Psyllid ID: psy6341

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-----
MKWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGRGRPKKRWKDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVRNKVWKQPKLSRNDTLIFVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAPRTPSTEPKKNTTPPGIEPGPPACKPSVIPTTCKGTRFGSGVPCWHPPPNSMRCAIPRRHMRSMDLAFVDTTLCLVQ
cHHHHHHHHHccccccccHHHHHHHHHHHccEEccccHHHHHHHHccccccccEEEEEcccccccccccccEEEEccccccccccccccccccccccHHHHHHHHHHcccccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccEEEEEEEcccEEccccccccccccccccccccccccccccccccccccccccccccccEEHHHHHHHHHHHcccccccccccccEEEEEcccccccccHHHHHHcccccccccHHHHHHHHHHcccEEEcccHHHHHHHHHccccccccEEccccEEEEcccEEEEccccccccccccccccccccHHHHHcccccEEcccccccHHHHHHcccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccEEEEc
cHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcccEcccccEEEEcccccccHHHHccccHccccccHHccccHHHHHHHHHHccccHHHHHHHHEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccEEEEEEcccccccccHHcHHHHHHHHccccHccccccccHHHHHHHHHHHHHcccccEEEEEEHHHHHHHHcccccEEccccccEEEEEEccccEEEEEEEEEHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHEEcccccEEEEccHHHccccHHHHHHHHHHHHHcccccHHHHccccHHcccccccccccHHHcEcccccccccccccccccccccccccccccccEEEccccccEEccccccccccccccccEcccHHccccccEEEEccEEEEcc
MKWILSLLRereigippeqsLETAKAIKERYSYICPDIAKEFakydadpgkwmrnlfysptswkkspsdrpsipfftqnfqfksflfsfsnpdfttpiSEIVDTViqncpidvrrplyhnivlsggstmfRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGrrlhwyghverrdesyigkRVERMEvrgrkgrgrpkkrwkdCVNQDLEIMFESFNVPGLYIAVQAVLALAASwksrpieertltgivvdsgdgvthviPVSLlrereigippeqsLETAKAIKERYSYICPDIAKEFAKYVRNKvwkqpklsrndtlifVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFakydadpgkwmrnsysivltrpsaprtpstepkknttppgiepgppackpsvipttckgtrfgsgvpcwhpppnsmrcaiprrhmrsmdlAFVDTTLCLVQ
MKWILSLlrereigippeqslETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARlklsetlsggyikvtevsrkfqgrrlhwyghverrdesyigkrvermevrgrkgrgrpkkrwkdcVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLtgivvdsgdgvTHVIPVSllrereigippeqsLETAKAIKERYSYICPDIAKEFAKYVRNKvwkqpklsrndtlifvpillrslpkqSLETAKAIKERYSYICPDIAKEFakydadpgkWMRNSYSIVltrpsaprtpstepkknttppgiepgppaCKPSVIPTTCKGTRFgsgvpcwhpppNSMRCAIPRRHMRSMDLAFVDTTLCLVQ
MKWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVrgrkgrgrpkkrWKDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVRNKVWKQPKLSRNDTLIFVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAPRTPSTEPKKNTTPPGIEPGPPACKPSVIPTTCKGTRFGSGVPCWHPPPNSMRCAIPRRHMRSMDLAFVDTTLCLVQ
**WILSLLREREIGI*******TAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSW*********IPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGK******************RWKDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVRNKVWKQPKLSRNDTLIFVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVL********************************VIPTTCKGTRFGSGVPCWHPPPNSMRCAIPRRHMRSMDLAFVDTTLCL**
MKWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFA************LFYSPTSWKKSPSDRPSIPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLK**E***GGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGRGR***R**DCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAK**********KLSRNDTLIFVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAPRTPSTEPKKNTTPPGIEPGPPACKPSVIPTTCKGTRFGSGVPCWHPP************MRSMDLAFVDTTLCLVQ
MKWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPT********RPSIPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEV*************KDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVRNKVWKQPKLSRNDTLIFVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTR******************GIEPGPPACKPSVIPTTCKGTRFGSGVPCWHPPPNSMRCAIPRRHMRSMDLAFVDTTLCLVQ
MKWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYD***********YSPTSWKKSPSDRPSIPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGRGRPKKRWKDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVRNKVWKQPKLSRNDTLIFVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAPRTPSTEPKKNTTPPGIEPGPPACKPSVIPTTCKGTRFGSGVPCWHPPPNSMRCAIPRRHMRSMDLAFVDTTLCLVQ
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MKWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGRGRPKKRWKDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVRNKVWKQPKLSRNDTLIFVPILLRSLPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAPRTPSTEPKKNTTPPGIEPGPPACKPSVIPTTCKGTRFGSGVPCWHPPPNSMRCAIPRRHMRSMDLAFVDTTLCLVQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query465 2.2.26 [Sep-21-2011]
P32392418 Actin-related protein 3 O yes N/A 0.356 0.397 0.617 5e-55
Q5R8R1418 Actin-related protein 3 O yes N/A 0.367 0.409 0.601 2e-52
P61158418 Actin-related protein 3 O yes N/A 0.367 0.409 0.601 2e-52
P61157418 Actin-related protein 3 O yes N/A 0.367 0.409 0.601 2e-52
Q4V7C7418 Actin-related protein 3 O no N/A 0.367 0.409 0.601 2e-52
Q99JY9418 Actin-related protein 3 O yes N/A 0.367 0.409 0.601 2e-52
Q90WD0418 Actin-related protein 3 O yes N/A 0.356 0.397 0.590 3e-52
Q9P1U1418 Actin-related protein 3B no N/A 0.367 0.409 0.606 6e-52
O73723418 Actin-related protein 3 O N/A N/A 0.350 0.389 0.589 9e-52
Q641P0418 Actin-related protein 3B no N/A 0.367 0.409 0.595 7e-51
>sp|P32392|ARP3_DROME Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=2 SV=3 Back     alignment and function desciption
 Score =  215 bits (548), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 116/188 (61%), Positives = 135/188 (71%), Gaps = 22/188 (11%)

Query: 3   WILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTS 62
           +I SLLRERE+GIPPEQSLETAKAIKE++ YICPDIAKEFAKYD +PGKW+RN F    +
Sbjct: 203 FIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRN-FSGVNT 261

Query: 63  WKKSPSDRPSIPFFTQNFQFKSFLF-------SFSNPDFTTPISEIVDTVIQNCPIDVRR 115
             K+P        F  +  ++ FL         FSNPDFT P+SEIVD VIQNCPIDVRR
Sbjct: 262 VTKAP--------FNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRR 313

Query: 116 PLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIK-----VTEVSRKFQ 170
           PLY+NIVLSGGSTMF+DFGRRLQRDIKR VD RL++SE LS G IK     V  ++   Q
Sbjct: 314 PLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQ 373

Query: 171 GRRLHWYG 178
            R   W+G
Sbjct: 374 -RYAVWFG 380
Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament.
Drosophila melanogaster (taxid: 7227)
>sp|Q5R8R1|ARP3_PONAB Actin-related protein 3 OS=Pongo abelii GN=ACTR3 PE=2 SV=3 Back     alignment and function description
>sp|P61158|ARP3_HUMAN Actin-related protein 3 OS=Homo sapiens GN=ACTR3 PE=1 SV=3 Back     alignment and function description
>sp|P61157|ARP3_BOVIN Actin-related protein 3 OS=Bos taurus GN=ACTR3 PE=1 SV=3 Back     alignment and function description
>sp|Q4V7C7|ARP3_RAT Actin-related protein 3 OS=Rattus norvegicus GN=Actr3 PE=1 SV=1 Back     alignment and function description
>sp|Q99JY9|ARP3_MOUSE Actin-related protein 3 OS=Mus musculus GN=Actr3 PE=1 SV=3 Back     alignment and function description
>sp|Q90WD0|ARP3_CHICK Actin-related protein 3 OS=Gallus gallus GN=ACTR3 PE=2 SV=1 Back     alignment and function description
>sp|Q9P1U1|ARP3B_HUMAN Actin-related protein 3B OS=Homo sapiens GN=ACTR3B PE=2 SV=1 Back     alignment and function description
>sp|O73723|ARP3_TAKRU Actin-related protein 3 OS=Takifugu rubripes GN=actr3 PE=3 SV=1 Back     alignment and function description
>sp|Q641P0|ARP3B_MOUSE Actin-related protein 3B OS=Mus musculus GN=Actr3b PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query465
388523591416 actin, partial [Cryptocercus punctulatus 0.356 0.399 0.659 2e-56
31210041418 AGAP005110-PA [Anopheles gambiae str. PE 0.356 0.397 0.654 6e-56
242023849418 conserved hypothetical protein [Pediculu 0.356 0.397 0.654 1e-55
321477728420 hypothetical protein DAPPUDRAFT_304740 [ 0.356 0.395 0.654 1e-55
157132019418 actin [Aedes aegypti] gi|108871296|gb|EA 0.356 0.397 0.643 2e-55
170060331418 actin [Culex quinquefasciatus] gi|167878 0.356 0.397 0.643 2e-55
170062922418 actin [Culex quinquefasciatus] gi|167880 0.356 0.397 0.643 3e-55
332373344419 unknown [Dendroctonus ponderosae] 0.356 0.396 0.638 7e-55
91078924418 PREDICTED: similar to actin [Tribolium c 0.356 0.397 0.638 9e-55
193579956418 PREDICTED: actin-related protein 3-like 0.359 0.399 0.641 1e-54
>gi|388523591|gb|AFK49794.1| actin, partial [Cryptocercus punctulatus] Back     alignment and taxonomy information
 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/188 (65%), Positives = 138/188 (73%), Gaps = 22/188 (11%)

Query: 3   WILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTS 62
           +I SLLREREIGIPPEQSLETAKAIKER+ YICPDIAKEFAKYD+D  KWM+  +    S
Sbjct: 201 FIQSLLREREIGIPPEQSLETAKAIKERFCYICPDIAKEFAKYDSDSSKWMKK-YEGVNS 259

Query: 63  WKKSPSDRPSIPFFTQNFQFKSFLF-------SFSNPDFTTPISEIVDTVIQNCPIDVRR 115
             K+P        F  +  ++ FL         FSNPDFTTP+SEIVDTVIQNCPIDVRR
Sbjct: 260 VTKTP--------FVVDVGYERFLGPEIFFHPEFSNPDFTTPLSEIVDTVIQNCPIDVRR 311

Query: 116 PLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIK-----VTEVSRKFQ 170
           PLY+NIVLSGGSTMFRDFGRRLQRDIKR VDARL+LSETLSGG IK     V  +S   Q
Sbjct: 312 PLYNNIVLSGGSTMFRDFGRRLQRDIKRTVDARLRLSETLSGGRIKPKPIDVQVISHHMQ 371

Query: 171 GRRLHWYG 178
            R   W+G
Sbjct: 372 -RYAVWFG 378

Source: Cryptocercus punctulatus

Species: Cryptocercus punctulatus

Genus: Cryptocercus

Family: Cryptocercidae

Order: Blattodea

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|31210041|ref|XP_313987.1| AGAP005110-PA [Anopheles gambiae str. PEST] gi|30176644|gb|EAA09440.2| AGAP005110-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|242023849|ref|XP_002432343.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212517766|gb|EEB19605.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|321477728|gb|EFX88686.1| hypothetical protein DAPPUDRAFT_304740 [Daphnia pulex] Back     alignment and taxonomy information
>gi|157132019|ref|XP_001662409.1| actin [Aedes aegypti] gi|108871296|gb|EAT35521.1| AAEL012310-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|170060331|ref|XP_001865755.1| actin [Culex quinquefasciatus] gi|167878819|gb|EDS42202.1| actin [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|170062922|ref|XP_001866879.1| actin [Culex quinquefasciatus] gi|167880727|gb|EDS44110.1| actin [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|332373344|gb|AEE61813.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|91078924|ref|XP_973781.1| PREDICTED: similar to actin [Tribolium castaneum] gi|270003694|gb|EFA00142.1| hypothetical protein TcasGA2_TC002963 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|193579956|ref|XP_001951746.1| PREDICTED: actin-related protein 3-like [Acyrthosiphon pisum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query465
FB|FBgn0262716418 Arp3 "Actin-related protein 3" 0.367 0.409 0.628 2.7e-52
ZFIN|ZDB-GENE-070424-10425 actr3b "ARP3 actin-related pro 0.367 0.402 0.617 5.1e-51
UNIPROTKB|F1N049384 ACTR3 "Actin-related protein 3 0.367 0.445 0.606 5.8e-50
UNIPROTKB|P61157418 ACTR3 "Actin-related protein 3 0.367 0.409 0.606 5.8e-50
UNIPROTKB|F1P679419 ACTR3B "Uncharacterized protei 0.367 0.408 0.606 5.8e-50
UNIPROTKB|J9PAK3367 ACTR3B "Uncharacterized protei 0.367 0.465 0.606 5.8e-50
UNIPROTKB|B4DXW1367 ACTR3 "cDNA, FLJ79295, highly 0.367 0.465 0.606 5.8e-50
UNIPROTKB|F5H3P5356 ACTR3 "Actin-related protein 3 0.367 0.480 0.606 5.8e-50
UNIPROTKB|P61158418 ACTR3 "Actin-related protein 3 0.367 0.409 0.606 5.8e-50
UNIPROTKB|F2Z5D2418 ACTR3 "Uncharacterized protein 0.367 0.409 0.606 5.8e-50
FB|FBgn0262716 Arp3 "Actin-related protein 3" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 115/183 (62%), Positives = 134/183 (73%)

Query:     3 WILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTS 62
             +I SLLRERE+GIPPEQSLETAKAIKE++ YICPDIAKEFAKYD +PGKW+RN F    +
Sbjct:   203 FIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRN-FSGVNT 261

Query:    63 WKKSPSDRPSIPFFTQNFQFKSFLF--SFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHN 120
               K+P +   +    + F      F   FSNPDFT P+SEIVD VIQNCPIDVRRPLY+N
Sbjct:   262 VTKAPFN---VDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNN 318

Query:   121 IVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIK-----VTEVSRKFQGRRLH 175
             IVLSGGSTMF+DFGRRLQRDIKR VD RL++SE LS G IK     V  ++   Q R   
Sbjct:   319 IVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQ-RYAV 377

Query:   176 WYG 178
             W+G
Sbjct:   378 WFG 380
GO:0005884 "actin filament" evidence=ISS
GO:0003779 "actin binding" evidence=ISS
GO:0007010 "cytoskeleton organization" evidence=ISS
GO:0005885 "Arp2/3 protein complex" evidence=ISS;NAS
GO:0005200 "structural constituent of cytoskeleton" evidence=ISS
GO:0034314 "Arp2/3 complex-mediated actin nucleation" evidence=ISS
GO:0007413 "axonal fasciculation" evidence=IMP
GO:0030037 "actin filament reorganization involved in cell cycle" evidence=IPI
GO:0030589 "pseudocleavage involved in syncytial blastoderm formation" evidence=IPI
GO:0015629 "actin cytoskeleton" evidence=NAS
GO:0008064 "regulation of actin polymerization or depolymerization" evidence=NAS
GO:0005524 "ATP binding" evidence=IEA
GO:0006911 "phagocytosis, engulfment" evidence=IMP
GO:0030027 "lamellipodium" evidence=IDA
GO:0007520 "myoblast fusion" evidence=IGI;IMP
GO:0030036 "actin cytoskeleton organization" evidence=IMP
GO:0030713 "ovarian follicle cell stalk formation" evidence=IMP
GO:0006886 "intracellular protein transport" evidence=IMP
GO:0022416 "chaeta development" evidence=IMP
GO:0045747 "positive regulation of Notch signaling pathway" evidence=IMP
GO:0000902 "cell morphogenesis" evidence=IMP
GO:0051491 "positive regulation of filopodium assembly" evidence=IMP
GO:0010592 "positive regulation of lamellipodium assembly" evidence=IMP
ZFIN|ZDB-GENE-070424-10 actr3b "ARP3 actin-related protein 3 homolog B (yeast)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1N049 ACTR3 "Actin-related protein 3" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P61157 ACTR3 "Actin-related protein 3" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P679 ACTR3B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9PAK3 ACTR3B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|B4DXW1 ACTR3 "cDNA, FLJ79295, highly similar to Actin-like protein 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F5H3P5 ACTR3 "Actin-related protein 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P61158 ACTR3 "Actin-related protein 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F2Z5D2 ACTR3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q99JY9ARP3_MOUSENo assigned EC number0.60100.36770.4090yesN/A
Q5R8R1ARP3_PONABNo assigned EC number0.60100.36770.4090yesN/A
P61157ARP3_BOVINNo assigned EC number0.60100.36770.4090yesN/A
P61158ARP3_HUMANNo assigned EC number0.60100.36770.4090yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
PTZ00280414 PTZ00280, PTZ00280, Actin-related protein 3; Provi 9e-56
PTZ00280414 PTZ00280, PTZ00280, Actin-related protein 3; Provi 4e-42
smart00268373 smart00268, ACTIN, Actin 7e-27
smart00268373 smart00268, ACTIN, Actin 3e-25
pfam00022367 pfam00022, Actin, Actin 4e-15
PTZ00004378 PTZ00004, PTZ00004, actin-2; Provisional 1e-14
pfam00022367 pfam00022, Actin, Actin 2e-14
COG5277444 COG5277, COG5277, Actin and related proteins [Cyto 1e-13
PTZ00281376 PTZ00281, PTZ00281, actin; Provisional 9e-12
PTZ00004378 PTZ00004, PTZ00004, actin-2; Provisional 1e-11
COG5277444 COG5277, COG5277, Actin and related proteins [Cyto 1e-11
PTZ00466380 PTZ00466, PTZ00466, actin-like protein; Provisiona 1e-09
PTZ00466380 PTZ00466, PTZ00466, actin-like protein; Provisiona 4e-08
PTZ00452375 PTZ00452, PTZ00452, actin; Provisional 4e-08
cd00012185 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- 6e-08
PTZ00281376 PTZ00281, PTZ00281, actin; Provisional 7e-08
PTZ00452375 PTZ00452, PTZ00452, actin; Provisional 3e-05
>gnl|CDD|240343 PTZ00280, PTZ00280, Actin-related protein 3; Provisional Back     alignment and domain information 
 Score =  190 bits (484), Expect = 9e-56
 Identities = 85/188 (45%), Positives = 112/188 (59%), Gaps = 22/188 (11%)

Query: 3   WILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTS 62
           +I  +LRER   IP E  L  A+ IKE+Y Y+ PDIAKEF KYD+DP    +        
Sbjct: 200 FIQQMLRERGEPIPAEDILLLAQRIKEKYCYVAPDIAKEFEKYDSDPKNHFK-------- 251

Query: 63  WKKSPSDRPSIPFFTQNFQFKSFL-----FS--FSNPDFTTPISEIVDTVIQNCPIDVRR 115
            K +  +  +   +T +  ++ FL     F     + ++TTP+ E+VD  IQ+CPID RR
Sbjct: 252 -KYTAVNSVTKKPYTVDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDAIQSCPIDCRR 310

Query: 116 PLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIK-----VTEVSRKFQ 170
           PLY NIVLSGGSTMF+ F +RLQRD+++ VD RLK +E LSGG +K     V  VS   Q
Sbjct: 311 PLYKNIVLSGGSTMFKGFDKRLQRDVRKRVDRRLKKAEELSGGKLKPIPIDVNVVSHPRQ 370

Query: 171 GRRLHWYG 178
            R   WYG
Sbjct: 371 -RYAVWYG 377

Length = 414
>gnl|CDD|240343 PTZ00280, PTZ00280, Actin-related protein 3; Provisional Back     alignment and domain information
>gnl|CDD|214592 smart00268, ACTIN, Actin Back     alignment and domain information
>gnl|CDD|214592 smart00268, ACTIN, Actin Back     alignment and domain information
>gnl|CDD|200935 pfam00022, Actin, Actin Back     alignment and domain information
>gnl|CDD|240225 PTZ00004, PTZ00004, actin-2; Provisional Back     alignment and domain information
>gnl|CDD|200935 pfam00022, Actin, Actin Back     alignment and domain information
>gnl|CDD|227602 COG5277, COG5277, Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|173506 PTZ00281, PTZ00281, actin; Provisional Back     alignment and domain information
>gnl|CDD|240225 PTZ00004, PTZ00004, actin-2; Provisional Back     alignment and domain information
>gnl|CDD|227602 COG5277, COG5277, Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|240426 PTZ00466, PTZ00466, actin-like protein; Provisional Back     alignment and domain information
>gnl|CDD|240426 PTZ00466, PTZ00466, actin-like protein; Provisional Back     alignment and domain information
>gnl|CDD|185631 PTZ00452, PTZ00452, actin; Provisional Back     alignment and domain information
>gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily Back     alignment and domain information
>gnl|CDD|173506 PTZ00281, PTZ00281, actin; Provisional Back     alignment and domain information
>gnl|CDD|185631 PTZ00452, PTZ00452, actin; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 465
KOG0676|consensus372 100.0
PTZ00452375 actin; Provisional 100.0
PTZ00466380 actin-like protein; Provisional 99.98
PTZ00004378 actin-2; Provisional 99.97
PTZ00281376 actin; Provisional 99.97
KOG0680|consensus400 99.97
PTZ00280414 Actin-related protein 3; Provisional 99.97
KOG0677|consensus389 99.96
KOG0677|consensus389 99.94
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 99.93
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 99.92
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 99.92
PTZ00452375 actin; Provisional 99.91
KOG0676|consensus372 99.91
PTZ00466380 actin-like protein; Provisional 99.9
PTZ00281376 actin; Provisional 99.9
KOG0679|consensus426 99.9
KOG0680|consensus400 99.9
COG5277444 Actin and related proteins [Cytoskeleton] 99.88
PTZ00004378 actin-2; Provisional 99.88
KOG0678|consensus415 99.85
PTZ00280414 Actin-related protein 3; Provisional 99.85
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 99.8
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 99.78
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 99.77
KOG0678|consensus415 99.76
COG5277444 Actin and related proteins [Cytoskeleton] 99.65
KOG0681|consensus 645 99.63
KOG0679|consensus426 99.55
KOG0681|consensus645 99.31
PRK13930335 rod shape-determining protein MreB; Provisional 98.72
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 98.71
PRK13927334 rod shape-determining protein MreB; Provisional 98.62
PRK13929335 rod-share determining protein MreBH; Provisional 98.59
PRK13929335 rod-share determining protein MreBH; Provisional 98.59
PRK13930335 rod shape-determining protein MreB; Provisional 98.49
PRK13927334 rod shape-determining protein MreB; Provisional 98.35
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 98.34
PRK13928336 rod shape-determining protein Mbl; Provisional 98.16
KOG0797|consensus618 98.02
PRK13928336 rod shape-determining protein Mbl; Provisional 97.67
KOG0797|consensus618 97.31
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 96.71
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 96.15
PRK09472420 ftsA cell division protein FtsA; Reviewed 93.76
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 93.59
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 93.34
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 93.32
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 92.84
COG1077342 MreB Actin-like ATPase involved in cell morphogene 91.25
COG1077342 MreB Actin-like ATPase involved in cell morphogene 90.39
PRK15080267 ethanolamine utilization protein EutJ; Provisional 89.58
PRK13917344 plasmid segregation protein ParM; Provisional 88.42
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 87.99
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 85.44
PRK15080267 ethanolamine utilization protein EutJ; Provisional 82.36
>KOG0676|consensus Back     alignment and domain information 
Probab=100.00  E-value=4.3e-35  Score=299.28  Aligned_cols=182  Identities=24%  Similarity=0.392  Sum_probs=160.6

Q ss_pred             HHHHHHHHhCCCCCCCcchHHHHHHhhhhcccccCChHHHHhhccCCCCcceeeEecCCCCCCCCCCCCCCCCceEEEec
Q psy6341           2 KWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQ   81 (465)
Q Consensus         2 ~yL~~lL~~rg~~~~~~~e~~iv~~IKE~~CyVs~d~~~e~~~~~~~~~~~~~~y~LP~~~~~~DG~~~~~~~~~~I~l~   81 (465)
                      +||+++|.++|+++.+..++++|++|||++|||++|+.+|+.. .........+|+||      ||        +.++++
T Consensus       184 ~~l~~~L~~~g~s~~~~~~~eIv~diKeklCyvald~~~e~~~-~~~~~~l~~~y~lP------Dg--------~~i~i~  248 (372)
T KOG0676|consen  184 DYLLKQLRKRGYSFTTSAEFEIVRDIKEKLCYVALDFEEEEET-ANTSSSLESSYELP------DG--------QKITIG  248 (372)
T ss_pred             HHHHHHHHhcccccccccHHHHHHHhHhhhcccccccchhhhc-ccccccccccccCC------CC--------CEEecC
Confidence            5899999999999999999999999999999999999999876 32334556779999      89        899999


Q ss_pred             ccccc-cc-CCCCCC----CCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhccc
Q psy6341          82 FKSFL-FS-FSNPDF----TTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETL  155 (465)
Q Consensus        82 ~Erf~-PE-l~~~~~----~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~~  155 (465)
                      +|||+ || +|+|+.    ..||++++++||.+||+|+|+.||+||||+||+|++|||.+||++||+.+.|         
T Consensus       249 ~erf~~pE~lFqP~~~g~e~~gi~~~~~~sI~kcd~dlrk~L~~nivLsGGtT~~pGl~~Rl~kEl~~l~P---------  319 (372)
T KOG0676|consen  249 NERFRCPEVLFQPSLLGMESPGIHELTVNSIMKCDIDLRKDLYENIVLSGGTTMFPGLADRLQKELQALAP---------  319 (372)
T ss_pred             CcccccchhcCChhhcCCCCCchhHHHHHHHHhCChhHhHHHHhheEEeCCcccchhHHHHHHHHHhhcCC---------
Confidence            99999 88 344331    7899999999999999999999999999999999999999999999999876         


Q ss_pred             cCccceeeeeecccccceeeeecccccCCcccccceEEEeeeecccCCCCCccccccc
Q psy6341         156 SGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGRGRPKKRWKDC  213 (465)
Q Consensus       156 ~~~~~~v~v~~~~~r~~~~aWiGgSilAsl~~~~~~~vtke~y~k~g~Grp~~rW~d~  213 (465)
                        +..+++++++|+| .+++|+||||+|++++|+++++++++|.+.|   |...|+.|
T Consensus       320 --~~~~ikv~~pp~r-~~s~WlGgSIlaslstfq~~witk~eY~e~g---~~~~~rk~  371 (372)
T KOG0676|consen  320 --STIKIKVIAPPER-KYSAWLGGSILASLSTFQQMWITKEEYEEHG---PSIIHRKC  371 (372)
T ss_pred             --CCcceEEecCccc-ccceecCceeEeecchHhhccccHHHHhhhC---Cceeeecc
Confidence              3567999999999 8999999999999999999999999998777   35556544

>PTZ00452 actin; Provisional Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>KOG0680|consensus Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>KOG0677|consensus Back     alignment and domain information
>KOG0677|consensus Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>KOG0676|consensus Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>KOG0679|consensus Back     alignment and domain information
>KOG0680|consensus Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>KOG0678|consensus Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>KOG0678|consensus Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>KOG0681|consensus Back     alignment and domain information
>KOG0679|consensus Back     alignment and domain information
>KOG0681|consensus Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>KOG0797|consensus Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>KOG0797|consensus Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
1k8k_A418 Crystal Structure Of Arp23 COMPLEX Length = 418 1e-53
1k8k_A418 Crystal Structure Of Arp23 COMPLEX Length = 418 9e-32
3dwl_A427 Crystal Structure Of Fission Yeast Arp2/3 Complex L 9e-34
3dwl_A427 Crystal Structure Of Fission Yeast Arp2/3 Complex L 1e-21
2oan_A375 Structure Of Oxidized Beta-Actin Length = 375 7e-12
3u4l_A375 Cryocooled Bovine Profilin:actin Crystal Structure 7e-12
3byh_A374 Model Of Actin-Fimbrin Abd2 Complex Length = 374 7e-12
2btf_A375 The Structure Of Crystalline Profilin-Beta-Actin Le 7e-12
1kxp_A375 Crystal Structure Of Human Vitamin D-binding Protei 8e-12
3b63_F357 Actin Filament Model In The Extended Form Of Acroms 8e-12
1ijj_A377 The X-Ray Crystal Structure Of The Complex Between 8e-12
3mn5_A359 Structures Of Actin-Bound Wh2 Domains Of Spire And 8e-12
3b63_L365 Actin Filament Model In The Extended Form Of Acroms 8e-12
3g37_O376 Cryo-Em Structure Of Actin Filament In The Presence 8e-12
1qz5_A375 Structure Of Rabbit Actin In Complex With Kabiramid 8e-12
1eqy_A377 Complex Between Rabbit Muscle Alpha-Actin: Human Ge 8e-12
4b1v_A376 Structure Of The Phactr1 Rpel-N Domain Bound To G-A 8e-12
3b63_D357 Actin Filament Model In The Extended Form Of Acroms 9e-12
1lcu_A371 Polylysine Induces An Antiparallel Actin Dimer That 9e-12
2w49_D372 Isometrically Contracting Insect Asynchronous Fligh 9e-12
2gwj_A371 Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form 9e-12
3m6g_A371 Crystal Structure Of Actin In Complex With Lobophor 9e-12
1atn_A373 Atomic Structure Of The Actin:dnase I Complex Lengt 9e-12
1t44_A370 Structural Basis Of Actin Sequestration By Thymosin 9e-12
2hf3_A374 Crystal Structure Of Monomeric Actin In The Adp Bou 9e-12
3b63_E365 Actin Filament Model In The Extended Form Of Acroms 9e-12
3b63_B364 Actin Filament Model In The Extended Form Of Acroms 9e-12
3w3d_A374 Crystal Structure Of Smooth Muscle G Actin Dnase I 9e-12
3eks_A375 Crystal Structure Of Monomeric Actin Bound To Cytoc 1e-11
1nlv_A375 Crystal Structure Of Dictyostelium Discoideum Actin 1e-11
1c0g_A375 Crystal Structure Of 1:1 Complex Between Gelsolin S 1e-11
1d4x_A375 Crystal Structure Of Caenorhabditis Elegans Mg-Atp 1e-11
1dej_A375 Crystal Structure Of A DictyosteliumTETRAHYMENA CHI 1e-11
1yag_A375 Structure Of The Yeast Actin-human Gelsolin Segment 2e-11
3b63_C365 Actin Filament Model In The Extended Form Of Acroms 2e-11
4efh_A375 Acanthamoeba Actin Complex With Spir Domain D Lengt 2e-11
3chw_A375 Complex Of Dictyostelium Discoideum Actin With Prof 5e-11
3ci5_A375 Complex Of Phosphorylated Dictyostelium Discoideum 5e-11
1c0f_A368 Crystal Structure Of Dictyostelium Caatp-Actin In C 6e-11
3a5l_C375 Crystal Structure Of A Dictyostelium P109a Mg2+-Act 1e-10
3a5m_C375 Crystal Structure Of A Dictyostelium P109i Mg2+-Act 1e-10
1yvn_A375 The Yeast Actin Val 159 Asn Mutant Complex With Hum 1e-10
3b63_A365 Actin Filament Model In The Extended Form Of Acroms 1e-10
2p9k_B394 Crystal Structure Of Bovine Arp23 COMPLEX CO-Crysta 3e-10
1k8k_B394 Crystal Structure Of Arp23 COMPLEX Length = 394 3e-10
>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX Length = 418 Back     alignment and structure 
Iteration: 1

 Score =  207 bits (527), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 110/183 (60%), Positives = 126/183 (68%), Gaps = 12/183 (6%)
Query: 3   WILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTS 62
           +I  LLR+RE+GIPPEQSLETAKA+KERYSY+CPD+ KEF KYD D  KW++      T 
Sbjct: 203 FIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQY----TG 258
Query: 63  WKKSPSDRPSIPFFTQNFQFKSFLF--SFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHN 120
                    SI    + F      F   F+NPDFT PISE+VD VIQNCPIDVRRPLY N
Sbjct: 259 INAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKN 318
Query: 121 IVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIK-----VTEVSRKFQGRRLH 175
           IVLSGGSTMFRDFGRRLQRD+KR VDARLKLSE LSGG +K     V  ++   Q R   
Sbjct: 319 IVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQ-RYAV 377
Query: 176 WYG 178
           W+G
Sbjct: 378 WFG 380
>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX Length = 418 Back     alignment and structure
>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking The Arp2 Subunit Length = 427 Back     alignment and structure
>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking The Arp2 Subunit Length = 427 Back     alignment and structure
>pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin Length = 375 Back     alignment and structure
>pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4 A Length = 375 Back     alignment and structure
>pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex Length = 374 Back     alignment and structure
>pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin Length = 375 Back     alignment and structure
>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In Complex With Skeletal Actin Length = 375 Back     alignment and structure
>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357 Back     alignment and structure
>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit Skeletal Muscle Actin And Latrunculin A At 2.85 A Resolution Length = 377 Back     alignment and structure
>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The Implication For Filament Nucleation Length = 359 Back     alignment and structure
>pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 Back     alignment and structure
>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of Phosphate Length = 376 Back     alignment and structure
>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C Length = 375 Back     alignment and structure
>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 377 Back     alignment and structure
>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin Length = 376 Back     alignment and structure
>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357 Back     alignment and structure
>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That Nucleates Filament Assembly: Crystal Structure At 3.5 A Resolution Length = 371 Back     alignment and structure
>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 372 Back     alignment and structure
>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form Length = 371 Back     alignment and structure
>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide Length = 371 Back     alignment and structure
>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex Length = 373 Back     alignment and structure
>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 370 Back     alignment and structure
>pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound State Length = 374 Back     alignment and structure
>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 Back     alignment and structure
>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 364 Back     alignment and structure
>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex Length = 374 Back     alignment and structure
>pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin D Length = 375 Back     alignment and structure
>pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin Complexed With Ca Atp And Human Gelsolin Segment 1 Length = 375 Back     alignment and structure
>pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment 1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT 228: Q228kT229AA230YE360H) Length = 375 Back     alignment and structure
>pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 375 Back     alignment and structure
>pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN Complex With Human Gelsolin Segment 1 Length = 375 Back     alignment and structure
>pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 375 Back     alignment and structure
>pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 Back     alignment and structure
>pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D Length = 375 Back     alignment and structure
>pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin And The Last Poly-Pro Of Human Vasp Length = 375 Back     alignment and structure
>pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 375 Back     alignment and structure
>pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 368 Back     alignment and structure
>pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375 Back     alignment and structure
>pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375 Back     alignment and structure
>pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human Gelsolin Segment 1 Length = 375 Back     alignment and structure
>pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 Back     alignment and structure
>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized With Atp And Crosslinked With Glutaraldehyde Length = 394 Back     alignment and structure
>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX Length = 394 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 2e-39
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 3e-31
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 2e-39
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 3e-37
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 5e-30
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 2e-27
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 1e-29
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 1e-27
3qb0_A 498 Actin-related protein 4; actin fold, ATP binding, 2e-16
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 3e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 427 Back     alignment and structure
 Score =  146 bits (369), Expect = 2e-39
 Identities = 75/180 (41%), Positives = 110/180 (61%), Gaps = 13/180 (7%)

Query: 3   WILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTS 62
           ++ SLLR+R     P+ SL+TA+ IKE   Y+CPDI KEF+++D +P ++++    S T 
Sbjct: 219 FVQSLLRDRN---EPDSSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITG 275

Query: 63  WKKSPSDRPSIPFFTQNFQFKSFLF--SFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHN 120
                    +I    + F      F    ++ DF TP+ E+VD V+Q+ PIDVR+ LY N
Sbjct: 276 ------HSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKN 329

Query: 121 IVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLH--WYG 178
           IVLSGGST+F++FG RLQRD+KR+VD R+  SE LSG      +V+     R+ +  W+G
Sbjct: 330 IVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFG 389
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 427 Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Length = 418 Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Length = 418 Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Length = 394 Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Length = 394 Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Length = 375 Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Length = 375 Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498 Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query465
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 99.97
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 99.97
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 99.95
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 99.92
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 99.92
4fo0_A593 Actin-related protein 8; chromatin remodeling, nuc 99.92
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 99.86
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 99.83
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 99.81
4fo0_A 593 Actin-related protein 8; chromatin remodeling, nuc 99.79
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 99.77
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 99.71
4am6_A655 Actin-like protein ARP8; nuclear protein, chromati 99.67
4am6_A 655 Actin-like protein ARP8; nuclear protein, chromati 99.59
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 98.45
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 97.92
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 97.84
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 96.74
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 96.51
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 96.0
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 95.94
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 95.65
2v7y_A 509 Chaperone protein DNAK; HSP70, heat shock protein, 95.44
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 95.28
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 95.12
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 94.31
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 94.17
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 93.45
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 91.54
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 91.26
3js6_A355 Uncharacterized PARM protein; partition, segregati 90.79
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 90.66
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 90.25
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 89.7
1yuw_A 554 Heat shock cognate 71 kDa protein; chaperone; 2.60 89.22
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 80.93
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=99.97  E-value=1.4e-32  Score=292.16  Aligned_cols=172  Identities=16%  Similarity=0.214  Sum_probs=143.5

Q ss_pred             HHHHHHHHhC------------------CCCCCCcc-------hHHHHHHhhhhcccccCC--hHHHHhhccCCCCccee
Q psy6341           2 KWILSLLRER------------------EIGIPPEQ-------SLETAKAIKERYSYICPD--IAKEFAKYDADPGKWMR   54 (465)
Q Consensus         2 ~yL~~lL~~r------------------g~~~~~~~-------e~~iv~~IKE~~CyVs~d--~~~e~~~~~~~~~~~~~   54 (465)
                      +||+++|.++                  ++++....       ++++|++|||++|||+.|  +.++.....   +...+
T Consensus       201 ~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~---~~~~~  277 (498)
T 3qb0_A          201 HLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELS---STAKR  277 (498)
T ss_dssp             HHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHH---TCCCE
T ss_pred             HHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhcc---CcCce
Confidence            6899999875                  44543321       566999999999999998  665532221   23468


Q ss_pred             eEecCCCCCCCCCCCCCCCCceEEEeccc-ccc-cc-CCCCC--------------------------------------
Q psy6341          55 NLFYSPTSWKKSPSDRPSIPFFTQNFQFK-SFL-FS-FSNPD--------------------------------------   93 (465)
Q Consensus        55 ~y~LP~~~~~~DG~~~~~~~~~~I~l~~E-rf~-PE-l~~~~--------------------------------------   93 (465)
                      .|+||      ||        +.|.+|+| ||+ || ||+|+                                      
T Consensus       278 ~yeLP------DG--------~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~  343 (498)
T 3qb0_A          278 SIESP------WN--------EEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSD  343 (498)
T ss_dssp             EEECS------SS--------CEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCCBCC--------
T ss_pred             EEECC------CC--------CEEEECchHhhhCchhhCCHhHcCCcccccccccccccccccccccccccccccccccc
Confidence            99999      99        99999999 999 76 44432                                      


Q ss_pred             ----------------------------------------------CCCchhhhhhcccccCCcccccccccceEEeccc
Q psy6341          94 ----------------------------------------------FTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGS  127 (465)
Q Consensus        94 ----------------------------------------------~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGs  127 (465)
                                                                    ...||+++|++||++||.|+|+.||+||||+||+
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r~~L~~nIvLsGGs  423 (498)
T 3qb0_A          344 KKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGT  423 (498)
T ss_dssp             ---------------------------------------------CCSCCHHHHHHHHHHTSCTTTHHHHHTTEEEESGG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHHHHHhcCEEEeCCc
Confidence                                                          2468999999999999999999999999999999


Q ss_pred             ccccchHHHHHHhhhhhhhhhhhhhccccCccceeeeeec---ccccceeeeecccccCCcccccceEEEeeeecccCC
Q psy6341         128 TMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSR---KFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGR  203 (465)
Q Consensus       128 Sl~~Gf~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~v~~~---~~r~~~~aWiGgSilAsl~~~~~~~vtke~y~k~g~  203 (465)
                      |+||||.+||++||+.++|            .++++++++   ++| ++++|+||||||+++.|+++|++|++|.+.|.
T Consensus       424 t~~pGf~~Rl~~El~~l~p------------~~~i~v~~~~~~~er-~~s~WiGgsilasl~~f~~~witk~EY~E~G~  489 (498)
T 3qb0_A          424 SSIPGLSDRLMTELNKILP------------SLKFRILTTGHTIER-QYQSWLGGSILTSLGTFHQLWVGKKEYEEVGV  489 (498)
T ss_dssp             GGSTTHHHHHHHHHHHHST------------TSCCCEECCSCTGGG-GSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCC
T ss_pred             cCchhHHHHHHHHHHHhCC------------CCeeEEEcCCCCCcc-CccEEcccEEEecCcchhceEEEHHHHhhhCc
Confidence            9999999999999999866            346777876   677 99999999999999999999999999988774
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 465
d1k8ka2258 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 1e-26
d1k8ka2258 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 9e-14
d1k8kb1190 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 2e-18
d1k8kb1190 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 2e-07
d2fxua2225 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxI 1e-14
d2fxua2225 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxI 1e-10
d1k8ka1158 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 { 5e-10
d2fxua1140 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 2e-07
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 258 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  106 bits (264), Expect = 1e-26
 Identities = 108/190 (56%), Positives = 125/190 (65%), Gaps = 13/190 (6%)

Query: 2   KWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPT 61
            +I  LLR+RE+GIPPEQSLETAKA+KERYSY+CPD+ KEF KYD D  KW++      T
Sbjct: 42  YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIK----QYT 97

Query: 62  SWKKSPSDRPSIPFFTQNFQFKSFLF--SFSNPDFTTPISEIVDTVIQNCPIDVRRPLYH 119
                     SI    + F      F   F+NPDFT PISE+VD VIQNCPIDVRRPLY 
Sbjct: 98  GINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYK 157

Query: 120 NIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGH 179
           NIVLSGGSTMFRDFGRRLQRD+KR VDARLKLSE LSGG +K   +        +    H
Sbjct: 158 NIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPI-------DVQVITH 210

Query: 180 VERRDESYIG 189
             +R   + G
Sbjct: 211 HMQRYAVWFG 220
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 258 Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Length = 190 Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Length = 190 Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 225 Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 225 Back     information, alignment and structure
>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 158 Back     information, alignment and structure
>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 140 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query465
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 99.97
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 99.97
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 99.89
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 99.52
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 99.45
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 99.39
d1k8ka1158 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 98.12
d2fxua1140 Actin {Cow (Bos taurus) [TaxId: 9913]} 97.77
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 96.04
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 95.33
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 94.91
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 92.69
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 83.34
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 82.2
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=3e-32  Score=264.43  Aligned_cols=192  Identities=55%  Similarity=0.878  Sum_probs=160.3

Q ss_pred             HHHHHHHHhCCCCCCCcchHHHHHHhhhhcccccCChHHHHhhccCCCCcceeeEecCCCCCCCCCCCCCCCCceEEEec
Q psy6341           2 KWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQ   81 (465)
Q Consensus         2 ~yL~~lL~~rg~~~~~~~e~~iv~~IKE~~CyVs~d~~~e~~~~~~~~~~~~~~y~LP~~~~~~DG~~~~~~~~~~I~l~   81 (465)
                      +||+++|.++++++.+..+.++++.+||+.|||+.|+.++++..........+.|.+| +....+|        +.+.++
T Consensus        42 ~~L~~~L~~~~~~~~~~~~~~~~~~~ke~~~~v~~d~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~i~~~  112 (258)
T d1k8ka2          42 YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGI-NAISKKE--------FSIDVG  112 (258)
T ss_dssp             HHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEE-CTTTCCE--------EEEEEC
T ss_pred             HHHHHHHHHcCCCCCcHHHHHHHHhHHhhhcccccchHHHHHhhcccccccccccccc-cccCCCC--------eEEecC
Confidence            6899999999999988888899999999999999999988765433333456778887 4334455        899999


Q ss_pred             ccccc-ccC-CCC-----CCCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhc-
Q psy6341          82 FKSFL-FSF-SNP-----DFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSE-  153 (465)
Q Consensus        82 ~Erf~-PEl-~~~-----~~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~-  153 (465)
                      .|||+ ||+ |+|     +...||+++|.+||++||+|+|+.|++||+|+||+|+++||.+||++||+.+++...++.. 
T Consensus       113 ~er~~~~E~lF~p~~~~~~~~~~l~~~i~~si~~~~~d~r~~L~~nIvl~GG~s~~~Gf~eRL~~EL~~~~~~~~~~~~~  192 (258)
T d1k8ka2         113 YERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEE  192 (258)
T ss_dssp             THHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceeccHHHhhhhhhcccccccchHHHHHHHHhccHHhhHHHHhCEEEecCcccCCCHHHHHHHHHHhhcchhhhhhhh
Confidence            99999 773 443     3257999999999999999999999999999999999999999999999998876544422 


Q ss_pred             ----cccCccceeeeeecccccceeeeecccccCCcccccceEEEeeeecccCC
Q psy6341         154 ----TLSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGR  203 (465)
Q Consensus       154 ----~~~~~~~~v~v~~~~~r~~~~aWiGgSilAsl~~~~~~~vtke~y~k~g~  203 (465)
                          .+.+..++++++++++| ++++|+||||+|+++.|++++++|++|.+.|.
T Consensus       193 ~~~~~~~~~~~~i~v~~~~~r-~~s~W~Ggsila~l~~f~~~~Itk~eY~E~G~  245 (258)
T d1k8ka2         193 LSGGRLKPKPIDVQVITHHMQ-RYAVWFGGSMLASTPEFYQVCHTKKDYEEIGP  245 (258)
T ss_dssp             HC----CCCCCCCCEECCTTC-TTHHHHHHHHHTTSHHHHHHSEEHHHHHHHCG
T ss_pred             ccccccCCCCceeeEecCCCC-CceehHHHHHHHcCccHHhheecHHHHhhhCh
Confidence                22334566788888888 99999999999999999999999999998885
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure