Diaphorina citri psyllid: psy6213

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

MAYLSPVHKHGLKADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIKIFIASSRVSIIPRAENIKIFITSSRVL

ccccccEEEEECcccccEEEEccccEEEEEEccccEEEEEEcccccCCcccccEEEEEEccccccEEEEEcccccEEEEEcccccccccEEEcccccccEEEEEEEcccccEEEEEcccccEEEEEcccccEEEEcccccccEEEEEEccccccEEEEECccccEEEEEcccccCEcEEECcccccEEEEEEcccccEEEEccccccEEEEEccccccEEEEccccccEEEEEEccccccEEEEcccccccEEEEEEcccccccEEEcccccccEEEEEEcccccEEEEEcccccccccEEEEEEcccccCEEEECcccccEEEEccccc

*AYLSPVHKHGLKADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIKIFIASSRVSIIPRAENIKIFITSSRVL

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
WD repeat-containing protein 24		confident	Q7ZVL2
WD repeat-containing protein 24		confident	Q5ZMV9
WD repeat-containing protein 24		confident	Q8CFJ9

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0045502 [MF]	dynein binding	probable	GO:0003674, GO:0005488, GO:0005515
GO:0043231 [CC]	intracellular membrane-bounded organelle	probable	GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0015630 [CC]	microtubule cytoskeleton	probable	GO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0007017 [BP]	microtubule-based process	probable	GO:0008150, GO:0009987, GO:0044763, GO:0044699
GO:0043234 [CC]	protein complex	probable	GO:0005575, GO:0032991
GO:0044430 [CC]	cytoskeletal part	probable	GO:0005856, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0043226, GO:0044422
GO:0042995 [CC]	cell projection	probable	GO:0005575, GO:0044464, GO:0005623

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 2-302
View the alignment between query and template
View the model in PyMOL

Template: 2XYI, chain A
Confidence level:very confident
Coverage over the Query: 48-306
View the alignment between query and template
View the model in PyMOL