Diaphorina citri psyllid: psy6341


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-----
MKWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGRGRPKKRWKDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVRNKVWKQPKLSRNDTLIFVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAPRTPSTEPKKNTTPPGIEPGPPACKPSVIPTTCKGTRFGSGVPCWHPPPNSMRCAIPRRHMRSMDLAFVDTTLCLVQ
cHHHHHHHHHccccccccHHHHHHHHHHHccEEccccHHHHHHHHccccccccCEEECcccccccccccccCEECcccccccccccccccccccccccHHHHHHHHHcccccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccEEEEEECcccCCccccccccccccccccccccccccccccccccccccccccccccccEEHHHHHHHHHHHcccccccccccccEEEEEcccccccccHHHHHHcccccccccHHHHHHHHHHcccEEEcccHHHHHHHHHccccccccECccccEEEEcccEEEEccccccccccccccccccccHHHHHcccccCCccccccccHHHHccccccccccccccccCECcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccEEEEc
MKWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYD*********LFYSPTSWKKSPSDRPSIPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGRGR***R*KDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVRNKVWKQPKLSRNDTLIFVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAPRTPSTEPKKNTTPPGIEPGPPACKPSVIPTTCKGTRFGSGVPCWHPPPNSMRCAIPRRHMRSMDLAFVDTTLCLVQ
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MKWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGRGRPKKRWKDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVRNKVWKQPKLSRNDTLIFVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAPRTPSTEPKKNTTPPGIEPGPPACKPSVIPTTCKGTRFGSGVPCWHPPPNSMRCAIPRRHMRSMDLAFVDTTLCLVQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Actin-related protein 3 Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament.confidentQ5R8R1
Actin-related protein 3 Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament. Plays a role in ciliogenesis.confidentQ99JY9
Actin-related protein 3 Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament. Plays a role in ciliogenesis.confidentP61157

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0051491 [BP]positive regulation of filopodium assemblyprobableGO:0051130, GO:0051489, GO:0051128, GO:0050789, GO:0044087, GO:0060491, GO:0065007, GO:0048518, GO:0008150, GO:0031346, GO:0031344, GO:0050794, GO:0048522
GO:0030056 [CC]hemidesmosomeprobableGO:0005575, GO:0030054, GO:0030055
GO:0000139 [CC]Golgi membraneprobableGO:0005737, GO:0005794, GO:0031090, GO:0043229, GO:0016020, GO:0044464, GO:0044444, GO:0005623, GO:0005622, GO:0044446, GO:0044431, GO:0012505, GO:0005575, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0048858 [BP]cell projection morphogenesisprobableGO:0032502, GO:0048856, GO:0000902, GO:0030030, GO:0048869, GO:0009987, GO:0016043, GO:0032989, GO:0044767, GO:0044763, GO:0071840, GO:0008150, GO:0009653, GO:0044699, GO:0032990
GO:0060076 [CC]excitatory synapseprobableGO:0005575, GO:0045202
GO:0010592 [BP]positive regulation of lamellipodium assemblyprobableGO:0010591, GO:0051130, GO:0051128, GO:0050789, GO:0044087, GO:0060491, GO:0065007, GO:0048518, GO:0008150, GO:0031346, GO:0031344, GO:0050794, GO:0048522
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0030027 [CC]lamellipodiumprobableGO:0005575, GO:0042995, GO:0044464, GO:0031252, GO:0005623
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0002102 [CC]podosomeprobableGO:0043234, GO:0005856, GO:0032991, GO:0015629, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0005575, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0051179 [BP]localizationprobableGO:0008150
GO:0030864 [CC]cortical actin cytoskeletonprobableGO:0005856, GO:0005737, GO:0043228, GO:0015629, GO:0043232, GO:0030863, GO:0044444, GO:0071944, GO:0044422, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0005938, GO:0005575, GO:0044424, GO:0044464, GO:0043226, GO:0044448
GO:0034314 [BP]Arp2/3 complex-mediated actin nucleationprobableGO:0033043, GO:0043933, GO:0030036, GO:0051128, GO:0008064, GO:0071840, GO:0050789, GO:0044699, GO:0030832, GO:0030833, GO:0071822, GO:0030838, GO:0051495, GO:0051493, GO:0016043, GO:0090066, GO:0065007, GO:0032271, GO:0032273, GO:0048518, GO:0065008, GO:0051130, GO:0032970, GO:0030029, GO:0009987, GO:0031334, GO:0050794, GO:0044763, GO:0032956, GO:0043254, GO:0006996, GO:0007015, GO:0007010, GO:0045010, GO:0010638, GO:0044087, GO:0008150, GO:0032535, GO:0048522
GO:0005885 [CC]Arp2/3 protein complexprobableGO:0043234, GO:0005856, GO:0032991, GO:0015629, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0005575, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0005884 [CC]actin filamentprobableGO:0043234, GO:0005856, GO:0032991, GO:0015629, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0005575, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0048699 [BP]generation of neuronsprobableGO:0032502, GO:0048856, GO:0044707, GO:0007399, GO:0009987, GO:0048869, GO:0030154, GO:0008150, GO:0032501, GO:0044763, GO:0048731, GO:0022008, GO:0007275, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1K8K, chain A
Confidence level:very confident
Coverage over the Query: 2-203
View the alignment between query and template
View the model in PyMOL
Template: 1K8K, chain A
Confidence level:very confident
Coverage over the Query: 212-361,372-389
View the alignment between query and template
View the model in PyMOL