Diaphorina citri psyllid: psy6236

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNPNRN
cEEEEEcccccccEEEEEEEEEEccEEEEEECcccccEEEEcccccCECccHHHcccccccccccccccccccccccccHHHccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEEEEccEEEEEEcccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccEEEEEEcccccccccccccEEEccccccccccHHHHHHccccccccccccccccHHHHHHHHcccccccccccccccccccccccEEEEEccccccccccEEEEEEEcccEEEEcccccc
MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQN****
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MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNPNRN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0035064 [MF]methylated histone residue bindingprobableGO:0042393, GO:0003674, GO:0005488, GO:0005515
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0003682 [MF]chromatin bindingprobableGO:0003674, GO:0005488

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3FEO, chain A
Confidence level:very confident
Coverage over the Query: 1-90,101-161,195-355
View the alignment between query and template
View the model in PyMOL
Template: 3H6Z, chain A
Confidence level:very confident
Coverage over the Query: 1-167,179-285
View the alignment between query and template
View the model in PyMOL