Diaphorina citri psyllid: psy6196


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
MGAYHTLDLELNRKFELSKPEWDSLYTARIGLKSPFTPAVGYYYYCGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMMQEGLANIMLITASMSLVRTKIETNIPRKRRGYFCATLYIVPI
cccEEEEEEEEEEEEEEEcCEEEEEEEEEEEEEEccccccCEEEEEEEEEEcccccccccEEEEEEEcccCEEEEcccccHHHHHHHHHHccccccccEEEEEEEccEEEEEEEcccEEEEEEEEEECcccccccccEEEEEEEEc
****HTLDLELNRKFELSKPEWDSLYTARIGLKSPFTPAVGYYYYCGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMMQEGLANIMLITASMSLVRTKIETNIPRKRRGYFCATLYIVPI
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MGAYHTLDLELNRKFELSKPEWDSLYTARIGLKSPFTPAVGYYYYCGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMMQEGLANIMLITASMSLVRTKIETNIPRKRRGYFCATLYIVPI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein pelota Required prior to the first meiotic division for spindle formation and nuclear envelope breakdown during spermatogenesis. It is also required for normal eye patterning and for mitotic divisions in the ovary. Required for ovarian germ line stem cell self-renewal. May play a role in regulating translation. May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs. May have ribonuclease activity.confidentP48612
Protein pelota homolog Required for normal chromosome segregation during cell division and genomic stability (By similarity). May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs. May have ribonuclease activity.confidentQ7ZWC4
Protein pelota homolog Required for normal chromosome segregation during cell division and genomic stability (By similarity). May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs. May have ribonuclease activity.confidentQ5XIP1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0001745 [BP]compound eye morphogenesisprobableGO:0048749, GO:0032502, GO:0009887, GO:0032501, GO:0044707, GO:0007423, GO:0048592, GO:0048856, GO:0044767, GO:0048513, GO:0001654, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0008315 [BP]meiotic G2/MI transitionprobableGO:0007126, GO:0007127, GO:0051321, GO:0000003, GO:0008150, GO:0009987, GO:0044770, GO:0044771, GO:0048610, GO:0022402, GO:0044699, GO:0044763, GO:0007049
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0000212 [BP]meiotic spindle organizationprobableGO:0006996, GO:0048610, GO:0051321, GO:0000003, GO:0071822, GO:0043933, GO:0071840, GO:0009987, GO:0044763, GO:0016043, GO:0008150, GO:0007051, GO:0007017, GO:0000226, GO:0044699, GO:0022402, GO:0007010, GO:0007049
GO:0048132 [BP]female germ-line stem cell divisionprobableGO:0048610, GO:0042078, GO:0030154, GO:0048468, GO:0019953, GO:0007292, GO:0008356, GO:0051301, GO:0000003, GO:0048869, GO:0007276, GO:0048477, GO:0032502, GO:0032501, GO:0048609, GO:0032504, GO:0009987, GO:0007281, GO:0022414, GO:0044763, GO:0022412, GO:0044767, GO:0044699, GO:0044702, GO:0003006, GO:0048856, GO:0008150, GO:0017145
GO:0048137 [BP]spermatocyte divisionprobableGO:0044702, GO:0048610, GO:0000003, GO:0032504, GO:0022412, GO:0019953, GO:0022414, GO:0007283, GO:0032501, GO:0044763, GO:0044699, GO:0007276, GO:0048232, GO:0008150, GO:0009987, GO:0051301, GO:0048609
GO:0030718 [BP]germ-line stem cell maintenanceprobableGO:0030154, GO:0048468, GO:0050789, GO:0044699, GO:0048863, GO:0048864, GO:0048869, GO:0065007, GO:0048519, GO:0032502, GO:0032501, GO:0050793, GO:0009987, GO:0050794, GO:0044767, GO:0045596, GO:0045595, GO:0008150, GO:0051093, GO:0019827, GO:0044707, GO:0048856, GO:0044763, GO:0048523
GO:0007141 [BP]male meiosis IprobableGO:0007126, GO:0007127, GO:0051321, GO:0000003, GO:0044699, GO:0009987, GO:0008150, GO:0048610, GO:0022402, GO:0007049, GO:0044763, GO:0007140
GO:0051078 [BP]meiotic nuclear envelope disassemblyprobableGO:0006996, GO:0006997, GO:0030397, GO:0048610, GO:0051321, GO:0000003, GO:0016044, GO:0071840, GO:0009987, GO:0051081, GO:0006998, GO:0008150, GO:0061024, GO:0022402, GO:0044699, GO:0044763, GO:0022411, GO:0007049, GO:0016043
GO:0006412 [BP]translationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MCA, chain B
Confidence level:very confident
Coverage over the Query: 31-135
View the alignment between query and template
View the model in PyMOL
Template: 3MCA, chain B
Confidence level:confident
Coverage over the Query: 1-36
View the alignment between query and template
View the model in PyMOL