGKDLADAAKR----A---GTIQHYIYSSMPDHSLYGPWPAVPMWAP 128 (350)
T ss_dssp SEEEECCCSTT-S----------------CHHHHHHHHHHHHHH----H---SCCSEEEEEECCCGGGTSSCCCCTTTHH
T ss_pred ceEEeeccccc-c----------------hhhhhhhHHHHHHHH----h---CCCceEEEeeccccccCCcccchhhhhh
Confidence 77776653221 1 122233445554321 1 223366778765432 33445567777
Q ss_pred HHHHHHH
Q psy616 393 NRFQTVY 399 (1152)
Q Consensus 393 na~l~~l 399 (1152)
|.....+
T Consensus 129 k~~~~~~ 135 (350)
T d1xgka_ 129 KFTVENY 135 (350)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7655543
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=97.39 E-value=0.00076 Score=71.67 Aligned_cols=81 Identities=17% Similarity=0.281 Sum_probs=57.3
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch--HH---HHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN--SI---IYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~--~~---~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
.+.+|||||+|-||..+++.|.++|..++++.++.... .. ....+.. ..+.++.+|+.+.....+.++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~----- 75 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK----- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhcc--CCcEEEEeecccchhhhhhhh-----
Confidence 46799999999999999999999998666665433221 11 2223333 346778899999987766553
Q ss_pred cCCeeEEEEcccccC
Q psy616 311 IGPIDGVLHIAGISG 325 (1152)
Q Consensus 311 ~G~idgvIh~AG~~~ 325 (1152)
..+.+||+++...
T Consensus 76 --~~~~vi~~~~~~~ 88 (307)
T d1qyca_ 76 --NVDVVISTVGSLQ 88 (307)
T ss_dssp --TCSEEEECCCGGG
T ss_pred --hceeeeecccccc
Confidence 4678999887543
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.27 E-value=0.00037 Score=74.53 Aligned_cols=158 Identities=16% Similarity=0.181 Sum_probs=93.2
Q ss_pred EEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEE
Q psy616 239 YLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVL 318 (1152)
Q Consensus 239 ~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvI 318 (1152)
+|||||+|=||..++++|+++|..+|+.+.+-....+.. .+... ..+|..+.+.....+.. ...+..++.|+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~i~ 73 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-NLVDL------NIADYMDKEDFLIQIMA-GEEFGDVEAIF 73 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGH-HHHTS------CCSEEEEHHHHHHHHHT-TCCCSSCCEEE
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhh-ccccc------chhhhccchHHHHHHhh-hhcccchhhhh
Confidence 799999999999999999999975555443221111111 11111 11233344433222221 23456789999
Q ss_pred EcccccCcCcccccCCHHHHHHHHhhhchHHHHHHHHHHHHHHHhcCCCCCEEEEecCCccccCC-----------CCCh
Q psy616 319 HIAGISGLTSNILEANYKNFYSVLSSKISGTIALNYALENTILKLQKNKLDFVCYFSSSSAILGD-----------FGSC 387 (1152)
Q Consensus 319 h~AG~~~~~~~~~~~~~e~~~~~~~~kv~g~~~L~~~~~p~m~~~~~~~~~~iV~~SS~a~~~g~-----------~g~~ 387 (1152)
|.|+... . ..... ......++.++.++.+++... ... +|++||.....+. ....
T Consensus 74 ~~aa~~~-~---~~~~~---~~~~~~~~~~~~~~l~~~~~~-------~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~ 138 (307)
T d1eq2a_ 74 HEGACSS-T---TEWDG---KYMMDNNYQYSKELLHYCLER-------EIP-FLYASSAATYGGRTSDFIESREYEKPLN 138 (307)
T ss_dssp ECCSCCC-T---TCCCH---HHHHHHTHHHHHHHHHHHHHH-------TCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSS
T ss_pred hhccccc-c---ccccc---ccccccccccccccccccccc-------ccc-cccccccccccccccccccccccccccc
Confidence 9997543 1 12222 345677788888887775432 233 5555555544433 2456
Q ss_pred hhhHHHHHHHHHHHHHHhcccccCCCceEEEEeCCcc
Q psy616 388 DYAMGNRFQTVYAKYLNNKNIYKKYTNKLITINWPLW 424 (1152)
Q Consensus 388 ~Yaaana~l~~la~~~~~~g~~~~~~~~~~si~wg~w 424 (1152)
.|+.+|...+.+++....+. +.+++.+.+...
T Consensus 139 ~Y~~~K~~~e~~~~~~~~~~-----~~~~~~~r~~~v 170 (307)
T d1eq2a_ 139 VYGYSKFLFDEYVRQILPEA-----NSQIVGFRYFNV 170 (307)
T ss_dssp HHHHHHHHHHHHHHHHGGGC-----SSCEEEEEECEE
T ss_pred ccccccchhhhhcccccccc-----ccccccccceeE
Confidence 89999999999998776542 236666665543
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.23 E-value=0.00013 Score=67.05 Aligned_cols=99 Identities=11% Similarity=0.094 Sum_probs=65.4
Q ss_pred CCceEEEEEEEEEec-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCC
Q psy616 877 GDPIHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYN 955 (1152)
Q Consensus 877 gd~i~avI~g~a~~~-dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~ 955 (1152)
|=+++|.|.+++... |.... +.+-..+++++|+++|++++|||++|.|-.... -.-+..+.++-...+
T Consensus 2 gl~plAri~~~a~~g~~P~~m------~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~-----q~l~~~~~l~id~~k 70 (124)
T d1afwa2 2 NLPVLGRYIDFQTVGVPPEIM------GVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA-----QALYCIHKLGIDLNK 70 (124)
T ss_dssp TCCCCEEEEEEEEEECCGGGG------GGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-----HHHHHHHHHTCCGGG
T ss_pred CCcEEEEEEEEEEEecCHHHh------hhChHHHHHHHHHHcCCCcccCcEEEeccchhH-----HHHHHHHHcCCChhh
Confidence 346789999988652 22211 234578899999999999999999999955432 222333344322211
Q ss_pred CCceeeeccCCCCCccccchhhHHHHHHHHhhhc
Q psy616 956 QKFCAITSNKSNIGHTFAASGLVSLINLVQSIKY 989 (1152)
Q Consensus 956 ~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~ 989 (1152)
..+-|+.-+ +||+.+|||.--++..+..|++
T Consensus 71 --vN~~GGaiA-lGHP~GaSGarlv~~l~~~L~~ 101 (124)
T d1afwa2 71 --VNPRGGAIA-LGHPLGCTGARQVATILRELKK 101 (124)
T ss_dssp --BSTTCCHHH-HCBCTTTHHHHHHHHHHHHSCT
T ss_pred --ccccCccce-ecCCcCCchHHHHHHHHHHhcc
Confidence 112343333 4999999999999888888764
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=97.18 E-value=0.00024 Score=65.21 Aligned_cols=120 Identities=18% Similarity=0.226 Sum_probs=78.0
Q ss_pred eEEEEEEEEEec-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHH--HHHhcccCCCC
Q psy616 880 IHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINAL--HDVFKNKTYNQ 956 (1152)
Q Consensus 880 i~avI~g~a~~~-dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al--~~~f~~~~~~~ 956 (1152)
++|.|.++++.. |....+ . +-..+++++|+++|++++|||++|.|-.. =.+.| .+.+.-.-+..
T Consensus 2 PlA~i~~~~~~g~~P~~~~-~-----~P~~A~~~~L~r~gl~~~Did~~EinEAF-------Aaq~l~~~~~~~l~~d~~ 68 (125)
T d1ulqa2 2 PLARVRAIAVAGVPPRIMG-I-----GPVPATRKALERAGLSFSDLGLIELNEAF-------AAQALAVLREWSLSMEDQ 68 (125)
T ss_dssp CSEEEEEEEEEECCGGGGG-G-----THHHHHHHHHHHTTCCGGGCSEEEECCSB-------HHHHHHHHHHHTCCTTCT
T ss_pred CeEEEEEEEEEecCHHHHh-h-----ccHHHHHhHhhccCcCccccchheecccc-------chhHHHHHHHhhccCchh
Confidence 468889887652 221111 2 23678999999999999999999999432 22333 22222111111
Q ss_pred CceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCc
Q psy616 957 KFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAF 1036 (1152)
Q Consensus 957 ~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sf 1036 (1152)
....-|+.-+ +||+.+|+|.--++..+-.|+.+ ..+++.++.-
T Consensus 69 kvN~~GGaIA-lGHP~GASGari~~tl~~~L~~~------------------------------------~~~~G~as~C 111 (125)
T d1ulqa2 69 RLNPNGGAIA-LGHPLGASGARILTTLVHEMRRR------------------------------------KVQFGLATMC 111 (125)
T ss_dssp TBSTTCCHHH-HCCCHHHHHHHHHHHHHHHHHHT------------------------------------TCSEEEEEEE
T ss_pred hcCCCCCccc-ccCCccccchhHHHHHHHHHHhc------------------------------------CCCEEEEEec
Confidence 1122233333 59999999999999999999862 1256666666
Q ss_pred CCCcceEEEEEcc
Q psy616 1037 GMSGTNAHIVLQE 1049 (1152)
Q Consensus 1037 G~gG~nah~il~~ 1049 (1152)
.-||.-..++||.
T Consensus 112 ~gGG~g~A~~iE~ 124 (125)
T d1ulqa2 112 IGVGQGIAVVVEG 124 (125)
T ss_dssp ETTTEEEEEEEEE
T ss_pred ccccceeEEEEEe
Confidence 6788888888874
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.02 E-value=4.6e-07 Score=91.85 Aligned_cols=45 Identities=18% Similarity=0.185 Sum_probs=33.7
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHhC
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRS-KLNSIIYKKLKKF 283 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~-~~~~~~~~~l~~~ 283 (1152)
++.|+||+|+||.++|+.|++.|+.+++. +|+ +..+++.+++...
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~-~R~~e~~~~l~~~i~~~ 47 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVG-SRREEKAEAKAAEYRRI 47 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEE-ESSHHHHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHHHHHHhc
Confidence 36788999999999999999999965555 565 4445666666544
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=97.02 E-value=0.00018 Score=66.53 Aligned_cols=123 Identities=22% Similarity=0.229 Sum_probs=79.0
Q ss_pred CCceEEEEEEEEEec-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHH--HHhcccC
Q psy616 877 GDPIHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALH--DVFKNKT 953 (1152)
Q Consensus 877 gd~i~avI~g~a~~~-dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~--~~f~~~~ 953 (1152)
|-+++|.|++++... |.... +.+-..+++++|+++|++++|||++|.|=. .-.+++. +-+....
T Consensus 1 Gl~pla~i~~~~~~g~dP~~m------g~~p~~A~~klL~ragl~~~did~~EinEA-------FA~q~l~~~~~~~~~~ 67 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGVDPAIM------GYGPVPATQKALKRAGLNMADIDFIELNEA-------FAAQALPVLKDLKVLD 67 (128)
T ss_dssp TCCCSEEEEEEEEEECCGGGG------GGTHHHHHHHHHHHHTCCGGGCCEEEECCS-------BHHHHHHHHHHTTCGG
T ss_pred CCCEEEEEEEEEEEecCHHHh------ccCcHHHHHHHhhhcCccccccceEEeecc-------cchhhhhhhhhccccc
Confidence 345788999987653 32221 123477899999999999999999999943 2333332 1121100
Q ss_pred -CCCCceeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEE
Q psy616 954 -YNQKFCAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGA 1032 (1152)
Q Consensus 954 -~~~~~~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~ 1032 (1152)
...+..+-|+.-+ +||+.+|+|.--++..+..|+++ ..+++.
T Consensus 68 ~~~ekvN~~GGaiA-lGHP~GASGaRlv~~l~~~L~~~------------------------------------~~~~Gl 110 (128)
T d1wdkc2 68 KMNEKVNLHGGAIA-LGHPFGCSGARISGTLLNVMKQN------------------------------------GGTFGL 110 (128)
T ss_dssp GHHHHBSTTCCHHH-HCCCHHHHHHHHHHHHHHHHHHT------------------------------------TCSEEE
T ss_pred CCcceecCCCCccc-ccccccccchhHHHHHHHHHHhc------------------------------------CCCEEE
Confidence 0001112233333 59999999999999999999872 125666
Q ss_pred EcCcCCCcceEEEEEcc
Q psy616 1033 VSAFGMSGTNAHIVLQE 1049 (1152)
Q Consensus 1033 v~sfG~gG~nah~il~~ 1049 (1152)
++.-.-||.-..++||.
T Consensus 111 as~C~gGG~g~A~~iEr 127 (128)
T d1wdkc2 111 STMCIGLGQGIATVFER 127 (128)
T ss_dssp EEEEETTTEEEEEEEEC
T ss_pred EEecccccceeEEEEEe
Confidence 66666678888888874
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=96.99 E-value=0.00025 Score=69.67 Aligned_cols=109 Identities=13% Similarity=0.177 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEEEeccCCchhccccccccccchhhHHHHHHHHHcCCCC--CcccccccchhH
Q psy616 721 HLLQESWLALEDAGYGPNQIANQKIGMFVGVEEGSNYQDRLDQVNLTSTHNAILSARLAYFMDLKG--PVMAINTACSSS 798 (1152)
Q Consensus 721 l~L~~a~~AledAG~~~~~l~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~~~l~G--Ps~tvdtaCsSs 798 (1152)
+.++++.++|++.+ .+++++++-.+....+. ....+..+...+++.. .++-+..+|+++
T Consensus 53 ma~~Aa~~al~~~~-------~~~id~li~~t~~~~~~------------~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~ 113 (166)
T d1xpma1 53 MGANAAKDIITDED-------KKKIGMVIVATESAVDA------------AKAAAVQIHNLLGIQPFARCFEMKEACYAA 113 (166)
T ss_dssp HHHHHHHTTCCHHH-------HHHEEEEEEECSSCSBS------------SSCHHHHHHHHTTCCSSCEEEEEESTTTTH
T ss_pred HHHHHHHhhhcccc-------CCCCCeEEEeccccccc------------cchhHHHHHHhhccccceEEeeecccHHHH
Confidence 55666666665443 24566666543322111 1235677888889876 568899999999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEeccccCcCHHHHHHHHhcCCCCCCCCcccCCCCCCCcccccccEEEEEcc
Q psy616 799 LVATHIACQSLRQHECDTAISAGVNLMISPEAYIAMTSAGMLSPDGKCYVFDERANGLVPSEAVVAVVLKR 869 (1152)
Q Consensus 799 l~Al~~A~~~l~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~~Fd~~a~G~v~gEG~~~vvLk~ 869 (1152)
+.||+.|...|++|....+||.+.+.... . ++. .+-+..|+|+++++|.+
T Consensus 114 ~~al~~A~~~i~~~~~~~alvV~sd~~~~-----------~---------~~~-~~~~~fGDGA~A~ll~~ 163 (166)
T d1xpma1 114 TPAIQLAKDYLATRPNEKVLVIATDTARY-----------G---------LNS-GGEPTQGAGAVAMVIAH 163 (166)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEEEEEEECC-----------C---------TTC-SSGGGCEEEEEEEEEEE
T ss_pred HHHHHHHhhHHhcCCCCeEEEEEEceEec-----------c---------CCC-CCCccCCCeeEEEEEec
Confidence 99999999999999999999999885221 1 111 12367899999999976
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=96.89 E-value=0.00045 Score=63.30 Aligned_cols=120 Identities=15% Similarity=0.109 Sum_probs=77.4
Q ss_pred eEEEEEEEEEec-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCc
Q psy616 880 IHAIIRGSGINY-DGKTNGITAPNGISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKF 958 (1152)
Q Consensus 880 i~avI~g~a~~~-dG~~~~~~~P~~~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~ 958 (1152)
+.|.|.++++.. |.... +.+-..+++++|+++|++.+|||++|.|=.... -.-+..+.++-...+-
T Consensus 3 Plari~~~a~~g~dP~~m------g~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~-----q~la~~~~l~id~~kv-- 69 (124)
T d1m3ka2 3 PLGRIVSWATVGVDPKVM------GTGPIPASRKALERAGWKIGDLDLVEANEAFAA-----QACAVNKDLGWDPSIV-- 69 (124)
T ss_dssp CSEEEEEEEEEECCGGGG------GGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-----HHHHHHHHHCCCGGGB--
T ss_pred cEEEEEEEEEEecChHHh------ccchHHHHHHHHHHcCCChhcccHHHhcccchh-----heeeehHhhCCChhhc--
Confidence 568888887642 22221 123367899999999999999999999954322 2223334444222111
Q ss_pred eeeeccCCCCCccccchhhHHHHHHHHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCC
Q psy616 959 CAITSNKSNIGHTFAASGLVSLINLVQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGM 1038 (1152)
Q Consensus 959 ~~igsvKsniGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~ 1038 (1152)
.+-|+.-+ +||+.+|||.--++..+..|+++ ..+++.++.-.-
T Consensus 70 N~~GGaiA-lGHP~GaSGarl~~tl~~~L~~~------------------------------------~~~~Glas~C~g 112 (124)
T d1m3ka2 70 NVNGGAIA-IGHPIGASGARILNTLLFEMKRR------------------------------------GARKGLATLCIG 112 (124)
T ss_dssp STTCCHHH-HCCCTTTHHHHHHHHHHHHHHHH------------------------------------TCSEEEEEEEET
T ss_pred CCCCCccc-cccCcCccchhHHHHHHHHHHhc------------------------------------CCCEEEEEeccc
Confidence 11122222 59999999999999999988871 125666666666
Q ss_pred CcceEEEEEcc
Q psy616 1039 SGTNAHIVLQE 1049 (1152)
Q Consensus 1039 gG~nah~il~~ 1049 (1152)
||.-..++||.
T Consensus 113 GG~g~A~liE~ 123 (124)
T d1m3ka2 113 GGMGVAMCIES 123 (124)
T ss_dssp TTEEEEEEEEC
T ss_pred ccceeEEEEEe
Confidence 78888888874
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=96.48 E-value=0.0022 Score=63.99 Aligned_cols=90 Identities=17% Similarity=0.176 Sum_probs=60.8
Q ss_pred cccCCCEEEE-ECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh-
Q psy616 232 YIKQGGTYLI-TGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN- 309 (1152)
Q Consensus 232 ~~~~~~~~LI-TGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 309 (1152)
.++++.+++| +||+||+|....+..-..|+++|..+++++..++..+.+++.|....+. .|-.+..++.+.+.++..
T Consensus 25 ~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~ 103 (189)
T d1gu7a2 25 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQ 103 (189)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHH
T ss_pred CCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhh
Confidence 4677765555 7999999999888777788877777777777777778888888765433 221122233344444433
Q ss_pred hcCCeeEEEEccc
Q psy616 310 NIGPIDGVLHIAG 322 (1152)
Q Consensus 310 ~~G~idgvIh~AG 322 (1152)
..+.+|.+|.+.|
T Consensus 104 ~g~~vdvv~D~vg 116 (189)
T d1gu7a2 104 SGGEAKLALNCVG 116 (189)
T ss_dssp HTCCEEEEEESSC
T ss_pred ccCCceEEEECCC
Confidence 3457999999876
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.42 E-value=0.006 Score=59.67 Aligned_cols=82 Identities=13% Similarity=0.096 Sum_probs=55.2
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.++||+||+|++|...++.....|++++++++ ++ +..+.+++.|..-. .|.++.+-.+++.+... -
T Consensus 25 ~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~-~~---~~~~~~~~~Ga~~v---i~~~~~~~~~~i~~~t~--~ 95 (174)
T d1yb5a2 25 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG-TE---EGQKIVLQNGAHEV---FNHREVNYIDKIKKYVG--E 95 (174)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-SH---HHHHHHHHTTCSEE---EETTSTTHHHHHHHHHC--T
T ss_pred CCCCCCEEEEEeccccccccccccccccCcccccccc-cc---cccccccccCcccc---cccccccHHHHhhhhhc--c
Confidence 4678999999999999999999988888886555554 43 22345566786533 36666544333333321 1
Q ss_pred CCeeEEEEccc
Q psy616 312 GPIDGVLHIAG 322 (1152)
Q Consensus 312 G~idgvIh~AG 322 (1152)
..+|.+|.+.|
T Consensus 96 ~g~d~v~d~~g 106 (174)
T d1yb5a2 96 KGIDIIIEMLA 106 (174)
T ss_dssp TCEEEEEESCH
T ss_pred CCceEEeeccc
Confidence 36999999876
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.28 E-value=0.02 Score=58.83 Aligned_cols=151 Identities=10% Similarity=0.133 Sum_probs=97.3
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLW 104 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw 104 (1152)
-..++.||.....|++.+++++|.++|. |+.+... ... ...-..+..+-.++++.+++++++.+..+.+|.+||.-
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~-~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA 81 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-SGA--PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA 81 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-SCC--CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-cch--hcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeee
Confidence 4678899989999999999999988876 4444433 111 12233588899999999999999999999999999986
Q ss_pred CCCCcccc-------------cChHHHHHHHHHH----HhCCCCceEEEEEcccccc-cCCccchhhhHHHHHHHHHHHH
Q psy616 105 PLEDKNCI-------------YNIMPIIYFLQAV----KKSKLYLRKLIISGISINK-KNEEDLYYCYFNSWVAFERSLH 166 (1152)
Q Consensus 105 ~~~~~~~~-------------~~~~~l~~l~qal----~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~g~~r~~~ 166 (1152)
........ -++.+.+++.|++ .+.+ ..+++.++...... ......+...-+++.+|.|+++
T Consensus 82 G~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA 160 (237)
T d1uzma1 82 GLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIA 160 (237)
T ss_dssp SCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHH
T ss_pred cccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCcccHHHHHHHHHHHHHHHHHH
Confidence 65222111 1245667777753 2333 34555554432211 1223334444567899999999
Q ss_pred HHcCCCcEEEEEec
Q psy616 167 IIMPETQISIVFAE 180 (1152)
Q Consensus 167 ~e~p~~~~~~vd~~ 180 (1152)
.|+..-.+++-.+.
T Consensus 161 ~e~~~~gIrVN~I~ 174 (237)
T d1uzma1 161 RELSKANVTANVVA 174 (237)
T ss_dssp HHHGGGTEEEEEEE
T ss_pred hhhhcCCceeeeee
Confidence 99975444443333
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.11 E-value=0.031 Score=57.56 Aligned_cols=151 Identities=9% Similarity=0.048 Sum_probs=96.9
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----cCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----PNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVF 101 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv 101 (1152)
+.+..||.....|++.+++++|.++|. |+.+... ..... ......+..+-.++++.+++++.+.++.+.+|.+|
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~-~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 82 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIE-EGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence 467889999999999999999988776 4444433 22111 12233577888899999999999999988999999
Q ss_pred EeCCCCCcccc-------------cChHHHHHHHHHHHhC---CCCceEEEEEcccccccCCccchhhhHHHHHHHHHHH
Q psy616 102 YLWPLEDKNCI-------------YNIMPIIYFLQAVKKS---KLYLRKLIISGISINKKNEEDLYYCYFNSWVAFERSL 165 (1152)
Q Consensus 102 ~lw~~~~~~~~-------------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~g~~r~~ 165 (1152)
|.-........ -++.+.+++.|+.... .....+.+++............+...-+++.+|.|++
T Consensus 83 nnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~~~Y~asKaal~~ltk~l 162 (242)
T d1ulsa_ 83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTL 162 (242)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred ECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCCcchHHHHHHHHHHHHHH
Confidence 97654222111 1346777888874432 2233333333322221122233444456789999999
Q ss_pred HHHcCC--CcEEEEE
Q psy616 166 HIIMPE--TQISIVF 178 (1152)
Q Consensus 166 ~~e~p~--~~~~~vd 178 (1152)
+.|+-. +++-.|.
T Consensus 163 A~ela~~gIrVN~I~ 177 (242)
T d1ulsa_ 163 ALELGRWGIRVNTLA 177 (242)
T ss_dssp HHHHGGGTEEEEEEE
T ss_pred HHHHhhhCcEEEEEe
Confidence 999964 5554443
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=95.96 E-value=0.01 Score=58.42 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=55.2
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
..++++.++||+||+||+|...++.....|+ ++|.+.+++ +..+.+++.|....+.. .+++..+...+.. .
T Consensus 25 ~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~---~~~~~~~~~Ga~~vi~~---~~~~~~~~~~~~~--~ 95 (182)
T d1v3va2 25 CGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSD---EKIAYLKQIGFDAAFNY---KTVNSLEEALKKA--S 95 (182)
T ss_dssp TCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSH---HHHHHHHHTTCSEEEET---TSCSCHHHHHHHH--C
T ss_pred hCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCH---HHHHHHHhhhhhhhccc---ccccHHHHHHHHh--h
Confidence 4578899999999999999999988777787 555554443 23455667787655433 3333333333322 2
Q ss_pred cCCeeEEEEccc
Q psy616 311 IGPIDGVLHIAG 322 (1152)
Q Consensus 311 ~G~idgvIh~AG 322 (1152)
...+|.||.+.|
T Consensus 96 ~~Gvd~v~D~vG 107 (182)
T d1v3va2 96 PDGYDCYFDNVG 107 (182)
T ss_dssp TTCEEEEEESSC
T ss_pred cCCCceeEEecC
Confidence 246999999887
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.75 E-value=0.014 Score=57.23 Aligned_cols=82 Identities=16% Similarity=0.058 Sum_probs=54.7
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.++||+||+|++|...++.+...|+.+++.+++. +..+.+++.|.... .|-.+++-.+++ .+... .
T Consensus 22 ~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~----~~~~~l~~~Ga~~v---i~~~~~~~~~~v-~~~t~-~ 92 (183)
T d1pqwa_ 22 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD----AKREMLSRLGVEYV---GDSRSVDFADEI-LELTD-G 92 (183)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH----HHHHHHHTTCCSEE---EETTCSTHHHHH-HHHTT-T
T ss_pred CCCCCCEEEEECCCCCcccccchhhccccccceeeeccc----cccccccccccccc---ccCCccCHHHHH-HHHhC-C
Confidence 467889999999999999999998888888666665432 22355677787633 344454333322 22211 2
Q ss_pred CCeeEEEEccc
Q psy616 312 GPIDGVLHIAG 322 (1152)
Q Consensus 312 G~idgvIh~AG 322 (1152)
..+|.+|.+.|
T Consensus 93 ~g~d~v~d~~g 103 (183)
T d1pqwa_ 93 YGVDVVLNSLA 103 (183)
T ss_dssp CCEEEEEECCC
T ss_pred CCEEEEEeccc
Confidence 36999999887
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.75 E-value=0.066 Score=55.92 Aligned_cols=157 Identities=13% Similarity=0.106 Sum_probs=101.1
Q ss_pred cccCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc-------cccCCC--ccEEEcCCChhhHHHHHHHHHhc
Q psy616 24 SKVKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK-------ISPNDT--VHYKINKDNINDYTFILNKIYEK 93 (1152)
Q Consensus 24 ~~~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~-------~~~~~~--~~~~i~p~~~~d~~~l~~~l~~~ 93 (1152)
.+.+++.+||+....|++.+++++|.++|. |+......... +.+... ..+..+-.++++..++++.+.+.
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 93 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 93 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence 456788999999999999999999988876 44443332111 111111 23667888999999999999999
Q ss_pred CCCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHhCCC-CceEEEEEccccc--ccCCccchhhhHHH
Q psy616 94 DKKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKSKL-YLRKLIISGISIN--KKNEEDLYYCYFNS 157 (1152)
Q Consensus 94 ~~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~~~-~~~~~~v~~~~~~--~~~~~~~~~~~~~~ 157 (1152)
.+.+|.+||.-........ -++.+.+.++|++...-. ..+..+++..... .......+...-++
T Consensus 94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKaa 173 (272)
T d1g0oa_ 94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGA 173 (272)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHH
T ss_pred hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHHH
Confidence 8999999997655322111 134677888888654322 3344555432111 11122223334467
Q ss_pred HHHHHHHHHHHcC--CCcEEEEEec
Q psy616 158 WVAFERSLHIIMP--ETQISIVFAE 180 (1152)
Q Consensus 158 ~~g~~r~~~~e~p--~~~~~~vd~~ 180 (1152)
+.+|+|+++.|+- ++++..|.--
T Consensus 174 l~~ltk~lA~e~~~~gIrVN~I~PG 198 (272)
T d1g0oa_ 174 IETFARCMAIDMADKKITVNVVAPG 198 (272)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred HHHHHHHHHHHhchhCeEEEEEccC
Confidence 8999999999994 5677776543
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=95.72 E-value=0.015 Score=57.15 Aligned_cols=86 Identities=19% Similarity=0.111 Sum_probs=56.1
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.++||+|+ |++|+..++.+...|+.+|+.+.+++... +.+++.|....+ ...=.+..+..+.+.+....
T Consensus 25 ~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~---~~a~~lGa~~vi-~~~~~~~~~~~~~i~~~~~~- 98 (182)
T d1vj0a2 25 ESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL---KLAEEIGADLTL-NRRETSVEERRKAIMDITHG- 98 (182)
T ss_dssp SCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHH---HHHHHTTCSEEE-ETTTSCHHHHHHHHHHHTTT-
T ss_pred CCCCCCEEEEECC-Cccchhheecccccccccccccccccccc---cccccccceEEE-eccccchHHHHHHHHHhhCC-
Confidence 4678899999986 89999999999888988888887765333 344566765432 22222333333333333221
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
..+|.||.+.|.
T Consensus 99 ~g~Dvvid~vG~ 110 (182)
T d1vj0a2 99 RGADFILEATGD 110 (182)
T ss_dssp SCEEEEEECSSC
T ss_pred CCceEEeecCCc
Confidence 259999999876
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.66 E-value=0.016 Score=56.17 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=58.9
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.+++|+|++|++|..++..+...|..+|+.+.+++.. .+.+++.|.... + |-++++..++..+.. .-
T Consensus 24 ~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~---~~~~~~~Ga~~~-i--~~~~~~~~~~~~~~~--~~ 95 (170)
T d1jvba2 24 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA---VEAAKRAGADYV-I--NASMQDPLAEIRRIT--ES 95 (170)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH---HHHHHHHTCSEE-E--ETTTSCHHHHHHHHT--TT
T ss_pred CCCCCCEEEEEeccccceeeeeecccccccccccccccchhh---HHHHHHcCCcee-e--ccCCcCHHHHHHHHh--hc
Confidence 467889999999999999999999999998888888877533 344455676533 2 344443444443322 12
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
+.+|.+|.++|.
T Consensus 96 ~~~d~vid~~g~ 107 (170)
T d1jvba2 96 KGVDAVIDLNNS 107 (170)
T ss_dssp SCEEEEEESCCC
T ss_pred ccchhhhccccc
Confidence 369999999985
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=95.62 E-value=0.015 Score=56.88 Aligned_cols=83 Identities=13% Similarity=0.117 Sum_probs=54.0
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.++||+||+||+|...++.....|++ ++.+.+++.. .+.+++.|.... .|-++++-.+++ .++- .-
T Consensus 25 ~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~-Vi~~~~s~~k---~~~~~~lGa~~v---i~~~~~d~~~~v-~~~t-~g 95 (179)
T d1qora2 25 EIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGTAQK---AQSALKAGAWQV---INYREEDLVERL-KEIT-GG 95 (179)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTCE-EEEEESSHHH---HHHHHHHTCSEE---EETTTSCHHHHH-HHHT-TT
T ss_pred CCCCCCEEEEEccccccchHHHHHHHHhCCe-EeecccchHH---HHHHHhcCCeEE---EECCCCCHHHHH-HHHh-CC
Confidence 4678999999999999999999888888875 5554444332 233455676532 365554433333 3321 22
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
..+|.||.+.|-
T Consensus 96 ~g~d~v~d~~g~ 107 (179)
T d1qora2 96 KKVRVVYDSVGR 107 (179)
T ss_dssp CCEEEEEECSCG
T ss_pred CCeEEEEeCccH
Confidence 469999998863
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=95.44 E-value=0.075 Score=54.75 Aligned_cols=154 Identities=7% Similarity=0.064 Sum_probs=97.9
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcc-cc-ccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEe
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNI-KI-SPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYL 103 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~-~~-~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~l 103 (1152)
.+++.||.....|++.+++++|.++|. |+.....+.. .. .......|..+-.++++.+++++++.++.+.+|.+||.
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn 83 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNN 83 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEe
Confidence 567889999999999999999988876 4444433110 00 11122347888899999999999999999999999997
Q ss_pred CCCCCcccc-------------cChHHHHHHHHHHHh---CCCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHH
Q psy616 104 WPLEDKNCI-------------YNIMPIIYFLQAVKK---SKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLH 166 (1152)
Q Consensus 104 w~~~~~~~~-------------~~~~~l~~l~qal~~---~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~ 166 (1152)
-........ -++.+.+++.|++.. ..-..+++.++....... .....+...-+++.+|.|+++
T Consensus 84 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA 163 (248)
T d2d1ya1 84 AAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLA 163 (248)
T ss_dssp CCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHH
Confidence 654222111 124667778777432 222345555544322221 222333444467899999999
Q ss_pred HHcCCCcEEEEEec
Q psy616 167 IIMPETQISIVFAE 180 (1152)
Q Consensus 167 ~e~p~~~~~~vd~~ 180 (1152)
.|+-...+++--+.
T Consensus 164 ~el~~~gIrVN~I~ 177 (248)
T d2d1ya1 164 LDLAPLRIRVNAVA 177 (248)
T ss_dssp HHHGGGTEEEEEEE
T ss_pred HHhhhhCcEEEEEe
Confidence 99975444443333
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=95.28 E-value=0.079 Score=54.82 Aligned_cols=151 Identities=9% Similarity=0.072 Sum_probs=97.0
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----c--CCCccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----P--NDTVHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----~--~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
++++.||.....|++.++++.|.++|. |+.+... ..... + ..-..+..+-.++++.+++++++.++.+.+|.
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 82 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADIN-LEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI 82 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC-HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 567889999999999999999988876 4444332 11111 0 11123677888999999999999999999999
Q ss_pred EEEeCCCCCcccc-------------cChHHHHHHHHHHH----hCCCCceEEEEEcccccc-cCCccchhhhHHHHHHH
Q psy616 100 VFYLWPLEDKNCI-------------YNIMPIIYFLQAVK----KSKLYLRKLIISGISINK-KNEEDLYYCYFNSWVAF 161 (1152)
Q Consensus 100 iv~lw~~~~~~~~-------------~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~g~ 161 (1152)
+||.-........ -++.+.+++.|++. +.+...+++.++...... ......+...-+++.+|
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 162 (256)
T d1k2wa_ 83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISL 162 (256)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHH
Confidence 9998665322111 12456777777633 222234555554432222 12223344445678999
Q ss_pred HHHHHHHcCC--CcEEEEE
Q psy616 162 ERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 162 ~r~~~~e~p~--~~~~~vd 178 (1152)
.|+++.|+-. +++.+|.
T Consensus 163 t~~lA~el~~~gIrVN~V~ 181 (256)
T d1k2wa_ 163 TQSAGLNLIRHGINVNAIA 181 (256)
T ss_dssp HHHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHHhcccCeEEEEEe
Confidence 9999999864 5555553
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=95.12 E-value=0.059 Score=55.54 Aligned_cols=155 Identities=10% Similarity=0.009 Sum_probs=98.1
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccc----ccCCCc--cEEEcCCChhhHHHHHHHHHhcCCCcC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKI----SPNDTV--HYKINKDNINDYTFILNKIYEKDKKID 98 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~----~~~~~~--~~~i~p~~~~d~~~l~~~l~~~~~~~~ 98 (1152)
.+.+..||.....|++.++++.|.++|. |+++...+.... ...... .|..+-.++++.+++++++.++.+.+|
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD 82 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 82 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 3567788888899999999999988776 444443321111 111111 367788899999999999999989999
Q ss_pred EEEEeCCCCCcccc-----c--------ChHHHHHHHHHHHhC---CCCceEEEEEccccccc-CCccchhhhHHHHHHH
Q psy616 99 SVFYLWPLEDKNCI-----Y--------NIMPIIYFLQAVKKS---KLYLRKLIISGISINKK-NEEDLYYCYFNSWVAF 161 (1152)
Q Consensus 99 ~iv~lw~~~~~~~~-----~--------~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~ 161 (1152)
.+||.-........ + ++.+.+++.|++... ....+++.++....... .....+...-+++.+|
T Consensus 83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 162 (247)
T d2ew8a1 83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGF 162 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHH
Confidence 99997665322111 1 246777777774321 12345555554322222 2223344455678999
Q ss_pred HHHHHHHcCCCcEEEEEec
Q psy616 162 ERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 162 ~r~~~~e~p~~~~~~vd~~ 180 (1152)
.|+++.|+-...+++-.+.
T Consensus 163 tk~lA~ela~~gIrVN~I~ 181 (247)
T d2ew8a1 163 TRALASDLGKDGITVNAIA 181 (247)
T ss_dssp HHHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHHhcccCeEEEEEe
Confidence 9999999964434443333
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=95.12 E-value=0.036 Score=53.49 Aligned_cols=85 Identities=21% Similarity=0.208 Sum_probs=55.4
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.+++|+| .|++|+..++.+...|+ +|+.+.+++. ..+..++.|....+. .|-. .++.....+.+....
T Consensus 23 ~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga-~vi~v~~~~~---r~~~a~~~ga~~~~~-~~~~-~~~~~~~~~~~~~~~ 95 (170)
T d1e3ja2 23 GVQLGTTVLVIG-AGPIGLVSVLAAKAYGA-FVVCTARSPR---RLEVAKNCGADVTLV-VDPA-KEEESSIIERIRSAI 95 (170)
T ss_dssp TCCTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEESCHH---HHHHHHHTTCSEEEE-CCTT-TSCHHHHHHHHHHHS
T ss_pred CCCCCCEEEEEc-ccccchhhHhhHhhhcc-cccccchHHH---HHHHHHHcCCcEEEe-cccc-ccccchhhhhhhccc
Confidence 357788999996 68999999998888887 5666666543 334455667665433 2222 122333444554444
Q ss_pred C-CeeEEEEcccc
Q psy616 312 G-PIDGVLHIAGI 323 (1152)
Q Consensus 312 G-~idgvIh~AG~ 323 (1152)
| .+|.+|.++|.
T Consensus 96 g~g~D~vid~~g~ 108 (170)
T d1e3ja2 96 GDLPNVTIDCSGN 108 (170)
T ss_dssp SSCCSEEEECSCC
T ss_pred ccCCceeeecCCC
Confidence 4 68999999975
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=94.93 E-value=0.06 Score=55.33 Aligned_cols=151 Identities=15% Similarity=0.147 Sum_probs=97.7
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc------cCCCccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS------PNDTVHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~------~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
+++..||.....|++.+++++|.+.|. |+..... ..... ...-..|..+-.++++.+++++.+.++.+.+|.
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~-~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATS-ENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI 81 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence 467788888899999999999988876 4444333 21111 111124778888999999999999999999999
Q ss_pred EEEeCCCCCcccc-------------cChHHHHHHHHHHHhC---CCCceEEEEEcccccc-cCCccchhhhHHHHHHHH
Q psy616 100 VFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKS---KLYLRKLIISGISINK-KNEEDLYYCYFNSWVAFE 162 (1152)
Q Consensus 100 iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~g~~ 162 (1152)
+||.-........ -++.+.+++.|++... ....+++.++...... ......+...-+++.+|.
T Consensus 82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt 161 (243)
T d1q7ba_ 82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFS 161 (243)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHH
Confidence 9997654322111 1246777787774322 1234555555432222 122334445556789999
Q ss_pred HHHHHHcCC--CcEEEEE
Q psy616 163 RSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 163 r~~~~e~p~--~~~~~vd 178 (1152)
|+++.|+-. +++..|.
T Consensus 162 ~~lA~ela~~gIrVN~I~ 179 (243)
T d1q7ba_ 162 KSLAREVASRGITVNVVA 179 (243)
T ss_dssp HHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHhCccCeEEEEEe
Confidence 999999964 4554443
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.88 E-value=0.16 Score=52.26 Aligned_cols=149 Identities=9% Similarity=-0.003 Sum_probs=94.1
Q ss_pred ceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccc-------ccCCC--ccEEEcCCChhhHHHHHHHHHhcCCCcC
Q psy616 29 NNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKI-------SPNDT--VHYKINKDNINDYTFILNKIYEKDKKID 98 (1152)
Q Consensus 29 ~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~-------~~~~~--~~~~i~p~~~~d~~~l~~~l~~~~~~~~ 98 (1152)
+..||.....|++.+++++|.+.|. |+.+... .... ..... ..|..+-.++++..++++.+.++.+.+|
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~-~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYN-DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 3468888899999999999988876 4444432 1111 11111 2367788899999999999999999999
Q ss_pred EEEEeCCCCCcccc-------------cChHHHHHHHHHHH----hCCCCceEEEEEcccc-cccCCccchhhhHHHHHH
Q psy616 99 SVFYLWPLEDKNCI-------------YNIMPIIYFLQAVK----KSKLYLRKLIISGISI-NKKNEEDLYYCYFNSWVA 160 (1152)
Q Consensus 99 ~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~g 160 (1152)
.+||.-+....... -++.+.++++|+.. ..+....++.++.... ........+...-+++.+
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 160 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG 160 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence 99997654222111 12457778877732 3332334444443222 112223334444567899
Q ss_pred HHHHHHHHcCC--CcEEEEE
Q psy616 161 FERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 161 ~~r~~~~e~p~--~~~~~vd 178 (1152)
|.|+++.|+-. +++..|.
T Consensus 161 ltk~lA~el~~~gIrVN~I~ 180 (255)
T d1gega_ 161 LTQTAARDLAPLGITVNGYC 180 (255)
T ss_dssp HHHHHHHHHGGGTEEEEEEE
T ss_pred hHHHHHHHhhhhCcEEEEEe
Confidence 99999999864 5555543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.82 E-value=0.058 Score=52.06 Aligned_cols=84 Identities=14% Similarity=0.255 Sum_probs=58.7
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.+++|.|+ |++|...+..+...|+.+|+.+.+++.. .+..++.|....+ ..+-.+..+..+.+.. .+
T Consensus 23 ~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~r---l~~a~~~Ga~~~~-~~~~~~~~~~~~~~~~---~~ 94 (171)
T d1pl8a2 23 GVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATR---LSKAKEIGADLVL-QISKESPQEIARKVEG---QL 94 (171)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH---HHHHHHTTCSEEE-ECSSCCHHHHHHHHHH---HH
T ss_pred CCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHH---HHHHHHhCCcccc-cccccccccccccccc---cC
Confidence 3567889999976 9999999999999999888888877533 3344566776433 3333455444444433 34
Q ss_pred C-CeeEEEEcccc
Q psy616 312 G-PIDGVLHIAGI 323 (1152)
Q Consensus 312 G-~idgvIh~AG~ 323 (1152)
| .+|.+|.+.|.
T Consensus 95 g~g~Dvvid~~G~ 107 (171)
T d1pl8a2 95 GCKPEVTIECTGA 107 (171)
T ss_dssp TSCCSEEEECSCC
T ss_pred CCCceEEEeccCC
Confidence 4 69999999985
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=94.79 E-value=0.091 Score=54.31 Aligned_cols=151 Identities=7% Similarity=-0.017 Sum_probs=97.9
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----cCC--CccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----PND--TVHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----~~~--~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
++++.||.....|++.+++++|.++|. |+.+.... .... ... -..+..+-.++++.+++++.+.++.+.+|.
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD-EEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence 567889999999999999999988876 54444321 1111 111 124778888999999999999999889999
Q ss_pred EEEeCCCCCcccc-------------cChHHHHHHHHHHHhC---CCCceEEEEEcccc-cccCCccchhhhHHHHHHHH
Q psy616 100 VFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKS---KLYLRKLIISGISI-NKKNEEDLYYCYFNSWVAFE 162 (1152)
Q Consensus 100 iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~g~~ 162 (1152)
+||.-........ -++.+.+++.|++... ....+++.++.... ........+...-+++.+|.
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt 162 (254)
T d1hdca_ 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLS 162 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHH
Confidence 9997665322111 1235677777764321 22455555554322 12222334455557789999
Q ss_pred HHHHHHcCC--CcEEEEE
Q psy616 163 RSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 163 r~~~~e~p~--~~~~~vd 178 (1152)
|+++.|+-. +++..|.
T Consensus 163 ~~lA~e~a~~gIrVN~I~ 180 (254)
T d1hdca_ 163 KLAAVELGTDRIRVNSVH 180 (254)
T ss_dssp HHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHhCCCceEEEEee
Confidence 999999864 5555553
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.77 E-value=0.12 Score=52.93 Aligned_cols=152 Identities=9% Similarity=0.011 Sum_probs=97.3
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc------cCCCccEEEcCCChhhHHHHHHHHHhcCCCcC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS------PNDTVHYKINKDNINDYTFILNKIYEKDKKID 98 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~------~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~ 98 (1152)
..++..||.....|++.++++.|.+.|. |+.+... ..... ...-..+..+-.++++.+++++.+.++.+.+|
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL-DEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH 82 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence 4678889999999999999999988876 5444432 11111 01112366778899999999999999988999
Q ss_pred EEEEeCCCCCcccc-------------cChHHHHHHHHHHHh---CCCCceEEEEEcccccc-cCCccchhhhHHHHHHH
Q psy616 99 SVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKK---SKLYLRKLIISGISINK-KNEEDLYYCYFNSWVAF 161 (1152)
Q Consensus 99 ~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~---~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~g~ 161 (1152)
.+||.-........ -++.+.+++.|++.. .+...+++.++...... ......+...-+++.+|
T Consensus 83 ilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l 162 (244)
T d1nffa_ 83 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL 162 (244)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHH
Confidence 99998665322111 124567777775322 12244555555432222 12233344455678999
Q ss_pred HHHHHHHcCC--CcEEEEE
Q psy616 162 ERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 162 ~r~~~~e~p~--~~~~~vd 178 (1152)
.|+++.|+-. +++..|.
T Consensus 163 tk~lA~el~~~gIrVN~I~ 181 (244)
T d1nffa_ 163 TKSTALELGPSGIRVNSIH 181 (244)
T ss_dssp HHHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHHhcccCEEEEEEe
Confidence 9999999964 5554443
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.55 E-value=0.17 Score=53.43 Aligned_cols=154 Identities=11% Similarity=0.006 Sum_probs=96.7
Q ss_pred cccCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccc-------c----cC-C-C-ccEEEcCCChhhHHHHHH
Q psy616 24 SKVKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKI-------S----PN-D-T-VHYKINKDNINDYTFILN 88 (1152)
Q Consensus 24 ~~~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~-------~----~~-~-~-~~~~i~p~~~~d~~~l~~ 88 (1152)
...+++..||.....|++.+++++|.+.|. |+++... .... . .. . . ..|..+-.++++..++++
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~-~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 86 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK-LERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 86 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence 446888999999999999999999988876 4444332 1111 0 00 1 1 136778889999999999
Q ss_pred HHHhcCCCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHhCC---CCceEEEEEcccccccCCccchh
Q psy616 89 KIYEKDKKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKSK---LYLRKLIISGISINKKNEEDLYY 152 (1152)
Q Consensus 89 ~l~~~~~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~~---~~~~~~~v~~~~~~~~~~~~~~~ 152 (1152)
.+.+..+.+|.+||.-........ -++.+.++++|++...- ....++.++............+.
T Consensus 87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~~~~~Y~ 166 (297)
T d1yxma1 87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSG 166 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHH
T ss_pred HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccccccccch
Confidence 999998899999997554221111 12467788888754321 12333333322221111222233
Q ss_pred hhHHHHHHHHHHHHHHcC--CCcEEEEE
Q psy616 153 CYFNSWVAFERSLHIIMP--ETQISIVF 178 (1152)
Q Consensus 153 ~~~~~~~g~~r~~~~e~p--~~~~~~vd 178 (1152)
..-+++.+|.|+++.|+- ++++.+|.
T Consensus 167 asKaal~~ltk~lA~el~~~gIrVN~I~ 194 (297)
T d1yxma1 167 AARAGVYNLTKSLALEWACSGIRINCVA 194 (297)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHhcccCceEEEee
Confidence 344678999999999996 45555553
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=94.55 E-value=0.049 Score=52.86 Aligned_cols=84 Identities=12% Similarity=0.149 Sum_probs=57.5
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
..++++.+++|.|+ |++|...+..+...|+.+++.+.+++... +..++.|..- + .|..++ ++.+.+.++..
T Consensus 24 ~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~---~~a~~~Ga~~-~--i~~~~~-~~~~~i~~~t~- 94 (174)
T d1f8fa2 24 LKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL---ELAKQLGATH-V--INSKTQ-DPVAAIKEITD- 94 (174)
T ss_dssp TCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH---HHHHHHTCSE-E--EETTTS-CHHHHHHHHTT-
T ss_pred hCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHH---HHHHHcCCeE-E--EeCCCc-CHHHHHHHHcC-
Confidence 35678999999987 89999999999889999988887765333 3344556542 2 244443 23333444322
Q ss_pred cCCeeEEEEccccc
Q psy616 311 IGPIDGVLHIAGIS 324 (1152)
Q Consensus 311 ~G~idgvIh~AG~~ 324 (1152)
|.+|.+|.+.|..
T Consensus 95 -gg~D~vid~~G~~ 107 (174)
T d1f8fa2 95 -GGVNFALESTGSP 107 (174)
T ss_dssp -SCEEEEEECSCCH
T ss_pred -CCCcEEEEcCCcH
Confidence 5799999999853
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=94.53 E-value=0.049 Score=52.73 Aligned_cols=77 Identities=14% Similarity=0.094 Sum_probs=50.3
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.++||+||+|++|+..++.....|+++++.. +++... +.+++.|....+ |..+. ..++. ..
T Consensus 24 ~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~-~~~~~~---~~~~~lGa~~~i---~~~~~------~~~~~-~~ 89 (171)
T d1iz0a2 24 QARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAA-SRPEKL---ALPLALGAEEAA---TYAEV------PERAK-AW 89 (171)
T ss_dssp TCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEE-SSGGGS---HHHHHTTCSEEE---EGGGH------HHHHH-HT
T ss_pred CCCCCCEEEEEeccccchhhhhhhhccccccccccc-cccccc---ccccccccceee---ehhhh------hhhhh-cc
Confidence 467899999999999999999888777788554444 443222 334556765432 33321 12222 23
Q ss_pred CCeeEEEEccc
Q psy616 312 GPIDGVLHIAG 322 (1152)
Q Consensus 312 G~idgvIh~AG 322 (1152)
..+|.||.+.|
T Consensus 90 ~g~D~v~d~~G 100 (171)
T d1iz0a2 90 GGLDLVLEVRG 100 (171)
T ss_dssp TSEEEEEECSC
T ss_pred ccccccccccc
Confidence 56999999776
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=94.51 E-value=0.22 Score=51.06 Aligned_cols=152 Identities=10% Similarity=0.124 Sum_probs=98.3
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCcEEEEecCCccccc--------cCC-C-ccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIKIS--------PND-T-VHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~~~~~~~~~--------~~~-~-~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
+++..||.....|++.+++++|.+.|.-|++...+..... ... + ..|..+-.++++.+++++++.++.+.
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 83 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678899999999999999999888764444333211110 111 1 23677888999999999999999899
Q ss_pred cCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHh---CCCCceEEEEEcccc-cccC-CccchhhhHHHH
Q psy616 97 IDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKK---SKLYLRKLIISGISI-NKKN-EEDLYYCYFNSW 158 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~---~~~~~~~~~v~~~~~-~~~~-~~~~~~~~~~~~ 158 (1152)
+|.+||.-........ -++.+.+++.|++.. .....+++.++.... .... ....+...-+++
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal 163 (251)
T d1vl8a_ 84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV 163 (251)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhH
Confidence 9999997665322111 134677888887432 222445555544222 2121 122344445778
Q ss_pred HHHHHHHHHHcCC--CcEEEEE
Q psy616 159 VAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 159 ~g~~r~~~~e~p~--~~~~~vd 178 (1152)
.+|.|+++.|+.. +++-.|.
T Consensus 164 ~~lt~~lA~e~~~~gIrVN~I~ 185 (251)
T d1vl8a_ 164 ASLTKALAKEWGRYGIRVNVIA 185 (251)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEE
T ss_pred HHHHHHHHHHhcccCeEEEEEe
Confidence 9999999999964 6665554
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=94.43 E-value=0.27 Score=50.60 Aligned_cols=151 Identities=10% Similarity=0.056 Sum_probs=96.0
Q ss_pred ceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------cCC--CccEEEcCCChhhHHHHHHHHHhcCCCcC
Q psy616 29 NNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------PND--TVHYKINKDNINDYTFILNKIYEKDKKID 98 (1152)
Q Consensus 29 ~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~~~--~~~~~i~p~~~~d~~~l~~~l~~~~~~~~ 98 (1152)
+..||.....|++.+++++|.+.|. |+.+... ..... ... -..+..+-.++++.+.+++.+.++.+.+|
T Consensus 3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~-~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARG-EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4568888899999999999988876 4444432 11111 111 12377788899999999999999999999
Q ss_pred EEEEeCCCCCcccc-------------cChHHHHHHHHHHHhCC-----CCceEEEEEcccccc-cCCccchhhhHHHHH
Q psy616 99 SVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKSK-----LYLRKLIISGISINK-KNEEDLYYCYFNSWV 159 (1152)
Q Consensus 99 ~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~~-----~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~ 159 (1152)
.+|+.-........ -++.+.+++.|++.... ...+++.++...... ......+...-+++.
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~ 161 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV 161 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence 99997655222111 13467888999865431 123344443322111 122233444556789
Q ss_pred HHHHHHHHHcCCCcEEEEEec
Q psy616 160 AFERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 160 g~~r~~~~e~p~~~~~~vd~~ 180 (1152)
+|.|+++.|+-...+++--+.
T Consensus 162 ~ltk~lA~el~~~gIrVN~I~ 182 (257)
T d2rhca1 162 GFTKALGLELARTGITVNAVC 182 (257)
T ss_dssp HHHHHHHHHTTTSEEEEEEEE
T ss_pred HHHHHHHHHhhhhCcEEEEEe
Confidence 999999999975444443333
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=94.38 E-value=0.034 Score=54.15 Aligned_cols=84 Identities=17% Similarity=0.175 Sum_probs=55.6
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.+++|.|+ ||+|+..++++...|+.+|+.+.+++... +..++.|.... +|..+++..+ .+.++.. .
T Consensus 24 ~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~---~~a~~lGa~~~---i~~~~~~~~~-~v~~~t~-g 94 (174)
T d1jqba2 24 DIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICV---EAAKFYGATDI---LNYKNGHIED-QVMKLTN-G 94 (174)
T ss_dssp TCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHH---HHHHHHTCSEE---ECGGGSCHHH-HHHHHTT-T
T ss_pred CCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhH---HHHHhhCcccc---ccccchhHHH-HHHHHhh-c
Confidence 4678899999975 99999999999989998888888765333 33445575432 3444433332 2333222 1
Q ss_pred CCeeEEEEccccc
Q psy616 312 GPIDGVLHIAGIS 324 (1152)
Q Consensus 312 G~idgvIh~AG~~ 324 (1152)
..+|.+|.++|..
T Consensus 95 ~G~D~vid~~g~~ 107 (174)
T d1jqba2 95 KGVDRVIMAGGGS 107 (174)
T ss_dssp SCEEEEEECSSCT
T ss_pred cCcceEEEccCCH
Confidence 2599999999863
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.37 E-value=0.12 Score=53.38 Aligned_cols=152 Identities=10% Similarity=0.045 Sum_probs=96.1
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCcEEEEecCCccc-------cccCC--CccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIK-------ISPND--TVHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~~~~~~~-------~~~~~--~~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
.+++..||.....|++.+++++|.+.|.-+++..-.... +.... -..+..+-.++++.+++++.+.+..+.
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~ 88 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 357788998899999999999998887644443332211 11111 123677778999999999999999889
Q ss_pred cCEEEEeCCCCCcccc----c--------ChHHHHHHHHHHHh----CCCCceEEEEEcccc-cccCCccchhhhHHHHH
Q psy616 97 IDSVFYLWPLEDKNCI----Y--------NIMPIIYFLQAVKK----SKLYLRKLIISGISI-NKKNEEDLYYCYFNSWV 159 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~~----~--------~~~~l~~l~qal~~----~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~ 159 (1152)
+|.+||.-........ + ++.+.+++.|++.. .+ ..+++.++.... ........+...-+++.
T Consensus 89 iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~~~~~Y~asKaal~ 167 (255)
T d1fmca_ 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAAAS 167 (255)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccccccccchhHHHHHH
Confidence 9999997654222111 1 24567777776432 22 334444443222 11122334445557789
Q ss_pred HHHHHHHHHcCC--CcEEEEE
Q psy616 160 AFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 160 g~~r~~~~e~p~--~~~~~vd 178 (1152)
+|.|+++.|+-. +++..|.
T Consensus 168 ~lt~~lA~el~~~gIrVN~I~ 188 (255)
T d1fmca_ 168 HLVRNMAFDLGEKNIRVNGIA 188 (255)
T ss_dssp HHHHHHHHHHHTTTEEEEEEE
T ss_pred HHHHHHHHHhCccCeEEEEee
Confidence 999999999854 5555543
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=94.32 E-value=0.05 Score=52.79 Aligned_cols=86 Identities=15% Similarity=0.081 Sum_probs=59.8
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
..++++.+++|.|+ ||+|...+.++...|+.+|+.+.+++...+.. ++.|..-.+...|-. +.+.+......
T Consensus 24 ~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a---~~~Ga~~~i~~~~~~--~~~~~~~~~~~-- 95 (176)
T d2jhfa2 24 AKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA---KEVGATECVNPQDYK--KPIQEVLTEMS-- 95 (176)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH---HHTTCSEEECGGGCS--SCHHHHHHHHT--
T ss_pred hCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH---HHhCCeeEEecCCch--hHHHHHHHHHh--
Confidence 45789999999998 78999999999999999999999887654443 345655333222222 23444444332
Q ss_pred cCCeeEEEEccccc
Q psy616 311 IGPIDGVLHIAGIS 324 (1152)
Q Consensus 311 ~G~idgvIh~AG~~ 324 (1152)
.+.+|.+|-+.|..
T Consensus 96 ~~G~D~vid~~G~~ 109 (176)
T d2jhfa2 96 NGGVDFSFEVIGRL 109 (176)
T ss_dssp TSCBSEEEECSCCH
T ss_pred cCCCCEEEecCCch
Confidence 25799999998864
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.28 E-value=0.073 Score=51.41 Aligned_cols=85 Identities=14% Similarity=0.060 Sum_probs=58.5
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
..++++.+++|.|+ ||+|...++.+...|+++|+.+.+++...+..++ .|..-.+..-| +.+.+.+.+....
T Consensus 24 ~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~---lGa~~~i~~~~--~~~~~~~~~~~~~-- 95 (176)
T d2fzwa2 24 AKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE---FGATECINPQD--FSKPIQEVLIEMT-- 95 (176)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH---HTCSEEECGGG--CSSCHHHHHHHHT--
T ss_pred hCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH---hCCcEEEeCCc--hhhHHHHHHHHHc--
Confidence 45789999999987 6899999999999999999999888765555444 46543322111 1233444444432
Q ss_pred cCCeeEEEEcccc
Q psy616 311 IGPIDGVLHIAGI 323 (1152)
Q Consensus 311 ~G~idgvIh~AG~ 323 (1152)
.+.+|.+|.+.|.
T Consensus 96 ~~g~D~vid~~G~ 108 (176)
T d2fzwa2 96 DGGVDYSFECIGN 108 (176)
T ss_dssp TSCBSEEEECSCC
T ss_pred CCCCcEeeecCCC
Confidence 2479999999875
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=94.19 E-value=0.17 Score=52.37 Aligned_cols=153 Identities=8% Similarity=-0.002 Sum_probs=97.6
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccc-------ccCCC--ccEEEcCCChhhHHHHHHHHHhcCC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKI-------SPNDT--VHYKINKDNINDYTFILNKIYEKDK 95 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~-------~~~~~--~~~~i~p~~~~d~~~l~~~l~~~~~ 95 (1152)
.+++..||.....|++.+++++|.++|. |+++........ ..... ..|..|-.++++.+++++.+.++.+
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 84 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3567788888899999999999988875 555443321111 11111 2367788899999999999999988
Q ss_pred CcCEEEEeCCCCCcccc-------------cChHHHHHHHHHH----HhCCCCceEEEEEccccccc-CCccchhhhHHH
Q psy616 96 KIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAV----KKSKLYLRKLIISGISINKK-NEEDLYYCYFNS 157 (1152)
Q Consensus 96 ~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal----~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~ 157 (1152)
.+|.+||.-........ -++.+.+++.|++ .+.+....++.++....... .....+...-++
T Consensus 85 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaa 164 (261)
T d1geea_ 85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGG 164 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCcc
Confidence 99999998765322111 1245667777763 33443333444544322221 222334455577
Q ss_pred HHHHHHHHHHHcCC--CcEEEEE
Q psy616 158 WVAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 158 ~~g~~r~~~~e~p~--~~~~~vd 178 (1152)
+.+|.|+++.|+-. +++..|.
T Consensus 165 l~~lt~~lA~e~~~~gIrVN~I~ 187 (261)
T d1geea_ 165 MKLMTETLALEYAPKGIRVNNIG 187 (261)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEE
T ss_pred chhhHHHHHHHhhhhCcEEEEEe
Confidence 89999999999963 6666654
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=94.15 E-value=0.14 Score=52.30 Aligned_cols=153 Identities=6% Similarity=0.042 Sum_probs=96.9
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCcEEEEecCCcccc----ccCCCc--cEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIKI----SPNDTV--HYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~~~~~~~~----~~~~~~--~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
..+++.||.....+++.+++++|.++|.-|++........ .+.... .|..+-.++++.+++++.+.+..+.+|.
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 3578889999999999999999988876444443322221 112222 3667888999999999999999999999
Q ss_pred EEEeCCCCCcccc-------------cChHHHHHHHHHHHhCCCCceEEEEE-cccccccCCccchhhhHHHHHHHHHHH
Q psy616 100 VFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKSKLYLRKLIIS-GISINKKNEEDLYYCYFNSWVAFERSL 165 (1152)
Q Consensus 100 iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~g~~r~~ 165 (1152)
+||.-........ -++.+.+.+.|++..........++. ..+.........+...-+++.+|.|++
T Consensus 83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~~~Y~~sK~al~~lt~~l 162 (241)
T d2a4ka1 83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTL 162 (241)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHHHHHHHH
T ss_pred eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCccccchhhHHHHHHHHHH
Confidence 9996543221111 12467788888865443333333333 332221111122233335689999999
Q ss_pred HHHcCC--CcEEEEE
Q psy616 166 HIIMPE--TQISIVF 178 (1152)
Q Consensus 166 ~~e~p~--~~~~~vd 178 (1152)
+.|+-. +++.+|.
T Consensus 163 A~el~~~gIrvN~I~ 177 (241)
T d2a4ka1 163 ALELARKGVRVNVLL 177 (241)
T ss_dssp HHHHTTTTCEEEEEE
T ss_pred HHHHhHhCCEEeeec
Confidence 999874 6666654
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=94.09 E-value=0.082 Score=51.04 Aligned_cols=83 Identities=13% Similarity=0.138 Sum_probs=56.3
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.+++|.|+ |++|...++.+...|+.+++.+.+++. ..+.+++.|.... + |-. .+.++...+... .
T Consensus 29 ~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~---k~~~~~~~ga~~~-i--~~~-~~~~~~~~~~~~--~ 98 (172)
T d1h2ba2 29 TLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEE---KLKLAERLGADHV-V--DAR-RDPVKQVMELTR--G 98 (172)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHH---HHHHHHHTTCSEE-E--ETT-SCHHHHHHHHTT--T
T ss_pred ccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhH---HHHHHhhccccee-e--cCc-ccHHHHHHHhhC--C
Confidence 3578899999875 999999999998899989888877753 3444556676532 2 332 234444443221 2
Q ss_pred CCeeEEEEccccc
Q psy616 312 GPIDGVLHIAGIS 324 (1152)
Q Consensus 312 G~idgvIh~AG~~ 324 (1152)
..+|.+|.++|..
T Consensus 99 ~g~d~vid~~g~~ 111 (172)
T d1h2ba2 99 RGVNVAMDFVGSQ 111 (172)
T ss_dssp CCEEEEEESSCCH
T ss_pred CCceEEEEecCcc
Confidence 3699999999853
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=94.02 E-value=0.13 Score=53.27 Aligned_cols=154 Identities=12% Similarity=0.031 Sum_probs=98.3
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCcEEEEe-cCCccc-------cccCC--CccEEEcCCChhhHHHHHHHHHhcCC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTDIIFIE-QSDNIK-------ISPND--TVHYKINKDNINDYTFILNKIYEKDK 95 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~-~~~~~~-------~~~~~--~~~~~i~p~~~~d~~~l~~~l~~~~~ 95 (1152)
..++++||+....|++.++++.|.++|.-+++. ..+... +.... -..|..+..++++...+++.+.++.+
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 83 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence 467889999999999999999998887634443 221111 11111 12377788899999999999999999
Q ss_pred CcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHhCCC-CceEEEEEcccccc--cCCccchhhhHHHHH
Q psy616 96 KIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKSKL-YLRKLIISGISINK--KNEEDLYYCYFNSWV 159 (1152)
Q Consensus 96 ~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~~~-~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~ 159 (1152)
.+|.+||.-........ -++.+.++++|++...-. .....+++...... ......+...-+++.
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~al~ 163 (259)
T d1ja9a_ 84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVE 163 (259)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHHH
T ss_pred CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHHHHH
Confidence 99999997665322111 124577788887543221 23334443322111 122233344456789
Q ss_pred HHHHHHHHHcC--CCcEEEEEe
Q psy616 160 AFERSLHIIMP--ETQISIVFA 179 (1152)
Q Consensus 160 g~~r~~~~e~p--~~~~~~vd~ 179 (1152)
+|+|+++.|+- ++++.+|.-
T Consensus 164 ~l~r~lA~e~~~~gIrvN~I~P 185 (259)
T d1ja9a_ 164 GFCRAFAVDCGAKGVTVNCIAP 185 (259)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEE
T ss_pred HHHHHHHHHHhhcCeEEeccCc
Confidence 99999999985 466666644
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=93.99 E-value=0.33 Score=49.75 Aligned_cols=152 Identities=7% Similarity=0.017 Sum_probs=95.4
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccc-------ccCCC-ccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKI-------SPNDT-VHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~-------~~~~~-~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
.+++..||.....|++.+++++|.++|. |+++... .... ..... ..|..+-.++++.+++++.+.+..+.
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 82 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH-SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3578889989999999999999988776 5444432 1111 11111 23667788999999999999999999
Q ss_pred cCEEEEeCCCCCcccc-------------cChHHHHHHHHHHH----hCCCCceEEEEEccccccc-CCccchhhhHHHH
Q psy616 97 IDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVK----KSKLYLRKLIISGISINKK-NEEDLYYCYFNSW 158 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~ 158 (1152)
+|.+||.-........ -++.+.+++.|+.. +.+...+++.++....... .....+...-+++
T Consensus 83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal 162 (251)
T d1zk4a1 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV 162 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHH
Confidence 9999997655322111 12457777877743 2222234444543221111 1223344445668
Q ss_pred HHHHHHHHHHc--C--CCcEEEEE
Q psy616 159 VAFERSLHIIM--P--ETQISIVF 178 (1152)
Q Consensus 159 ~g~~r~~~~e~--p--~~~~~~vd 178 (1152)
.+|.|+++.|+ - ++++..|-
T Consensus 163 ~~lt~~lA~e~~l~~~gIrVN~I~ 186 (251)
T d1zk4a1 163 RIMSKSAALDCALKDYDVRVNTVH 186 (251)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred hcchHHHHHHHhcCCCcEEEEEEe
Confidence 89999999984 2 46665553
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=93.99 E-value=0.32 Score=50.04 Aligned_cols=152 Identities=11% Similarity=0.020 Sum_probs=94.9
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------cCCC--ccEEEcCCChhhHHHHHHHHHhcC-
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------PNDT--VHYKINKDNINDYTFILNKIYEKD- 94 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~~~~--~~~~i~p~~~~d~~~l~~~l~~~~- 94 (1152)
..++..||.....|++.+++++|.++|. |+.+... ..... .... ..+..+-.++++.+++++++.++.
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN-QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 84 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 3577889999999999999999988876 5444432 21111 1111 136677789999999999987774
Q ss_pred CCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHh---CCCCceEEEEEcccccc-cCCccchhhhHHH
Q psy616 95 KKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKK---SKLYLRKLIISGISINK-KNEEDLYYCYFNS 157 (1152)
Q Consensus 95 ~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~---~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~ 157 (1152)
..+|.+||.-........ -++.+.+++.|++.. .....+++.++...... ......+...-++
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 164 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGA 164 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHH
Confidence 479999997654222111 124566777776432 22245555555432221 1222334444577
Q ss_pred HHHHHHHHHHHcCC--CcEEEEE
Q psy616 158 WVAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 158 ~~g~~r~~~~e~p~--~~~~~vd 178 (1152)
+.+|+|+++.|+-. +++..|.
T Consensus 165 l~~lt~~lA~el~~~gIrVN~I~ 187 (259)
T d2ae2a_ 165 MDQLTRCLAFEWAKDNIRVNGVG 187 (259)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEE
T ss_pred HHHHHHHHHHHhCcCceEEEEee
Confidence 89999999999964 4554443
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.98 E-value=0.03 Score=55.17 Aligned_cols=79 Identities=13% Similarity=0.119 Sum_probs=51.5
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCee
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPID 315 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~id 315 (1152)
+.++||+||+||+|...++..-..|+.+|+.+.+++.. .....+..|.... .|..++ ++.+.+.++.. ..+|
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~--~~~l~~~~gad~v---i~~~~~-~~~~~~~~~~~--~GvD 102 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEK--CLFLTSELGFDAA---VNYKTG-NVAEQLREACP--GGVD 102 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHH--HHHHHHHSCCSEE---EETTSS-CHHHHHHHHCT--TCEE
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHH--HhhhhhcccceEE---eeccch-hHHHHHHHHhc--cCce
Confidence 38999999999999999888777898888876665322 2222234566533 244443 33444444432 3599
Q ss_pred EEEEccc
Q psy616 316 GVLHIAG 322 (1152)
Q Consensus 316 gvIh~AG 322 (1152)
.||.+.|
T Consensus 103 vv~D~vG 109 (187)
T d1vj1a2 103 VYFDNVG 109 (187)
T ss_dssp EEEESSC
T ss_pred EEEecCC
Confidence 9999886
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=93.91 E-value=0.035 Score=46.16 Aligned_cols=47 Identities=19% Similarity=0.208 Sum_probs=33.6
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKL 280 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l 280 (1152)
.+++.++||+||+||+|....+.+...|++ |+.+.+++...+..++|
T Consensus 29 ~~~~~~vlI~gasGgVG~~aiQlak~~G~~-Vi~~t~s~~k~~~~~~l 75 (77)
T d1o8ca2 29 RPQDGEIVVTGASGGVGSTAVALLHKLGYQ-VVAVSGRESTHEYLKSL 75 (77)
T ss_dssp CGGGCEEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCGGGHHHHHHH
T ss_pred ccCCCcEEEEeCCCcHHHHHHHHHHHcCCe-EEEEECCHHHHHHHHHC
Confidence 457889999999999999988877777775 55445554444444443
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=93.89 E-value=0.17 Score=51.59 Aligned_cols=151 Identities=11% Similarity=0.129 Sum_probs=92.6
Q ss_pred ceEEEEecCchhHHHHHHHHccCCc--------EEEEecCCcccc-------ccCCC--ccEEEcCCChhhHHHHHHHHH
Q psy616 29 NNLLCFSSNKDFQNKIVESISSYTD--------IIFIEQSDNIKI-------SPNDT--VHYKINKDNINDYTFILNKIY 91 (1152)
Q Consensus 29 ~~~lvf~d~~~~~~~l~~~l~~~~~--------~~~v~~~~~~~~-------~~~~~--~~~~i~p~~~~d~~~l~~~l~ 91 (1152)
+.+||.....|++.+++++|.+.|. ++..... .... ..... ..+..+-.++++..++++++.
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~-~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT-AADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 80 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC-HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCC-HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 3467878889999999999877653 3333222 1111 11111 136678889999999999999
Q ss_pred hcCCCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHhC---CCCceEEEEEcccccc-cCCccchhhh
Q psy616 92 EKDKKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKS---KLYLRKLIISGISINK-KNEEDLYYCY 154 (1152)
Q Consensus 92 ~~~~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~-~~~~~~~~~~ 154 (1152)
++.+.+|.+||.-........ -++.+.+++.|++... ....+++.++..+... ......+...
T Consensus 81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as 160 (240)
T d2bd0a1 81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS 160 (240)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence 999999999997665322111 1346777777774321 1234555554432211 1222334444
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEec
Q psy616 155 FNSWVAFERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 155 ~~~~~g~~r~~~~e~p~~~~~~vd~~ 180 (1152)
-.++.+|.|+++.|+-...+++-.+.
T Consensus 161 K~al~~lt~~la~el~~~gIrvn~i~ 186 (240)
T d2bd0a1 161 KFGQRGLVETMRLYARKCNVRITDVQ 186 (240)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCeEEEEee
Confidence 56789999999999975444443333
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=93.88 E-value=0.19 Score=52.40 Aligned_cols=150 Identities=12% Similarity=0.078 Sum_probs=93.9
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccccc----CCC--ccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISP----NDT--VHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~----~~~--~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
+++..||.....|++.+++++|.++|. |+.+... ...... ... ..+..+-.++++.+++++.+.++.+.+|.
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi 82 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKS-AERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT 82 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence 567889999999999999999988876 4444432 221111 011 23666788999999999999999999999
Q ss_pred EEEeCCCCCc------ccc------------cChHHHHHHHHHHHhCC--CCceEEEEEccc-ccccCCccchhhhHHHH
Q psy616 100 VFYLWPLEDK------NCI------------YNIMPIIYFLQAVKKSK--LYLRKLIISGIS-INKKNEEDLYYCYFNSW 158 (1152)
Q Consensus 100 iv~lw~~~~~------~~~------------~~~~~l~~l~qal~~~~--~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~ 158 (1152)
+|+.-..... ... -++.+.++++|++...- -...+++++... .........+...-+++
T Consensus 83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~asKaal 162 (276)
T d1bdba_ 83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAI 162 (276)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHHHHHHHH
T ss_pred ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHHHHHHHH
Confidence 9987654111 000 12356677777643210 123444444322 21122233445555778
Q ss_pred HHHHHHHHHHcC-CCcEEEE
Q psy616 159 VAFERSLHIIMP-ETQISIV 177 (1152)
Q Consensus 159 ~g~~r~~~~e~p-~~~~~~v 177 (1152)
.+|.|+++.|+- ++++..|
T Consensus 163 ~~ltr~lA~ela~~IrVN~I 182 (276)
T d1bdba_ 163 VGLVRELAFELAPYVRVNGV 182 (276)
T ss_dssp HHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHhhcceEEccc
Confidence 999999999984 4555444
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=93.81 E-value=0.3 Score=50.33 Aligned_cols=153 Identities=10% Similarity=0.011 Sum_probs=95.0
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcc------ccccCCC--ccEEEcCCChhhHHHHHHHHHhcC-C
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNI------KISPNDT--VHYKINKDNINDYTFILNKIYEKD-K 95 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~------~~~~~~~--~~~~i~p~~~~d~~~l~~~l~~~~-~ 95 (1152)
.+++++||.....+++.+++++|.+.|. |+.+...+.. ....... ..|..+-.++++.+++++++.+.. +
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g 83 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 83 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 3578899999999999999999988776 5554443210 0111111 136778889999999999998886 6
Q ss_pred CcCEEEEeCCCCCccccc-------------ChHHHHHHHHHHHh---CCCCceEEEEEccccccc-CCccchhhhHHHH
Q psy616 96 KIDSVFYLWPLEDKNCIY-------------NIMPIIYFLQAVKK---SKLYLRKLIISGISINKK-NEEDLYYCYFNSW 158 (1152)
Q Consensus 96 ~~~~iv~lw~~~~~~~~~-------------~~~~l~~l~qal~~---~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~ 158 (1152)
.+|.+++.-......... ++.+.+++.|++.. .+...+++.++....... .....+...-+++
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al 163 (258)
T d1ae1a_ 84 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI 163 (258)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 788888765542221111 23566777776432 222445555554322221 2223344455778
Q ss_pred HHHHHHHHHHcCC--CcEEEEE
Q psy616 159 VAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 159 ~g~~r~~~~e~p~--~~~~~vd 178 (1152)
.+|+|+++.|+-. +++.+|.
T Consensus 164 ~~lt~~lA~el~~~gIrvN~I~ 185 (258)
T d1ae1a_ 164 NQMTKSLACEWAKDNIRVNSVA 185 (258)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHHHHhcCcCcEEEEEEe
Confidence 9999999999865 4555444
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.77 E-value=0.48 Score=48.58 Aligned_cols=153 Identities=10% Similarity=0.076 Sum_probs=96.2
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCcEEEEecCCcccc-------ccCC---Cc-cEEEcCCChhhHHHHHHHHHhcC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIKI-------SPND---TV-HYKINKDNINDYTFILNKIYEKD 94 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~~~~~~~~-------~~~~---~~-~~~i~p~~~~d~~~l~~~l~~~~ 94 (1152)
-+.+.+||.....|++.++++.|.++|.-+++...+.... .... .. .|..|-.++++..++++.+.++.
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~ 87 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 87 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 4678899999999999999999988876444433322211 1111 11 36678889999999999999999
Q ss_pred CCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHH----HhCCC-CceEEEEEcccc-cccCC--ccchhh
Q psy616 95 KKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAV----KKSKL-YLRKLIISGISI-NKKNE--EDLYYC 153 (1152)
Q Consensus 95 ~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal----~~~~~-~~~~~~v~~~~~-~~~~~--~~~~~~ 153 (1152)
+.+|.+||.-........ -++.+.+++.|++ ...+. ..+++.++..+. ...+. ...+..
T Consensus 88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~ 167 (257)
T d1xg5a_ 88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA 167 (257)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHH
Confidence 999999997654221111 1234556666653 33433 345555543221 11111 122333
Q ss_pred hHHHHHHHHHHHHHHc----CCCcEEEEE
Q psy616 154 YFNSWVAFERSLHIIM----PETQISIVF 178 (1152)
Q Consensus 154 ~~~~~~g~~r~~~~e~----p~~~~~~vd 178 (1152)
.-+++.+|.|+++.|+ .++++.+|.
T Consensus 168 sKaal~~ltr~la~el~~~~~~I~vn~i~ 196 (257)
T d1xg5a_ 168 TKYAVTALTEGLRQELREAQTHIRATCIS 196 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHhCHHHHHHHHHhCCCCEEEEEEe
Confidence 4467899999999997 357766665
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=93.76 E-value=0.23 Score=51.03 Aligned_cols=150 Identities=16% Similarity=0.232 Sum_probs=95.8
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc-------cccCC--CccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK-------ISPND--TVHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~-------~~~~~--~~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
..+..||.....|++.+++++|.+.|. |+.+... ... +.... -..|..+-.++++..++++++.++.+.
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~-~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 87 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT-QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 87 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS-HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 467788888999999999999988876 4444432 211 11111 124777888999999999999999999
Q ss_pred cCEEEEeCCCCCcccc-----c--------ChHHHHHHHHHHH----hCCCCceEEEEEcccccc-cCCccchhhhHHHH
Q psy616 97 IDSVFYLWPLEDKNCI-----Y--------NIMPIIYFLQAVK----KSKLYLRKLIISGISINK-KNEEDLYYCYFNSW 158 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~~-----~--------~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~ 158 (1152)
+|.+||.-........ + ++.+.+++.|++. +.+ ..+++.++...... ......+...-+++
T Consensus 88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaal 166 (251)
T d2c07a1 88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSKAGV 166 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCCCHHHHHHHHHH
Confidence 9999997654221111 1 2345667777633 222 34555555432211 12233444555778
Q ss_pred HHHHHHHHHHcCC--CcEEEEE
Q psy616 159 VAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 159 ~g~~r~~~~e~p~--~~~~~vd 178 (1152)
.+|.|+++.|+-. +++.+|.
T Consensus 167 ~~ltr~lA~el~~~gIrVN~V~ 188 (251)
T d2c07a1 167 IGFTKSLAKELASRNITVNAIA 188 (251)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHHHHHhhhhCeEEEEEc
Confidence 9999999999954 5555543
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=93.75 E-value=0.22 Score=51.30 Aligned_cols=154 Identities=11% Similarity=0.032 Sum_probs=96.3
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc--------cCCCc--cEEEcCCChhhHHHHHHHHHhcCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS--------PNDTV--HYKINKDNINDYTFILNKIYEKDK 95 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~--------~~~~~--~~~i~p~~~~d~~~l~~~l~~~~~ 95 (1152)
+++..||.....|++.+++++|.+.|. |+++...+..... ..... .+..|-.++++.+++++.+.++.+
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 456788888899999999999988776 5555443221110 11111 255677799999999999999999
Q ss_pred CcCEEEEeCCCCCccccc-------------ChHHHHHHHHHHHhC---CCCceEEEEEcccccc-cCCccchhhhHHHH
Q psy616 96 KIDSVFYLWPLEDKNCIY-------------NIMPIIYFLQAVKKS---KLYLRKLIISGISINK-KNEEDLYYCYFNSW 158 (1152)
Q Consensus 96 ~~~~iv~lw~~~~~~~~~-------------~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~ 158 (1152)
.+|.+||.-......... ++.+.+++.|++... ....+++.++...... ......+...-+++
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal 162 (260)
T d1x1ta1 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV 162 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhH
Confidence 999999987653221111 235667777763321 1134555555432222 12223344455678
Q ss_pred HHHHHHHHHHcCCCcEEEEEec
Q psy616 159 VAFERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 159 ~g~~r~~~~e~p~~~~~~vd~~ 180 (1152)
.+|.|+++.|+-...+++-.+.
T Consensus 163 ~~lt~~lA~el~~~gIrVN~I~ 184 (260)
T d1x1ta1 163 VGFTKVTALETAGQGITANAIC 184 (260)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEE
T ss_pred HHhHHHHHHHhchhCcEEEEEe
Confidence 9999999999965444443333
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=93.75 E-value=0.12 Score=50.28 Aligned_cols=80 Identities=11% Similarity=0.132 Sum_probs=58.3
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcch-HHHH---HHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLN-SIIY---KKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~-~~~~---~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
+++.++|.|+ ||.|++++..|.+.|...+.+..|+... ++.. +++.... ......+|+.+.+++...+
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~------ 88 (182)
T d1vi2a1 17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEAL------ 88 (182)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHH------
T ss_pred CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhh------
Confidence 5789999996 7999999999999999999999988543 3332 2333222 2346678999987765443
Q ss_pred cCCeeEEEEcccc
Q psy616 311 IGPIDGVLHIAGI 323 (1152)
Q Consensus 311 ~G~idgvIh~AG~ 323 (1152)
...|.|||+..+
T Consensus 89 -~~~diiIN~Tp~ 100 (182)
T d1vi2a1 89 -ASADILTNGTKV 100 (182)
T ss_dssp -HTCSEEEECSST
T ss_pred -cccceeccccCC
Confidence 257999999754
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.74 E-value=0.22 Score=50.88 Aligned_cols=152 Identities=8% Similarity=0.041 Sum_probs=95.7
Q ss_pred ccCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc--------cCCC-ccEEEcCCChhhHHHHHHHHHhcC
Q psy616 25 KVKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS--------PNDT-VHYKINKDNINDYTFILNKIYEKD 94 (1152)
Q Consensus 25 ~~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~--------~~~~-~~~~i~p~~~~d~~~l~~~l~~~~ 94 (1152)
+..++..||.....|++.+++++|.+.|. |+.+... ..... .... ..+..+-.++++...+++.+.++.
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~-~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN-KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 82 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 34678899999999999999999988876 4444433 21111 1111 236667779999999999999999
Q ss_pred CCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHH----HhCCCCceEEEEEccccccc-CCccchhhhHH
Q psy616 95 KKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAV----KKSKLYLRKLIISGISINKK-NEEDLYYCYFN 156 (1152)
Q Consensus 95 ~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal----~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~ 156 (1152)
+.+|.+||.-........ -++.+.++++|++ .+.+ ..+++.+++.+...+ .....+.+.-+
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKa 161 (244)
T d1yb1a_ 83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKF 161 (244)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCCCcHHHHHHHH
Confidence 999999997665221111 1345667777763 3333 444555544322211 11223344446
Q ss_pred HHHHHHHHHHHHcC-----CCcEEEEE
Q psy616 157 SWVAFERSLHIIMP-----ETQISIVF 178 (1152)
Q Consensus 157 ~~~g~~r~~~~e~p-----~~~~~~vd 178 (1152)
++.+|.++++.|+. ++++..|.
T Consensus 162 al~~~~~~La~El~~~~~~gI~V~~i~ 188 (244)
T d1yb1a_ 162 AAVGFHKTLTDELAALQITGVKTTCLC 188 (244)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEEEEE
Confidence 78899999999962 45555543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.65 E-value=0.35 Score=51.05 Aligned_cols=152 Identities=10% Similarity=0.056 Sum_probs=97.3
Q ss_pred ccCCceEEEEecCchhHHHHHHHHccCCcEEEEe-cCCcc-ccc-------------cCCCccEEEcCCChhhHHHHHHH
Q psy616 25 KVKKNNLLCFSSNKDFQNKIVESISSYTDIIFIE-QSDNI-KIS-------------PNDTVHYKINKDNINDYTFILNK 89 (1152)
Q Consensus 25 ~~~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~-~~~~~-~~~-------------~~~~~~~~i~p~~~~d~~~l~~~ 89 (1152)
.-.++..||.....|++.+++++|.++|.-|++. ..... ... ......+..+..+.++.+++++.
T Consensus 4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 83 (302)
T d1gz6a_ 4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT 83 (302)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence 3467889999999999999999999888644443 22100 000 01122467788899999999999
Q ss_pred HHhcCCCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHH----hCCCCceEEEEEcccccc-cCCccch
Q psy616 90 IYEKDKKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVK----KSKLYLRKLIISGISINK-KNEEDLY 151 (1152)
Q Consensus 90 l~~~~~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~-~~~~~~~ 151 (1152)
+.+..+.+|.+|+.-+....... -++.+.+++.|++. +.+ ..+++.++...... ......+
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~~~~~Y 162 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQANY 162 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHH
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCCCcHHH
Confidence 99999999999998665322111 12467777777733 222 34555555422111 1223344
Q ss_pred hhhHHHHHHHHHHHHHHcCCCcEEEE
Q psy616 152 YCYFNSWVAFERSLHIIMPETQISIV 177 (1152)
Q Consensus 152 ~~~~~~~~g~~r~~~~e~p~~~~~~v 177 (1152)
...-+++.+|.|+++.|+-...+++-
T Consensus 163 ~asKaal~~lt~~la~E~~~~gIrVN 188 (302)
T d1gz6a_ 163 SAAKLGLLGLANTLVIEGRKNNIHCN 188 (302)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcee
Confidence 44557789999999999875444443
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=93.65 E-value=0.38 Score=50.34 Aligned_cols=154 Identities=8% Similarity=-0.016 Sum_probs=93.1
Q ss_pred cccCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcc------ccc---cCCCccEEEcCCChhhHHHHHHHHHhc
Q psy616 24 SKVKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNI------KIS---PNDTVHYKINKDNINDYTFILNKIYEK 93 (1152)
Q Consensus 24 ~~~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~------~~~---~~~~~~~~i~p~~~~d~~~l~~~l~~~ 93 (1152)
...++++.||+....|++.+++++|.+.|. |+.+...... ... ......+..+..+.++...+++.+.+.
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 100 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 100 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence 456889999999999999999999988876 5555433210 010 111224667888999999999999999
Q ss_pred CCCcCEEEEeCCCCCccccc-------------ChHHHHHHHHHH----HhCCCCceEEEEEcccccc-cCCccchhhhH
Q psy616 94 DKKIDSVFYLWPLEDKNCIY-------------NIMPIIYFLQAV----KKSKLYLRKLIISGISINK-KNEEDLYYCYF 155 (1152)
Q Consensus 94 ~~~~~~iv~lw~~~~~~~~~-------------~~~~l~~l~qal----~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~ 155 (1152)
.+.+|.+||.-......... .+...+.+.+.. ...........++...... ......+...-
T Consensus 101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasK 180 (294)
T d1w6ua_ 101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK 180 (294)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHH
Confidence 99999999976543221111 112233333332 2222233333333221111 11222234445
Q ss_pred HHHHHHHHHHHHHcCC--CcEEEE
Q psy616 156 NSWVAFERSLHIIMPE--TQISIV 177 (1152)
Q Consensus 156 ~~~~g~~r~~~~e~p~--~~~~~v 177 (1152)
+++.+|+|+++.|+-. +++-.|
T Consensus 181 aal~~ltk~lA~ela~~gIrVN~I 204 (294)
T d1w6ua_ 181 AGVEAMSKSLAAEWGKYGMRFNVI 204 (294)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred HHHHHHHHHHHHHHhHhCeEEEEE
Confidence 7789999999999964 555544
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=93.63 E-value=0.096 Score=50.77 Aligned_cols=86 Identities=16% Similarity=0.088 Sum_probs=58.2
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
..++++.+++|.| .||||+..+..+...|+++|+.+.+++...+.. ++.|....+. ..-.+ +.+....... .
T Consensus 24 a~v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a---~~~Ga~~~i~-~~~~~-~~~~~~~~~~--~ 95 (174)
T d1e3ia2 24 AKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA---KALGATDCLN-PRELD-KPVQDVITEL--T 95 (174)
T ss_dssp SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH---HHTTCSEEEC-GGGCS-SCHHHHHHHH--H
T ss_pred hCCCCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHH---HHhCCCcccC-Cccch-hhhhhhHhhh--h
Confidence 4578899999996 599999999999999999999988876544443 4456654321 11111 2233333333 2
Q ss_pred cCCeeEEEEccccc
Q psy616 311 IGPIDGVLHIAGIS 324 (1152)
Q Consensus 311 ~G~idgvIh~AG~~ 324 (1152)
.+.+|.+|.++|..
T Consensus 96 ~~G~d~vie~~G~~ 109 (174)
T d1e3ia2 96 AGGVDYSLDCAGTA 109 (174)
T ss_dssp TSCBSEEEESSCCH
T ss_pred cCCCcEEEEecccc
Confidence 35799999999863
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=93.60 E-value=0.14 Score=49.56 Aligned_cols=86 Identities=13% Similarity=0.054 Sum_probs=57.6
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
..++++.+++|.|+ ||+|+..+..+...|+.+||.+.+++..-+..++ .|+...+-.-|-.+. .+... +.. .
T Consensus 25 ~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~---~GA~~~in~~~~~~~--~~~~~-~~~-~ 96 (176)
T d1d1ta2 25 GKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA---VGATECISPKDSTKP--ISEVL-SEM-T 96 (176)
T ss_dssp SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH---HTCSEEECGGGCSSC--HHHHH-HHH-H
T ss_pred hCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh---cCCcEEECccccchH--HHHHH-HHh-c
Confidence 34788999999975 9999999999999999999998888765444444 466544332232221 22222 221 2
Q ss_pred cCCeeEEEEccccc
Q psy616 311 IGPIDGVLHIAGIS 324 (1152)
Q Consensus 311 ~G~idgvIh~AG~~ 324 (1152)
.+.+|.+|.+.|..
T Consensus 97 g~G~d~vi~~~g~~ 110 (176)
T d1d1ta2 97 GNNVGYTFEVIGHL 110 (176)
T ss_dssp TSCCCEEEECSCCH
T ss_pred cccceEEEEeCCch
Confidence 24699999988753
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=93.35 E-value=0.25 Score=50.95 Aligned_cols=150 Identities=10% Similarity=0.086 Sum_probs=96.3
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccc-------ccCCC--ccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKI-------SPNDT--VHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~-------~~~~~--~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
.++.+||.....|++.+++++|.+.|. |+.+... .... ..... ..|..+-.++++.+++++.+.++.+.
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN-REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 82 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 577889999999999999999988876 4444432 2111 11111 24677788999999999999999899
Q ss_pred cCEEEEeCCCCCc-ccc-------------cChHHHHHHHHHHHhC---CCCceEEEEEccccc-ccCCccchhhhHHHH
Q psy616 97 IDSVFYLWPLEDK-NCI-------------YNIMPIIYFLQAVKKS---KLYLRKLIISGISIN-KKNEEDLYYCYFNSW 158 (1152)
Q Consensus 97 ~~~iv~lw~~~~~-~~~-------------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~ 158 (1152)
+|.+||.-..... ... -++.+.+++.|++... ....+++.++..... .......+...-+++
T Consensus 83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal 162 (260)
T d1zema1 83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI 162 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHH
T ss_pred CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHH
Confidence 9999997654211 111 1245677777774321 224455555542221 112233445555778
Q ss_pred HHHHHHHHHHcCC--CcEEEE
Q psy616 159 VAFERSLHIIMPE--TQISIV 177 (1152)
Q Consensus 159 ~g~~r~~~~e~p~--~~~~~v 177 (1152)
.+|.|+++.|+-. +++..|
T Consensus 163 ~~ltk~lA~el~~~gIrVN~I 183 (260)
T d1zema1 163 IALTETAALDLAPYNIRVNAI 183 (260)
T ss_dssp HHHHHHHHHHHGGGTEEEEEE
T ss_pred HHHHHHHHHHhhhhCCEEEEe
Confidence 9999999999964 444444
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=93.33 E-value=0.089 Score=51.01 Aligned_cols=84 Identities=17% Similarity=0.087 Sum_probs=57.5
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHH-HHHHHHHHHHh
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKL-KMISEINSIIN 309 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~-~v~~~~~~~~~ 309 (1152)
..++++.+++|.|+ ||+|+..++.+...|+++|+.+.+++...+.. ++.|....+ |.++.+ .+.+.....
T Consensus 23 a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a---~~lGa~~~i---~~~~~d~~~~~~~~~~-- 93 (174)
T d1p0fa2 23 AKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA---IELGATECL---NPKDYDKPIYEVICEK-- 93 (174)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH---HHTTCSEEE---CGGGCSSCHHHHHHHH--
T ss_pred hCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH---HHcCCcEEE---cCCCchhHHHHHHHHh--
Confidence 45789999999985 99999999999999999999988876544433 455765443 332222 122233222
Q ss_pred hcCCeeEEEEcccc
Q psy616 310 NIGPIDGVLHIAGI 323 (1152)
Q Consensus 310 ~~G~idgvIh~AG~ 323 (1152)
.-+.+|.+|-++|.
T Consensus 94 ~~~G~d~vid~~g~ 107 (174)
T d1p0fa2 94 TNGGVDYAVECAGR 107 (174)
T ss_dssp TTSCBSEEEECSCC
T ss_pred cCCCCcEEEEcCCC
Confidence 23479999998875
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=93.32 E-value=0.32 Score=49.87 Aligned_cols=152 Identities=7% Similarity=0.001 Sum_probs=94.9
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----cCCCc--cEEEcCCChhhHHHHHHHHHhcCCCcC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----PNDTV--HYKINKDNINDYTFILNKIYEKDKKID 98 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----~~~~~--~~~i~p~~~~d~~~l~~~l~~~~~~~~ 98 (1152)
.+++..||.....|++.+++++|.++|. |+..... ..... ..... .+..+-.++++.+++++.+.++.+.+|
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD 82 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN-EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC-HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 3567788888889999999999988876 4444332 21111 11112 245567799999999999999999999
Q ss_pred EEEEeCCCCCccccc-------------ChHHHHHHHHHHHhC--CCCceEEEEEccccccc-CCccchhhhHHHHHHHH
Q psy616 99 SVFYLWPLEDKNCIY-------------NIMPIIYFLQAVKKS--KLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFE 162 (1152)
Q Consensus 99 ~iv~lw~~~~~~~~~-------------~~~~l~~l~qal~~~--~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~ 162 (1152)
.+|+.-......... ++.+.+++.|++... ....+++.++....... .....+...-+++.+|.
T Consensus 83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt 162 (253)
T d1hxha_ 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALT 162 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHHHHHHH
Confidence 999987653222111 245667777764321 11344555544322221 22233444556789999
Q ss_pred HHHHHHcC----CCcEEEEE
Q psy616 163 RSLHIIMP----ETQISIVF 178 (1152)
Q Consensus 163 r~~~~e~p----~~~~~~vd 178 (1152)
|+++.|+- ++++-.|.
T Consensus 163 ~~lA~e~~~~g~~IrVN~I~ 182 (253)
T d1hxha_ 163 RAAALSCRKQGYAIRVNSIH 182 (253)
T ss_dssp HHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHhhcCCCEEEEEEe
Confidence 99999983 35655553
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=93.19 E-value=0.45 Score=48.85 Aligned_cols=153 Identities=12% Similarity=0.087 Sum_probs=94.9
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc------c-cc--CCCccEEEcCCChhhHHHHHHHHHhcCC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK------I-SP--NDTVHYKINKDNINDYTFILNKIYEKDK 95 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~------~-~~--~~~~~~~i~p~~~~d~~~l~~~l~~~~~ 95 (1152)
-++++.||.....|++.+++++|.+.|. |+.+....... . .. ..-..|..+-.++++.+++++++.++.+
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 86 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4678899999999999999999988876 55544432111 0 00 1112377788899999999999999999
Q ss_pred CcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHh----CCCCceEEEEEcccccccC--------Cccc
Q psy616 96 KIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKK----SKLYLRKLIISGISINKKN--------EEDL 150 (1152)
Q Consensus 96 ~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~----~~~~~~~~~v~~~~~~~~~--------~~~~ 150 (1152)
.+|.+||.-........ -++.+.+++.|++.. ......+.+.+........ ....
T Consensus 87 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~ 166 (260)
T d1h5qa_ 87 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF 166 (260)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHH
T ss_pred CCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccc
Confidence 99999997654322111 123566677666432 2323333333322111110 1122
Q ss_pred hhhhHHHHHHHHHHHHHHcCC--CcEEEEE
Q psy616 151 YYCYFNSWVAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 151 ~~~~~~~~~g~~r~~~~e~p~--~~~~~vd 178 (1152)
+...-+++.+|.|+++.|+-. +++..|.
T Consensus 167 Y~asKaal~~lt~~lA~el~~~gIrvN~I~ 196 (260)
T d1h5qa_ 167 YNSSKAACSNLVKGLAAEWASAGIRVNALS 196 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hhhhhhhHHHHHHHHHHHhchhCeEEeecC
Confidence 344456789999999999964 5554443
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=93.07 E-value=0.13 Score=49.30 Aligned_cols=78 Identities=13% Similarity=0.121 Sum_probs=52.6
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.+++|.|+ |++|+..++.+...|+.+|++..+.+ ..+. +++.|.... .|..+.+... ...
T Consensus 27 ~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~-~~~~---a~~lGad~~---i~~~~~~~~~-------~~~ 91 (168)
T d1uufa2 27 QAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEA-KREA---AKALGADEV---VNSRNADEMA-------AHL 91 (168)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGG-GHHH---HHHHTCSEE---EETTCHHHHH-------TTT
T ss_pred CCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchh-HHHH---HhccCCcEE---EECchhhHHH-------Hhc
Confidence 4678999999985 89999999888888887776554443 3333 344566533 3555554322 223
Q ss_pred CCeeEEEEccccc
Q psy616 312 GPIDGVLHIAGIS 324 (1152)
Q Consensus 312 G~idgvIh~AG~~ 324 (1152)
+.+|.+|.+.|..
T Consensus 92 ~~~D~vid~~g~~ 104 (168)
T d1uufa2 92 KSFDFILNTVAAP 104 (168)
T ss_dssp TCEEEEEECCSSC
T ss_pred CCCceeeeeeecc
Confidence 5799999999853
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.05 E-value=0.32 Score=50.09 Aligned_cols=152 Identities=11% Similarity=0.083 Sum_probs=92.4
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCcEEEEecCCccccc-------cCC--CccEEEcCCChhhHHHHHHHHHhc-CCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIKIS-------PND--TVHYKINKDNINDYTFILNKIYEK-DKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~~~~v~~~~~~~~~-------~~~--~~~~~i~p~~~~d~~~l~~~l~~~-~~~ 96 (1152)
++++.||.....|++.+++++|.+.|..+++......... ... -..+..+-.++++.+++++.+.+. ++.
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 86 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 86 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 5778899899999999999999888764433333221111 111 123667788999999999999877 477
Q ss_pred cCEEEEeCCCCCcccc-------------cChHHHHHHHHHHHh---CCCCceEEEEEcccccc-cCCccchhhhHHHHH
Q psy616 97 IDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVKK---SKLYLRKLIISGISINK-KNEEDLYYCYFNSWV 159 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~---~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~ 159 (1152)
+|.+|+.-........ -++.+.++++|++.. .....+++.++...... ......+...-+++.
T Consensus 87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~ 166 (259)
T d1xq1a_ 87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALN 166 (259)
T ss_dssp CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHH
T ss_pred cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccchh
Confidence 9999998665222111 124567777776432 11234555555432211 122334555557789
Q ss_pred HHHHHHHHHcCC--CcEEEEE
Q psy616 160 AFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 160 g~~r~~~~e~p~--~~~~~vd 178 (1152)
+|.|+++.|+-. +++..|-
T Consensus 167 ~lt~~lA~e~~~~gIrVN~V~ 187 (259)
T d1xq1a_ 167 QLARNLACEWASDGIRANAVA 187 (259)
T ss_dssp HHHHHHHHHHGGGTCEEEEEE
T ss_pred hhhHHHHHHhcccCeEEEEec
Confidence 999999999964 5655553
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.99 E-value=0.1 Score=53.72 Aligned_cols=152 Identities=9% Similarity=0.042 Sum_probs=96.5
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----cCC-CccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----PND-TVHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----~~~-~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
..++..||.....+++.++++.|.+.|. |+..... ..... ... -..+..+-.++++.+++++++.++.+.+|.
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-ESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 82 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 3577899999999999999999988876 4444332 11111 111 123677888999999999999999899999
Q ss_pred EEEeCCCCC-cc-----ccc--------ChHHHHHHHHHHHhC--CCCceEEEEEcccccc-cCCccchhhhHHHHHHHH
Q psy616 100 VFYLWPLED-KN-----CIY--------NIMPIIYFLQAVKKS--KLYLRKLIISGISINK-KNEEDLYYCYFNSWVAFE 162 (1152)
Q Consensus 100 iv~lw~~~~-~~-----~~~--------~~~~l~~l~qal~~~--~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~g~~ 162 (1152)
+||.-.... .. ..+ ++.+.++++|++... .-..+++.++...... ......+...-+++.+|.
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt 162 (250)
T d1ydea1 83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMT 162 (250)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHhhHHHHH
Confidence 999765321 11 111 245667777763321 0124555555432211 122233444556789999
Q ss_pred HHHHHHcC--CCcEEEEE
Q psy616 163 RSLHIIMP--ETQISIVF 178 (1152)
Q Consensus 163 r~~~~e~p--~~~~~~vd 178 (1152)
|+++.|+- ++++..|.
T Consensus 163 ~~lA~e~a~~gIrVN~I~ 180 (250)
T d1ydea1 163 KALALDESPYGVRVNCIS 180 (250)
T ss_dssp HHHHHHHGGGTCEEEEEE
T ss_pred HHHHHHhcccCeEEEEEe
Confidence 99999995 46666654
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.92 E-value=0.071 Score=51.90 Aligned_cols=81 Identities=21% Similarity=0.268 Sum_probs=49.3
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
..+++.++||+||+||+|....+.....|++++..+++.+. . +.+++.|....+ |-.+ ...+.+..+ .-
T Consensus 28 ~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k-~---~~~~~lGa~~vi---~~~~--~~~~~~~~~--~~ 96 (176)
T d1xa0a2 28 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE-H---DYLRVLGAKEVL---ARED--VMAERIRPL--DK 96 (176)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC-H---HHHHHTTCSEEE---ECC-----------C--CS
T ss_pred CCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHH-H---HHHHhcccceee---ecch--hHHHHHHHh--hc
Confidence 34568899999999999998888777778866665554443 2 334456776443 2221 112222221 23
Q ss_pred CCeeEEEEcccc
Q psy616 312 GPIDGVLHIAGI 323 (1152)
Q Consensus 312 G~idgvIh~AG~ 323 (1152)
+.+|.||.+.|-
T Consensus 97 ~gvD~vid~vgg 108 (176)
T d1xa0a2 97 QRWAAAVDPVGG 108 (176)
T ss_dssp CCEEEEEECSTT
T ss_pred cCcCEEEEcCCc
Confidence 479999999874
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=92.79 E-value=0.48 Score=48.87 Aligned_cols=153 Identities=11% Similarity=0.115 Sum_probs=95.8
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcc------ccccCCCc-cEEEcCCChhhHHHHHHHHHhcCCCc
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNI------KISPNDTV-HYKINKDNINDYTFILNKIYEKDKKI 97 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~------~~~~~~~~-~~~i~p~~~~d~~~l~~~l~~~~~~~ 97 (1152)
.+++..||.....|++.+++++|.+.|. |+.+...... ........ .+..+-.++++.+++++.+.++.+.+
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 83 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 4678899999999999999999988775 5555432110 11111111 25667889999999999999999999
Q ss_pred CEEEEeCCCCCcc-------ccc--------ChHHHHHHHHHHHhC---CCCceEEEEEccccccc--CCccchhhhHHH
Q psy616 98 DSVFYLWPLEDKN-------CIY--------NIMPIIYFLQAVKKS---KLYLRKLIISGISINKK--NEEDLYYCYFNS 157 (1152)
Q Consensus 98 ~~iv~lw~~~~~~-------~~~--------~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~ 157 (1152)
|.+|+.-...... ..+ ++.+.+++.|+.... ....+++.++....... +....+...-++
T Consensus 84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaa 163 (268)
T d2bgka1 84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHA 163 (268)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHH
T ss_pred ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHH
Confidence 9999976542111 111 245667777774322 22344555543222211 111223444577
Q ss_pred HHHHHHHHHHHcCC--CcEEEEE
Q psy616 158 WVAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 158 ~~g~~r~~~~e~p~--~~~~~vd 178 (1152)
+.+|.|+++.|+-. +++..|.
T Consensus 164 l~~lt~~lA~el~~~gIrVN~I~ 186 (268)
T d2bgka1 164 VLGLTTSLCTELGEYGIRVNCVS 186 (268)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEE
T ss_pred HHhCHHHHHHHhChhCeEEEecC
Confidence 89999999999964 5555553
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=92.74 E-value=0.15 Score=50.28 Aligned_cols=85 Identities=13% Similarity=0.129 Sum_probs=57.6
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhh
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINN 310 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 310 (1152)
..++++.+++|.|+ |++|+..+..+...|+.+|+.+.+++. ..+..++.|.... .|-.+ +++.+.+.++. .
T Consensus 21 a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~---rl~~a~~~Ga~~~---~~~~~-~~~~~~i~~~t-~ 91 (195)
T d1kola2 21 AGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPA---RLAHAKAQGFEIA---DLSLD-TPLHEQIAALL-G 91 (195)
T ss_dssp TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH---HHHHHHHTTCEEE---ETTSS-SCHHHHHHHHH-S
T ss_pred hCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccch---hhHhhhhccccEE---EeCCC-cCHHHHHHHHh-C
Confidence 35788999999975 899999998888889999998887653 3344456676542 23233 23333333332 2
Q ss_pred cCCeeEEEEccccc
Q psy616 311 IGPIDGVLHIAGIS 324 (1152)
Q Consensus 311 ~G~idgvIh~AG~~ 324 (1152)
-..+|.+|.+.|..
T Consensus 92 g~g~D~vid~vG~~ 105 (195)
T d1kola2 92 EPEVDCAVDAVGFE 105 (195)
T ss_dssp SSCEEEEEECCCTT
T ss_pred CCCcEEEEECcccc
Confidence 24699999999853
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=92.69 E-value=0.12 Score=49.75 Aligned_cols=84 Identities=17% Similarity=0.160 Sum_probs=56.8
Q ss_pred ccccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHH-HHHHHHHHHh
Q psy616 231 SYIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLK-MISEINSIIN 309 (1152)
Q Consensus 231 ~~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~-v~~~~~~~~~ 309 (1152)
..++++.+++|.|+ ||+|...+..++..|+.+|+.+.+++...+ ..++.|+.-.+ |..+.+. +++......
T Consensus 24 a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~---~a~~~GAd~~i---n~~~~~~~~~~~~~~~~- 95 (175)
T d1cdoa2 24 AKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE---KAKVFGATDFV---NPNDHSEPISQVLSKMT- 95 (175)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH---HHHHTTCCEEE---CGGGCSSCHHHHHHHHH-
T ss_pred hCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHH---HHHHcCCcEEE---cCCCcchhHHHHHHhhc-
Confidence 35789999999985 789999999999999999999888865433 34456765433 3332222 223333222
Q ss_pred hcCCeeEEEEcccc
Q psy616 310 NIGPIDGVLHIAGI 323 (1152)
Q Consensus 310 ~~G~idgvIh~AG~ 323 (1152)
-+.+|.+|-+.|.
T Consensus 96 -~~G~d~vid~~G~ 108 (175)
T d1cdoa2 96 -NGGVDFSLECVGN 108 (175)
T ss_dssp -TSCBSEEEECSCC
T ss_pred -cCCcceeeeecCC
Confidence 2479999999985
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=92.49 E-value=0.07 Score=50.98 Aligned_cols=71 Identities=14% Similarity=0.311 Sum_probs=49.7
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK-LNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~-~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
.++.++|.|+ |++|..++++|..+|...+.+..|+. ..+++.++ .+.++ . ++ +++.+ ....
T Consensus 23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~---~~~~~--~--~~---~~~~~-------~l~~ 84 (159)
T d1gpja2 23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD---LGGEA--V--RF---DELVD-------HLAR 84 (159)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH---HTCEE--C--CG---GGHHH-------HHHT
T ss_pred ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHh---hhccc--c--cc---hhHHH-------Hhcc
Confidence 5788999997 99999999999999999999999984 33333333 34332 1 22 22222 2236
Q ss_pred eeEEEEcccc
Q psy616 314 IDGVLHIAGI 323 (1152)
Q Consensus 314 idgvIh~AG~ 323 (1152)
.|+||.+.+.
T Consensus 85 ~Divi~atss 94 (159)
T d1gpja2 85 SDVVVSATAA 94 (159)
T ss_dssp CSEEEECCSS
T ss_pred CCEEEEecCC
Confidence 8999999875
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=92.38 E-value=0.44 Score=48.74 Aligned_cols=152 Identities=5% Similarity=0.026 Sum_probs=94.4
Q ss_pred CCceEEEEecCc--hhHHHHHHHHccCCc-EEEEecCCccc-----cc--cCCCccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNK--DFQNKIVESISSYTD-IIFIEQSDNIK-----IS--PNDTVHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~--~~~~~l~~~l~~~~~-~~~v~~~~~~~-----~~--~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
++++.||....+ |++.+++++|.++|. |++....+... .. ......|..+-.++++.+++++.+.+..+.
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence 566777776443 899999999988876 44443332110 00 112234778888999999999999999999
Q ss_pred cCEEEEeCCCCCc---------ccc--------cChHHHHHHHHHHHhCCC-CceEEEEEcccc-cccCCccchhhhHHH
Q psy616 97 IDSVFYLWPLEDK---------NCI--------YNIMPIIYFLQAVKKSKL-YLRKLIISGISI-NKKNEEDLYYCYFNS 157 (1152)
Q Consensus 97 ~~~iv~lw~~~~~---------~~~--------~~~~~l~~l~qal~~~~~-~~~~~~v~~~~~-~~~~~~~~~~~~~~~ 157 (1152)
+|.+||....... ... -++.+.++++|++...-. ..+++.++.... ........+...-++
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 166 (256)
T d1ulua_ 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAA 166 (256)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHHHH
Confidence 9999997765221 001 123567777777543221 233444443222 112223334455577
Q ss_pred HHHHHHHHHHHcC--CCcEEEEE
Q psy616 158 WVAFERSLHIIMP--ETQISIVF 178 (1152)
Q Consensus 158 ~~g~~r~~~~e~p--~~~~~~vd 178 (1152)
+.+|.|+++.|+- ++++-.|-
T Consensus 167 l~~ltr~lA~ela~~gIrVN~I~ 189 (256)
T d1ulua_ 167 LEASVRYLAYELGPKGVRVNAIS 189 (256)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEE
T ss_pred HHHHHHHHHHHhcccCCEEeeec
Confidence 8999999999995 46666653
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=92.33 E-value=0.18 Score=52.05 Aligned_cols=151 Identities=11% Similarity=0.059 Sum_probs=96.5
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCcccc-------c--cCCCc--cEEEcCCChhhHHHHHHHHHhcC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKI-------S--PNDTV--HYKINKDNINDYTFILNKIYEKD 94 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~-------~--~~~~~--~~~i~p~~~~d~~~l~~~l~~~~ 94 (1152)
+++..||.....|++.+++++|.++|. |+.+... .... . ..... .+..+-.++++.+++++++.++.
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS-SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 467889999999999999999988876 4444432 1111 0 01111 25567789999999999999999
Q ss_pred CCcCEEEEeCCCCC-cccc-----c--------ChHHHHHHHHHHHh---CCCCceEEEEEcccc-cccCCccchhhhHH
Q psy616 95 KKIDSVFYLWPLED-KNCI-----Y--------NIMPIIYFLQAVKK---SKLYLRKLIISGISI-NKKNEEDLYYCYFN 156 (1152)
Q Consensus 95 ~~~~~iv~lw~~~~-~~~~-----~--------~~~~l~~l~qal~~---~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~ 156 (1152)
+.+|.+|+.-.... .... + ++.+.+++.|++.. .....+++.++.... ........+...-+
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa 161 (258)
T d1iy8a_ 82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH 161 (258)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHH
Confidence 99999999765421 1111 1 24567777776422 222445555554322 11222334445557
Q ss_pred HHHHHHHHHHHHcC--CCcEEEEE
Q psy616 157 SWVAFERSLHIIMP--ETQISIVF 178 (1152)
Q Consensus 157 ~~~g~~r~~~~e~p--~~~~~~vd 178 (1152)
++.+|.|+++.|+- ++++..|.
T Consensus 162 al~~lt~~lA~el~~~gIrVN~i~ 185 (258)
T d1iy8a_ 162 GVVGLTRNSAVEYGRYGIRINAIA 185 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred HHHHHHHHHHHHhCccCceEEEEe
Confidence 78999999999986 46665554
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.11 E-value=0.37 Score=45.93 Aligned_cols=80 Identities=14% Similarity=-0.005 Sum_probs=51.0
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.+++|.|+ |++|+..++.+...|++ ++.+.+++...+ ..++.|....+..-+-.+ +. ....
T Consensus 24 ~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~-vi~~~~~~~k~~---~a~~lGa~~~i~~~~~~~------~~---~~~~ 89 (168)
T d1piwa2 24 GCGPGKKVGIVGL-GGIGSMGTLISKAMGAE-TYVISRSSRKRE---DAMKMGADHYIATLEEGD------WG---EKYF 89 (168)
T ss_dssp TCSTTCEEEEECC-SHHHHHHHHHHHHHTCE-EEEEESSSTTHH---HHHHHTCSEEEEGGGTSC------HH---HHSC
T ss_pred CcCCCCEEEEECC-CCcchhHHHHhhhcccc-ccccccchhHHH---HhhccCCcEEeeccchHH------HH---Hhhh
Confidence 4678999999986 89999988887778885 555555544333 344557654332222221 11 1233
Q ss_pred CCeeEEEEcccccC
Q psy616 312 GPIDGVLHIAGISG 325 (1152)
Q Consensus 312 G~idgvIh~AG~~~ 325 (1152)
+.+|.+|.+.|...
T Consensus 90 ~~~d~vi~~~~~~~ 103 (168)
T d1piwa2 90 DTFDLIVVCASSLT 103 (168)
T ss_dssp SCEEEEEECCSCST
T ss_pred cccceEEEEecCCc
Confidence 57999999887644
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=92.00 E-value=0.63 Score=46.87 Aligned_cols=145 Identities=11% Similarity=0.125 Sum_probs=82.6
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWP 105 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~ 105 (1152)
+.++.||.....|++.+++++|.+.|. |+.+... ...........+..+- .++ ++.+.++-+.+|.+||.-.
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~-~~~l~~~~~~~~~~Dv--~~~----~~~~~~~~g~iD~lVnnAG 75 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN-EELLKRSGHRYVVCDL--RKD----LDLLFEKVKEVDILVLNAG 75 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHTCSEEEECCT--TTC----HHHHHHHSCCCSEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-HHHHHhcCCcEEEcch--HHH----HHHHHHHhCCCcEEEeccc
Confidence 467889999999999999999988876 4444433 3333333322233222 223 3444555578999999765
Q ss_pred CCCcccc-------------cChHHHHHHHHHHHhC---CCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHHHH
Q psy616 106 LEDKNCI-------------YNIMPIIYFLQAVKKS---KLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLHII 168 (1152)
Q Consensus 106 ~~~~~~~-------------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~~e 168 (1152)
....... -++.+.+++.|++... ....+++.++....... .....+...-+++.+|.|+++.|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~e 155 (234)
T d1o5ia_ 76 GPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFE 155 (234)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHH
Confidence 4221111 1245677777774321 22344555544322221 12222333346788999999999
Q ss_pred cCC--CcEEEEE
Q psy616 169 MPE--TQISIVF 178 (1152)
Q Consensus 169 ~p~--~~~~~vd 178 (1152)
+-. +++-+|.
T Consensus 156 la~~gIrVN~I~ 167 (234)
T d1o5ia_ 156 VAPYGITVNCVA 167 (234)
T ss_dssp HGGGTEEEEEEE
T ss_pred hcccCeEEeecc
Confidence 964 5555553
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=91.97 E-value=0.33 Score=49.82 Aligned_cols=155 Identities=14% Similarity=0.095 Sum_probs=93.5
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc--cc----cCCC-c--cEEEcCC-ChhhHHHHHHHHHhcCC
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK--IS----PNDT-V--HYKINKD-NINDYTFILNKIYEKDK 95 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~--~~----~~~~-~--~~~i~p~-~~~d~~~l~~~l~~~~~ 95 (1152)
+++++||.....|++.+++++|.+.|. ++++....... .. .... . .+..+-. +.++.+++++.+.++.+
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g 83 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence 567889988999999999999988775 66664332111 10 0111 1 1344443 45678999999999999
Q ss_pred CcCEEEEeCCCCCccccc-----ChHHHHHHHHHHHh----CC--CCceEEEEEcccc-cccCCccchhhhHHHHHHHHH
Q psy616 96 KIDSVFYLWPLEDKNCIY-----NIMPIIYFLQAVKK----SK--LYLRKLIISGISI-NKKNEEDLYYCYFNSWVAFER 163 (1152)
Q Consensus 96 ~~~~iv~lw~~~~~~~~~-----~~~~l~~l~qal~~----~~--~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~g~~r 163 (1152)
.+|.+|+..+..+....+ ++.+.+++.+++.. .+ ...+++.+++... ........+.+.-+++.+|.|
T Consensus 84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~ 163 (254)
T d1sbya1 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTN 163 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHHHH
Confidence 999999977653322222 34566677776432 21 1233444443222 112223344555577899999
Q ss_pred HHHHHcCCCcEEEEEecC
Q psy616 164 SLHIIMPETQISIVFAEK 181 (1152)
Q Consensus 164 ~~~~e~p~~~~~~vd~~~ 181 (1152)
+++.|+....+++.-+.|
T Consensus 164 ~la~el~~~gIrVn~I~P 181 (254)
T d1sbya1 164 SLAKLAPITGVTAYSINP 181 (254)
T ss_dssp HHHHHHHHHSEEEEEEEE
T ss_pred HHHhhccccCeEEEEEEe
Confidence 999998654444444443
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=91.96 E-value=0.39 Score=48.96 Aligned_cols=149 Identities=11% Similarity=0.064 Sum_probs=93.7
Q ss_pred eEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------cCCC--ccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 30 NLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------PNDT--VHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 30 ~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~~~~--~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
.+||.....|++.+++++|.+.|. |++....+..... .... ..|..|-.++++.+++++.+.++.+.+|.
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV 82 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 356767788999999999988876 4433222211110 0111 13777888999999999999999999999
Q ss_pred EEEeCCCCCcccc-------------cChHHHHHHHHHHHhC---CCCceEEEEEcccc-cccCCccchhhhHHHHHHHH
Q psy616 100 VFYLWPLEDKNCI-------------YNIMPIIYFLQAVKKS---KLYLRKLIISGISI-NKKNEEDLYYCYFNSWVAFE 162 (1152)
Q Consensus 100 iv~lw~~~~~~~~-------------~~~~~l~~l~qal~~~---~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~g~~ 162 (1152)
+||.-........ -++.+.+++.|++... ....+++.++.... ........+...-+++.+|.
T Consensus 83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~lt 162 (244)
T d1edoa_ 83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFS 162 (244)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHCh
Confidence 9997654322111 1346777777774321 22455555554322 11123344555567799999
Q ss_pred HHHHHHcCC--CcEEEEE
Q psy616 163 RSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 163 r~~~~e~p~--~~~~~vd 178 (1152)
|+++.|+-. +++.+|.
T Consensus 163 k~lA~el~~~gIrvN~I~ 180 (244)
T d1edoa_ 163 KTAAREGASRNINVNVVC 180 (244)
T ss_dssp HHHHHHHHTTTEEEEEEE
T ss_pred HHHHHHHhhhCcEEEEEe
Confidence 999999954 5555543
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.90 E-value=0.73 Score=46.68 Aligned_cols=146 Identities=9% Similarity=0.052 Sum_probs=87.2
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----c-CCCccEEEcCCChhhHHHHHHHHHhcCCCcCEE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----P-NDTVHYKINKDNINDYTFILNKIYEKDKKIDSV 100 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----~-~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~i 100 (1152)
.+++.||.....|++.+++++|.+.|. |+.+... ..... . ..-..+.++-.++++.+++++ +-+.+|.+
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDil 78 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT-NSDLVSLAKECPGIEPVCVDLGDWDATEKALG----GIGPVDLL 78 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCSEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHH----HcCCCeEE
Confidence 567889999999999999999988776 5444432 11111 1 112246667777777666554 44779999
Q ss_pred EEeCCCCCcccc-------------cChHHHHHHHHHHHh----CCCCceEEEEEccccccc-CCccchhhhHHHHHHHH
Q psy616 101 FYLWPLEDKNCI-------------YNIMPIIYFLQAVKK----SKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFE 162 (1152)
Q Consensus 101 v~lw~~~~~~~~-------------~~~~~l~~l~qal~~----~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~ 162 (1152)
||.-........ -++.+.+++.|++.. .+...+++.++....... .....+...-+++.+|.
T Consensus 79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt 158 (242)
T d1cyda_ 79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLT 158 (242)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHH
Confidence 998655322111 124567777776432 233345555544322221 12233444456789999
Q ss_pred HHHHHHcCC--CcEEEE
Q psy616 163 RSLHIIMPE--TQISIV 177 (1152)
Q Consensus 163 r~~~~e~p~--~~~~~v 177 (1152)
|+++.|+-. +++..|
T Consensus 159 ~~lA~e~~~~gIrvN~I 175 (242)
T d1cyda_ 159 KAMAMELGPHKIRVNSV 175 (242)
T ss_dssp HHHHHHHGGGTEEEEEE
T ss_pred HHHHHHhCccCeecccC
Confidence 999999975 454444
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.87 E-value=0.67 Score=47.04 Aligned_cols=147 Identities=8% Similarity=0.085 Sum_probs=88.2
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----c-CCCccEEEcCCChhhHHHHHHHHHhcCCCcCE
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----P-NDTVHYKINKDNINDYTFILNKIYEKDKKIDS 99 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----~-~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~ 99 (1152)
..+++.||.....|++.+++++|.++|. |+.+... ..... . ..-..+.++-.++++.++++++ -+.+|.
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~-~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~----~g~iDi 79 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT-QADLDSLVRECPGIEPVCVDLGDWEATERALGS----VGPVDL 79 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT----CCCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHH----hCCceE
Confidence 3678899999999999999999988775 5554432 11111 1 1122466777787777666644 467999
Q ss_pred EEEeCCCCCcccc-----c--------ChHHHHHHHHHHHh----CCCCceEEEEEcccccc-cCCccchhhhHHHHHHH
Q psy616 100 VFYLWPLEDKNCI-----Y--------NIMPIIYFLQAVKK----SKLYLRKLIISGISINK-KNEEDLYYCYFNSWVAF 161 (1152)
Q Consensus 100 iv~lw~~~~~~~~-----~--------~~~~l~~l~qal~~----~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~g~ 161 (1152)
+||.-........ + ++.+.+++.|++.. .+...+++.++...... ......+...-+++.+|
T Consensus 80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~l 159 (244)
T d1pr9a_ 80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDML 159 (244)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHH
Confidence 9997654222111 1 23566677776432 22234555554432221 12223344445678999
Q ss_pred HHHHHHHcCC--CcEEEE
Q psy616 162 ERSLHIIMPE--TQISIV 177 (1152)
Q Consensus 162 ~r~~~~e~p~--~~~~~v 177 (1152)
+|+++.|+-. +++..|
T Consensus 160 t~~lA~el~~~gIrvN~I 177 (244)
T d1pr9a_ 160 TKVMALELGPHKIRVNAV 177 (244)
T ss_dssp HHHHHHHHGGGTEEEEEE
T ss_pred HHHHHHHhCCCcEEEEEE
Confidence 9999999954 555554
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=91.04 E-value=0.45 Score=49.22 Aligned_cols=152 Identities=13% Similarity=0.066 Sum_probs=94.9
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc-------cccC--C-C--ccEEEcCCChhhHHHHHHHHHh
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK-------ISPN--D-T--VHYKINKDNINDYTFILNKIYE 92 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~-------~~~~--~-~--~~~~i~p~~~~d~~~l~~~l~~ 92 (1152)
.++++.||.....|++.+++++|.+.|. |+++... ... ..+. . . ..+..+-.++++.+++++.+.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS-SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3567888888999999999999988876 5554432 111 1111 1 1 1366778899999999999999
Q ss_pred cCCCcCEEEEeCCCCCc---------ccc--------cChHHHHHHHHHHHhCC--CCceEEEEEcc-cccc-cCCccch
Q psy616 93 KDKKIDSVFYLWPLEDK---------NCI--------YNIMPIIYFLQAVKKSK--LYLRKLIISGI-SINK-KNEEDLY 151 (1152)
Q Consensus 93 ~~~~~~~iv~lw~~~~~---------~~~--------~~~~~l~~l~qal~~~~--~~~~~~~v~~~-~~~~-~~~~~~~ 151 (1152)
+.+.+|.+||.-..... ... -++.+.+++.|++...- -....+++++. +... ......+
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y 161 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY 161 (272)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence 99999999997543211 000 12456777777743211 12344444432 1111 1122334
Q ss_pred hhhHHHHHHHHHHHHHHcCC--CcEEEEE
Q psy616 152 YCYFNSWVAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 152 ~~~~~~~~g~~r~~~~e~p~--~~~~~vd 178 (1152)
...-+++.+|.|+++.|+-. +++..|.
T Consensus 162 ~asKaal~~ltk~lA~el~~~gIrVN~I~ 190 (272)
T d1xkqa_ 162 AIAKAALDQYTRSTAIDLAKFGIRVNSVS 190 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhHHHHHHHHHHHHHHHhcccCeEEEEEe
Confidence 44556789999999999854 6666554
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.91 E-value=0.85 Score=46.51 Aligned_cols=151 Identities=9% Similarity=0.091 Sum_probs=90.7
Q ss_pred CceEEEEecCchhHHHHHHHHccCCc-EEEEecCCc------cccccC-CC---ccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 28 KNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDN------IKISPN-DT---VHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 28 ~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~------~~~~~~-~~---~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
++.+||.....|++.++++.|.+.|. |+.+..... ...... .. ..+..+-.++++.+++++.+.+..+.
T Consensus 3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 82 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 56788888899999999999988776 554443311 001111 11 12667888999999999999999899
Q ss_pred cCEEEEeCCCCCccccc-----ChHHHHHHHHH----HHhCCC--CceEEEEEccccccc-CCccchhhhHHHHHHHHHH
Q psy616 97 IDSVFYLWPLEDKNCIY-----NIMPIIYFLQA----VKKSKL--YLRKLIISGISINKK-NEEDLYYCYFNSWVAFERS 164 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~~~-----~~~~l~~l~qa----l~~~~~--~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~ 164 (1152)
+|.+|+.-........+ ++.+.+++.+. +.+.+. ..+++.++......+ .....+...-+++.+|.|+
T Consensus 83 iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs 162 (254)
T d2gdza1 83 LDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS 162 (254)
T ss_dssp CCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred cCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHHH
Confidence 99999977654322221 23444555444 323221 234445543322111 1223334444678899998
Q ss_pred --HHHHcCC--CcEEEEE
Q psy616 165 --LHIIMPE--TQISIVF 178 (1152)
Q Consensus 165 --~~~e~p~--~~~~~vd 178 (1152)
++.|+-. +++.+|.
T Consensus 163 ~ala~e~~~~gIrVN~I~ 180 (254)
T d2gdza1 163 AALAANLMNSGVRLNAIC 180 (254)
T ss_dssp HHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHhcCCCEEEEEEE
Confidence 5667644 5555554
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=90.79 E-value=0.16 Score=52.95 Aligned_cols=151 Identities=13% Similarity=0.055 Sum_probs=93.3
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccc-------cccCC---C--ccEEEcCCChhhHHHHHHHHHhc
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIK-------ISPND---T--VHYKINKDNINDYTFILNKIYEK 93 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~-------~~~~~---~--~~~~i~p~~~~d~~~l~~~l~~~ 93 (1152)
++++.||.....|++.+++++|.++|. |+.+... ... +.... . ..+..+-.++++.+++++.+.++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN-EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 467888988999999999999988876 4444332 111 11111 1 13667788999999999999999
Q ss_pred CCCcCEEEEeCCCC--Cc-----cccc--------ChHHHHHHHHHHHhC---CCCceEEEEEccc-ccccCCccchhhh
Q psy616 94 DKKIDSVFYLWPLE--DK-----NCIY--------NIMPIIYFLQAVKKS---KLYLRKLIISGIS-INKKNEEDLYYCY 154 (1152)
Q Consensus 94 ~~~~~~iv~lw~~~--~~-----~~~~--------~~~~l~~l~qal~~~---~~~~~~~~v~~~~-~~~~~~~~~~~~~ 154 (1152)
.+.+|.+|+.-... .. ...+ ++.+.+++.|++... +....+.+++..+ .........+...
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~as 161 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA 161 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhh
Confidence 99999999975431 11 0111 235667777774321 2123333332221 1111222334444
Q ss_pred HHHHHHHHHHHHHHcC--CCcEEEEE
Q psy616 155 FNSWVAFERSLHIIMP--ETQISIVF 178 (1152)
Q Consensus 155 ~~~~~g~~r~~~~e~p--~~~~~~vd 178 (1152)
-+++.+|.|+++.|+- ++++..|.
T Consensus 162 Kaal~~ltk~lA~ela~~gIrVN~I~ 187 (274)
T d1xhla_ 162 KAALDQYTRCTAIDLIQHGVRVNSVS 187 (274)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred hhHHHHHHHHHHHHHhHhCCceeeec
Confidence 5778999999999985 46666654
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.70 E-value=1.2 Score=45.50 Aligned_cols=151 Identities=9% Similarity=0.010 Sum_probs=89.1
Q ss_pred CCceEEEEecCchhHHHHHHHHcc---CCc-EEEEecCCccccc--------c-CCC--ccEEEcCCChhhHHHHHHHHH
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISS---YTD-IIFIEQSDNIKIS--------P-NDT--VHYKINKDNINDYTFILNKIY 91 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~---~~~-~~~v~~~~~~~~~--------~-~~~--~~~~i~p~~~~d~~~l~~~l~ 91 (1152)
.++..||.....|++.+++++|.+ .|. |+.+... ..... . .+. ..+..+-.++++.+++++.+.
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~ 83 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS-ESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC-HHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECC-HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 456677777889999999999854 444 5554432 21111 0 111 136667889999999999987
Q ss_pred hc----CCCcCEEEEeCCCCC--------cccc--------cChHHHHHHHHHHHhCCC-----CceEEEEEcccccc-c
Q psy616 92 EK----DKKIDSVFYLWPLED--------KNCI--------YNIMPIIYFLQAVKKSKL-----YLRKLIISGISINK-K 145 (1152)
Q Consensus 92 ~~----~~~~~~iv~lw~~~~--------~~~~--------~~~~~l~~l~qal~~~~~-----~~~~~~v~~~~~~~-~ 145 (1152)
+. +..++.+|+-..... .... -++.+.+++.|++...-. ...++.++..+... .
T Consensus 84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~ 163 (259)
T d1oaaa_ 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY 163 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCC
Confidence 63 345666666433210 0010 134678888888654322 12344444322211 1
Q ss_pred CCccchhhhHHHHHHHHHHHHHHcCCCcEEEEE
Q psy616 146 NEEDLYYCYFNSWVAFERSLHIIMPETQISIVF 178 (1152)
Q Consensus 146 ~~~~~~~~~~~~~~g~~r~~~~e~p~~~~~~vd 178 (1152)
.....+...-+++.+|.|+++.|.+++++..|.
T Consensus 164 ~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~ 196 (259)
T d1oaaa_ 164 KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYA 196 (259)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 223334444567899999999998887776664
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.62 E-value=0.79 Score=46.52 Aligned_cols=147 Identities=7% Similarity=0.111 Sum_probs=85.5
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCc--cccccCCCc-cEEEcCCChhhHHHHHHHHHhcCCCcCEEEE
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDN--IKISPNDTV-HYKINKDNINDYTFILNKIYEKDKKIDSVFY 102 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~--~~~~~~~~~-~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~ 102 (1152)
.+++.||.....+++.++++.|.++|. |+.+...+. .+..+.... .+..+.... ..++.+......+|.+||
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~~~id~lVn 80 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK----KQIDQFANEVERLDVLFN 80 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH----HHHHHHHHHCSCCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccc----ccccccccccccceeEEe
Confidence 567889999999999999999988775 666554321 111111111 233333333 344555556678999999
Q ss_pred eCCCCCcccc-------------cChHHHHHHHHHHHh---CCCCceEEEEEccccccc--CCccchhhhHHHHHHHHHH
Q psy616 103 LWPLEDKNCI-------------YNIMPIIYFLQAVKK---SKLYLRKLIISGISINKK--NEEDLYYCYFNSWVAFERS 164 (1152)
Q Consensus 103 lw~~~~~~~~-------------~~~~~l~~l~qal~~---~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~g~~r~ 164 (1152)
.-+....... -++.+.++++|++.. .....+++.++....... .....+...-+++.+|+|+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~ 160 (245)
T d2ag5a1 81 VAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKS 160 (245)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHH
T ss_pred cccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHH
Confidence 8664222111 124577777777542 122445666654322221 1222344445678999999
Q ss_pred HHHHcCC--CcEEEE
Q psy616 165 LHIIMPE--TQISIV 177 (1152)
Q Consensus 165 ~~~e~p~--~~~~~v 177 (1152)
++.|+.. +++-+|
T Consensus 161 lA~e~~~~gIrvN~I 175 (245)
T d2ag5a1 161 VAADFIQQGIRCNCV 175 (245)
T ss_dssp HHHHHGGGTEEEEEE
T ss_pred HHHHhhhhCcEEEEE
Confidence 9999975 454444
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.53 E-value=0.4 Score=44.87 Aligned_cols=100 Identities=12% Similarity=0.169 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhcccCCCCCceeeeccCCCCCccccchhhHHHHHH
Q psy616 904 ISQTELIKSVYKKSNLNPEDINYIITHGTGTKLGDPVEINALHDVFKNKTYNQKFCAITSNKSNIGHTFAASGLVSLINL 983 (1152)
Q Consensus 904 ~~q~~~i~~al~~Agi~p~dI~yve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~igsvKsniGH~~~AaG~~~lik~ 983 (1152)
....++|+++|+++|++++||+|+-.|-.+ ..=++++.+.++-.. .+ ... .+=...||+-+|+=...|..
T Consensus 48 ~~v~~~i~~~L~~~gl~~~dId~~i~Hqa~-----~~i~~~v~~~lgl~~--ek-~~~-~~~~~~GNt~sasip~~L~~- 117 (148)
T d1u6ea2 48 FKMGDVGRRAMDAAGVRPDQIDVFVPHQAN-----SRINELLVKNLQLRP--DA-VVA-NDIEHTGNTSAASIPLAMAE- 117 (148)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECCSC-----HHHHHHHHHHHTCCT--TC-EEC-CTHHHHCBCGGGHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCCcccccEEEecccc-----HHHHHHHHHhcCCCc--hh-hhh-hhHHhhCCCccchHHHHHHH-
Confidence 334578999999999999999999999554 344667777776322 12 122 22335689888875555443
Q ss_pred HHhhhcCCcCCCCCCCCCCcccccCCCCeeeccccccccccCCCccEEEEcCcCCCcceEEEEEc
Q psy616 984 VQSIKYKIIPASLHCEKENNYIILKNSPFYINKSNKKWNTVNEKLRIGAVSAFGMSGTNAHIVLQ 1048 (1152)
Q Consensus 984 ~l~l~~~~ipp~~~~~~~np~i~~~~~~~~v~~~~~~w~~~~~~~r~a~v~sfG~gG~nah~il~ 1048 (1152)
+++.+.+.| -.+.++.+||.|=+-+++||+
T Consensus 118 --a~~~g~i~~---------------------------------Gd~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 118 --LLTTGAAKP---------------------------------GDLALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp --HHHHTSSCT---------------------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred --HHHcCCCCC---------------------------------CCEEEEEEEchhhhheEEEEe
Confidence 444443322 124567789988777787774
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.37 E-value=0.86 Score=45.86 Aligned_cols=149 Identities=11% Similarity=0.022 Sum_probs=83.5
Q ss_pred CceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcCCChhhHHHHHHHHHhc--CCCcCEEEEeC
Q psy616 28 KNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINKDNINDYTFILNKIYEK--DKKIDSVFYLW 104 (1152)
Q Consensus 28 ~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p~~~~d~~~l~~~l~~~--~~~~~~iv~lw 104 (1152)
++++||....+|++.+++++|.+.|. |+.+...+... ......+.++..+.++.+.+.+.+.+. ...+|.+||.-
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnA 79 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE--ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVA 79 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT--SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--ccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECC
Confidence 57889999999999999999988875 55554332111 011111223334455666666666543 34589999975
Q ss_pred CCC---C---ccccc--------ChHHHHHHHHHHHhC-CCCceEEEEEcccccc-cCCccchhhhHHHHHHHHHHHHHH
Q psy616 105 PLE---D---KNCIY--------NIMPIIYFLQAVKKS-KLYLRKLIISGISINK-KNEEDLYYCYFNSWVAFERSLHII 168 (1152)
Q Consensus 105 ~~~---~---~~~~~--------~~~~l~~l~qal~~~-~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~g~~r~~~~e 168 (1152)
... . ....+ ++.+.+.+.|++... +...+++.++..+... ......+...-+++.+|.|+++.|
T Consensus 80 G~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~E 159 (236)
T d1dhra_ 80 GGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGK 159 (236)
T ss_dssp CCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTST
T ss_pred cccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHHHHH
Confidence 421 1 11111 234566666664432 1123444444332222 122333445557789999999999
Q ss_pred cC----CCcEEEEE
Q psy616 169 MP----ETQISIVF 178 (1152)
Q Consensus 169 ~p----~~~~~~vd 178 (1152)
+. ++++..|.
T Consensus 160 l~~~~~gI~vn~v~ 173 (236)
T d1dhra_ 160 NSGMPSGAAAIAVL 173 (236)
T ss_dssp TSSCCTTCEEEEEE
T ss_pred hccCCCcEEEEEEE
Confidence 85 45555543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=89.99 E-value=0.85 Score=45.80 Aligned_cols=149 Identities=9% Similarity=-0.005 Sum_probs=79.3
Q ss_pred CceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccccCCCccEEEcC---CChhhHHHHHHHHHh--cCCCcCEEE
Q psy616 28 KNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKISPNDTVHYKINK---DNINDYTFILNKIYE--KDKKIDSVF 101 (1152)
Q Consensus 28 ~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~i~p---~~~~d~~~l~~~l~~--~~~~~~~iv 101 (1152)
.+++||.....|++.+++++|.+.|. |+.+...... ..+ ...+-+ ...++-....+.+.. +.+.+|.+|
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li 76 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND----QAD-SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 76 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT----TSS-EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchh----ccc-ccceeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence 46789999999999999999998875 5554433111 111 112222 222333333333333 467799999
Q ss_pred EeCCCC---Cc---ccc--------cChHHHHHHHHHHHhCCC-CceEEEEEccccccc-CCccchhhhHHHHHHHHHHH
Q psy616 102 YLWPLE---DK---NCI--------YNIMPIIYFLQAVKKSKL-YLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSL 165 (1152)
Q Consensus 102 ~lw~~~---~~---~~~--------~~~~~l~~l~qal~~~~~-~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~ 165 (1152)
|.-... .. ... -++.+.+.+.|.....-. ..+++.++....... .....+...-+++.+|.|++
T Consensus 77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~l 156 (235)
T d1ooea_ 77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSL 156 (235)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHH
Confidence 975431 11 000 123456666666443221 233444433221111 12233444446688999999
Q ss_pred HHHcC--CCcEEEEEecC
Q psy616 166 HIIMP--ETQISIVFAEK 181 (1152)
Q Consensus 166 ~~e~p--~~~~~~vd~~~ 181 (1152)
+.|+. +..+++..+.|
T Consensus 157 a~e~~~~~~~i~v~~i~P 174 (235)
T d1ooea_ 157 AAKDSGLPDNSAVLTIMP 174 (235)
T ss_dssp HSTTSSCCTTCEEEEEEE
T ss_pred HHHhccCCCceEEEEEec
Confidence 99985 34445544443
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=89.88 E-value=0.62 Score=47.88 Aligned_cols=151 Identities=10% Similarity=-0.001 Sum_probs=93.4
Q ss_pred CCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc-------c--CC---CccEEEcCCChhhHHHHHHHHHhc
Q psy616 27 KKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS-------P--ND---TVHYKINKDNINDYTFILNKIYEK 93 (1152)
Q Consensus 27 ~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~-------~--~~---~~~~~i~p~~~~d~~~l~~~l~~~ 93 (1152)
+.+..||.....|++.+++++|.++|. |+.+... ..... . .. -..|..+-.++++.+++++.+.++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH-AERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 82 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 567788888899999999999988776 4444332 11110 0 01 123667888999999999999999
Q ss_pred CCCcCEEEEeCCCCC------c---cccc--------ChHHHHHHHHHHHhCC--CCceEEEEEcccccc--cCCccchh
Q psy616 94 DKKIDSVFYLWPLED------K---NCIY--------NIMPIIYFLQAVKKSK--LYLRKLIISGISINK--KNEEDLYY 152 (1152)
Q Consensus 94 ~~~~~~iv~lw~~~~------~---~~~~--------~~~~l~~l~qal~~~~--~~~~~~~v~~~~~~~--~~~~~~~~ 152 (1152)
.+.+|.+||.-.... . ...+ ++.+.+++.|++...- .....+++++..... ......+.
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y~ 162 (264)
T d1spxa_ 83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYS 162 (264)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHHH
T ss_pred hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhhh
Confidence 999999999754311 0 0111 2456777777743211 123444444432212 11223344
Q ss_pred hhHHHHHHHHHHHHHHcC--CCcEEEEE
Q psy616 153 CYFNSWVAFERSLHIIMP--ETQISIVF 178 (1152)
Q Consensus 153 ~~~~~~~g~~r~~~~e~p--~~~~~~vd 178 (1152)
..-+++.+|.|+++.|+- ++++..|.
T Consensus 163 asKaal~~lt~~lA~el~~~gIrVN~V~ 190 (264)
T d1spxa_ 163 IAKAAIDQYTRNTAIDLIQHGIRVNSIS 190 (264)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred hhhhhHHHHHHHHHHHhcccCeEEEEEe
Confidence 445678999999999985 46666554
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=89.33 E-value=0.21 Score=47.96 Aligned_cols=77 Identities=17% Similarity=0.255 Sum_probs=47.9
Q ss_pred ccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHh-h-
Q psy616 233 IKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIIN-N- 310 (1152)
Q Consensus 233 ~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~-~- 310 (1152)
.++++++||+||+||+|...++.....|++++..+++.+. . +.+++.|....+. .++ ...+... .
T Consensus 21 ~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k-~---~~~~~lGad~vi~------~~~---~~~~~~~~~~ 87 (167)
T d1tt7a2 21 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA-A---DYLKQLGASEVIS------RED---VYDGTLKALS 87 (167)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST-H---HHHHHHTCSEEEE------HHH---HCSSCCCSSC
T ss_pred CCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHH-H---HHHHhhcccceEe------ccc---hhchhhhccc
Confidence 3456789999999999999988777778866665554443 2 3345557664322 111 1111111 1
Q ss_pred cCCeeEEEEccc
Q psy616 311 IGPIDGVLHIAG 322 (1152)
Q Consensus 311 ~G~idgvIh~AG 322 (1152)
-+.+|.||.+.|
T Consensus 88 ~~gvd~vid~vg 99 (167)
T d1tt7a2 88 KQQWQGAVDPVG 99 (167)
T ss_dssp CCCEEEEEESCC
T ss_pred CCCceEEEecCc
Confidence 247999999876
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=89.11 E-value=0.51 Score=44.76 Aligned_cols=64 Identities=22% Similarity=0.193 Sum_probs=45.4
Q ss_pred CCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHH
Q psy616 236 GGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEI 304 (1152)
Q Consensus 236 ~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~ 304 (1152)
.|.++|.|+ |.+|..+|++|+++|. .|++..|+.. ..+++.+..........+..+.......+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~-~V~v~dr~~~---~a~~l~~~~~~~~~~~~~~~~~~~~~~~i 65 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGI-KVTVACRTLE---SAKKLSAGVQHSTPISLDVNDDAALDAEV 65 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTC-EEEEEESCHH---HHHHHHTTCTTEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECChH---HHHHHHhcccccccccccccchhhhHhhh
Confidence 578889876 9999999999999988 5777777753 33445444455566666777766655444
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.76 E-value=0.87 Score=42.93 Aligned_cols=79 Identities=19% Similarity=0.159 Sum_probs=48.9
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNI 311 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 311 (1152)
.++++.+++|.|+ |++|+..++.+...|+ +|+.+.+++. ..+..++.|.... .|.++.+..+.+. +..
T Consensus 24 ~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~-~Vi~~~~~~~---~~~~a~~~Ga~~~---i~~~~~~~~~~~~----~~~ 91 (166)
T d1llua2 24 NARPGQWVAISGI-GGLGHVAVQYARAMGL-HVAAIDIDDA---KLELARKLGASLT---VNARQEDPVEAIQ----RDI 91 (166)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHH---HHHHHHHTTCSEE---EETTTSCHHHHHH----HHH
T ss_pred CCCCCCEEEEeec-cccHHHHHHHHHHcCC-ccceecchhh---HHHhhhccCcccc---ccccchhHHHHHH----Hhh
Confidence 4678999999875 9999998887777775 6777666643 2344556676543 2445444433332 223
Q ss_pred CCeeEEEEccc
Q psy616 312 GPIDGVLHIAG 322 (1152)
Q Consensus 312 G~idgvIh~AG 322 (1152)
+..+.+|-+++
T Consensus 92 ~g~~~~i~~~~ 102 (166)
T d1llua2 92 GGAHGVLVTAV 102 (166)
T ss_dssp SSEEEEEECCS
T ss_pred cCCcccccccc
Confidence 34555555554
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=88.19 E-value=1.5 Score=44.75 Aligned_cols=152 Identities=11% Similarity=0.115 Sum_probs=89.2
Q ss_pred CCceEEEEec--CchhHHHHHHHHccCCc-EEEEecCCcc--ccc-----cCCCccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSS--NKDFQNKIVESISSYTD-IIFIEQSDNI--KIS-----PNDTVHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d--~~~~~~~l~~~l~~~~~-~~~v~~~~~~--~~~-----~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
++++.||+.. ..|++.+++++|.++|. |+.+...+.. ... ......+..+-.+.++..++++++.+..+.
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~ 83 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 83 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence 4566777763 34899999999988876 5555543211 010 111234677888999999999999999999
Q ss_pred cCEEEEeCCCCCcccc------cC-----------hHHHHHHHHHHHhCCCCceEEEEEcc-ccccc-CCccchhhhHHH
Q psy616 97 IDSVFYLWPLEDKNCI------YN-----------IMPIIYFLQAVKKSKLYLRKLIISGI-SINKK-NEEDLYYCYFNS 157 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~~------~~-----------~~~l~~l~qal~~~~~~~~~~~v~~~-~~~~~-~~~~~~~~~~~~ 157 (1152)
+|.+||.-........ .. +++++.+.+.+..........+++.. +.... .....+.....+
T Consensus 84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK~a 163 (274)
T d2pd4a1 84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAA 163 (274)
T ss_dssp EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHHHH
Confidence 9999998765322111 11 12334444444333323333333322 21111 111223334466
Q ss_pred HHHHHHHHHHHcCC--CcEEEEE
Q psy616 158 WVAFERSLHIIMPE--TQISIVF 178 (1152)
Q Consensus 158 ~~g~~r~~~~e~p~--~~~~~vd 178 (1152)
+.+++|+++.|+-. +++.+|.
T Consensus 164 l~~ltr~lA~e~~~~GIrvN~I~ 186 (274)
T d2pd4a1 164 LESAVRYLAVDLGKHHIRVNALS 186 (274)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHhhHHHhcCcCceecccc
Confidence 88999999999854 5665554
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=88.14 E-value=0.34 Score=44.17 Aligned_cols=72 Identities=13% Similarity=0.142 Sum_probs=48.5
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
|.|+|.|. |-+|+.+|+.|.++|...+++..+ ++..++++..+.. ++..|.++++.+.++ .....|.
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d----~~~~~~~~~~~~~--~~~gd~~~~~~l~~a------~i~~a~~ 67 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN----EEKVNAYASYATH--AVIANATEENELLSL------GIRNFEY 67 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESC----HHHHHHTTTTCSE--EEECCTTCTTHHHHH------TGGGCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCc----HHHHHHHHHhCCc--ceeeecccchhhhcc------CCccccE
Confidence 45888865 899999999999999877666443 3445566666654 455899998766543 1124566
Q ss_pred EEEcc
Q psy616 317 VLHIA 321 (1152)
Q Consensus 317 vIh~A 321 (1152)
||-+.
T Consensus 68 vi~~~ 72 (134)
T d2hmva1 68 VIVAI 72 (134)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 66443
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=88.10 E-value=0.12 Score=53.19 Aligned_cols=148 Identities=7% Similarity=-0.067 Sum_probs=91.2
Q ss_pred eEEEEecCchhHHHHHHHHccCCcEEEEecCCcccc---ccCCCccEEEcCCChhhHHHHHHHHHhcCCCcCEEEEeCCC
Q psy616 30 NLLCFSSNKDFQNKIVESISSYTDIIFIEQSDNIKI---SPNDTVHYKINKDNINDYTFILNKIYEKDKKIDSVFYLWPL 106 (1152)
Q Consensus 30 ~~lvf~d~~~~~~~l~~~l~~~~~~~~v~~~~~~~~---~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~~iv~lw~~ 106 (1152)
+.||.....+++.+++++|.++|.-|++..-..... .......+.++..+.++.+++++++.++.+.+|.+||.-..
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 467888889999999999988876444432211111 00011123456668888999999999999999999986543
Q ss_pred CC-ccc-----cc--------ChHHHHHHHHHHH----hCCCCceEEEEEccccccc-CCccchhhhHHHHHHHHHHHHH
Q psy616 107 ED-KNC-----IY--------NIMPIIYFLQAVK----KSKLYLRKLIISGISINKK-NEEDLYYCYFNSWVAFERSLHI 167 (1152)
Q Consensus 107 ~~-~~~-----~~--------~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g~~r~~~~ 167 (1152)
.. ... .+ ++.+.+++.|++. +.+ ..+++.++....... .....+...-+++.+|.|+++.
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ 160 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSK 160 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccccccccccccccccHHHHHHHHHH
Confidence 11 111 11 2356677777643 222 345666654322221 2223345555778999999999
Q ss_pred HcC--CCcEEEEE
Q psy616 168 IMP--ETQISIVF 178 (1152)
Q Consensus 168 e~p--~~~~~~vd 178 (1152)
|+- ++++..|.
T Consensus 161 ela~~gIrVN~I~ 173 (252)
T d1zmta1 161 ELGEYNIPVFAIG 173 (252)
T ss_dssp HHGGGTCCEEEEE
T ss_pred HhcccCcEEEEEe
Confidence 986 46666654
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=87.92 E-value=0.66 Score=46.47 Aligned_cols=69 Identities=17% Similarity=0.229 Sum_probs=48.7
Q ss_pred CCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeEEEEccc
Q psy616 243 GGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDGVLHIAG 322 (1152)
Q Consensus 243 Gg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idgvIh~AG 322 (1152)
-.+|-.|.++|+.+..+|+.+.++.|..... ....+.. ..+...+++...+.+.. ...|.+|++|.
T Consensus 29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~---------~p~~~~~--~~~~t~~~m~~~~~~~~---~~~D~~i~aAA 94 (223)
T d1u7za_ 29 HSSGKMGFAIAAAAARRGANVTLVSGPVSLP---------TPPFVKR--VDVMTALEMEAAVNASV---QQQNIFIGCAA 94 (223)
T ss_dssp CCCSHHHHHHHHHHHHTTCEEEEEECSCCCC---------CCTTEEE--EECCSHHHHHHHHHHHG---GGCSEEEECCB
T ss_pred CCcHHHHHHHHHHHHHcCCchhhhhcccccC---------ccccccc--ceehhhHHHHHHHHhhh---ccceeEeeeec
Confidence 4578899999999999999888887765321 1112333 35567777776665544 45799999999
Q ss_pred ccC
Q psy616 323 ISG 325 (1152)
Q Consensus 323 ~~~ 325 (1152)
+..
T Consensus 95 vsD 97 (223)
T d1u7za_ 95 VAD 97 (223)
T ss_dssp CCS
T ss_pred hhh
Confidence 876
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=87.44 E-value=4.2 Score=40.79 Aligned_cols=150 Identities=10% Similarity=0.009 Sum_probs=89.5
Q ss_pred CCceEEEEecCc--hhHHHHHHHHccCCc-EEEEecCCcccc-------ccCCCccEEEcCCChhhHHHHHHHHHhcCCC
Q psy616 27 KKNNLLCFSSNK--DFQNKIVESISSYTD-IIFIEQSDNIKI-------SPNDTVHYKINKDNINDYTFILNKIYEKDKK 96 (1152)
Q Consensus 27 ~~~~~lvf~d~~--~~~~~l~~~l~~~~~-~~~v~~~~~~~~-------~~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~ 96 (1152)
.++++||....+ |++.++++.|.++|. |+.+...+...- .......+..+-.+..+....++.+......
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 83 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence 456677765544 799999999987775 555544321110 0112234666777889999999999999999
Q ss_pred cCEEEEeCCCCCccc----------cc--------ChHHHHHHHHHHHhCCCCc-eEEEEEccc-ccccCCccchhhhHH
Q psy616 97 IDSVFYLWPLEDKNC----------IY--------NIMPIIYFLQAVKKSKLYL-RKLIISGIS-INKKNEEDLYYCYFN 156 (1152)
Q Consensus 97 ~~~iv~lw~~~~~~~----------~~--------~~~~l~~l~qal~~~~~~~-~~~~v~~~~-~~~~~~~~~~~~~~~ 156 (1152)
+|.+||.-....... .+ .+...+.+.+++.....+. .++.++... .........+...-+
T Consensus 84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sKa 163 (258)
T d1qsga_ 84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA 163 (258)
T ss_dssp EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHHH
Confidence 999999765421111 01 1245555666654332222 233444322 222222334555557
Q ss_pred HHHHHHHHHHHHcCCCcEEE
Q psy616 157 SWVAFERSLHIIMPETQISI 176 (1152)
Q Consensus 157 ~~~g~~r~~~~e~p~~~~~~ 176 (1152)
++.+|+|+++.|+-.-.+++
T Consensus 164 al~~ltr~lA~el~~~gIrV 183 (258)
T d1qsga_ 164 SLEANVRYMANAMGPEGVRV 183 (258)
T ss_dssp HHHHHHHHHHHHHTTTTEEE
T ss_pred HHHHHHHHHHHHhCccCcee
Confidence 79999999999997544444
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=86.94 E-value=0.81 Score=42.60 Aligned_cols=75 Identities=15% Similarity=0.085 Sum_probs=50.3
Q ss_pred CEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCCeeE
Q psy616 237 GTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGPIDG 316 (1152)
Q Consensus 237 ~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~idg 316 (1152)
..++|.|. |.+|..+++.|.++|...+++....+......+.+...| +.++..|.+|++-++++ .....+.
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~--~~vi~Gd~~d~~~L~~a------~i~~a~~ 74 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDN--ADVIPGDSNDSSVLKKA------GIDRCRA 74 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTT--CEEEESCTTSHHHHHHH------TTTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCC--cEEEEccCcchHHHHHh------ccccCCE
Confidence 35777776 799999999999999877776554443334444444444 67789999998765433 1235666
Q ss_pred EEEc
Q psy616 317 VLHI 320 (1152)
Q Consensus 317 vIh~ 320 (1152)
||-+
T Consensus 75 vi~~ 78 (153)
T d1id1a_ 75 ILAL 78 (153)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6644
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=86.81 E-value=0.31 Score=47.16 Aligned_cols=49 Identities=22% Similarity=0.281 Sum_probs=33.9
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcE
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKA 287 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v 287 (1152)
+++++||+||+||+|....+.....|++++.+++ ++...+. +++.|...
T Consensus 31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~-~~~k~~~---~~~lGad~ 79 (177)
T d1o89a2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG-RESTHEY---LKSLGASR 79 (177)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CGGGHHH---HHHHTEEE
T ss_pred CCCcEEEEEccccchHHHHHHHHHcCCCeEEEec-chhHHHH---HHhhcccc
Confidence 4568999999999999888877777886665555 4433333 34456543
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=86.81 E-value=3.2 Score=41.68 Aligned_cols=154 Identities=10% Similarity=0.023 Sum_probs=87.0
Q ss_pred CceEEEEecCchhHHHHHHHHccCCc--EEEEecCCcccc---ccCCC---ccEEEcCCChhhHHHHHHHHHhcC--CCc
Q psy616 28 KNNLLCFSSNKDFQNKIVESISSYTD--IIFIEQSDNIKI---SPNDT---VHYKINKDNINDYTFILNKIYEKD--KKI 97 (1152)
Q Consensus 28 ~~~~lvf~d~~~~~~~l~~~l~~~~~--~~~v~~~~~~~~---~~~~~---~~~~i~p~~~~d~~~l~~~l~~~~--~~~ 97 (1152)
++++||.....|++.+++++|.++|. .++....+.... ..... ..+.++-.+.++.+.+++.+.+.. ..+
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 47889999999999999999988764 233222221111 11111 136677889999999999997753 358
Q ss_pred CEEEEeCCCCCc-c-----ccc--------ChHHHHHHHHHHHh----C---C-------CCceEEEEEcccccccCC--
Q psy616 98 DSVFYLWPLEDK-N-----CIY--------NIMPIIYFLQAVKK----S---K-------LYLRKLIISGISINKKNE-- 147 (1152)
Q Consensus 98 ~~iv~lw~~~~~-~-----~~~--------~~~~l~~l~qal~~----~---~-------~~~~~~~v~~~~~~~~~~-- 147 (1152)
|.+|+.-+.... . ..+ ++.+.+++.|++.. . . .......+..........
T Consensus 83 dilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~ 162 (250)
T d1yo6a1 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS 162 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS
T ss_pred EEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcc
Confidence 999998764211 1 011 23566666666421 1 1 112222232221111110
Q ss_pred ------ccchhhhHHHHHHHHHHHHHHcCCCcEEEEEecC
Q psy616 148 ------EDLYYCYFNSWVAFERSLHIIMPETQISIVFAEK 181 (1152)
Q Consensus 148 ------~~~~~~~~~~~~g~~r~~~~e~p~~~~~~vd~~~ 181 (1152)
...+...-+++.+|.|+++.|+....+++..+.|
T Consensus 163 ~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~P 202 (250)
T d1yo6a1 163 GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCP 202 (250)
T ss_dssp TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEC
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEec
Confidence 1113444466899999999998754444444333
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=86.25 E-value=3 Score=41.87 Aligned_cols=152 Identities=15% Similarity=0.114 Sum_probs=87.2
Q ss_pred ceEEEEecCchhHHHHHHHHc---cCCc-EEEEecCCccccc-------cCCC-ccEEEcCCChhhHHHHHHHHHh--cC
Q psy616 29 NNLLCFSSNKDFQNKIVESIS---SYTD-IIFIEQSDNIKIS-------PNDT-VHYKINKDNINDYTFILNKIYE--KD 94 (1152)
Q Consensus 29 ~~~lvf~d~~~~~~~l~~~l~---~~~~-~~~v~~~~~~~~~-------~~~~-~~~~i~p~~~~d~~~l~~~l~~--~~ 94 (1152)
+++||.....|++.+++++|- +.+. |+.+... ..... .... ..+.++-.++++.+++++.+.+ ..
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN-REQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC-TTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECC-HHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 478998999999999999873 3454 4444332 21111 1111 1377788899999999999854 56
Q ss_pred CCcCEEEEeCCCCCc---c---ccc--------ChHHHHHHHHHHHhC--------------CCCceEEEEEcccccccC
Q psy616 95 KKIDSVFYLWPLEDK---N---CIY--------NIMPIIYFLQAVKKS--------------KLYLRKLIISGISINKKN 146 (1152)
Q Consensus 95 ~~~~~iv~lw~~~~~---~---~~~--------~~~~l~~l~qal~~~--------------~~~~~~~~v~~~~~~~~~ 146 (1152)
..+|.+|+.-..... . ..+ ++.+.++++|++... ....+.+.++.......+
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~ 161 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 161 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence 779999997654111 0 011 235566666663211 012333444332211111
Q ss_pred -Ccc---chhhhHHHHHHHHHHHHHHcCCCcEEEEEecC
Q psy616 147 -EED---LYYCYFNSWVAFERSLHIIMPETQISIVFAEK 181 (1152)
Q Consensus 147 -~~~---~~~~~~~~~~g~~r~~~~e~p~~~~~~vd~~~ 181 (1152)
..+ .+...-+++.+|.|+++.|+....+++..+.|
T Consensus 162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~P 200 (248)
T d1snya_ 162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHP 200 (248)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 111 23344467899999999999765555544444
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=85.28 E-value=1.5 Score=41.77 Aligned_cols=73 Identities=15% Similarity=0.205 Sum_probs=48.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++.++|.|+ ||-+++++..|.+. ..+|.+..|+.. .+.+.+.+...+ .+..+..|-. ....
T Consensus 17 ~~k~vlIlGa-GGaarai~~aL~~~-~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~~~~ 79 (171)
T d1p77a1 17 PNQHVLILGA-GGATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------PLQT 79 (171)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------CCSC
T ss_pred CCCEEEEECC-cHHHHHHHHHHccc-CceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------cccc
Confidence 5778888875 78899999999874 578888888853 344444554333 4555544421 2357
Q ss_pred eeEEEEccccc
Q psy616 314 IDGVLHIAGIS 324 (1152)
Q Consensus 314 idgvIh~AG~~ 324 (1152)
.|.|||+..+.
T Consensus 80 ~diiIN~tp~g 90 (171)
T d1p77a1 80 YDLVINATSAG 90 (171)
T ss_dssp CSEEEECCCC-
T ss_pred cceeeeccccc
Confidence 89999997654
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=85.25 E-value=0.48 Score=43.11 Aligned_cols=60 Identities=22% Similarity=0.204 Sum_probs=40.9
Q ss_pred EEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHhCCCcEEEEEecCCCHHHHHHH
Q psy616 238 TYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKLNSIIYKKLKKFNNKAIYIQVDVSDKLKMISE 303 (1152)
Q Consensus 238 ~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~ 303 (1152)
.++|.|+ |-+|+.+++.|.++|..++++.... +..+.++... .+.++..|.+|++-++++
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~----~~~~~~~~~~-~~~vi~Gd~~~~~~l~~~ 61 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK----DICKKASAEI-DALVINGDCTKIKTLEDA 61 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHC-SSEEEESCTTSHHHHHHT
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCCh----hhhhhhhhhh-hhhhccCcccchhhhhhc
Confidence 3677776 9999999999999988655554332 3334444331 245788999998766543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.03 E-value=4.2 Score=41.29 Aligned_cols=151 Identities=7% Similarity=0.036 Sum_probs=91.9
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc----------cCCCccEEEcCCChhhHHHHHHHHHhcC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS----------PNDTVHYKINKDNINDYTFILNKIYEKD 94 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~----------~~~~~~~~i~p~~~~d~~~l~~~l~~~~ 94 (1152)
.+++++||.....|++.+++++|.+.|. |+.+... ..... ......+..+..+.+....+++......
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~-~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS-KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 4678899999999999999999988876 5544433 11111 1111235666778888899999988888
Q ss_pred CCcCEEEEeCCCCCcc-----cc--------cChHHHHHHHHHHHhC--CCCceEEEEEcccccc-cCCccchhhhHHHH
Q psy616 95 KKIDSVFYLWPLEDKN-----CI--------YNIMPIIYFLQAVKKS--KLYLRKLIISGISINK-KNEEDLYYCYFNSW 158 (1152)
Q Consensus 95 ~~~~~iv~lw~~~~~~-----~~--------~~~~~l~~l~qal~~~--~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~ 158 (1152)
+.++.+++.-...... .. -++.+.+.+.+++... ....+++.++..+... ......+...-+++
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal 170 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFAL 170 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHH
Confidence 8889888765432211 11 1235666666664211 0124455555432222 12233445555778
Q ss_pred HHHHHHHHHHcC----CCcEEEE
Q psy616 159 VAFERSLHIIMP----ETQISIV 177 (1152)
Q Consensus 159 ~g~~r~~~~e~p----~~~~~~v 177 (1152)
.+|.|+++.|+. ++++..|
T Consensus 171 ~~~~~~La~El~~~~~~I~V~~v 193 (269)
T d1xu9a_ 171 DGFFSSIRKEYSVSRVNVSITLC 193 (269)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEE
T ss_pred HHHHHHHHHHhhhcCCCEEEEEE
Confidence 999999999973 3554444
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.29 E-value=2.5 Score=42.39 Aligned_cols=150 Identities=10% Similarity=0.033 Sum_probs=90.1
Q ss_pred cCCceEEEEecCchhHHHHHHHHccCCc-EEEEecCCccccc------cCCCccEEEcCCChhhHHHHHHHHHhcCCCcC
Q psy616 26 VKKNNLLCFSSNKDFQNKIVESISSYTD-IIFIEQSDNIKIS------PNDTVHYKINKDNINDYTFILNKIYEKDKKID 98 (1152)
Q Consensus 26 ~~~~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~~------~~~~~~~~i~p~~~~d~~~l~~~l~~~~~~~~ 98 (1152)
.+++..||.....|++.+++++|.++|. |+.+...+ .... ......+..+..+.++.+..+..........+
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPN-SGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD 81 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT-SSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence 4678889999999999999999998876 55544332 1111 01122366677788888888888888778888
Q ss_pred EEEEeCCCCCc-----------cccc--------ChHHHHHHHHHHHhC---C------CCceEEEEEcccccc-cCCcc
Q psy616 99 SVFYLWPLEDK-----------NCIY--------NIMPIIYFLQAVKKS---K------LYLRKLIISGISINK-KNEED 149 (1152)
Q Consensus 99 ~iv~lw~~~~~-----------~~~~--------~~~~l~~l~qal~~~---~------~~~~~~~v~~~~~~~-~~~~~ 149 (1152)
.+++.-..... ...+ ++.+.+++.|++... . ....++.++...... .....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~ 161 (248)
T d2o23a1 82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA 161 (248)
T ss_dssp EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence 88776433110 0011 234567777775331 1 122344444322111 11223
Q ss_pred chhhhHHHHHHHHHHHHHHcCCCcEEE
Q psy616 150 LYYCYFNSWVAFERSLHIIMPETQISI 176 (1152)
Q Consensus 150 ~~~~~~~~~~g~~r~~~~e~p~~~~~~ 176 (1152)
.+...-+++.+|+|+++.|+-...+++
T Consensus 162 ~Y~asKaal~~lt~~la~e~~~~gIrv 188 (248)
T d2o23a1 162 AYSASKGGIVGMTLPIARDLAPIGIRV 188 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcce
Confidence 344445678999999999996443444
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.00 E-value=4.9 Score=41.23 Aligned_cols=149 Identities=11% Similarity=0.067 Sum_probs=86.6
Q ss_pred ceEEEEecCchhHHHHHHHHccCCc-EEEEe--cCCcccc----------ccCCC--ccEEEcCCChhhHHHHHHHHHhc
Q psy616 29 NNLLCFSSNKDFQNKIVESISSYTD-IIFIE--QSDNIKI----------SPNDT--VHYKINKDNINDYTFILNKIYEK 93 (1152)
Q Consensus 29 ~~~lvf~d~~~~~~~l~~~l~~~~~-~~~v~--~~~~~~~----------~~~~~--~~~~i~p~~~~d~~~l~~~l~~~ 93 (1152)
+.+||.....|++.+++++|.++|. ++.|. ..+.... ..... ..+..+-.++++..++++.+.+
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~- 81 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE- 81 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT-
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc-
Confidence 3456667789999999999987763 33332 1111100 00111 1366788899999999988754
Q ss_pred CCCcCEEEEeCCCCCcccc-------------cChHHHHHHHHHHH----hCCCCceEEEEEcccccc-cCCccchhhhH
Q psy616 94 DKKIDSVFYLWPLEDKNCI-------------YNIMPIIYFLQAVK----KSKLYLRKLIISGISINK-KNEEDLYYCYF 155 (1152)
Q Consensus 94 ~~~~~~iv~lw~~~~~~~~-------------~~~~~l~~l~qal~----~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~ 155 (1152)
+.+|.+++.-........ -++.+.+++.|++. +.+ ..+++.++..+... ......+...-
T Consensus 82 -g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~~~~~Y~asK 159 (285)
T d1jtva_ 82 -GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASK 159 (285)
T ss_dssp -SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred -cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCCCchHHHHHH
Confidence 568988887654221111 13467777877742 222 34555554432222 12233355555
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEec
Q psy616 156 NSWVAFERSLHIIMPETQISIVFAE 180 (1152)
Q Consensus 156 ~~~~g~~r~~~~e~p~~~~~~vd~~ 180 (1152)
+++.+|.++++.|+-...+++..+.
T Consensus 160 aal~~l~~~la~El~~~gIrVn~V~ 184 (285)
T d1jtva_ 160 FALEGLCESLAVLLLPFGVHLSLIE 184 (285)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHHHHHHHHhhccCcEEEEEe
Confidence 7789999999999864444443333
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=83.21 E-value=3.8 Score=41.25 Aligned_cols=148 Identities=7% Similarity=-0.007 Sum_probs=81.9
Q ss_pred CceEEEEecCchhHHHHHHHHccCCc--EEEEecCC--cccc-------ccCC-C-ccEEEcCCChhhHHHHHHHHHhcC
Q psy616 28 KNNLLCFSSNKDFQNKIVESISSYTD--IIFIEQSD--NIKI-------SPND-T-VHYKINKDNINDYTFILNKIYEKD 94 (1152)
Q Consensus 28 ~~~~lvf~d~~~~~~~l~~~l~~~~~--~~~v~~~~--~~~~-------~~~~-~-~~~~i~p~~~~d~~~l~~~l~~~~ 94 (1152)
.+++||.....|++.+++++|.++|. ++++...+ .... .... . ..+..+-.++++..++++.+.+.
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~- 87 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD- 87 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence 46899999999999999999988764 44443211 0000 0011 1 12567788999999999988665
Q ss_pred CCcCEEEEeCCCCCccccc-------------ChHHHHHHHHHHHhCCCCceEEEEEccccccc-CCccchhhhHHHHHH
Q psy616 95 KKIDSVFYLWPLEDKNCIY-------------NIMPIIYFLQAVKKSKLYLRKLIISGISINKK-NEEDLYYCYFNSWVA 160 (1152)
Q Consensus 95 ~~~~~iv~lw~~~~~~~~~-------------~~~~l~~l~qal~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~g 160 (1152)
..++.|+|........... .+...+.+.+++.... ...+++++..+.... .....+...-+.+.+
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~ 166 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPGLGGYAPGNAYLDG 166 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTTCTTTHHHHHHHHH
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCcccHHHHHHHHhHHH
Confidence 4789999987753221111 2345556666654433 233444443221111 112223222234555
Q ss_pred HHHHHHHHcCCCcEEEEEe
Q psy616 161 FERSLHIIMPETQISIVFA 179 (1152)
Q Consensus 161 ~~r~~~~e~p~~~~~~vd~ 179 (1152)
|.+.++.+ ++.+..|..
T Consensus 167 la~~~~~~--Gi~v~~I~p 183 (259)
T d2fr1a1 167 LAQQRRSD--GLPATAVAW 183 (259)
T ss_dssp HHHHHHHT--TCCCEEEEE
T ss_pred HHHHHHhC--CCCEEECCC
Confidence 65555443 555555544
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=82.23 E-value=1.8 Score=40.42 Aligned_cols=38 Identities=24% Similarity=0.198 Sum_probs=28.6
Q ss_pred cccCCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCc
Q psy616 232 YIKQGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSK 271 (1152)
Q Consensus 232 ~~~~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~ 271 (1152)
.++++.++||.| .|++|...++.+...|+ +++.+.+++
T Consensus 24 ~~~~g~~vlv~G-~G~iG~~a~~~a~~~g~-~v~~~~~~~ 61 (168)
T d1rjwa2 24 GAKPGEWVAIYG-IGGLGHVAVQYAKAMGL-NVVAVDIGD 61 (168)
T ss_dssp TCCTTCEEEEEC-CSTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCCCCCEEEEee-cccchhhhhHHHhcCCC-eEeccCCCH
Confidence 356889999986 59999988887777777 555555554
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=82.05 E-value=1.4 Score=41.86 Aligned_cols=72 Identities=13% Similarity=0.093 Sum_probs=47.8
Q ss_pred CCCEEEEECCchhHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHhCCCcEEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy616 235 QGGTYLITGGTGRLGMLFSDYLINKYSTNLILSGRSKL-NSIIYKKLKKFNNKAIYIQVDVSDKLKMISEINSIINNIGP 313 (1152)
Q Consensus 235 ~~~~~LITGg~gGIG~~lA~~La~~Ga~~vil~~R~~~-~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~~G~ 313 (1152)
+++.+||.|+ ||-+++++..|.+.|. +|.+..|+.. .+++.+.+...+ .+..+..| + .....
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~~~--~------------~~~~~ 79 (170)
T d1nyta1 17 PGLRILLIGA-GGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTG-SIQALSMD--E------------LEGHE 79 (170)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGS-SEEECCSG--G------------GTTCC
T ss_pred CCCEEEEECC-cHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcc-cccccccc--c------------ccccc
Confidence 5788999985 7889999999999997 5888888843 344444444433 23332221 1 11246
Q ss_pred eeEEEEcccc
Q psy616 314 IDGVLHIAGI 323 (1152)
Q Consensus 314 idgvIh~AG~ 323 (1152)
.|.|||+.-+
T Consensus 80 ~dliIN~Tp~ 89 (170)
T d1nyta1 80 FDLIINATSS 89 (170)
T ss_dssp CSEEEECCSC
T ss_pred cceeeccccc
Confidence 8999998744
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=81.84 E-value=6.4 Score=39.47 Aligned_cols=153 Identities=8% Similarity=0.022 Sum_probs=85.6
Q ss_pred CCceEEEEe--cCchhHHHHHHHHccCCc-EEEEecCCcccc----c---cCCCccEEEcCCChhhHHHHHHHHHhc---
Q psy616 27 KKNNLLCFS--SNKDFQNKIVESISSYTD-IIFIEQSDNIKI----S---PNDTVHYKINKDNINDYTFILNKIYEK--- 93 (1152)
Q Consensus 27 ~~~~~lvf~--d~~~~~~~l~~~l~~~~~-~~~v~~~~~~~~----~---~~~~~~~~i~p~~~~d~~~l~~~l~~~--- 93 (1152)
.+++.||+. ...|++.+++++|.+.|. |++.... .... . ......+..+-.++++...+++.+.+.
T Consensus 5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~-~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~ 83 (268)
T d2h7ma1 5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD-RLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 83 (268)
T ss_dssp TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECS-CHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCC-hHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence 456777776 567899999999988776 5444322 2111 1 111224777888999999998888654
Q ss_pred CCCcCEEEEeCCCCCccc-------ccC-----------hHHHHHHHHHHHhCCCCceEEEEE-cccccccCCccchhhh
Q psy616 94 DKKIDSVFYLWPLEDKNC-------IYN-----------IMPIIYFLQAVKKSKLYLRKLIIS-GISINKKNEEDLYYCY 154 (1152)
Q Consensus 94 ~~~~~~iv~lw~~~~~~~-------~~~-----------~~~l~~l~qal~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~ 154 (1152)
...+|.++|......... ... +...+...++...........+++ ............+...
T Consensus 84 ~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~s 163 (268)
T d2h7ma1 84 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVA 163 (268)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHHH
T ss_pred CCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhcc
Confidence 456888898876532111 011 123333333332222122222222 2222222222233334
Q ss_pred HHHHHHHHHHHHHHcCC--CcEEEEEec
Q psy616 155 FNSWVAFERSLHIIMPE--TQISIVFAE 180 (1152)
Q Consensus 155 ~~~~~g~~r~~~~e~p~--~~~~~vd~~ 180 (1152)
..++.+|.|+++.|+-. +++..|-..
T Consensus 164 K~a~~~ltr~lA~e~~~~gIrVN~V~PG 191 (268)
T d2h7ma1 164 KSALESVNRFVAREAGKYGVRSNLVAAG 191 (268)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred ccchhhccccchhhhhccCCcceEEecC
Confidence 46688999999999854 666666533
|