Psyllid ID: psy6236

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNPNRN
cEEEEEcccccccEEEEEEEEEEccEEEEEEEcccccEEEEcccccEEEccHHHHccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccEEEEEcccccccEEEEEEEEEEccEEEEEEcccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccEEEEEEcccccccccccccEEEcccccccccHHHHHHHccccccccccccccccHHHHHHHHcccccccccccccccccccccccEEEEEccccccccccEEEEEEEcccEEEEcccccc
cEEEEEccccccEEEEEEEEEEcccEEEEEEccccccEEEEccccccccccHHHccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEEEEccEEEEEEccccccccccEEEEccccccccccHHHcccccccccccccccccccHHHHHHHcccccccHHHccccccccccccccHHccccccccEEEEEEEEcccEEEEEEcccccccccccccEEEEcccccEEcccHHHHHcccEEccccccHHHccHHHHHHHHcccEccHHHcccccccccccccEEEEEEccccccEEEEEEEEEEcccEEEEEEccccc
mnlevvdkkrisQVKVATIEKIVGKRLqvhyyddddgfcchqdsplihpvgwarrtghlisapplytdrcakgirdrddatedlfplsvgtagtklspgtgqtggfVVGMklesvdplnlsDICVATVMKMEGYMMLEELdegmyyedptgmskisntatqpavnshhgpnrkikpvkhpglklqtpiayqkdtdpnvipiqkdgMAVCEKCgamgvkhafYTRERRFCSLAQVLNDRFMMIRVnsydedtnggldwfcyhmsspyifapgfcaahginltppkgythatfsweqycrdtnsipappelfnqkINGEALLTLTKekcfdltggkagpsikIAHLITCLNKivqnpnrn
mnlevvdkkrisqvkvATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHlisapplytdRCAKGIRDRDDATEDLFPLsvgtagtklspgtgqTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATqpavnshhgpnrkikpvkhpGLKLQTpiayqkdtdpnVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITClnkivqnpnrn
MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNPNRN
*********RISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYY***************************************TPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIV******
MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPI*****************HAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQN****
MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNT************NRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNPNRN
MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQN****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNPNRN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query358 2.2.26 [Sep-21-2011]
Q29L50 1274 Polycomb protein Sfmbt OS yes N/A 0.374 0.105 0.541 2e-34
Q9VK33 1220 Polycomb protein Sfmbt OS yes N/A 0.374 0.109 0.548 1e-33
Q1JQD9706 Lethal(3)malignant brain yes N/A 0.751 0.381 0.308 9e-24
Q969R5705 Lethal(3)malignant brain yes N/A 0.743 0.377 0.320 1e-23
Q5R737705 Lethal(3)malignant brain yes N/A 0.762 0.387 0.324 3e-23
P59178703 Lethal(3)malignant brain yes N/A 0.745 0.379 0.316 7e-23
Q3MIF2703 Lethal(3)malignant brain yes N/A 0.754 0.384 0.309 7e-23
Q32N90621 MBT domain-containing pro N/A N/A 0.703 0.405 0.297 4e-21
Q6DIN3651 MBT domain-containing pro yes N/A 0.703 0.387 0.290 1e-19
Q6P5G3631 MBT domain-containing pro no N/A 0.729 0.413 0.289 1e-19
>sp|Q29L50|SMBT_DROPS Polycomb protein Sfmbt OS=Drosophila pseudoobscura pseudoobscura GN=Sfmbt PE=3 SV=2 Back     alignment and function desciption
 Score =  147 bits (370), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/144 (54%), Positives = 97/144 (67%), Gaps = 10/144 (6%)

Query: 1   MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLI 60
           +NLE VDK RISQV++AT+ KIVGKRL + Y+D DDGF CH+DSP+IHPVGWA   GH +
Sbjct: 719 LNLECVDKDRISQVRLATVTKIVGKRLFLRYFDTDDGFWCHEDSPIIHPVGWATTVGHNL 778

Query: 61  SAPPLYTDRCAKGIR-----DRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESV 115
           +AP  Y +R   G         DDAT +LF ++       L    G+T GF+ GMKLE+V
Sbjct: 779 AAPQDYLERMLAGREAMIEVHEDDATIELFKMNFTFDEYFLD---GKTNGFIEGMKLEAV 835

Query: 116 DPLNLSDICVATVMKME--GYMML 137
           DPLNLS IC ATVM +   GYMM+
Sbjct: 836 DPLNLSSICPATVMAVLKFGYMMI 859
Polycomb group (PcG) protein that binds to the Polycomb response elements (PREs) found in the regulatory regions of many genes. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Necessary but not sufficient to recruit a functional PcG repressive complex that represses target genes, suggesting that the recruitment of the distinct PRC1 complex is also required to allow a subsequent repression.
Drosophila pseudoobscura pseudoobscura (taxid: 46245)
>sp|Q9VK33|SMBT_DROME Polycomb protein Sfmbt OS=Drosophila melanogaster GN=Sfmbt PE=1 SV=2 Back     alignment and function description
>sp|Q1JQD9|LMBL2_BOVIN Lethal(3)malignant brain tumor-like protein 2 OS=Bos taurus GN=L3MBTL2 PE=2 SV=1 Back     alignment and function description
>sp|Q969R5|LMBL2_HUMAN Lethal(3)malignant brain tumor-like protein 2 OS=Homo sapiens GN=L3MBTL2 PE=1 SV=1 Back     alignment and function description
>sp|Q5R737|LMBL2_PONAB Lethal(3)malignant brain tumor-like protein 2 OS=Pongo abelii GN=L3MBTL2 PE=2 SV=1 Back     alignment and function description
>sp|P59178|LMBL2_MOUSE Lethal(3)malignant brain tumor-like protein 2 OS=Mus musculus GN=L3mbtl2 PE=1 SV=2 Back     alignment and function description
>sp|Q3MIF2|LMBL2_RAT Lethal(3)malignant brain tumor-like protein 2 OS=Rattus norvegicus GN=L3mbtl2 PE=2 SV=1 Back     alignment and function description
>sp|Q32N90|MBTD1_XENLA MBT domain-containing protein 1 OS=Xenopus laevis GN=mbtd1 PE=2 SV=1 Back     alignment and function description
>sp|Q6DIN3|MBTD1_XENTR MBT domain-containing protein 1 OS=Xenopus tropicalis GN=mbtd1 PE=2 SV=1 Back     alignment and function description
>sp|Q6P5G3|MBTD1_MOUSE MBT domain-containing protein 1 OS=Mus musculus GN=Mbtd1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
242024870 968 conserved hypothetical protein [Pediculu 0.740 0.273 0.377 7e-38
328706730 851 PREDICTED: polycomb protein Sfmbt-like i 0.351 0.148 0.564 4e-37
328706728 861 PREDICTED: polycomb protein Sfmbt-like i 0.351 0.146 0.564 5e-37
91080415 886 PREDICTED: similar to Scm-related gene c 0.729 0.294 0.379 3e-36
157109988 732 hypothetical protein AaeL_AAEL005453 [Ae 0.756 0.370 0.387 6e-35
307187577 1434 Polycomb protein Sfmbt [Camponotus flori 0.743 0.185 0.381 3e-34
307207393 950 Polycomb protein Sfmbt [Harpegnathos sal 0.759 0.286 0.371 3e-34
383855458 952 PREDICTED: polycomb protein Sfmbt-like [ 0.712 0.267 0.383 2e-33
328785573 952 PREDICTED: LOW QUALITY PROTEIN: polycomb 0.712 0.267 0.383 3e-33
380013488 952 PREDICTED: polycomb protein Sfmbt-like [ 0.712 0.267 0.383 4e-33
>gi|242024870|ref|XP_002432849.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212518358|gb|EEB20111.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  164 bits (414), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 116/307 (37%), Positives = 164/307 (53%), Gaps = 42/307 (13%)

Query: 1   MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD---DDDGFCCHQDSPLIHPVGWARRTG 57
           +N+EVVDK +ISQV VA++++IVGKRL V YY+   DD+GF CH+DSPLIHPVGWA R G
Sbjct: 449 LNMEVVDKNKISQVCVASVKRIVGKRLHVEYYNAEPDDNGFWCHEDSPLIHPVGWASRVG 508

Query: 58  HLISAPPLYTDRCAKGIRDRDDATEDLFP----LSVGTAGTKLSPGTGQTGGFVVGMKLE 113
           HLI AP  Y +RC  G+ ++DDATE+LF      SV T    LS     +G F  GMKLE
Sbjct: 509 HLIEAPEDYIERCESGVIEKDDATEELFTAPFQTSVSTPRDALS-----SGKFEEGMKLE 563

Query: 114 SVDPLNLSDICVATVMKM--EGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPN 171
           +VDPLNL  ICVATVMK+  + Y+M+  +D   Y  D TG       ++ P +       
Sbjct: 564 AVDPLNLGSICVATVMKVLKDNYLMI-RIDS--YPPDATGSDWFCYHSSSPCIFPPRFSE 620

Query: 172 RKIKPVKHPGLKLQTPI----AYQKDTDPNVIP-------IQKDGMAVCEKCGAMGVKHA 220
           +   P+  P      P+     Y  +T   + P       +   G  V      M ++ A
Sbjct: 621 KNSIPLIPPK-DYNKPVFDWNDYIGETSAVLAPESLFEKIVPDYGFKV-----GMHLEAA 674

Query: 221 FYTRERRFC--SLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGI 278
                R  C  ++A+V+  R + I  + ++E+ +  LD+      SP I+  G+C+    
Sbjct: 675 DLMDPRLVCVATVARVVG-RLLKIHFDGWEEEYDQWLDF-----ESPDIYPVGWCSMVSH 728

Query: 279 NLTPPKG 285
            L  P+ 
Sbjct: 729 KLEGPRS 735

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328706730|ref|XP_003243184.1| PREDICTED: polycomb protein Sfmbt-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328706728|ref|XP_001946049.2| PREDICTED: polycomb protein Sfmbt-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|91080415|ref|XP_967817.1| PREDICTED: similar to Scm-related gene containing four mbt domains CG16975-PB [Tribolium castaneum] gi|270005578|gb|EFA02026.1| hypothetical protein TcasGA2_TC007651 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|157109988|ref|XP_001650907.1| hypothetical protein AaeL_AAEL005453 [Aedes aegypti] gi|108878844|gb|EAT43069.1| AAEL005453-PA, partial [Aedes aegypti] Back     alignment and taxonomy information
>gi|307187577|gb|EFN72589.1| Polycomb protein Sfmbt [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307207393|gb|EFN85119.1| Polycomb protein Sfmbt [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383855458|ref|XP_003703228.1| PREDICTED: polycomb protein Sfmbt-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|328785573|ref|XP_397193.4| PREDICTED: LOW QUALITY PROTEIN: polycomb protein Sfmbt [Apis mellifera] Back     alignment and taxonomy information
>gi|380013488|ref|XP_003690787.1| PREDICTED: polycomb protein Sfmbt-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
UNIPROTKB|Q29L50 1274 Sfmbt "Polycomb protein Sfmbt" 0.405 0.113 0.518 2.2e-54
FB|FBgn0032475 1220 Sfmbt "Scm-related gene contai 0.405 0.118 0.525 3.9e-54
UNIPROTKB|Q1JQD9706 L3MBTL2 "Lethal(3)malignant br 0.745 0.378 0.326 4.4e-26
UNIPROTKB|F1NHD0723 L3MBTL2 "Uncharacterized prote 0.751 0.372 0.324 5e-25
MGI|MGI:2443584703 L3mbtl2 "l(3)mbt-like 2 (Droso 0.743 0.378 0.328 1.3e-24
RGD|1308569703 L3mbtl2 "l(3)mbt-like 2 (Droso 0.743 0.378 0.325 2.1e-24
UNIPROTKB|Q3MIF2703 L3mbtl2 "Lethal(3)malignant br 0.743 0.378 0.325 2.1e-24
UNIPROTKB|Q5R737705 L3MBTL2 "Lethal(3)malignant br 0.765 0.388 0.325 2.7e-24
UNIPROTKB|Q969R5705 L3MBTL2 "Lethal(3)malignant br 0.765 0.388 0.325 3.5e-24
UNIPROTKB|F1SRC3707 L3MBTL2 "Uncharacterized prote 0.745 0.377 0.319 7.3e-24
UNIPROTKB|Q29L50 Sfmbt "Polycomb protein Sfmbt" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] Back     alignment and assigned GO terms
 Score = 369 (135.0 bits), Expect = 2.2e-54, Sum P(2) = 2.2e-54
 Identities = 82/158 (51%), Positives = 103/158 (65%)

Query:     1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLI 60
             +NLE VDK RISQV++AT+ KIVGKRL + Y+D DDGF CH+DSP+IHPVGWA   GH +
Sbjct:   719 LNLECVDKDRISQVRLATVTKIVGKRLFLRYFDTDDGFWCHEDSPIIHPVGWATTVGHNL 778

Query:    61 SAPPLYTDRCAKGIR-----DRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESV 115
             +AP  Y +R   G         DDAT +LF ++       L    G+T GF+ GMKLE+V
Sbjct:   779 AAPQDYLERMLAGREAMIEVHEDDATIELFKMNFTFDEYFLD---GKTNGFIEGMKLEAV 835

Query:   116 DPLNLSDICVATVMKME--GYMMLEELDEGMYYEDPTG 151
             DPLNLS IC ATVM +   GYMM+  +D   Y  D +G
Sbjct:   836 DPLNLSSICPATVMAVLKFGYMMIR-IDS--YQPDESG 870
GO:0005634 "nucleus" evidence=ISS
GO:0006342 "chromatin silencing" evidence=ISS
GO:0007446 "imaginal disc growth" evidence=ISS
GO:0035064 "methylated histone residue binding" evidence=ISS
FB|FBgn0032475 Sfmbt "Scm-related gene containing four mbt domains" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q1JQD9 L3MBTL2 "Lethal(3)malignant brain tumor-like protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NHD0 L3MBTL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:2443584 L3mbtl2 "l(3)mbt-like 2 (Drosophila)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1308569 L3mbtl2 "l(3)mbt-like 2 (Drosophila)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q3MIF2 L3mbtl2 "Lethal(3)malignant brain tumor-like protein 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R737 L3MBTL2 "Lethal(3)malignant brain tumor-like protein 2" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
UNIPROTKB|Q969R5 L3MBTL2 "Lethal(3)malignant brain tumor-like protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SRC3 L3MBTL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
pfam0282073 pfam02820, MBT, mbt repeat 3e-24
smart0056196 smart00561, MBT, Present in Drosophila Scm, l(3)mb 5e-23
smart0056196 smart00561, MBT, Present in Drosophila Scm, l(3)mb 7e-09
smart0056196 smart00561, MBT, Present in Drosophila Scm, l(3)mb 3e-08
pfam0282073 pfam02820, MBT, mbt repeat 4e-08
cd0958067 cd09580, SAM_Scm-like-4MBT, SAM domain of Scm-like 6e-08
pfam0282073 pfam02820, MBT, mbt repeat 6e-07
cd0950964 cd09509, SAM_Polycomb, SAM domain of Polycomb grou 2e-05
cd0958185 cd09581, SAM_Scm-like-4MBT1,2, SAM domain of Scm-l 0.002
>gnl|CDD|202414 pfam02820, MBT, mbt repeat Back     alignment and domain information 
 Score = 93.9 bits (234), Expect = 3e-24
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 1  MNLEVVDKKRISQVKVATIEKIVGKRLQVHY--YDDDDGFCCHQDSPLIHPVGWARRTGH 58
          M LE VD +  S +  AT+  + G RL++ +  +D D  F CH DSP IHPVGW  + GH
Sbjct: 1  MKLEAVDPRNPSLICPATVVTVRGYRLRLRFDGWDSDYDFWCHVDSPDIHPVGWCEKNGH 60

Query: 59 LISAPPLYTDR 69
          ++  PP Y  +
Sbjct: 61 VLQPPPGYRSK 71

The function of this repeat is unknown, but is found in a number of nuclear proteins such as drosophila sex comb on midleg protein. The repeat is found in up to four copies. The repeat contains a completely conserved glutamate at its amino terminus that may be important for function. Length = 73
>gnl|CDD|214723 smart00561, MBT, Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2 Back     alignment and domain information
>gnl|CDD|214723 smart00561, MBT, Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2 Back     alignment and domain information
>gnl|CDD|214723 smart00561, MBT, Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2 Back     alignment and domain information
>gnl|CDD|202414 pfam02820, MBT, mbt repeat Back     alignment and domain information
>gnl|CDD|188979 cd09580, SAM_Scm-like-4MBT, SAM domain of Scm-like-4MBT proteins of Polycomb group Back     alignment and domain information
>gnl|CDD|202414 pfam02820, MBT, mbt repeat Back     alignment and domain information
>gnl|CDD|188908 cd09509, SAM_Polycomb, SAM domain of Polycomb group Back     alignment and domain information
>gnl|CDD|188980 cd09581, SAM_Scm-like-4MBT1,2, SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 358
KOG3766|consensus 478 100.0
KOG3766|consensus 478 100.0
smart0056196 MBT Present in Drosophila Scm, l(3)mbt, and verteb 99.95
PF0282073 MBT: mbt repeat; InterPro: IPR004092 The function 99.94
smart0056196 MBT Present in Drosophila Scm, l(3)mbt, and verteb 99.92
PF0282073 MBT: mbt repeat; InterPro: IPR004092 The function 99.91
smart0074361 Agenet Tudor-like domain present in plant sequence 81.72
>KOG3766|consensus Back     alignment and domain information 
Probab=100.00  E-value=8.1e-54  Score=430.08  Aligned_cols=240  Identities=33%  Similarity=0.547  Sum_probs=214.7

Q ss_pred             CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--CCCCEEEeCCCCCeeccchhhhcCccccCCCCCC-cccccccc--
Q psy6236           1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYT-DRCAKGIR--   75 (358)
Q Consensus         1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~-~~~~~~~~--   75 (358)
                      ||||++|+.+++.+|+|||++++|+|++|+|+|  +.+|||+|++||+|||+|||+++|+.|+||.+|. .+.+.|..  
T Consensus        94 mklE~vd~~~~s~~~~asV~~v~g~Rl~l~~~g~~~~~dfW~~~~sp~i~pvGw~~~~g~~l~pP~~~~~~~~~s~~~~~  173 (478)
T KOG3766|consen   94 MKLEAVDPDNPSSTWIATVEEVCGGRLRLRFDGLDENYDFWLHALSPDIHPVGWCEKSGHKLQPPLGYRIRNEYSWEQYL  173 (478)
T ss_pred             ceEEEEecCCCceEEEEEEEeecccEEEEEecCcccCCccceecCCccccccccccccCcccCCCccccccccccccchh
Confidence            999999999999999999999999999999997  5699999999999999999999999999999997 44444421  


Q ss_pred             -----CccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCC
Q psy6236          76 -----DRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPT  150 (358)
Q Consensus        76 -----~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~  150 (358)
                           ++..++..+|.....        .....+.|++||||||||+.||..||||||++                    
T Consensus       174 ~k~~~~~~~~p~~~~~~~~~--------~~~~~~~F~vgmkLEavd~~np~~IcvATV~~--------------------  225 (478)
T KOG3766|consen  174 EKTLGQAELAPKRLFVREPS--------RDPPPSRFQVGMKLEAVDDLNPSAICVATVVE--------------------  225 (478)
T ss_pred             hhcccccccCcccccccccc--------cCCCCCcceeccEEEEeccCCCcceeeeehhe--------------------
Confidence                 134455555533221        12246899999999999999999999999999                    


Q ss_pred             CccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCccccccCceecccccccccCCceee
Q psy6236         151 GMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCS  230 (358)
Q Consensus       151 gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~at  230 (358)
                                                                                                      
T Consensus       226 --------------------------------------------------------------------------------  225 (478)
T KOG3766|consen  226 --------------------------------------------------------------------------------  225 (478)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCC-CCcccccCHhHHHhhcCCCCCCccc
Q psy6236         231 LAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPK-GYTHATFSWEQYCRDTNSIPAPPEL  309 (358)
Q Consensus       231 v~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~-gy~~~~F~W~~YL~~~~a~~aP~~~  309 (358)
                         |++++||+|++|+|+.+   .+|||| +.+|++|||||||.+||+.|+||+ +|....|.|.+|+.++++.+++..+
T Consensus       226 ---V~~~~~i~v~~d~~~~~---~~d~~~-~~~s~~I~Pv~~~~~~~~~L~ppk~~~~~~~~~~~~~~e~~~~~~~~~~~  298 (478)
T KOG3766|consen  226 ---VFDSREILVHFDGWDKS---ELDYWC-DHDSPKIFPVGWCCKNGDKLTPPKDYYEADNFKWEKYLEETGASAAPSRA  298 (478)
T ss_pred             ---ecccceEEEEeccCCCc---ccceeE-ecCCCceeeeeEhhhcCcccCCCcccccccccccccccccccccccchhc
Confidence               68999999999999873   289998 788899999999999999999999 8889999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236         310 FNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP  355 (358)
Q Consensus       310 F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~  355 (358)
                      |++..+.+.|++|||||++|+++|.+||||||.++...++-||+|-
T Consensus       299 ~~p~~p~~~~k~~~k~e~~d~~~p~~~~vatv~~~~~~~~~~h~d~  344 (478)
T KOG3766|consen  299 FNPRCPNHLFKVGMKLEAVDLRNPRLICVATVEKVCKTPLIIHFDG  344 (478)
T ss_pred             cCCCCCCccccccceeeeccccCCcccccccchhccccccccCCCC
Confidence            9999999999999999999999999999999999999999999984

>KOG3766|consensus Back     alignment and domain information
>smart00561 MBT Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2 Back     alignment and domain information
>PF02820 MBT: mbt repeat; InterPro: IPR004092 The function of the malignant brain tumor (MBT) repeat is unknown, but is found in a number of nuclear proteins involved in transcriptional repression Back     alignment and domain information
>smart00561 MBT Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2 Back     alignment and domain information
>PF02820 MBT: mbt repeat; InterPro: IPR004092 The function of the malignant brain tumor (MBT) repeat is unknown, but is found in a number of nuclear proteins involved in transcriptional repression Back     alignment and domain information
>smart00743 Agenet Tudor-like domain present in plant sequences Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
3h6z_A447 Crystal Structure Of The Four Mbt Repeats Of Drosop 9e-34
3h6z_A447 Crystal Structure Of The Four Mbt Repeats Of Drosop 6e-19
3f70_A456 Crystal Structure Of L3mbtl2-H4k20me1 Complex Lengt 5e-25
3cey_A474 Crystal Structure Of L3mbtl2 Length = 474 6e-25
3feo_A437 The Crystal Structure Of Mbtd1 Length = 437 9e-21
3feo_A437 The Crystal Structure Of Mbtd1 Length = 437 2e-18
4fl6_A332 Crystal Structure Of The Complex Of The 3-Mbt Repea 2e-13
4fl6_A332 Crystal Structure Of The Complex Of The 3-Mbt Repea 4e-12
3ut1_A324 Crystal Structure Of The 3-Mbt Repeat Domain Of L3m 2e-13
3ut1_A324 Crystal Structure Of The 3-Mbt Repeat Domain Of L3m 4e-12
2rhy_A319 Crystal Structure Of The 3-Mbt Repeats From Human L 3e-13
2rhy_A319 Crystal Structure Of The 3-Mbt Repeats From Human L 6e-07
2rhu_A329 Crystal Structure Of The 3-Mbt Repeats From Human L 4e-13
2rhu_A329 Crystal Structure Of The 3-Mbt Repeats From Human L 7e-07
1oz2_A331 Crystal Structure Of 3-Mbt Repeats Of Lethal (3) Ma 1e-12
1oz2_A331 Crystal Structure Of 3-Mbt Repeats Of Lethal (3) Ma 9e-07
2rjc_A331 Crystal Structure Of L3mbtl1 Protein In Complex Wit 1e-12
2rjc_A331 Crystal Structure Of L3mbtl1 Protein In Complex Wit 8e-07
3oq5_A345 Crystal Structure Of The 3-Mbt Domain From Human L3 1e-12
3oq5_A345 Crystal Structure Of The 3-Mbt Domain From Human L3 1e-06
2rhz_A319 Crystal Structure Of The 3-Mbt Repeats From Human L 1e-12
2rhz_A319 Crystal Structure Of The 3-Mbt Repeats From Human L 7e-07
2pqw_A323 Crystal Structure Of L3mbtl1 In Complex With H4k20m 1e-12
2pqw_A323 Crystal Structure Of L3mbtl1 In Complex With H4k20m 9e-07
2rhi_A345 Crystal Structure Of The 3-mbt Domain From Human L3 1e-12
2rhi_A345 Crystal Structure Of The 3-mbt Domain From Human L3 8e-07
2ri3_A319 Crystal Structure Of The 3-Mbt Repeats From Human L 1e-12
2ri3_A319 Crystal Structure Of The 3-Mbt Repeats From Human L 6e-07
2ri5_A319 Crystal Structure Of The 3-Mbt Repeats From Human L 2e-12
2ri5_A319 Crystal Structure Of The 3-Mbt Repeats From Human L 7e-07
2ri2_A319 Crystal Structure Of The 3-Mbt Repeats From Human L 2e-12
2ri2_A319 Crystal Structure Of The 3-Mbt Repeats From Human L 7e-07
1oyx_A331 Crystal Structure Of 3-Mbt Repeats Of Lethal (3) Ma 2e-11
1oyx_A331 Crystal Structure Of 3-Mbt Repeats Of Lethal (3) Ma 4e-06
2biv_A243 Crystal Structure Of The Wild-Type Mbt Domains Of H 3e-07
1wjq_A107 Solution Structure Of The Third Mbt Domain From Hum 4e-07
4edu_A215 The Mbt Repeats Of Human Scml2 In A Complex With Hi 7e-07
1oi1_A221 Crystal Structure Of The Mbt Domains Of Human Scml2 7e-07
1wjs_A127 Solution Structure Of The First Mbt Domain From Hum 1e-06
2p0k_A212 Crystal Structure Of Scmh1 Length = 212 5e-05
>pdb|3H6Z|A Chain A, Crystal Structure Of The Four Mbt Repeats Of Drosophila Melanogaster Sfmbt In Complex With Peptide Rhr (Me)k Vlr Length = 447 Back     alignment and structure 
Iteration: 1

 Score =  140 bits (354), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 85/183 (46%), Positives = 107/183 (58%), Gaps = 24/183 (13%)
Query: 1   MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLI 60
           +NLE VDK RISQV++AT+ KIVG RL + Y+D DDGF CH+DSP+IHPVGWA   GH +
Sbjct: 161 LNLECVDKDRISQVRLATVTKIVGDRLFLRYFDSDDGFWCHEDSPIIHPVGWATTVGHNL 220
Query: 61  SAPPLYTDRCAKGIR-----DRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESV 115
           +AP  Y +R   G         DDAT +LF ++  T     S   G+T  FV GMKLE+V
Sbjct: 221 AAPQDYLERMLAGREAMIEVHEDDATIELFKMNF-TFDEYYS--DGKTNSFVEGMKLEAV 277
Query: 116 DPLNLSDICVATVMKME--GYMMLE---------ELDEGMYYED-----PTGMSKISNTA 159
           DPLNLS IC ATVM +   GYMM+            D   Y+E      P G   ++N +
Sbjct: 278 DPLNLSSICPATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNIS 337
Query: 160 TQP 162
             P
Sbjct: 338 VTP 340
>pdb|3H6Z|A Chain A, Crystal Structure Of The Four Mbt Repeats Of Drosophila Melanogaster Sfmbt In Complex With Peptide Rhr (Me)k Vlr Length = 447 Back     alignment and structure
>pdb|3F70|A Chain A, Crystal Structure Of L3mbtl2-H4k20me1 Complex Length = 456 Back     alignment and structure
>pdb|3CEY|A Chain A, Crystal Structure Of L3mbtl2 Length = 474 Back     alignment and structure
>pdb|3FEO|A Chain A, The Crystal Structure Of Mbtd1 Length = 437 Back     alignment and structure
>pdb|3FEO|A Chain A, The Crystal Structure Of Mbtd1 Length = 437 Back     alignment and structure
>pdb|4FL6|A Chain A, Crystal Structure Of The Complex Of The 3-Mbt Repeat Domain Of L3mbtl3 And Unc1215 Length = 332 Back     alignment and structure
>pdb|4FL6|A Chain A, Crystal Structure Of The Complex Of The 3-Mbt Repeat Domain Of L3mbtl3 And Unc1215 Length = 332 Back     alignment and structure
>pdb|3UT1|A Chain A, Crystal Structure Of The 3-Mbt Repeat Domain Of L3mbtl3 Length = 324 Back     alignment and structure
>pdb|3UT1|A Chain A, Crystal Structure Of The 3-Mbt Repeat Domain Of L3mbtl3 Length = 324 Back     alignment and structure
>pdb|2RHY|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 Bound To Monomethyl-Lysine Length = 319 Back     alignment and structure
>pdb|2RHY|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 Bound To Monomethyl-Lysine Length = 319 Back     alignment and structure
>pdb|2RHU|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 Bound To Dimethyl-Lysine And In Chimera With Histone H3.3(28-34) Length = 329 Back     alignment and structure
>pdb|2RHU|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 Bound To Dimethyl-Lysine And In Chimera With Histone H3.3(28-34) Length = 329 Back     alignment and structure
>pdb|1OZ2|A Chain A, Crystal Structure Of 3-Mbt Repeats Of Lethal (3) Malignant Brain Tumor (Native-Ii) At 1.55 Angstrom Length = 331 Back     alignment and structure
>pdb|1OZ2|A Chain A, Crystal Structure Of 3-Mbt Repeats Of Lethal (3) Malignant Brain Tumor (Native-Ii) At 1.55 Angstrom Length = 331 Back     alignment and structure
>pdb|2RJC|A Chain A, Crystal Structure Of L3mbtl1 Protein In Complex With Mes Length = 331 Back     alignment and structure
>pdb|2RJC|A Chain A, Crystal Structure Of L3mbtl1 Protein In Complex With Mes Length = 331 Back     alignment and structure
>pdb|3OQ5|A Chain A, Crystal Structure Of The 3-Mbt Domain From Human L3mbtl1 In Complex With P53k382me1 Length = 345 Back     alignment and structure
>pdb|3OQ5|A Chain A, Crystal Structure Of The 3-Mbt Domain From Human L3mbtl1 In Complex With P53k382me1 Length = 345 Back     alignment and structure
>pdb|2RHZ|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 With D355n Point Mutation Length = 319 Back     alignment and structure
>pdb|2RHZ|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 With D355n Point Mutation Length = 319 Back     alignment and structure
>pdb|2PQW|A Chain A, Crystal Structure Of L3mbtl1 In Complex With H4k20me2 (Residues 17- 25), Trigonal Form Length = 323 Back     alignment and structure
>pdb|2PQW|A Chain A, Crystal Structure Of L3mbtl1 In Complex With H4k20me2 (Residues 17- 25), Trigonal Form Length = 323 Back     alignment and structure
>pdb|2RHI|A Chain A, Crystal Structure Of The 3-mbt Domain From Human L3mbtl1 In Complex With H1.5k27me2 At 1.66 Angstrom Length = 345 Back     alignment and structure
>pdb|2RHI|A Chain A, Crystal Structure Of The 3-mbt Domain From Human L3mbtl1 In Complex With H1.5k27me2 At 1.66 Angstrom Length = 345 Back     alignment and structure
>pdb|2RI3|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 With N358q Point Mutation Length = 319 Back     alignment and structure
>pdb|2RI3|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 With N358q Point Mutation Length = 319 Back     alignment and structure
>pdb|2RI5|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 With N358a Point Mutation Length = 319 Back     alignment and structure
>pdb|2RI5|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 With N358a Point Mutation Length = 319 Back     alignment and structure
>pdb|2RI2|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 With D355a Point Mutation Length = 319 Back     alignment and structure
>pdb|2RI2|A Chain A, Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 With D355a Point Mutation Length = 319 Back     alignment and structure
>pdb|1OYX|A Chain A, Crystal Structure Of 3-Mbt Repeats Of Lethal (3) Malignant Brain Tumor (Seleno-Met) At 1.85 Angstrom Length = 331 Back     alignment and structure
>pdb|1OYX|A Chain A, Crystal Structure Of 3-Mbt Repeats Of Lethal (3) Malignant Brain Tumor (Seleno-Met) At 1.85 Angstrom Length = 331 Back     alignment and structure
>pdb|2BIV|A Chain A, Crystal Structure Of The Wild-Type Mbt Domains Of Human Scml2 Length = 243 Back     alignment and structure
>pdb|1WJQ|A Chain A, Solution Structure Of The Third Mbt Domain From Human Kiaa1798 Protein Length = 107 Back     alignment and structure
>pdb|4EDU|A Chain A, The Mbt Repeats Of Human Scml2 In A Complex With Histone H2a Peptide Length = 215 Back     alignment and structure
>pdb|1OI1|A Chain A, Crystal Structure Of The Mbt Domains Of Human Scml2 Length = 221 Back     alignment and structure
>pdb|1WJS|A Chain A, Solution Structure Of The First Mbt Domain From Human Kiaa1798 Protein Length = 127 Back     alignment and structure
>pdb|2P0K|A Chain A, Crystal Structure Of Scmh1 Length = 212 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
3h6z_A447 Polycomb protein SFMBT; MBT, MBR repeat, aromatic 3e-48
3h6z_A447 Polycomb protein SFMBT; MBT, MBR repeat, aromatic 6e-47
3h6z_A 447 Polycomb protein SFMBT; MBT, MBR repeat, aromatic 1e-18
3f70_A456 Lethal(3)malignant brain tumor-like 2 protein; MBT 2e-47
3f70_A456 Lethal(3)malignant brain tumor-like 2 protein; MBT 2e-45
3f70_A 456 Lethal(3)malignant brain tumor-like 2 protein; MBT 1e-13
3feo_A437 MBT domain-containing protein 1; MBTL1, structural 2e-46
3feo_A437 MBT domain-containing protein 1; MBTL1, structural 1e-43
3feo_A437 MBT domain-containing protein 1; MBTL1, structural 2e-18
3feo_A 437 MBT domain-containing protein 1; MBTL1, structural 2e-12
3feo_A 437 MBT domain-containing protein 1; MBTL1, structural 8e-04
3ut1_A324 Lethal(3)malignant brain tumor-like protein 3; chr 9e-46
3ut1_A324 Lethal(3)malignant brain tumor-like protein 3; chr 2e-25
3ut1_A324 Lethal(3)malignant brain tumor-like protein 3; chr 5e-19
1oz2_A331 Lethal(3)malignant brain tumor-like protein; prope 2e-43
1oz2_A331 Lethal(3)malignant brain tumor-like protein; prope 9e-23
1oz2_A 331 Lethal(3)malignant brain tumor-like protein; prope 1e-05
2biv_A243 SCML2 protein, sex COMB on midleg-like protein 2; 1e-31
2biv_A243 SCML2 protein, sex COMB on midleg-like protein 2; 3e-17
2biv_A243 SCML2 protein, sex COMB on midleg-like protein 2; 1e-16
2biv_A243 SCML2 protein, sex COMB on midleg-like protein 2; 1e-13
2biv_A 243 SCML2 protein, sex COMB on midleg-like protein 2; 1e-05
2r58_A265 Polycomb protein SCM; MBT repeat, sex COMB on midl 7e-31
2r58_A265 Polycomb protein SCM; MBT repeat, sex COMB on midl 1e-18
2r58_A265 Polycomb protein SCM; MBT repeat, sex COMB on midl 3e-17
1wjq_A107 KIAA1798 protein; MBT domain, structural genomics, 9e-21
1wjq_A107 KIAA1798 protein; MBT domain, structural genomics, 8e-08
1wjq_A107 KIAA1798 protein; MBT domain, structural genomics, 7e-05
1wjr_A127 KIAA1617 protein; MBT domain, structural genomics, 1e-15
1wjr_A127 KIAA1617 protein; MBT domain, structural genomics, 1e-10
1wjr_A127 KIAA1617 protein; MBT domain, structural genomics, 2e-07
2w0t_A43 Lethal(3)malignant brain tumor-like 2 protein; zin 4e-10
1pk1_B89 Sex COMB on midleg CG9495-PA; hetero SAM domain, p 2e-04
1kw4_A89 Polyhomeotic; SAM domain, polycomb group, polymer, 4e-04
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster} Length = 447 Back     alignment and structure
 Score =  167 bits (425), Expect = 3e-48
 Identities = 78/354 (22%), Positives = 126/354 (35%), Gaps = 58/354 (16%)

Query: 1   MNLEVVDKKRISQVK-----------VATIEKIVGKRLQVHYY---DDDDGFCCHQDSPL 46
           M +EV +    S              VATI +I G +  + Y     D   F  +  +  
Sbjct: 41  MKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKALMSYEGFDTDSHDFWVNLCNAE 100

Query: 47  IHPVGWARRTGHLISAPPLYTDRC-------AKGIRDRDDATEDLFPLSVGTAGTKLSPG 99
           +H VGW    G  +  P     +           +        + +              
Sbjct: 101 VHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVGRLSGARTLPSNFY----------NKIN 150

Query: 100 TGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMML-----EELDEGMYYED----PT 150
                 F +G+ LE VD   +S + +ATV K+ G  +       +     + +     P 
Sbjct: 151 DSLQSRFRLGLNLECVDKDRISQVRLATVTKIVGDRLFLRYFDSDDGFWCHEDSPIIHPV 210

Query: 151 GMSKISNTATQP------AVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKD 204
           G +                + +      ++          +    + +           +
Sbjct: 211 GWATTVGHNLAAPQDYLERMLAGREAMIEVHEDDATIELFKMNFTFDEYYSDGKTNSFVE 270

Query: 205 GMAVCEKCGAMGVKHAFYTRERRFC--SLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHM 262
           GM    K  A+   +         C  ++  VL   +MMIR++SY  D +G  DWFCYH 
Sbjct: 271 GM----KLEAVDPLNLS-----SICPATVMAVLKFGYMMIRIDSYQPDASG-SDWFCYHE 320

Query: 263 SSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKING 316
            SP IF  GFC+ + I++TPP GY   TF+WE Y  DT ++ A   LF+  I  
Sbjct: 321 KSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLSDTGAVAAGQHLFHDIIPD 374
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster} Length = 447 Back     alignment and structure
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster} Length = 447 Back     alignment and structure
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A Length = 456 Back     alignment and structure
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A Length = 456 Back     alignment and structure
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A Length = 456 Back     alignment and structure
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens} Length = 437 Back     alignment and structure
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens} Length = 437 Back     alignment and structure
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens} Length = 437 Back     alignment and structure
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens} Length = 437 Back     alignment and structure
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens} Length = 437 Back     alignment and structure
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A Length = 324 Back     alignment and structure
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A Length = 324 Back     alignment and structure
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A Length = 324 Back     alignment and structure
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A* Length = 331 Back     alignment and structure
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A* Length = 331 Back     alignment and structure
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A* Length = 331 Back     alignment and structure
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A Length = 243 Back     alignment and structure
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A Length = 243 Back     alignment and structure
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A Length = 243 Back     alignment and structure
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A Length = 243 Back     alignment and structure
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A Length = 243 Back     alignment and structure
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A* Length = 265 Back     alignment and structure
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A* Length = 265 Back     alignment and structure
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A* Length = 265 Back     alignment and structure
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3 Length = 107 Back     alignment and structure
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3 Length = 107 Back     alignment and structure
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3 Length = 107 Back     alignment and structure
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3 Length = 127 Back     alignment and structure
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3 Length = 127 Back     alignment and structure
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3 Length = 127 Back     alignment and structure
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens} Length = 43 Back     alignment and structure
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A Length = 89 Back     alignment and structure
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A Length = 89 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
3h6z_A447 Polycomb protein SFMBT; MBT, MBR repeat, aromatic 100.0
3f70_A456 Lethal(3)malignant brain tumor-like 2 protein; MBT 100.0
3feo_A437 MBT domain-containing protein 1; MBTL1, structural 100.0
3ut1_A324 Lethal(3)malignant brain tumor-like protein 3; chr 100.0
1oz2_A331 Lethal(3)malignant brain tumor-like protein; prope 100.0
3feo_A437 MBT domain-containing protein 1; MBTL1, structural 100.0
3h6z_A447 Polycomb protein SFMBT; MBT, MBR repeat, aromatic 100.0
3f70_A456 Lethal(3)malignant brain tumor-like 2 protein; MBT 100.0
2biv_A243 SCML2 protein, sex COMB on midleg-like protein 2; 100.0
2biv_A243 SCML2 protein, sex COMB on midleg-like protein 2; 100.0
2r58_A265 Polycomb protein SCM; MBT repeat, sex COMB on midl 100.0
3ut1_A324 Lethal(3)malignant brain tumor-like protein 3; chr 100.0
1oz2_A331 Lethal(3)malignant brain tumor-like protein; prope 100.0
2r58_A265 Polycomb protein SCM; MBT repeat, sex COMB on midl 100.0
1wjr_A127 KIAA1617 protein; MBT domain, structural genomics, 99.97
1wjq_A107 KIAA1798 protein; MBT domain, structural genomics, 99.95
1wjr_A127 KIAA1617 protein; MBT domain, structural genomics, 99.94
1wjq_A107 KIAA1798 protein; MBT domain, structural genomics, 99.93
2eqm_A88 PHD finger protein 20-like 1; structural genomics, 99.74
3sd4_A69 PHD finger protein 20; tudor domain, transcription 99.7
2eqm_A88 PHD finger protein 20-like 1; structural genomics, 99.67
3sd4_A69 PHD finger protein 20; tudor domain, transcription 99.53
3h8z_A128 FragIle X mental retardation syndrome-related Pro; 96.79
3h8z_A128 FragIle X mental retardation syndrome-related Pro; 95.89
2w0t_A43 Lethal(3)malignant brain tumor-like 2 protein; zin 85.67
2f5k_A102 MORF-related gene 15 isoform 1; beta barrel, gene 82.58
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster} Back     alignment and structure
Probab=100.00  E-value=1.3e-88  Score=680.77  Aligned_cols=332  Identities=25%  Similarity=0.386  Sum_probs=283.4

Q ss_pred             CEEEEecC-----------CCCCCEEEEEEEEEeCCeEEEEEeC---CCCCEEEeCCCCCeeccchhhhcCccccCCCCC
Q psy6236           1 MNLEVVDK-----------KRISQVKVATIEKIVGKRLQVHYYD---DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLY   66 (358)
Q Consensus         1 MkLE~id~-----------~~~~~~~vAtV~~v~G~rl~l~~~~---~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y   66 (358)
                      ||||++|+           .++..+|||||+++||+||||||+|   +++|||||++|++|||||||++||+.|+||.++
T Consensus        41 MklEv~~~~~~~~~~~~~~~~p~~~WvAtV~~~~G~rLlLry~G~~~d~~DFW~~~~S~~ihPvGWc~~~g~~L~PP~~i  120 (447)
T 3h6z_A           41 MKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKALMSYEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTI  120 (447)
T ss_dssp             CEEEEC----------------CCBEEEEEEEEETTEEEEEETTCSSGGGCEEEETTTSSCBCTTHHHHHTCCBCCCGGG
T ss_pred             CEEEEecCCcccccccccccCCCcEEEEEEhhhcccEEEEEEccCCCCCCCccccCCCCceecCchHhhcCceecCCccc
Confidence            99999873           4788999999999999999999986   458999999999999999999999999999999


Q ss_pred             Cccccccc-------cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEe
Q psy6236          67 TDRCAKGI-------RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEE  139 (358)
Q Consensus        67 ~~~~~~~~-------~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~  139 (358)
                      .++.++|.       .++..+|.++|++...          ...+.|++||||||+|++|+.+||||||++|+|+|++++
T Consensus       121 ~~~~~dW~~~L~~~l~ga~~~P~~lf~~~~~----------~~~~~F~~GmkLE~vD~~~~~~i~vAtV~~v~g~rl~l~  190 (447)
T 3h6z_A          121 EHKYKDWKDFLVGRLSGARTLPSNFYNKIND----------SLQSRFRLGLNLECVDKDRISQVRLATVTKIVGDRLFLR  190 (447)
T ss_dssp             GGGCSCCHHHHHHHHTTCCCSCTTHHHHHHH----------HTSCSSCTTCEEEEECTTCTTEEEEEEEEEEETTEEEEE
T ss_pred             cccccCHHHHHHHHhcCCcCCCHHHhhhccc----------ccccccCCCCEEEEEcCCCCccEEEEEEEEEECCcEEEE
Confidence            88877773       4667788888865321          135789999999999999999999999999999999998


Q ss_pred             e-----cceeeccCC----CCccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCc----
Q psy6236         140 L-----DEGMYYEDP----TGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGM----  206 (358)
Q Consensus       140 ~-----d~w~~~~sp----~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~----  206 (358)
                      +     |.|+++.||    +|||+++|+.|+||..        +...  ....|+.++...  ...-+..+|++..    
T Consensus       191 ~~d~~~dfwc~~~Sp~I~PVGW~~~~g~~L~pP~~--------y~~~--~~~~~~~ll~~~--~~~ap~~LF~~~~~~~~  258 (447)
T 3h6z_A          191 YFDSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQD--------YLER--MLAGREAMIEVH--EDDATIELFKMNFTFDE  258 (447)
T ss_dssp             ETTCSCEEEEETTCTTEECTTHHHHHTCEEECCHH--------HHHH--HHTTTTTCCCCC--TTBCCGGGSCCSSCTHH
T ss_pred             EECCCCCEEEeCCCCCccccchHHhcCccccCChh--------hhcc--chhHHHHHHhhc--ccCCCHHHccCcccccc
Confidence            8     479999996    8999999999999932        2211  111233333211  1112333677653    


Q ss_pred             ---cccccCceecccccccccCCc----eeeeeEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCC
Q psy6236         207 ---AVCEKCGAMGVKHAFYTRERR----FCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGIN  279 (358)
Q Consensus       207 ---~~~~~~~~~Gmk~~~~~~~~~----~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~  279 (358)
                         ....|.|++|||+|++|+.+.    +|||++|++++||+|+|||++++.+ ..|+||+|++|++|||||||++||++
T Consensus       259 ~~~~~~~~~F~~GMKLEavDp~~~~~icvATV~~V~~~~~~~v~~Dg~~~~~~-~~d~f~~~~~S~~I~PvGwce~ng~~  337 (447)
T 3h6z_A          259 YYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDAS-GSDWFCYHEKSPCIFPAGFCSVNNIS  337 (447)
T ss_dssp             HHTSCCCCCCCTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEETTSCTTCT-TTTCEEEETTCTTEECTTHHHHTTCC
T ss_pred             ccccccccccccccEEEeeccCCCCcEEEEEEEEeccCCEEEEEECCCCcccC-CCccEEEeCCCCCcCccchHHhcCcc
Confidence               467899999999999999997    6999999999999999999976433 57889899999999999999999999


Q ss_pred             CCCCCCCcccccCHhHHHhhcCCCCCCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236         280 LTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP  355 (358)
Q Consensus       280 L~pP~gy~~~~F~W~~YL~~~~a~~aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~  355 (358)
                      |+||+||..+.|+|++||+++++++||.+||++..+.++|++||||||||++||.+||||||++|.|++|+||||-
T Consensus       338 L~pP~gy~~~~f~W~~yl~~~~a~~aP~~lF~~~~~~~~F~~gmkLEAvD~~np~~icvATV~~v~~~~~~i~fDg  413 (447)
T 3h6z_A          338 VTPPNGYDSRTFTWEGYLSDTGAVAAGQHLFHDIIPDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDG  413 (447)
T ss_dssp             CCCCTTCCTTTCCHHHHHHHHTCCBCCGGGSCCCCCCCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEECTT
T ss_pred             CCCCCCccccCCcHHHHHHhhCCCcCcHHHcCCCCCCCccccCCEEEeecCCCCCcEEEEEEeEecCCEEEEEeCC
Confidence            9999999999999999999999999999999998788999999999999999999999999999999999999995
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A Back     alignment and structure
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens} Back     alignment and structure
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A Back     alignment and structure
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A* Back     alignment and structure
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens} Back     alignment and structure
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster} Back     alignment and structure
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A Back     alignment and structure
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A Back     alignment and structure
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A Back     alignment and structure
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A* Back     alignment and structure
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A Back     alignment and structure
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A* Back     alignment and structure
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A* Back     alignment and structure
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3 Back     alignment and structure
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3 Back     alignment and structure
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3 Back     alignment and structure
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3 Back     alignment and structure
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A Back     alignment and structure
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A Back     alignment and structure
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A Back     alignment and structure
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A Back     alignment and structure
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N* Back     alignment and structure
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N* Back     alignment and structure
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens} Back     alignment and structure
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 358
d1oz2a3106 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumo 1e-21
d1oz2a3106 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumo 5e-10
d1oz2a3106 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumo 2e-08
d1oz2a3106 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumo 4e-04
d1oz2a1110 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumo 6e-21
d1oz2a1110 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumo 1e-09
d1oz2a1110 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumo 2e-09
d1oz2a1110 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumo 8e-04
d1oi1a2104 b.34.9.3 (A:140-243) Scml2 protein {Human (Homo sa 9e-21
d1oi1a2104 b.34.9.3 (A:140-243) Scml2 protein {Human (Homo sa 7e-10
d1oi1a2104 b.34.9.3 (A:140-243) Scml2 protein {Human (Homo sa 6e-09
d1wjqa_107 b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 1e-20
d1wjqa_107 b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 2e-09
d1wjqa_107 b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 5e-09
d1oi1a1103 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sap 4e-20
d1oi1a1103 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sap 1e-09
d1oi1a1103 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sap 4e-09
d1oi1a1103 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sap 5e-04
d1oz2a2108 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumo 5e-20
d1oz2a2108 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumo 9e-09
d1oz2a2108 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumo 3e-07
d1oz2a2108 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumo 6e-04
d1wjra_127 b.34.9.3 (A:) Scm-like with four MBT domains prote 9e-20
d1wjra_127 b.34.9.3 (A:) Scm-like with four MBT domains prote 3e-17
d1wjra_127 b.34.9.3 (A:) Scm-like with four MBT domains prote 1e-08
d1wjsa_127 b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 1e-19
d1wjsa_127 b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3e-19
d1wjsa_127 b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 5e-09
>d1oz2a3 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure

class: All beta proteins
fold: SH3-like barrel
superfamily: Tudor/PWWP/MBT
family: MBT repeat
domain: Lethal(3)malignant brain tumor-like protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (214), Expect = 1e-21
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 1   MNLEVVDKKRISQVKVATIEKIVGKRLQVHY--YDDDDGFCCHQDSPLIHPVGWARRTGH 58
           M LE VD++  + ++VA++E +   R+++H+  +     F    D P IHP GW  +TGH
Sbjct: 32  MKLEAVDRRNPALIRVASVEDVEDHRIKIHFDGWSHGYDFWIDADHPDIHPAGWCSKTGH 91

Query: 59  LISAPPLYTD 68
            +  P    +
Sbjct: 92  PLQPPLGPRE 101
>d1oz2a3 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1oz2a3 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1oz2a3 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1oz2a1 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 110 Back     information, alignment and structure
>d1oz2a1 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 110 Back     information, alignment and structure
>d1oz2a1 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 110 Back     information, alignment and structure
>d1oz2a1 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 110 Back     information, alignment and structure
>d1oi1a2 b.34.9.3 (A:140-243) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1oi1a2 b.34.9.3 (A:140-243) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1oi1a2 b.34.9.3 (A:140-243) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1wjqa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1wjqa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1wjqa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1oi1a1 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 103 Back     information, alignment and structure
>d1oi1a1 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 103 Back     information, alignment and structure
>d1oi1a1 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 103 Back     information, alignment and structure
>d1oi1a1 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 103 Back     information, alignment and structure
>d1oz2a2 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 108 Back     information, alignment and structure
>d1oz2a2 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 108 Back     information, alignment and structure
>d1oz2a2 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 108 Back     information, alignment and structure
>d1oz2a2 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Length = 108 Back     information, alignment and structure
>d1wjra_ b.34.9.3 (A:) Scm-like with four MBT domains protein 2, SFMBT2 (KIAA1617) {Human (Homo sapiens) [TaxId: 9606]} Length = 127 Back     information, alignment and structure
>d1wjra_ b.34.9.3 (A:) Scm-like with four MBT domains protein 2, SFMBT2 (KIAA1617) {Human (Homo sapiens) [TaxId: 9606]} Length = 127 Back     information, alignment and structure
>d1wjra_ b.34.9.3 (A:) Scm-like with four MBT domains protein 2, SFMBT2 (KIAA1617) {Human (Homo sapiens) [TaxId: 9606]} Length = 127 Back     information, alignment and structure
>d1wjsa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]} Length = 127 Back     information, alignment and structure
>d1wjsa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]} Length = 127 Back     information, alignment and structure
>d1wjsa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]} Length = 127 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
d1wjsa_127 Lethal(3)malignant brain tumor-like 3 protein, L3M 100.0
d1wjra_127 Scm-like with four MBT domains protein 2, SFMBT2 ( 99.98
d1oz2a3106 Lethal(3)malignant brain tumor-like protein {Human 99.96
d1oi1a1103 Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} 99.96
d1oz2a2108 Lethal(3)malignant brain tumor-like protein {Human 99.96
d1oi1a2104 Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} 99.95
d1wjsa_127 Lethal(3)malignant brain tumor-like 3 protein, L3M 99.95
d1oz2a1110 Lethal(3)malignant brain tumor-like protein {Human 99.95
d1wjra_127 Scm-like with four MBT domains protein 2, SFMBT2 ( 99.93
d1oz2a3106 Lethal(3)malignant brain tumor-like protein {Human 99.93
d1wjqa_107 Lethal(3)malignant brain tumor-like 3 protein, L3M 99.93
d1oz2a2108 Lethal(3)malignant brain tumor-like protein {Human 99.93
d1oi1a1103 Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} 99.93
d1oz2a1110 Lethal(3)malignant brain tumor-like protein {Human 99.92
d1oi1a2104 Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} 99.92
d1wjqa_107 Lethal(3)malignant brain tumor-like 3 protein, L3M 99.92
>d1wjsa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: SH3-like barrel
superfamily: Tudor/PWWP/MBT
family: MBT repeat
domain: Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-35  Score=247.85  Aligned_cols=110  Identities=34%  Similarity=0.671  Sum_probs=96.6

Q ss_pred             CCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCccccCCCCcCCCccCCCCCCCccccCCCCC
Q psy6236         102 QTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPG  181 (358)
Q Consensus       102 ~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~  181 (358)
                      +.|+|++||||||+|++++..||||||+++.|+|                                              
T Consensus        10 ~~~~F~~GmKLEavd~~~~~~i~vAtV~~v~g~~----------------------------------------------   43 (127)
T d1wjsa_          10 NKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYR----------------------------------------------   43 (127)
T ss_dssp             CCCSCCTTCEEEEEETTEEEEEEEEEEEEEETTE----------------------------------------------
T ss_pred             CCCCCccCCEEEEEcCCCCceEEEEEEEEEECCE----------------------------------------------
Confidence            4689999999999999999999999999975544                                              


Q ss_pred             CcCccccccccCCCCCccccccCCccccccCceecccccccccCCceeeeeEeecCceEEEEEcCCCCCCCCCcceEEEe
Q psy6236         182 LKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYH  261 (358)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h  261 (358)
                                                                                |+|+|||+++    .+|+|| |
T Consensus        44 ----------------------------------------------------------l~v~~DG~~~----~~dfw~-~   60 (127)
T d1wjsa_          44 ----------------------------------------------------------IKLHFDGYSD----CYDFWV-N   60 (127)
T ss_dssp             ----------------------------------------------------------EEEEETTSCG----GGCEEE-E
T ss_pred             ----------------------------------------------------------EEEEeCCCCC----CCCEEE-E
Confidence                                                                      6677777764    468887 9


Q ss_pred             cCCCCcccchhhhhcCCCCCCCCCCcccccCHhHHHhhcCCCCCCccccCCCC---CCCCCC
Q psy6236         262 MSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKI---NGEALL  320 (358)
Q Consensus       262 ~~Sp~I~PvGwc~~~g~~L~pP~gy~~~~F~W~~YL~~~~a~~aP~~~F~~~~---~~~~F~  320 (358)
                      .+|++|||||||++||++|+||+||....|+|.+||+++++++||.++|++..   ..++|-
T Consensus        61 ~~S~~I~PvGWc~~~g~~L~pP~g~~~~~f~W~~YL~~~~a~~aP~~lF~~~~~~~~p~~f~  122 (127)
T d1wjsa_          61 ADALDIHPVGWCEKTGHKLHPPKGYKEEEFNWQTYLKTCKAQAAPKSLFENQNITVIPSGFS  122 (127)
T ss_dssp             TTCSSCBCSSCHHHHTCCCBCCTTCCTTTCCHHHHHHHTTCCCCCGGGGTTSCCCCCCSSCC
T ss_pred             CCCCCeecCchHHHcCcccccCCCCCCCCCCHHHHHHHhCcccCcHHHHhcCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999998752   235553
>d1wjra_ b.34.9.3 (A:) Scm-like with four MBT domains protein 2, SFMBT2 (KIAA1617) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oz2a3 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oi1a1 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oz2a2 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oi1a2 b.34.9.3 (A:140-243) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wjsa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oz2a1 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wjra_ b.34.9.3 (A:) Scm-like with four MBT domains protein 2, SFMBT2 (KIAA1617) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oz2a3 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wjqa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oz2a2 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oi1a1 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oz2a1 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oi1a2 b.34.9.3 (A:140-243) Scml2 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wjqa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure