Diaphorina citri psyllid: psy6218

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530---
MAFNVLRDKSFYTHGGRGNQEEFGLLSLEYDENFCMGGPGVIMSRATLALVAPHIKYCLKNLYTTHEDVELGRCVQKFAGIPFLSSRNRREDVDMIGESQPLRKQTSVQDKIRLGRQSNPRPSTYKASEVSLSTKFKLGLWSPAIELFFLCPQDFAWASTWASSCGRNFSVSPLSISQRQGPRPTPFQMRGPYSREGRRLSTGLCMGLYLGVLLRPKFLSLAALHFSTPRPAADPVSDAEAILPRGEETQGQTDGWSSSAGEKGRGISDVGLSESGLLFVGVMTANSYLNTRATSVYDTWARDIPATQGQTDGWSSSGGEKGRGISDVGLSESGLLFVGVMTANSYLNTRATSVYDTWARDIPGRVAFFTSESSTLPAARPDLPLVKLRGVDDSYPPQKKSFLMLQYMWERYGDKYEWFMRADDDLYVRGERLARMLRSVDSSKPQFIGQAGRGNQEEFGLLSLEYDENFCMGGPGVIMSRATLALVAPHIKYCLKNLYTTHEDVELGRCVQKFAGIPCTWSYEVSITSLYFF
ccccccccccccccccccccHHccccccccccccccccccEEEEHHHHHHHcccHHHHHHHHcccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEHHHHHHHHHHHccccccHHHHHHcccccccHHHHcccccccccccccccccccccccccccccccccccccccCCHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEccccccccccccccEEECccccccccHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEHHHHHHHHHcccccccEEEECccccccccccccccccccccccccccccccHHHHHHHcccHHHHcccccccHHHHHHHHHHHHcccccccccEEccccccccc
***NVLRDKSFYTHGGRGNQEEFGLLSLEYDENFCMGGPGVIMSRATLALVAPHIKYCLKNLYTTHEDVELGRCVQKFAGIPFLSSRNRREDVDM***********SVQDKIRLGRQSNPRPSTYKASEVSLSTKFKLGLWSPAIELFFLCPQDFAWASTWASSCGRNFS**********************YSREGRRLSTGLCMGLYLGVLLRPKFLSLAALHF********************************************GLSESGLLFVGVMTANSYLNTRATSVYDT****************************VGLSESGLLFVGVMTANSYLNTRATSVYDTWARDIPGRVAFFTSESSTLPAARPDLPLVKLRGVDDSYPPQKKSFLMLQYMWERYGDKYEWFMRADDDLYVRGERLARMLRSVDSSKPQFIGQAGRGNQEEFGLLSLEYDENFCMGGPGVIMSRATLALVAPHIKYCLKNLYTTHEDVELGRCVQKFAGIPCTWSYEVSITSLYFF
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MAFNVLRDKSFYTHGGRGNQEEFGLLSLEYDENFCMGGPGVIMSRATLALVAPHIKYCLKNLYTTHEDVELGRCVQKFAGIPFLSSRNRREDVDMIGESQPLRKQTSVQDKIRLGRQSNPRPSTYKASEVSLSTKFKLGLWSPAIELFFLCPQDFAWASTWASSCGRNFSVSPLSISQRQGPRPTPFQMRGPYSREGRRLSTGLCMGLYLGVLLRPKFLSLAALHFSTPRPAADPVSDAEAILPRGEETQGQTDGWSSSAGEKGRGISDVGLSESGLLFVGVMTANSYLNTRATSVYDTWARDIPATQGQTDGWSSSGGEKGRGISDVGLSESGLLFVGVMTANSYLNTRATSVYDTWARDIPGRVAFFTSESSTLPAARPDLPLVKLRGVDDSYPPQKKSFLMLQYMWERYGDKYEWFMRADDDLYVRGERLARMLRSVDSSKPQFIGQAGRGNQEEFGLLSLEYDENFCMGGPGVIMSRATLALVAPHIKYCLKNLYTTHEDVELGRCVQKFAGIPCTWSYEVSITSLYFF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Chondroitin sulfate synthase 1 Has both beta-1,3-glucuronic acid and beta-1,4-N-acetylgalactosamine transferase activity. Transfers glucuronic acid (GlcUA) from UDP-GlcUA and N-acetylgalactosamine (GalNAc) from UDP-GalNAc to the non-reducing end of the elongating chondroitin polymer.confidentQ6ZQ11

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0047238 [MF]glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activityprobableGO:0003824, GO:0016740, GO:0003674, GO:0016757, GO:0016758, GO:0008376, GO:0008194
GO:0008150 [BP]biological_processprobable
GO:0005576 [CC]extracellular regionprobableGO:0005575

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2J0A, chain A
Confidence level:very confident
Coverage over the Query: 331-453,468-527
View the alignment between query and template
View the model in PyMOL
Template: 2J0A, chain A
Confidence level:confident
Coverage over the Query: 7-17,32-90
View the alignment between query and template
View the model in PyMOL