Diaphorina citri psyllid: psy6288


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
MNISQVLNYVTHVIFDMDGLLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYGLPPFEDK
ccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccccccccEEEEccccccccccccccHHHHHHHHHcccccccccEEEEEcccHHHHHHHHcccEEEEEccccccccccccccEEEccccccccccccccccccc
*NISQVLNYVTHVIFDMDGLLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYGLPPFE**
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MNISQVLNYVTHVIFDMDGLLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYGLPPFEDK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable pseudouridine-5'-monophosphatase Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation.confidentQ94529
Pseudouridine-5'-monophosphatase Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine.confidentQ9D5U5

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0042060 [BP]wound healingprobableGO:0050896, GO:0006950, GO:0008150, GO:0009611
GO:0016791 [MF]phosphatase activityprobableGO:0042578, GO:0016787, GO:0003674, GO:0016788, GO:0003824
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0000287 [MF]magnesium ion bindingprobableGO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0044237 [BP]cellular metabolic processprobableGO:0009987, GO:0008150, GO:0008152

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3L5K, chain A
Confidence level:very confident
Coverage over the Query: 20-164
View the alignment between query and template
View the model in PyMOL