Psyllid ID: psy6390

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------
Protein Sequence
FCNLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAEYY
Secondary Structure (PSIPRED)
cHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccccccccccccEEEccccccHHHccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHcccccHHHHHHHHHcccccccccccHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccEEEccccccEEcccccEccccccccHHHccHHHHccccEccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccHHHcccccccccccccccHHHHcccccHHHHHHHHHHccccccccccHHHHHHcHHHHHccccccccccc
Coil and Loop (DISEMBL)
FCNLIQLEWEQVGTYQVKITTRLFLQATsfcikpksnivKVADFGlarafgvpvriyTHEVVtlwyrapevllgsqryscpvdvwsIGCIFAeiatrkplfqgdseIDQLFRIFRVlttptednwpgvsklpdykttfpewsnfcldkhvknldqDGLDLLEKTliycpatriNAENALkhkyfadktdlpkfaeyy
Flexible Loop (DISEMBL)
FCNLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLttptednwpgvsKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRInaenalkhkyfadktdlpkfaeyy
Low Complexity Region (SEG)
FCNLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAEYY
Disordered region (IsUnstruct)
*CNLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT*********
Disordered Region (DISOPRED)
FCNL***EWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL*******
Disordered Region (DISEMBL)
FCNLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAEYY
Disordered Region (DISPRO)
FCNLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
FCNLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAEYY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	197	2.2.26 [Sep-21-2011]
P23572	297	Cyclin-dependent kinase 1	yes	N/A	0.883	0.585	0.623	5e-65
P35567	302	Cyclin-dependent kinase 1	N/A	N/A	0.913	0.596	0.604	2e-61
Q9DG98	303	Cyclin-dependent kinase 1	N/A	N/A	0.786	0.511	0.700	7e-61
Q9DGD3	303	Cyclin-dependent kinase 1	N/A	N/A	0.786	0.511	0.700	7e-61
Q9DGA2	303	Cyclin-dependent kinase 1	N/A	N/A	0.786	0.511	0.700	8e-61
Q9DGA5	303	Cyclin-dependent kinase 1	N/A	N/A	0.786	0.511	0.694	9e-61
P13863	303	Cyclin-dependent kinase 1	yes	N/A	0.913	0.594	0.584	1e-60
P11440	297	Cyclin-dependent kinase 1	yes	N/A	0.862	0.572	0.605	1e-60
P39951	297	Cyclin-dependent kinase 1	yes	N/A	0.827	0.548	0.617	2e-60
P24033	302	Cyclin-dependent kinase 1	N/A	N/A	0.913	0.596	0.588	2e-60

>sp|P23572|CDK1_DROME Cyclin-dependent kinase 1 OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1

 Score =  246 bits (629), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 121/194 (62%), Positives = 145/194 (74%), Gaps = 20/194 (10%)

Query: 6   QLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAF 50
            +E E V +Y  +IT+     A  FC         +KP      KS ++KVADFGL R+F
Sbjct: 99  HMESELVRSYLYQITS-----AILFCHRRRVLHRDLKPQNLLIDKSGLIKVADFGLGRSF 153

Query: 51  GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL 110
           G+PVRIYTHE+VTLWYRAPEVLLGS RYSCPVD+WSIGCIFAE+ATRKPLFQGDSEIDQL
Sbjct: 154 GIPVRIYTHEIVTLWYRAPEVLLGSPRYSCPVDIWSIGCIFAEMATRKPLFQGDSEIDQL 213

Query: 111 FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPA 170
           FR+FR+L TPTED WPGV+ LPDYK TFP WS   L   +KNLD +G+DL++K LIY P 
Sbjct: 214 FRMFRILKTPTEDIWPGVTSLPDYKNTFPCWSTNQLTNQLKNLDANGIDLIQKMLIYDPV 273

Query: 171 TRINAENALKHKYF 184
            RI+A++ L+H YF
Sbjct: 274 HRISAKDILEHPYF 287

Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. p34 is a component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 3

>sp|P35567|CDK1A_XENLA Cyclin-dependent kinase 1-A OS=Xenopus laevis GN=cdk1-a PE=1 SV=1

 Score =  234 bits (597), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 119/197 (60%), Positives = 137/197 (69%), Gaps = 17/197 (8%)

Query: 12  VGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRI 56
           + T  VK      LQ   FC         +KP++       ++K+ADFGLARAFG+PVR+
Sbjct: 100 IDTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDSKGVIKLADFGLARAFGIPVRV 159

Query: 57  YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
           YTHEVVTLWYRAPEVLLGS RYS PVDVWSIG IFAEIAT+KPLF GDSEIDQLFRIFR 
Sbjct: 160 YTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIATKKPLFHGDSEIDQLFRIFRA 219

Query: 117 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE 176
           L TP  + WP V  L DYK +FP+W    L  +VKN+D+DGLDLL K LIY PA RI+A 
Sbjct: 220 LGTPNNEVWPEVESLQDYKNSFPKWKGGSLSANVKNIDKDGLDLLAKMLIYDPAKRISAR 279

Query: 177 NALKHKYF--ADKTDLP 191
            AL H YF   DK+ LP
Sbjct: 280 KALLHPYFDDLDKSSLP 296

Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9DG98|CDK1_ORYLU Cyclin-dependent kinase 1 OS=Oryzias luzonensis GN=cdk1 PE=2 SV=1

 Score =  233 bits (594), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 110/157 (70%), Positives = 122/157 (77%), Gaps = 2/157 (1%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
            ++K+ADFGLARAFGVPVR+YTHEVVTLWYRAPEVLLGS RYS PVDVWS G IFAE+AT
Sbjct: 140 GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELAT 199

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
           +KPLF GDSEIDQLFRIFR L TP  D WP V  LPDYK TFP+W    L   VKNLD++
Sbjct: 200 KKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWKGGSLSSMVKNLDKN 259

Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
           GLDLL K LIY P  RI+A  A+ H YF   DK+ LP
Sbjct: 260 GLDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLP 296

Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II. Catalytic component of MPF.

Oryzias luzonensis (taxid: 104659)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9DGD3|CDK1_ORYLA Cyclin-dependent kinase 1 OS=Oryzias latipes GN=cdk1 PE=2 SV=1

 Score =  233 bits (593), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 110/157 (70%), Positives = 122/157 (77%), Gaps = 2/157 (1%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
            ++K+ADFGLARAFGVPVR+YTHEVVTLWYRAPEVLLGS RYS PVDVWS G IFAE+AT
Sbjct: 140 GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELAT 199

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
           +KPLF GDSEIDQLFRIFR L TP  D WP V  LPDYK TFP+W    L   VKNLD++
Sbjct: 200 KKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWKEGSLSSMVKNLDKN 259

Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
           GLDLL K LIY P  RI+A  A+ H YF   DK+ LP
Sbjct: 260 GLDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLP 296

Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II. Catalytic component of MPF.

Oryzias latipes (taxid: 8090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9DGA2|CDK1_ORYJA Cyclin-dependent kinase 1 OS=Oryzias javanicus GN=cdk1 PE=2 SV=1

 Score =  233 bits (593), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 110/157 (70%), Positives = 122/157 (77%), Gaps = 2/157 (1%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
            ++K+ADFGLARAFGVPVR+YTHEVVTLWYRAPEVLLGS RYS PVDVWS G IFAE+AT
Sbjct: 140 GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELAT 199

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
           +KPLF GDSEIDQLFRIFR L TP  D WP V  LPDYK TFP+W    L   VKNLD++
Sbjct: 200 KKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWMEGSLSSMVKNLDKN 259

Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
           GLDLL K LIY P  RI+A  A+ H YF   DK+ LP
Sbjct: 260 GLDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLP 296

Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II. Catalytic component of MPF.

Oryzias javanicus (taxid: 123683)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9DGA5|CDK1_ORYCU Cyclin-dependent kinase 1 OS=Oryzias curvinotus GN=cdk1 PE=2 SV=1

 Score =  233 bits (593), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 109/157 (69%), Positives = 123/157 (78%), Gaps = 2/157 (1%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
            ++K+ADFGL+RAFGVPVR+YTHEVVTLWYRAPEVLLGS RYS PVDVWS G IFAE+AT
Sbjct: 140 GVIKLADFGLSRAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELAT 199

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
           +KPLF GDSEIDQLFRIFR L TP  D WP V  LPDYK+TFP+W    L   VKNLD++
Sbjct: 200 KKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKSTFPKWKGGSLSSMVKNLDKN 259

Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
           GLDLL K LIY P  RI+A  A+ H YF   DK+ LP
Sbjct: 260 GLDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLP 296

Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II. Catalytic component of MPF.

Oryzias curvinotus (taxid: 104658)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P13863|CDK1_CHICK Cyclin-dependent kinase 1 OS=Gallus gallus GN=CDK1 PE=1 SV=1

 Score =  232 bits (591), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 118/202 (58%), Positives = 140/202 (69%), Gaps = 22/202 (10%)

Query: 7   LEWEQVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFG 51
           L+  +V +Y  +I     LQ   FC         +KP++       ++K+ADFGLARAFG
Sbjct: 100 LDRSRVKSYLYQI-----LQGIVFCHSRRVLHRDLKPQNLLIDDKGVIKLADFGLARAFG 154

Query: 52  VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLF 111
           +PVR+YTHEVVTLWYR+PEVLLGS  YS PVD+WSIG IFAE+AT+KPLF GDSEIDQLF
Sbjct: 155 IPVRVYTHEVVTLWYRSPEVLLGSALYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLF 214

Query: 112 RIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPAT 171
           RIFR L TP  D WP V  L DYK TFP+W    L  HV+NLD+DGLDLL K LIY PA 
Sbjct: 215 RIFRALGTPNNDVWPDVESLQDYKNTFPKWKPGSLGTHVQNLDEDGLDLLSKMLIYDPAK 274

Query: 172 RINAENALKHKYF--ADKTDLP 191
           RI+ + AL H YF   DK+ LP
Sbjct: 275 RISGKMALNHPYFDDLDKSTLP 296

Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. p34 is a component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P11440|CDK1_MOUSE Cyclin-dependent kinase 1 OS=Mus musculus GN=Cdk1 PE=1 SV=3

 Score =  232 bits (591), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 112/185 (60%), Positives = 131/185 (70%), Gaps = 15/185 (8%)

Query: 17  VKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEV 61
           VK      LQ   FC         +KP++        +K+ADFGLARAFG+P+R+YTHEV
Sbjct: 105 VKSYLHQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEV 164

Query: 62  VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 121
           VTLWYR+PEVLLGS RYS PVD+WSIG IFAE+AT+KPLF GDSEIDQLFRIFR L TP 
Sbjct: 165 VTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPN 224

Query: 122 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
            + WP V  L DYK TFP+W    L  HVKNLD++GLDLL K L+Y PA RI+ + ALKH
Sbjct: 225 NEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKH 284

Query: 182 KYFAD 186
            YF D
Sbjct: 285 PYFDD 289

Plays a key role in the control of the eukaryotic cell cycle by modulating the centrosome cycle as well as mitotic onset; promotes G2-M transition, and regulates G1 progress and G1-S transition via association with multiple interphase cyclins. Required in higher cells for entry into S-phase and mitosis. Phosphorylates PARVA/actopaxin, APC, AMPH, APC, BARD1, Bcl-xL/BCL2L1, BRCA2, CALD1, CASP8, CDC7, CDC20, CDC25A, CDC25C, CC2D1A, CSNK2 proteins/CKII, FZR1/CDH1, CDK7, CEBPB, CHAMP1, DMD/dystrophin, EEF1 proteins/EF-1, EZH2, KIF11/EG5, EGFR, FANCG, FOS, GFAP, GOLGA2/GM130, GRASP1, UBE2A/hHR6A, HIST1H1 proteins/histone H1, HMGA1, HIVEP3/KRC, LMNA, LMNB, LMNC, LBR, LATS1, MAP1B, MAP4, MARCKS, MCM2, MCM4, MKLP1, MYB, NEFH, NFIC, NPC/nuclear pore complex, PITPNM1/NIR2, NPM1, NCL, NUCKS1, NPM1/numatrin, ORC1, PRKAR2A, EEF1E1/p18, EIF3F/p47, p53/TP53, NONO/p54NRB, PAPOLA, PLEC/plectin, RB1, UL40/R2, RAB4A, RAP1GAP, RCC1, RPS6KB1/S6K1, KHDRBS1/SAM68, ESPL1, SKI, BIRC5/survivin, STIP1, TEX14, beta-tubulins, MAPT/TAU, NEDD1, VIM/vimentin, TK1, FOXO1, RUNX1/AML1 and RUNX2. CDK1/CDC2-cyclin-B controls pronuclear union in interphase fertilized eggs. Essential for early stages of embryonic development. During G2 and early mitosis, CDC25A/B/C-mediated dephosphorylation activates CDK1/cyclin complexes which phosphorylate several substrates that trigger at least centrosome separation, Golgi dynamics, nuclear envelope breakdown and chromosome condensation. Once chromosomes are condensed and aligned at the metaphase plate, CDK1 activity is switched off by WEE1- and PKMYT1-mediated phosphorylation to allow sister chromatid separation, chromosome decondensation, reformation of the nuclear envelope and cytokinesis. Inactivated by PKR/EIF2AK2- and WEE1-mediated phosphorylation upon DNA damage to stop cell cycle and genome replication at the G2 checkpoint thus facilitating DNA repair. Reactivated after successful DNA repair through WIP1-dependent signaling leading to CDC25A/B/C-mediated dephosphorylation and restoring cell cycle progression. In proliferating cells, CDK1-mediated FOXO1 phosphorylation at the G2-M phase represses FOXO1 interaction with 14-3-3 proteins and thereby promotes FOXO1 nuclear accumulation and transcription factor activity, leading to cell death of postmitotic neurons. The phosphorylation of beta-tubulins regulates microtubule dynamics during mitosis. NEDD1 phosphorylation promotes PLK1-mediated NEDD1 phosphorylation and subsequent targeting of the gamma-tubulin ring complex (gTuRC) to the centrosome, an important step for spindle formation. In addition, CC2D1A phosphorylation regulates CC2D1A spindle pole localization and association with SCC1/RAD21 and centriole cohesion during mitosis. The phosphorylation of Bcl-xL/BCL2L1 after prolongated G2 arrest upon DNA damage triggers apoptosis. In contrast, CASP8 phosphorylation during mitosis prevents its activation by proteolysis and subsequent apoptosis. This phosphorylation occurs in cancer cell lines, as well as in primary breast tissues and lymphocytes. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. CALD1 phosphorylation promotes Schwann cell migration during peripheral nerve regeneration.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P39951|CDK1_RAT Cyclin-dependent kinase 1 OS=Rattus norvegicus GN=Cdk1 PE=1 SV=1

 Score =  231 bits (590), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/178 (61%), Positives = 129/178 (72%), Gaps = 15/178 (8%)

Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ   FC         +KP++        +K+ADFGLARAFG+P+R+YTHEVVTLWYR+
Sbjct: 112 ILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRS 171

Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PEVLLGS RYS PVD+WSIG IFAE+AT+KPLF GDSEIDQLFRIFR L TP  + WP V
Sbjct: 172 PEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEV 231

Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
             L DYK TFP+W    L  HVKNLD++GLDLL K L+Y PA RI+ + ALKH YF D
Sbjct: 232 ESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYFDD 289

Plays a key role in the control of the eukaryotic cell cycle by modulating the centrosome cycle as well as mitotic onset; promotes G2-M transition, and regulates G1 progress and G1-S transition via association with multiple interphase cyclins. Required in higher cells for entry into S-phase and mitosis. Phosphorylates PARVA/actopaxin, APC, AMPH, APC, BARD1, Bcl-xL/BCL2L1, BRCA2, CALD1, CASP8, CDC7, CDC20, CDC25A, CDC25C, CC2D1A, CSNK2 proteins/CKII, FZR1/CDH1, CDK7, CEBPB, CHAMP1, DMD/dystrophin, EEF1 proteins/EF-1, EZH2, KIF11/EG5, EGFR, FANCG, FOS, GFAP, GOLGA2/GM130, GRASP1, UBE2A/hHR6A, HIST1H1 proteins/histone H1, HMGA1, HIVEP3/KRC, LMNA, LMNB, LMNC, LBR, LATS1, MAP1B, MAP4, MARCKS, MCM2, MCM4, MKLP1, MYB, NEFH, NFIC, NPC/nuclear pore complex, PITPNM1/NIR2, NPM1, NCL, NUCKS1, NPM1/numatrin, ORC1, PRKAR2A, EEF1E1/p18, EIF3F/p47, p53/TP53, NONO/p54NRB, PAPOLA, PLEC/plectin, RB1, UL40/R2, RAB4A, RAP1GAP, RCC1, RPS6KB1/S6K1, KHDRBS1/SAM68, ESPL1, SKI, BIRC5/survivin, STIP1, TEX14, beta-tubulins, MAPT/TAU, NEDD1, VIM/vimentin, TK1, FOXO1, RUNX1/AML1 and RUNX2. CDK1/CDC2-cyclin-B controls pronuclear union in interphase fertilized eggs. Essential for early stages of embryonic development. During G2 and early mitosis, CDC25A/B/C-mediated dephosphorylation activates CDK1/cyclin complexes which phosphorylate several substrates that trigger at least centrosome separation, Golgi dynamics, nuclear envelope breakdown and chromosome condensation. Once chromosomes are condensed and aligned at the metaphase plate, CDK1 activity is switched off by WEE1- and PKMYT1-mediated phosphorylation to allow sister chromatid separation, chromosome decondensation, reformation of the nuclear envelope and cytokinesis. Inactivated by PKR/EIF2AK2- and WEE1-mediated phosphorylation upon DNA damage to stop cell cycle and genome replication at the G2 checkpoint thus facilitating DNA repair. Reactivated after successful DNA repair through WIP1-dependent signaling leading to CDC25A/B/C-mediated dephosphorylation and restoring cell cycle progression. In proliferating cells, CDK1-mediated FOXO1 phosphorylation at the G2-M phase represses FOXO1 interaction with 14-3-3 proteins and thereby promotes FOXO1 nuclear accumulation and transcription factor activity, leading to cell death of postmitotic neurons. The phosphorylation of beta-tubulins regulates microtubule dynamics during mitosis. NEDD1 phosphorylation promotes PLK1-mediated NEDD1 phosphorylation and subsequent targeting of the gamma-tubulin ring complex (gTuRC) to the centrosome, an important step for spindle formation. In addition, CC2D1A phosphorylation regulates CC2D1A spindle pole localization and association with SCC1/RAD21 and centriole cohesion during mitosis. The phosphorylation of Bcl-xL/BCL2L1 after prolongated G2 arrest upon DNA damage triggers apoptosis. In contrast, CASP8 phosphorylation during mitosis prevents its activation by proteolysis and subsequent apoptosis. This phosphorylation occurs in cancer cell lines, as well as in primary breast tissues and lymphocytes. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing (By similarity). CALD1 phosphorylation promotes Schwann cell migration during peripheral nerve regeneration.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P24033|CDK1B_XENLA Cyclin-dependent kinase 1-B OS=Xenopus laevis GN=cdk1-b PE=1 SV=2

 Score =  231 bits (590), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 116/197 (58%), Positives = 136/197 (69%), Gaps = 17/197 (8%)

Query: 12  VGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRI 56
           + T  VK      LQ   FC         +KP++       ++K+ADFGLARAFG+PVR+
Sbjct: 100 IDTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV 159

Query: 57  YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
           YTHEVVTLWYRA EVLLGS RYS PVDVWS+G IFAEIAT+KPLF GDSEIDQLFRIFR 
Sbjct: 160 YTHEVVTLWYRASEVLLGSVRYSTPVDVWSVGTIFAEIATKKPLFHGDSEIDQLFRIFRS 219

Query: 117 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE 176
           L TP  + WP V  L DYK TFP+W    L  +VKN+D+DGLDLL K L+Y PA RI+A 
Sbjct: 220 LGTPNNEVWPEVESLQDYKNTFPKWKGGSLSSNVKNIDEDGLDLLSKMLVYDPAKRISAR 279

Query: 177 NALKHKYF--ADKTDLP 191
            A+ H YF   DK+ LP
Sbjct: 280 KAMLHPYFDDLDKSSLP 296

Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	197
357618076	316	cell division cycle 2 [Danaus plexippus]	0.771	0.481	0.723	3e-65
112984382	319	cell division cycle 2 [Bombyx mori] gi|2	0.771	0.476	0.723	5e-65
198444891	299	cell division cycle 2 [Scylla paramamosa	0.796	0.525	0.710	6e-65
187610685	299	cell division cycle 2 protein [Penaeus m	0.771	0.508	0.730	7e-65
209360745	299	Cdc2 kinase [Eriocheir sinensis]	0.786	0.518	0.713	2e-64
195457787	296	GK23499 [Drosophila willistoni] gi|19417	0.883	0.587	0.618	3e-64
283854617	299	Cdc2 kinase [Macrobrachium nipponense]	0.796	0.525	0.710	4e-64
202072069	320	cell division cycle 2 [Galleria mellonel	0.761	0.468	0.726	9e-64
407911902	299	cell division cycle 2 protein [Cherax qu	0.796	0.525	0.698	1e-63
195053229	298	GH13856 [Drosophila grimshawi] gi|193900	0.812	0.536	0.714	2e-63

>gi|357618076|gb|EHJ71170.1| cell division cycle 2 [Danaus plexippus]

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 110/152 (72%), Positives = 134/152 (88%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K+ I+KVADFGL RAFGVPVR+YTHEVVTLWYRAPEVLLGSQRYSCP+D+WS+GCIF+E+
Sbjct: 138 KTGIIKVADFGLGRAFGVPVRVYTHEVVTLWYRAPEVLLGSQRYSCPIDMWSVGCIFSEM 197

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
           +++KPLFQGDSEIDQLFRIFR+L TPTE+ WPGVS LPDYK TFP W++F L  HV+NLD
Sbjct: 198 SSKKPLFQGDSEIDQLFRIFRMLRTPTEEIWPGVSSLPDYKPTFPNWTSFNLHNHVQNLD 257

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
           + G+DLL+K L+Y P  RI+A+ A +H+YF D
Sbjct: 258 EAGMDLLQKMLVYDPIRRISAKEARRHRYFRD 289

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|112984382|ref|NP_001037512.1| cell division cycle 2 [Bombyx mori] gi|2257629|dbj|BAA21483.1| Bm cdc2 [Bombyx mori]

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 110/152 (72%), Positives = 134/152 (88%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K+ I+KVADFGL RAFGVPVR+YTHEVVTLWYRAPEVLLGSQRYSCP+D+WS+GCIF+E+
Sbjct: 138 KTGIIKVADFGLGRAFGVPVRVYTHEVVTLWYRAPEVLLGSQRYSCPIDIWSVGCIFSEM 197

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
           +++KPLFQGDSEIDQLFRIFR+L TPTE+ WPGVS LPDYK TFP W+ + L  HV+NLD
Sbjct: 198 SSKKPLFQGDSEIDQLFRIFRMLRTPTEEIWPGVSLLPDYKPTFPNWNTYNLHNHVQNLD 257

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
           + G+DLL+K L+Y P  RI+A++A +HKYF D
Sbjct: 258 EVGMDLLQKMLVYDPVKRISAKDARRHKYFRD 289

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198444891|gb|ACH88358.1| cell division cycle 2 [Scylla paramamosain]

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 113/159 (71%), Positives = 135/159 (84%), Gaps = 2/159 (1%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +  ++K+ADFGLARAFG+PVR+YTHEVVTLWYRAPEVLLGS RYSCPVDVWS+GCIFAE+
Sbjct: 138 EQGVIKIADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSARYSCPVDVWSLGCIFAEM 197

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
            T++PLF GDSEIDQLFRIFR LTTPTE+NWPGV++L DYKT FP+W+++ L   VK +D
Sbjct: 198 VTKRPLFHGDSEIDQLFRIFRTLTTPTEENWPGVTQLQDYKTNFPKWTDYNLANSVKQMD 257

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
            DGLDLL KTLIY P  RI+A+ ALKH YF   D++ LP
Sbjct: 258 SDGLDLLSKTLIYDPTKRISAKEALKHPYFDDLDRSSLP 296

Source: Scylla paramamosain

Species: Scylla paramamosain

Genus: Scylla

Family: Portunidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|187610685|gb|ACD13591.1| cell division cycle 2 protein [Penaeus monodon]

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 111/152 (73%), Positives = 130/152 (85%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +  ++K+ADFGLARAFG+PVR+YTHEVVTLWYRAPEVLLGS RYSCPVDVWS+GCIFAE+
Sbjct: 138 EQGVIKIADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSSRYSCPVDVWSLGCIFAEM 197

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
            T++PLF GDSEIDQLFRIFR LTTPTEDNWPGV++L DYK  FP+W+++ L   VK +D
Sbjct: 198 VTKRPLFHGDSEIDQLFRIFRTLTTPTEDNWPGVTQLQDYKANFPKWTDYNLGNSVKQMD 257

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
            DGLDLL KTLIY P  RI+A+ ALKH YF D
Sbjct: 258 SDGLDLLSKTLIYDPTRRISAKEALKHPYFDD 289

Source: Penaeus monodon

Species: Penaeus monodon

Genus: Penaeus

Family: Penaeidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|209360745|gb|ACI43009.1| Cdc2 kinase [Eriocheir sinensis]

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 112/157 (71%), Positives = 134/157 (85%), Gaps = 2/157 (1%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
            ++K+ADFGLARAFG+PVR+YTHEVVTLWYRAPEVLLGS RYSCPVDVWS+GCIFAE+ T
Sbjct: 140 GVIKIADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSSRYSCPVDVWSLGCIFAEMVT 199

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
           ++PLF GDSEIDQLFRIFR LTTPTE+NWPGV++L DY+T FP+W+++ L   VK +D D
Sbjct: 200 KRPLFHGDSEIDQLFRIFRTLTTPTEENWPGVTQLQDYETNFPKWTDYNLANSVKQMDSD 259

Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
           GLDLL KTLIY P  RI+A+ ALKH YF   D++ LP
Sbjct: 260 GLDLLSKTLIYDPTRRISAKEALKHPYFDDLDRSTLP 296

Source: Eriocheir sinensis

Species: Eriocheir sinensis

Genus: Eriocheir

Family: Varunidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195457787|ref|XP_002075714.1| GK23499 [Drosophila willistoni] gi|194171799|gb|EDW86700.1| GK23499 [Drosophila willistoni]

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 120/194 (61%), Positives = 146/194 (75%), Gaps = 20/194 (10%)

Query: 6   QLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAF 50
           Q++ + V +Y  +IT      A SFC         +KP      K+ I+KVADFGL R+F
Sbjct: 99  QMDSKLVQSYLYQITN-----AISFCHRRRVLHRDLKPQNLLIDKNGIIKVADFGLGRSF 153

Query: 51  GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL 110
           G+PVRIYTHE+VTLWYRAPEVLLGS RYSCPVD+WSIGCIFAE+ATRKPLFQGDSEIDQL
Sbjct: 154 GIPVRIYTHEIVTLWYRAPEVLLGSHRYSCPVDIWSIGCIFAEMATRKPLFQGDSEIDQL 213

Query: 111 FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPA 170
           FR+FR+L TPTED WPGV+ LPDYK TFP WS   L   +KNLD +G+DL++K LIY P 
Sbjct: 214 FRMFRILKTPTEDIWPGVTSLPDYKNTFPRWSTNQLTNQLKNLDDNGIDLIQKMLIYDPV 273

Query: 171 TRINAENALKHKYF 184
            RI+A++ L+H +F
Sbjct: 274 HRISAKDILEHTFF 287

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|283854617|gb|ADB44904.1| Cdc2 kinase [Macrobrachium nipponense]

 Score =  249 bits (636), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 113/159 (71%), Positives = 132/159 (83%), Gaps = 2/159 (1%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +S ++K+ADFGLARAFG+PVR+YTHEVVTLWYRAPEVLLGS RYSCPVD+WS+GCIFAE+
Sbjct: 138 ESGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSSRYSCPVDIWSLGCIFAEM 197

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
            T++PLF GDSEIDQLFRIFR LTTPTEDNWPGV++L DYK  FP W+++ L   VK +D
Sbjct: 198 VTKRPLFHGDSEIDQLFRIFRTLTTPTEDNWPGVTQLQDYKANFPNWTDYNLANSVKQMD 257

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
            DGLDLL KTLIY P  RI A+ AL H YF   DK+ LP
Sbjct: 258 PDGLDLLSKTLIYDPTQRITAKEALNHPYFDDLDKSTLP 296

Source: Macrobrachium nipponense

Species: Macrobrachium nipponense

Genus: Macrobrachium

Family: Palaemonidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|202072069|gb|ACH95804.1| cell division cycle 2 [Galleria mellonella]

 Score =  248 bits (633), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 109/150 (72%), Positives = 131/150 (87%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K+ I+KVADFGL RAFGVPVR+YTHEVV LWYRAPEVLLGSQRYSCP+D+WS+GCIF E+
Sbjct: 138 KTGIIKVADFGLGRAFGVPVRVYTHEVVLLWYRAPEVLLGSQRYSCPIDIWSVGCIFFEM 197

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
           +++KPLFQGDSEIDQLFRIFR+L TPTE+ WPGVS LPDYK TFP W+ F L  HV+NLD
Sbjct: 198 SSKKPLFQGDSEIDQLFRIFRMLRTPTEEIWPGVSSLPDYKPTFPNWNTFNLHNHVQNLD 257

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + G+DLL+K LIY P  RI+A++A +H+YF
Sbjct: 258 EVGMDLLQKMLIYDPVKRISAKDARRHRYF 287

Source: Galleria mellonella

Species: Galleria mellonella

Genus: Galleria

Family: Pyralidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|407911902|gb|AFU50499.1| cell division cycle 2 protein [Cherax quadricarinatus]

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 111/159 (69%), Positives = 132/159 (83%), Gaps = 2/159 (1%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +  ++K+ADFGLARAFG+P+R+YTHEVVTLWYRAPEVLLGS RYSCPVDVWS+GCIFAE+
Sbjct: 138 EQGVIKIADFGLARAFGIPIRVYTHEVVTLWYRAPEVLLGSSRYSCPVDVWSLGCIFAEM 197

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
            T++PLF GDSEIDQLFRIFR LTTPTEDNWPGV++L DYK  FP+W+++ L   VK +D
Sbjct: 198 VTKRPLFHGDSEIDQLFRIFRTLTTPTEDNWPGVTQLQDYKANFPKWTDYNLANSVKQMD 257

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
             GLDLL KTLIY P  RI+A+  LKH YF   DK+ LP
Sbjct: 258 ASGLDLLSKTLIYDPTQRISAKEVLKHPYFDDLDKSALP 296

Source: Cherax quadricarinatus

Species: Cherax quadricarinatus

Genus: Cherax

Family: Parastacidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195053229|ref|XP_001993529.1| GH13856 [Drosophila grimshawi] gi|193900588|gb|EDV99454.1| GH13856 [Drosophila grimshawi]

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 115/161 (71%), Positives = 133/161 (82%), Gaps = 1/161 (0%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K+ I+KVADFGL R+FG+PVRIYTHE+VTLWYRAPEVLLGSQRYSCPVD+WSIGCIFAE+
Sbjct: 138 KNGIIKVADFGLGRSFGIPVRIYTHEIVTLWYRAPEVLLGSQRYSCPVDIWSIGCIFAEL 197

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
           ATRKPLFQGDSEIDQLFR+FR+L TPTED WPGV+ LPDYK TFP WS   L   +KNLD
Sbjct: 198 ATRKPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPDYKNTFPCWSTNQLTNQLKNLD 257

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYFAD-KTDLPKFA 194
            +G+DL++K LIY P  RI+A+  L+H YF   K DL   A
Sbjct: 258 ANGVDLIQKMLIYDPVNRISAKKILEHPYFNGFKIDLATSA 298

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	197
FB|FBgn0004106	297	cdc2 "cdc2" [Drosophila melano	0.903	0.599	0.638	5e-60
UNIPROTKB|F1NBD7	303	CDK1 "Cyclin-dependent kinase	0.842	0.547	0.662	1.2e-56
UNIPROTKB|P35567	302	cdk1-a "Cyclin-dependent kinas	0.842	0.549	0.668	3.3e-56
UNIPROTKB|Q9DG98	303	cdk1 "Cyclin-dependent kinase	0.781	0.508	0.705	4.2e-56
UNIPROTKB|Q9DGD3	303	cdk1 "Cyclin-dependent kinase	0.781	0.508	0.705	4.2e-56
UNIPROTKB|Q9DGA2	303	cdk1 "Cyclin-dependent kinase	0.781	0.508	0.705	5.3e-56
UNIPROTKB|P13863	303	CDK1 "Cyclin-dependent kinase	0.842	0.547	0.656	6.8e-56
UNIPROTKB|Q9DGA5	303	cdk1 "Cyclin-dependent kinase	0.781	0.508	0.698	6.8e-56
UNIPROTKB|P51958	302	cdk1 "Cyclin-dependent kinase	0.781	0.509	0.692	1.8e-55
MGI|MGI:88351	297	Cdk1 "cyclin-dependent kinase	0.817	0.542	0.666	1.8e-55

FB|FBgn0004106 cdc2 "cdc2" [Drosophila melanogaster (taxid:7227)]

 Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
 Identities = 120/188 (63%), Positives = 144/188 (76%)

Query:     7 LEWEQVGTYQVKITTR-LFLQATSFC---IKP------KSNIVKVADFGLARAFGVPVRI 56
             +E E V +Y  +IT+  LF          +KP      KS ++KVADFGL R+FG+PVRI
Sbjct:   100 MESELVRSYLYQITSAILFCHRRRVLHRDLKPQNLLIDKSGLIKVADFGLGRSFGIPVRI 159

Query:    57 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
             YTHE+VTLWYRAPEVLLGS RYSCPVD+WSIGCIFAE+ATRKPLFQGDSEIDQLFR+FR+
Sbjct:   160 YTHEIVTLWYRAPEVLLGSPRYSCPVDIWSIGCIFAEMATRKPLFQGDSEIDQLFRMFRI 219

Query:   117 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE 176
             L TPTED WPGV+ LPDYK TFP WS   L   +KNLD +G+DL++K LIY P  RI+A+
Sbjct:   220 LKTPTEDIWPGVTSLPDYKNTFPCWSTNQLTNQLKNLDANGIDLIQKMLIYDPVHRISAK 279

Query:   177 NALKHKYF 184
             + L+H YF
Sbjct:   280 DILEHPYF 287

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IGI

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IGI;ISS;NAS

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI;IMP

GO:0006468 "protein phosphorylation" evidence=NAS;IDA

GO:0007141 "male meiosis I" evidence=TAS

GO:0007283 "spermatogenesis" evidence=TAS

GO:0008315 "meiotic G2/MI transition" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0051726 "regulation of cell cycle" evidence=NAS

GO:0070816 "phosphorylation of RNA polymerase II C-terminal domain" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS

GO:0055059 "asymmetric neuroblast division" evidence=IMP;TAS

GO:0032880 "regulation of protein localization" evidence=IMP

GO:0007049 "cell cycle" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0009987 "cellular process" evidence=IMP

GO:0007140 "male meiosis" evidence=IMP

GO:0048142 "germarium-derived cystoblast division" evidence=IMP

GO:0007284 "spermatogonial cell division" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0006974 "response to DNA damage stimulus" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|F1NBD7 CDK1 "Cyclin-dependent kinase 1" [Gallus gallus (taxid:9031)]

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 112/169 (66%), Positives = 129/169 (76%)

Query:    25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
             L+  +  I  K  ++K+ADFGLARAFG+PVR+YTHEVVTLWYR+PEVLLGS RYS PVD+
Sbjct:   129 LKPQNLLIDDKG-VIKLADFGLARAFGIPVRVYTHEVVTLWYRSPEVLLGSARYSTPVDI 187

Query:    85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
             WSIG IFAE+AT+KPLF GDSEIDQLFRIFR L TP  D WP V  L DYK TFP+W   
Sbjct:   188 WSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNDVWPDVESLQDYKNTFPKWKPG 247

Query:   145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
              L  HV+NLD+DGLDLL K LIY PA RI+ + AL H YF   DK+ LP
Sbjct:   248 SLGTHVQNLDEDGLDLLSKMLIYDPAKRISGKMALNHPYFDDLDKSTLP 296

GO:0005524 "ATP binding" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005876 "spindle microtubule" evidence=IEA

GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0030544 "Hsp70 protein binding" evidence=IEA

GO:0034501 "protein localization to kinetochore" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

UNIPROTKB|P35567 cdk1-a "Cyclin-dependent kinase 1-A" [Xenopus laevis (taxid:8355)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 113/169 (66%), Positives = 129/169 (76%)

Query:    25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
             L+  +  I  K  ++K+ADFGLARAFG+PVR+YTHEVVTLWYRAPEVLLGS RYS PVDV
Sbjct:   129 LKPQNLLIDSKG-VIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDV 187

Query:    85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
             WSIG IFAEIAT+KPLF GDSEIDQLFRIFR L TP  + WP V  L DYK +FP+W   
Sbjct:   188 WSIGTIFAEIATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNSFPKWKGG 247

Query:   145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
              L  +VKN+D+DGLDLL K LIY PA RI+A  AL H YF   DK+ LP
Sbjct:   248 SLSANVKNIDKDGLDLLAKMLIYDPAKRISARKALLHPYFDDLDKSSLP 296

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q9DG98 cdk1 "Cyclin-dependent kinase 1" [Oryzias luzonensis (taxid:104659)]

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 110/156 (70%), Positives = 122/156 (78%)

Query:    38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
             ++K+ADFGLARAFGVPVR+YTHEVVTLWYRAPEVLLGS RYS PVDVWS G IFAE+AT+
Sbjct:   141 VIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATK 200

Query:    98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
             KPLF GDSEIDQLFRIFR L TP  D WP V  LPDYK TFP+W    L   VKNLD++G
Sbjct:   201 KPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWKGGSLSSMVKNLDKNG 260

Query:   158 LDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
             LDLL K LIY P  RI+A  A+ H YF   DK+ LP
Sbjct:   261 LDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLP 296

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

UNIPROTKB|Q9DGD3 cdk1 "Cyclin-dependent kinase 1" [Oryzias latipes (taxid:8090)]

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 110/156 (70%), Positives = 122/156 (78%)

Query:    38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
             ++K+ADFGLARAFGVPVR+YTHEVVTLWYRAPEVLLGS RYS PVDVWS G IFAE+AT+
Sbjct:   141 VIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATK 200

Query:    98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
             KPLF GDSEIDQLFRIFR L TP  D WP V  LPDYK TFP+W    L   VKNLD++G
Sbjct:   201 KPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWKEGSLSSMVKNLDKNG 260

Query:   158 LDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
             LDLL K LIY P  RI+A  A+ H YF   DK+ LP
Sbjct:   261 LDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLP 296

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

UNIPROTKB|Q9DGA2 cdk1 "Cyclin-dependent kinase 1" [Oryzias javanicus (taxid:123683)]

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 110/156 (70%), Positives = 122/156 (78%)

Query:    38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
             ++K+ADFGLARAFGVPVR+YTHEVVTLWYRAPEVLLGS RYS PVDVWS G IFAE+AT+
Sbjct:   141 VIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATK 200

Query:    98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
             KPLF GDSEIDQLFRIFR L TP  D WP V  LPDYK TFP+W    L   VKNLD++G
Sbjct:   201 KPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWMEGSLSSMVKNLDKNG 260

Query:   158 LDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
             LDLL K LIY P  RI+A  A+ H YF   DK+ LP
Sbjct:   261 LDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLP 296

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

UNIPROTKB|P13863 CDK1 "Cyclin-dependent kinase 1" [Gallus gallus (taxid:9031)]

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 111/169 (65%), Positives = 128/169 (75%)

Query:    25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
             L+  +  I  K  ++K+ADFGLARAFG+PVR+YTHEVVTLWYR+PEVLLGS  YS PVD+
Sbjct:   129 LKPQNLLIDDKG-VIKLADFGLARAFGIPVRVYTHEVVTLWYRSPEVLLGSALYSTPVDI 187

Query:    85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
             WSIG IFAE+AT+KPLF GDSEIDQLFRIFR L TP  D WP V  L DYK TFP+W   
Sbjct:   188 WSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNDVWPDVESLQDYKNTFPKWKPG 247

Query:   145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
              L  HV+NLD+DGLDLL K LIY PA RI+ + AL H YF   DK+ LP
Sbjct:   248 SLGTHVQNLDEDGLDLLSKMLIYDPAKRISGKMALNHPYFDDLDKSTLP 296

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0000724 "double-strand break repair via homologous recombination" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006281 "DNA repair" evidence=TAS

GO:0006302 "double-strand break repair" evidence=TAS

UNIPROTKB|Q9DGA5 cdk1 "Cyclin-dependent kinase 1" [Oryzias curvinotus (taxid:104658)]

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 109/156 (69%), Positives = 123/156 (78%)

Query:    38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
             ++K+ADFGL+RAFGVPVR+YTHEVVTLWYRAPEVLLGS RYS PVDVWS G IFAE+AT+
Sbjct:   141 VIKLADFGLSRAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATK 200

Query:    98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
             KPLF GDSEIDQLFRIFR L TP  D WP V  LPDYK+TFP+W    L   VKNLD++G
Sbjct:   201 KPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKSTFPKWKGGSLSSMVKNLDKNG 260

Query:   158 LDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
             LDLL K LIY P  RI+A  A+ H YF   DK+ LP
Sbjct:   261 LDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLP 296

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

UNIPROTKB|P51958 cdk1 "Cyclin-dependent kinase 1" [Carassius auratus (taxid:7957)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 108/156 (69%), Positives = 124/156 (79%)

Query:    38 IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
             ++K+ADFGLARAFGVPVR+YTHEVVTLWYRAPEVLLG+ RYS PVDVWSIG IFAE+AT+
Sbjct:   141 VIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGASRYSTPVDVWSIGTIFAELATK 200

Query:    98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
             KPLF GDSEIDQLFRIFR L TP  + WP V  LPDYK TFP+W +  L   VKNLD++G
Sbjct:   201 KPLFHGDSEIDQLFRIFRTLGTPNNEVWPDVESLPDYKNTFPKWKSGNLASTVKNLDKNG 260

Query:   158 LDLLEKTLIYCPATRINAENALKHKYF--ADKTDLP 191
             +DLL K LIY P  RI+A  A+ H YF   DK+ LP
Sbjct:   261 IDLLTKMLIYDPPKRISARQAMTHPYFDDLDKSTLP 296

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

MGI|MGI:88351 Cdk1 "cyclin-dependent kinase 1" [Mus musculus (taxid:10090)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 108/162 (66%), Positives = 125/162 (77%)

Query:    25 LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
             L+  +  I  K  I K+ADFGLARAFG+P+R+YTHEVVTLWYR+PEVLLGS RYS PVD+
Sbjct:   129 LKPQNLLIDDKGTI-KLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDI 187

Query:    85 WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
             WSIG IFAE+AT+KPLF GDSEIDQLFRIFR L TP  + WP V  L DYK TFP+W   
Sbjct:   188 WSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPG 247

Query:   145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
              L  HVKNLD++GLDLL K L+Y PA RI+ + ALKH YF D
Sbjct:   248 SLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYFDD 289

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005876 "spindle microtubule" evidence=ISO

GO:0006461 "protein complex assembly" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0006915 "apoptotic process" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IDA

GO:0007569 "cell aging" evidence=ISO

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=ISO

GO:0010243 "response to organic nitrogen" evidence=ISO

GO:0010628 "positive regulation of gene expression" evidence=ISO

GO:0016301 "kinase activity" evidence=IDA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016572 "histone phosphorylation" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030261 "chromosome condensation" evidence=ISO

GO:0030332 "cyclin binding" evidence=ISO

GO:0030496 "midbody" evidence=ISO

GO:0030544 "Hsp70 protein binding" evidence=IPI

GO:0031100 "organ regeneration" evidence=ISO

GO:0033160 "positive regulation of protein import into nucleus, translocation" evidence=ISO

GO:0034501 "protein localization to kinetochore" evidence=ISO

GO:0035173 "histone kinase activity" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0045471 "response to ethanol" evidence=ISO

GO:0045740 "positive regulation of DNA replication" evidence=ISO

GO:0045931 "positive regulation of mitotic cell cycle" evidence=ISO

GO:0051301 "cell division" evidence=IEA

GO:0060045 "positive regulation of cardiac muscle cell proliferation" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q00646	CDK1_EMENI	2, ., 7, ., 1, 1, ., 2, 3	0.5265	0.8781	0.5356	yes	N/A
P39951	CDK1_RAT	2, ., 7, ., 1, 1, ., 2, 3	0.6179	0.8274	0.5488	yes	N/A
P48734	CDK1_BOVIN	2, ., 7, ., 1, 1, ., 2, 3	0.6179	0.8274	0.5488	yes	N/A
P34556	CDK1_CAEEL	2, ., 7, ., 1, 1, ., 2, 3	0.5728	0.8883	0.5271	yes	N/A
P23572	CDK1_DROME	2, ., 7, ., 1, 1, ., 2, 3	0.6237	0.8832	0.5858	yes	N/A
P24100	CDKA1_ARATH	2, ., 7, ., 1, 1, ., 2, 3	0.6107	0.8477	0.5680	yes	N/A
P11440	CDK1_MOUSE	2, ., 7, ., 1, 1, ., 2, 3	0.6054	0.8629	0.5723	yes	N/A
P06493	CDK1_HUMAN	2, ., 7, ., 1, 1, ., 2, 3	0.6179	0.8274	0.5488	yes	N/A
P29618	CDKA1_ORYSJ	2, ., 7, ., 1, 1, ., 2, 3	0.6296	0.8223	0.5510	yes	N/A
P04551	CDK1_SCHPO	2, ., 7, ., 1, 1, ., 2, 3	0.5802	0.8172	0.5420	yes	N/A
P34112	CDK1_DICDI	2, ., 7, ., 1, 1, ., 2, 3	0.5921	0.7715	0.5135	yes	N/A
P13863	CDK1_CHICK	2, ., 7, ., 1, 1, ., 2, 3	0.5841	0.9137	0.5940	yes	N/A
P00546	CDK1_YEAST	2, ., 7, ., 1, 1, ., 2, 2	0.5802	0.8172	0.5402	yes	N/A
Q5RCH1	CDK1_PONAB	2, ., 7, ., 1, 1, ., 2, 3	0.6179	0.8274	0.5488	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	197
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-101
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	6e-96
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	8e-93
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-84
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	8e-84
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-72
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-70
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-69
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	9e-67
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	4e-66
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-65
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-62
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-61
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	6e-60
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	5e-58
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	7e-58
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	7e-54
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-52
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-52
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-50
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-50
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-50
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-50
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-48
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-45
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-43
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-43
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-42
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-42
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	4e-41
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-40
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-39
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	7e-39
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-38
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	6e-38
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-37
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-36
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-35
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-35
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-35
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-34
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-34
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	1e-31
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-31
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-31
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	4e-31
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	6e-30
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	6e-30
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	5e-27
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	6e-27
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-26
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	3e-26
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	8e-26
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-24
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-23
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	4e-22
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-21
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	9e-20
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-17
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-17
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-16
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-12
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	5e-12
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-11
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-11
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	7e-11
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-09
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-09
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	5e-09
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-08
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-08
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-08
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	7e-08
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	8e-08
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-07
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-07
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	6e-07
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	7e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	8e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	9e-07
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-06
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-06
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-06
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-06
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-06
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-06
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-06
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-06
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-06
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-06
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	4e-06
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	4e-06
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	7e-06
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	7e-06
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-05
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-05
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-05
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-05
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-05
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-05
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	4e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	5e-05
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-05
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	6e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	6e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	7e-05
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	7e-05
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-04
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-04
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	4e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	4e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	5e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-04
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-04
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	6e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	6e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	7e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	7e-04
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	8e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	9e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	0.001
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.001
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.001
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.001
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.001
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.001
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	0.001
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.002
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.002
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	0.002
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	0.002
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	0.002
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.002
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.002
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.002
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.002
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.002
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	0.002
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	0.002
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	0.002
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.002
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.002
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	0.003
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.004
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	0.004
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	0.004

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  293 bits (751), Expect = e-101
 Identities = 120/183 (65%), Positives = 135/183 (73%), Gaps = 15/183 (8%)

Query: 17  VKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEV 61
           VK      LQ   FC         +KP         ++K+ADFGLARAFG+PVR+YTHEV
Sbjct: 103 VKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEV 162

Query: 62  VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 121
           VTLWYRAPEVLLGS RYS PVD+WSIG IFAE+AT+KPLF GDSEIDQLFRIFR+L TPT
Sbjct: 163 VTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPT 222

Query: 122 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
           ED WPGV+ LPDYK TFP+W    L   VKNLD+DGLDLLEK LIY PA RI+A+ AL H
Sbjct: 223 EDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282

Query: 182 KYF 184
            YF
Sbjct: 283 PYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  279 bits (717), Expect = 6e-96
 Identities = 112/175 (64%), Positives = 132/175 (75%), Gaps = 15/175 (8%)

Query: 25  LQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAP 69
           LQ  ++C         +KP      +   +K+ADFGLARAFGVPVR YTHEVVTLWYRAP
Sbjct: 109 LQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAP 168

Query: 70  EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
           E+LLGS++YS PVD+WSIGCIFAE+  R+PLF GDSEIDQLFRIFR L TP ED WPGV+
Sbjct: 169 EILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVT 228

Query: 130 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
            LPDYK TFP+W+   L K V NLD+DGLDLL K L+Y PA RI+A+ AL+H YF
Sbjct: 229 SLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  272 bits (697), Expect = 8e-93
 Identities = 104/184 (56%), Positives = 134/184 (72%), Gaps = 15/184 (8%)

Query: 16  QVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHE 60
            +K      L+  ++C         +KP      +  ++K+ADFGLARAFG+P+R YTHE
Sbjct: 99  LIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158

Query: 61  VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           VVTLWYRAPE+LLGS+ YS  VD+WS+GCIFAE+ T KPLF GDSEIDQLF+IF++L TP
Sbjct: 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTP 218

Query: 121 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 180
           TE++WPGV+KLPDYK TFP++    L+K +  LD +G+DLL K L Y PA RI+A+ ALK
Sbjct: 219 TEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278

Query: 181 HKYF 184
           H YF
Sbjct: 279 HPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  250 bits (640), Expect = 2e-84
 Identities = 103/190 (54%), Positives = 127/190 (66%), Gaps = 15/190 (7%)

Query: 10  EQVGTYQVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPV 54
             +    +K      LQ  +FC         +KP++ ++      K+ADFGLARAFGVPV
Sbjct: 95  SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154

Query: 55  RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
           R YTHEVVTLWYRAPE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIF
Sbjct: 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 214

Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN 174
           R L TP E  WPGV+ LPDYK +FP+W+     K V  LD+DG DLL + L Y P  RI+
Sbjct: 215 RTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS 274

Query: 175 AENALKHKYF 184
           A+ AL H +F
Sbjct: 275 AKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  249 bits (637), Expect = 8e-84
 Identities = 99/167 (59%), Positives = 125/167 (74%)

Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+  +  I  ++N +K+ADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS+ YS PVD+
Sbjct: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDI 187

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+GCIFAE+  +KPLF GDSEID+LF+IFR+L TP E+ WPGV+ LPDYK+ FP+W   
Sbjct: 188 WSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPK 247

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
            L   V  L+  G+DLL K L   P+ RI A  AL+H+YF D  D P
Sbjct: 248 DLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGDAP 294

Length = 294

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  220 bits (563), Expect = 2e-72
 Identities = 85/150 (56%), Positives = 108/150 (72%), Gaps = 3/150 (2%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           I+K+ DFGLAR +G P++ YT  VVTLWYRAPE+LLG++ YS  +D+WS+GCIFAE+ T+
Sbjct: 144 ILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTK 203

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKN--LD 154
           KPLF G SEIDQL +IF++L TPTE  WPG S+LP  K  TF ++    L K      L 
Sbjct: 204 KPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLS 263

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
            +G DLL + L Y PA RI+AE+ALKH YF
Sbjct: 264 DNGFDLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  215 bits (549), Expect = 2e-70
 Identities = 89/148 (60%), Positives = 112/148 (75%), Gaps = 1/148 (0%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
            ++K+AD GL RAF +PV+ YTHE+VTLWYRAPEVLLGS  YS PVD+WS+GCIFAE++ 
Sbjct: 148 GLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSR 207

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
           ++PLF GDSE+ QL  IF++L TPTE  WPGVSKL D+   FP+W    L + V +L  +
Sbjct: 208 KQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWH-EFPQWKPQDLSRAVPDLSPE 266

Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF 184
           GLDLL+K L Y PA RI+A+ AL H YF
Sbjct: 267 GLDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  213 bits (544), Expect = 2e-69
 Identities = 80/160 (50%), Positives = 102/160 (63%), Gaps = 7/160 (4%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           ++K+ADFGLAR+FG P R  TH+VVT WYRAPE+L G++ Y   VD+WS+GCIFAE+  R
Sbjct: 140 VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLR 199

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
            P   GDS+IDQL +IF  L TPTE+NWPGV+ LPDY   F  +    L +       D 
Sbjct: 200 VPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDY-VEFKPFPPTPLKQIFPAASDDA 258

Query: 158 LDLLEKTLIYCPATRINAENALKHKYFA------DKTDLP 191
           LDLL++ L   P  RI A  AL+H YF+        + LP
Sbjct: 259 LDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTPPSQLP 298

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  205 bits (524), Expect = 9e-67
 Identities = 92/177 (51%), Positives = 113/177 (63%), Gaps = 18/177 (10%)

Query: 25  LQATSFC---------IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
           LQ  +FC         +KP  N+       +K+ADFGLAR+FG PVR YTH VVT WYRA
Sbjct: 108 LQGLAFCHSHGILHRDLKP-ENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRA 166

Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS PVD+WS+GCIFAE+ +R+PLF G SEIDQLF+IFR L TP  + WP  
Sbjct: 167 PELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKF 226

Query: 129 SKLP-DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + L  +YK +FP+ +   L K   N     LDLL + L Y P  RI AE AL H YF
Sbjct: 227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  204 bits (520), Expect = 4e-66
 Identities = 89/176 (50%), Positives = 116/176 (65%), Gaps = 16/176 (9%)

Query: 25  LQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTHEVVTLWYRAP 69
           L+  +FC         +KP++ ++      K+ADFGLARAFG+PVR Y+ EVVTLWYR P
Sbjct: 109 LKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPP 168

Query: 70  EVLLGSQRYSCPVDVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           +VL G++ YS  +D+WS GCIFAE+A   +PLF G+   DQL RIFR+L TPTE++WPGV
Sbjct: 169 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGV 228

Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           SKLPDYK      +   L   V  L+  G DLL+  L+  P  RI+AE AL+H YF
Sbjct: 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  201 bits (514), Expect = 3e-65
 Identities = 87/184 (47%), Positives = 122/184 (66%), Gaps = 15/184 (8%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTHE 60
            VK  T   L+  +FC         +KP++ ++      K+ADFGLARAFG+PV  +++E
Sbjct: 101 TVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNE 160

Query: 61  VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           VVTLWYRAP+VLLGS+ YS  +D+WS+GCI AE+ T +PLF G +  DQL +IFR++ TP
Sbjct: 161 VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTP 220

Query: 121 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 180
           TE  WPG+S+LP+YK TFP +    L +   + D  G+DLL + L   P  RI+A +AL+
Sbjct: 221 TESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280

Query: 181 HKYF 184
           H +F
Sbjct: 281 HPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  194 bits (495), Expect = 3e-62
 Identities = 80/187 (42%), Positives = 118/187 (63%), Gaps = 19/187 (10%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNI-------VKVADFGLARAFGVP-VRIYT 58
           QVK   R+ L+  ++          +KP +N+       +K+ADFGLAR F     R+Y+
Sbjct: 100 QVKSYMRMLLKGVAYMHANGIMHRDLKP-ANLLISADGVLKIADFGLARLFSEEEPRLYS 158

Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLT 118
           H+V T WYRAPE+L G+++Y   VD+W++GCIFAE+    PLF G+++I+QL  +FR L 
Sbjct: 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLG 218

Query: 119 TPTEDNWPGVSKLPDY-KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAEN 177
           TP E+ WPG++ LPDY K TFPE     L++   +   + LDLL+  L+Y P+ R++A  
Sbjct: 219 TPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAE 278

Query: 178 ALKHKYF 184
           AL+H YF
Sbjct: 279 ALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  191 bits (489), Expect = 2e-61
 Identities = 78/188 (41%), Positives = 111/188 (59%), Gaps = 20/188 (10%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNI-------VKVADFGLARAF-GVPVRIYT 58
           Q+K   +  L+   +          IK  SNI       +K+ADFGLAR +       YT
Sbjct: 101 QIKCYMKQLLEGLQYLHSNGILHRDIKG-SNILINNDGVLKLADFGLARPYTKRNSADYT 159

Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLT 118
           + V+TLWYR PE+LLG+ RY   VD+WS+GCI AE+   KP+FQG +E++QL +IF +  
Sbjct: 160 NRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCG 219

Query: 119 TPTEDNWPGVSKLPDYKTTFP--EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE 176
           +PT++NWPGVSKLP ++   P   +     +     +D   LDLL+K L   P  RI+A+
Sbjct: 220 SPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISAD 279

Query: 177 NALKHKYF 184
            AL+H+YF
Sbjct: 280 QALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  188 bits (480), Expect = 6e-60
 Identities = 74/146 (50%), Positives = 100/146 (68%), Gaps = 4/146 (2%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ADFGLAR +   + + T  VVTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+  R+
Sbjct: 146 VKIADFGLARIYSFEMAL-TSVVVTLWYRAPEVLLQSS-YATPVDMWSVGCIFAELFRRR 203

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           PLF+G SE DQL +IF V+  P+E+ WP    LP  +++FP ++       V  + ++GL
Sbjct: 204 PLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLP--RSSFPSYTPRSFKSFVPEICEEGL 261

Query: 159 DLLEKTLIYCPATRINAENALKHKYF 184
           DLL+K L + P  RI+A  AL+H YF
Sbjct: 262 DLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score =  183 bits (467), Expect = 5e-58
 Identities = 80/149 (53%), Positives = 103/149 (69%), Gaps = 4/149 (2%)

Query: 40  KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKP 99
           K+ADFGLARA  VP + Y++EVVTLWYR P+VLLGS  YS  +D+W +GCIF E+AT +P
Sbjct: 143 KLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRP 202

Query: 100 LFQGDSEI-DQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQ-- 155
           LF G +++ DQL +IFRVL TPTE+ WPGVS  P++K  +FP +    L  H   LD+  
Sbjct: 203 LFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIP 262

Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYF 184
            G +L  K L Y P  RI+A  A+KH YF
Sbjct: 263 HGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  184 bits (469), Expect = 7e-58
 Identities = 83/177 (46%), Positives = 103/177 (58%), Gaps = 21/177 (11%)

Query: 35  KSNIVKVADFGLARAFGVPV--------------RIYTHEVVTLWYRAPEVLLGSQRYSC 80
              I K+ADFGLAR +G P                  T +VVTLWYRAPE+L+G+++Y  
Sbjct: 154 SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHF 213

Query: 81  PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 140
            VD+WS+GCIFAE+ T KPLF G++EIDQL RIF +L TP EDNWP   KLP Y T F  
Sbjct: 214 AVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLY-TEFTP 272

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF------ADKTDLP 191
                L     N   D +DLL+  L   P  RI+A+ ALKH+YF       D + LP
Sbjct: 273 RKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPCDPSQLP 329

Length = 335

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score =  172 bits (438), Expect = 7e-54
 Identities = 82/186 (44%), Positives = 119/186 (63%), Gaps = 16/186 (8%)

Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTH 59
           + VKI     L+  S+C         +KP++ ++      K+ADFGLARA  VP + Y++
Sbjct: 103 HNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSN 162

Query: 60  EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 119
           EVVTLWYR P+VLLGS  YS P+D+W +GCI  E+AT +P+F G +  ++L  IFR+L T
Sbjct: 163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGT 222

Query: 120 PTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
           PTE+ WPG++   ++++  FP++    L  H   LD DG+DLL   L+Y   +RI+AE A
Sbjct: 223 PTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAA 282

Query: 179 LKHKYF 184
           L+H YF
Sbjct: 283 LRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  170 bits (433), Expect = 1e-52
 Identities = 71/151 (47%), Positives = 92/151 (60%), Gaps = 1/151 (0%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
            +K+ADFGLAR +G+P +  T +VVTLWYRAPE+LLG   Y+  +D+W++GCI AE+   
Sbjct: 146 CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAH 205

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQD 156
           KPL  G SEI+QL  I ++L TP E  WPG S LP     T P+     L      L + 
Sbjct: 206 KPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEA 265

Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADK 187
           GL LL   L+Y P  R  AE AL+  YF +K
Sbjct: 266 GLRLLNFLLMYDPKKRATAEEALESSYFKEK 296

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score =  169 bits (431), Expect = 3e-52
 Identities = 73/171 (42%), Positives = 97/171 (56%), Gaps = 20/171 (11%)

Query: 34  PKSNIVKVADFGLARAFGVPVRIYTHE---VVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
           P+  +VK+ D GLAR F  P++        VVT+WYRAPE+LLG++ Y+  +D+W+IGCI
Sbjct: 146 PERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCI 205

Query: 91  FAEIATRKPLFQGDSE---------IDQLFRIFRVLTTPTEDNWPGVSKLPDYKT----T 137
           FAE+ T +P+F+G             DQL RIF VL TPTE +WP + K+P+Y T     
Sbjct: 206 FAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDF 265

Query: 138 FPEWSNFCL----DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
             +           +  K  D  G DLL K L Y P  RI AE AL+H YF
Sbjct: 266 KTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  166 bits (422), Expect = 1e-50
 Identities = 76/181 (41%), Positives = 97/181 (53%), Gaps = 16/181 (8%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCP 81
           +KP SNI       +K+ DFGLAR            T  VVT WYRAPE+LL S RY+  
Sbjct: 129 LKP-SNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKA 187

Query: 82  VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED--NWPGVSKLPDYKTTFP 139
           +D+WS+GCIFAE+ TRKPLF G   IDQL  I  VL TP+E+   +    K  +Y  + P
Sbjct: 188 IDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLP 247

Query: 140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
           +     L K       + +DLLEK L++ P  RI A+ AL H Y A   D  D P     
Sbjct: 248 KKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAKPP 307

Query: 197 Y 197
           +
Sbjct: 308 F 308

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score =  165 bits (419), Expect = 1e-50
 Identities = 83/186 (44%), Positives = 117/186 (62%), Gaps = 16/186 (8%)

Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTH 59
           + VKI     L+  ++C         +KP++ ++      K+ADFGLARA  VP + Y++
Sbjct: 104 HNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSN 163

Query: 60  EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 119
           EVVTLWYR P+VLLGS  YS  +D+W +GCIF E+A+ +PLF G +  D+L  IFR+L T
Sbjct: 164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGT 223

Query: 120 PTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
           PTE+ WPG+S   ++K   FP++    L  H   LD +G++LL K L Y    RI+AE A
Sbjct: 224 PTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEA 283

Query: 179 LKHKYF 184
           +KH YF
Sbjct: 284 MKHAYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score =  164 bits (416), Expect = 2e-50
 Identities = 79/189 (41%), Positives = 118/189 (62%), Gaps = 16/189 (8%)

Query: 12  VGTYQVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRI 56
           +  + VK+     L+  ++C         +KP++ ++      K+ADFGLARA  +P + 
Sbjct: 101 INMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160

Query: 57  YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
           Y++EVVTLWYR P++LLGS  YS  +D+W +GCIF E++T +PLF G +  +QL  IFR+
Sbjct: 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRI 220

Query: 117 LTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA 175
           L TPTE+ WPG+    ++K+  +P++   CL  H   LD DG +LL K L +    RI+A
Sbjct: 221 LGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA 280

Query: 176 ENALKHKYF 184
           E A+KH YF
Sbjct: 281 EEAMKHPYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  164 bits (418), Expect = 2e-50
 Identities = 74/160 (46%), Positives = 99/160 (61%), Gaps = 14/160 (8%)

Query: 38  IVKVADFGLARAF-----------GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWS 86
           I+K+ADFGLAR +           G   R YT+ VVT WYR PE+LLG +RY+  VD+W 
Sbjct: 153 ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWG 212

Query: 87  IGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT--TFPEWSNF 144
           IGC+FAE+ TR+P+ QG S+IDQL  IF++  TPTE+ WPG   LP  +   +F  +   
Sbjct: 213 IGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPR- 271

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
            L++    L  +GLDLL K L   P  R+ A +AL+H YF
Sbjct: 272 TLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  157 bits (400), Expect = 6e-48
 Identities = 72/163 (44%), Positives = 97/163 (59%), Gaps = 14/163 (8%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           +KP         +VK+ADFGLAR     +R    YT  V T WYRAPE+LL S  YS PV
Sbjct: 125 LKPENLLVSGPEVVKIADFGLAR----EIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPV 180

Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP-DYKTTFPEW 141
           D+W++GCI AE+ T +PLF G SEIDQL++I  VL TPT+ +WP   KL       FP++
Sbjct: 181 DIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQF 240

Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +   L + + N   + +DL++  L + P  R  A  AL+H YF
Sbjct: 241 APTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  151 bits (383), Expect = 3e-45
 Identities = 70/161 (43%), Positives = 95/161 (59%), Gaps = 15/161 (9%)

Query: 35  KSNIVKVADFGLARAFGVPVR----IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
           K  I+K+ADFGLARAF +        YT+ VVTLWYR PE+LLG + Y  P+D+W  GCI
Sbjct: 154 KDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCI 213

Query: 91  FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT-FPEWSNFCLDKH 149
            AE+ TR P+ QG++E  QL  I ++  + T + WPGV KL  +K    P+       + 
Sbjct: 214 MAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQ----GQKRK 269

Query: 150 VK------NLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           VK        D   LDL++K L+  PA RI+A+ AL H +F
Sbjct: 270 VKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score =  147 bits (371), Expect = 1e-43
 Identities = 74/153 (48%), Positives = 99/153 (64%), Gaps = 10/153 (6%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFGLARA  +P + Y+ EVVTLWYR P+VLLG+  YS  +D+W  GCIF E+   +
Sbjct: 142 LKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQ 201

Query: 99  PLFQGDSEI-DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV----KNL 153
           P F G S++ +QL +I+ VL  PTED WPGVSKLP+YK   PEW   C  + +    K L
Sbjct: 202 PAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYK---PEWFLPCKPQQLRVVWKRL 258

Query: 154 DQ--DGLDLLEKTLIYCPATRINAENALKHKYF 184
            +     DL  + L+  P  RI+A++AL H YF
Sbjct: 259 SRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score =  146 bits (370), Expect = 1e-43
 Identities = 70/146 (47%), Positives = 93/146 (63%), Gaps = 4/146 (2%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ADFGLAR +   + + T  VVTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+  RK
Sbjct: 147 VKLADFGLARIYSCQMAL-TPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRK 204

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           PLF G+SE DQL +IF ++  P ED+WP    LP  +  F       +   V  +++ G 
Sbjct: 205 PLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP--RGAFSPRGPRPVQSVVPEIEESGA 262

Query: 159 DLLEKTLIYCPATRINAENALKHKYF 184
            LL + L + P  RI+A  AL+H +F
Sbjct: 263 QLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  145 bits (368), Expect = 1e-42
 Identities = 69/176 (39%), Positives = 94/176 (53%), Gaps = 29/176 (16%)

Query: 32  IKPKSNI-------VKVADFGLARAF-----GVPVRIYTHEVVTLWYRAPEVLLGSQRYS 79
           +KP SNI       VK+ADFGLAR+           + T  V T WYRAPE+LLGS RY+
Sbjct: 133 LKP-SNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYT 191

Query: 80  CPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDN---------WPGVSK 130
             VD+WS+GCI  E+   KPLF G S ++QL +I  V+  P+ ++            +  
Sbjct: 192 KGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDS 251

Query: 131 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
           LP  +   P      LD+ +     D LDLL+K L++ P  R+ AE AL+H Y A 
Sbjct: 252 LPS-RPRKP------LDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  143 bits (362), Expect = 1e-42
 Identities = 59/160 (36%), Positives = 76/160 (47%), Gaps = 30/160 (18%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP  NI       VK+ADFGLA+         T  V T WY APEVLLG   Y   VDV
Sbjct: 124 LKP-ENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDV 182

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+G I  E+ T KP F G++ +DQL  I R+L  P E + P  S   +           
Sbjct: 183 WSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSE----------- 231

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                      +  DL++K L   P+ R  AE  L+H +F
Sbjct: 232 -----------EAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  140 bits (355), Expect = 4e-41
 Identities = 66/157 (42%), Positives = 89/157 (56%), Gaps = 9/157 (5%)

Query: 36  SNI-------VKVADFGLARAFGV-PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSI 87
           SNI       +K+ADFGLAR +     R YT++V+TLWYR PE+LLG +RY   +DVWS 
Sbjct: 145 SNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 204

Query: 88  GCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS-NFCL 146
           GCI  E+ T+KP+FQ + E+ QL  I R+  +P    WP V KLP + T  P+      L
Sbjct: 205 GCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRL 264

Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
            +    +    LDLL+  L   P+ R  AE AL   +
Sbjct: 265 REEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  139 bits (352), Expect = 2e-40
 Identities = 65/179 (36%), Positives = 92/179 (51%), Gaps = 16/179 (8%)

Query: 32  IKPKSNI-------VKVADFGLAR---AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP 81
           +KP SN+       +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  
Sbjct: 132 LKP-SNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKA 190

Query: 82  VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV--SKLPDYKTTFP 139
           +D+WS+GCI AE+ + +PLF G   + QL  I  VL TP++++   +   +  +Y  + P
Sbjct: 191 IDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLP 250

Query: 140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAE 195
                  +K   N D   LDLL+K L + P  RI  E AL H Y     D +D P   E
Sbjct: 251 FKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVAEE 309

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  134 bits (340), Expect = 4e-39
 Identities = 66/159 (41%), Positives = 88/159 (55%), Gaps = 8/159 (5%)

Query: 32  IKP-----KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           IKP     K +I+K+ADFG  R  G+  +  YT  + T WYRAPE LL    Y   +D+W
Sbjct: 126 IKPENILIKDDILKLADFGSCR--GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIW 183

Query: 86  SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
           ++GC+F EI +  PLF G +E+DQ+ +I  VL TP  +      K       FP      
Sbjct: 184 AVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTG 243

Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           L K + N   +GLDLL+K L Y P  RI A+ AL+H YF
Sbjct: 244 LRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score =  134 bits (339), Expect = 7e-39
 Identities = 74/152 (48%), Positives = 92/152 (60%), Gaps = 4/152 (2%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFGLARA  VP   Y++EVVTLWYR P+VLLGS  YS  +D+W +GCIF E+    
Sbjct: 142 LKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGV 201

Query: 99  PLFQGDSEI-DQLFRIFRVLTTPTEDNWPGVSKLPDYKTT-FPEWSNFCLDKHVKNLD-- 154
             F G  +I DQL RIF VL TP ED WPGV  LP +K   F  +S   L +    L   
Sbjct: 202 AAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYV 261

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
               DL  K L   P  R++A+ AL H+YF+D
Sbjct: 262 NHAEDLASKLLQCFPKNRLSAQAALSHEYFSD 293

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score =  133 bits (337), Expect = 1e-38
 Identities = 74/146 (50%), Positives = 98/146 (67%), Gaps = 4/146 (2%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFGLAR +   +   T  VVTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+  RK
Sbjct: 149 IKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRK 206

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           PLF+G S++DQL +I  V+  P E++WP    LP  +  F   S   ++K V ++D+ G 
Sbjct: 207 PLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDELGK 264

Query: 159 DLLEKTLIYCPATRINAENALKHKYF 184
           DLL K L + PA RI+A +AL H YF
Sbjct: 265 DLLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  132 bits (333), Expect = 6e-38
 Identities = 68/187 (36%), Positives = 91/187 (48%), Gaps = 19/187 (10%)

Query: 17  VKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAF-GVPVRIYTHE 60
           V+      LQA ++C         IKP      +S ++K+ DFG ARA    P    T  
Sbjct: 102 VRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDY 161

Query: 61  VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           V T WYRAPE+L+G   Y  PVDVW+IGCI AE+   +PLF GDS+IDQL+ I + L   
Sbjct: 162 VATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPL 221

Query: 121 TEDNWPGVSKLPDYKT-TFPEWSNFCLDKH--VKNLDQDGLDLLEKTLIYCPATRINAEN 177
              +    S  P +    FPE S     +      +    LD L+  L   P  R+  + 
Sbjct: 222 PPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDE 281

Query: 178 ALKHKYF 184
            L+H YF
Sbjct: 282 LLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  129 bits (327), Expect = 2e-37
 Identities = 54/159 (33%), Positives = 75/159 (47%), Gaps = 33/159 (20%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           +KP      +   VK+ADFGLAR      ++ T  V T  Y APEVLLG + Y   VD+W
Sbjct: 123 LKPENILLDEDGHVKLADFGLARQLDPGEKLTT-FVGTPEYMAPEVLLG-KGYGKAVDIW 180

Query: 86  SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
           S+G I  E+ T KP F GD ++ +LF+                   P      PEW    
Sbjct: 181 SLGVILYELLTGKPPFPGDDQLLELFKKIG---------------KPKPPFPPPEW---- 221

Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 ++  +  DL+ K L+  P  R+ AE AL+H +F
Sbjct: 222 ------DISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score =  129 bits (326), Expect = 2e-36
 Identities = 68/166 (40%), Positives = 91/166 (54%), Gaps = 12/166 (7%)

Query: 32  IKPKSNIV------KVADFGLARAF----GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP 81
           +KP + +V      K+ DFGLAR F    G      T  V T WYRAPE++L  Q Y+  
Sbjct: 131 LKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKA 190

Query: 82  VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP--GVSKLPDYKTTFP 139
           +DVWS+GCI AE+  RKP+F+G   +DQL +I +VL TP E+     G  K  +Y  + P
Sbjct: 191 IDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLP 250

Query: 140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 185
                  +    N +   LDLLEK L + P  RI+ E AL+H Y A
Sbjct: 251 NIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA 296

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  127 bits (320), Expect = 1e-35
 Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 14/167 (8%)

Query: 32  IKPKSNIV-------KVADFGLARA---FGVPVRIY-THEVVTLWYRAPEVLLGSQRYSC 80
           +KP SN++       ++ DFG+AR         + + T  V T WYRAPE+LL    Y+ 
Sbjct: 133 LKP-SNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTT 191

Query: 81  PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED--NWPGVSKLPDYKTTF 138
            +D+WS+GCIFAE+  R+ LF G + + QL  I  VL +P+E+  N  G  ++  Y    
Sbjct: 192 AIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNL 251

Query: 139 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 185
           P        K       + LDLL + L + P  RI  E AL+H + A
Sbjct: 252 PRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA 298

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score =  126 bits (319), Expect = 2e-35
 Identities = 63/157 (40%), Positives = 85/157 (54%), Gaps = 5/157 (3%)

Query: 40  KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKP 99
           K+ DFGLAR         T  VVT WYRAPE+LL    Y+  +DVWS+GCIFAE+  RKP
Sbjct: 148 KICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKP 207

Query: 100 LFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
           LF G   + QL  I  +L +P+E++   +   K   Y  + P        +   + +   
Sbjct: 208 LFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLA 267

Query: 158 LDLLEKTLIYCPATRINAENALKHKYFA---DKTDLP 191
           +DLLEK L++ P+ RI  E AL H Y A   D +D P
Sbjct: 268 IDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEP 304

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  124 bits (314), Expect = 3e-35
 Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 29/183 (15%)

Query: 25  LQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAP 69
           L+   FC         IKP      +S +VK+ DFG AR    P  +YT  V T WYRAP
Sbjct: 110 LRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAP 169

Query: 70  EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTE------- 122
           E+L+G  +Y   VD+W++GC+  E+ T +PLF GDS+IDQL+ I + L            
Sbjct: 170 ELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQ 229

Query: 123 DNWPGVS-KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
            N      +LP+ K   P      L+K    L    LDL ++ L   P  R ++   L H
Sbjct: 230 KNPLFAGMRLPEVKEIEP------LEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283

Query: 182 KYF 184
           ++F
Sbjct: 284 EFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  123 bits (311), Expect = 1e-34
 Identities = 68/193 (35%), Positives = 96/193 (49%), Gaps = 31/193 (16%)

Query: 16  QVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHE 60
            +K      LQA +FC         +KP      K   +K+ DFG AR    P   YT  
Sbjct: 101 LIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY 160

Query: 61  VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT- 119
           V T WYRAPE+L+G  +Y  PVDVW+IGC+FAE+ T +PL+ G S++DQL+ I + L   
Sbjct: 161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDL 220

Query: 120 --------PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPAT 171
                    T   + G+S +P+ +T  P      L+    N+    L  L+  L   P  
Sbjct: 221 IPRHQQIFSTNQFFKGLS-IPEPETREP------LESKFPNISSPALSFLKGCLQMDPTE 273

Query: 172 RINAENALKHKYF 184
           R++ E  L+H YF
Sbjct: 274 RLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score =  123 bits (311), Expect = 3e-34
 Identities = 71/191 (37%), Positives = 90/191 (47%), Gaps = 44/191 (23%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNI       +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+
Sbjct: 144 LKP-SNIAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 199

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED-----------NWPGVSKLP- 132
           WS+GCI AE+ T K LF G   IDQL RI  ++ TP E+           N+  +  LP 
Sbjct: 200 WSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNY--IQSLPQ 257

Query: 133 ----DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA--- 185
               D+K  F               +   +DLLEK L+  P  RI A  AL H Y A   
Sbjct: 258 MPKKDFKEVFS------------GANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYH 305

Query: 186 DKTDLPKFAEY 196
           D  D P    Y
Sbjct: 306 DPEDEPVAPPY 316

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score =  116 bits (291), Expect = 1e-31
 Identities = 64/172 (37%), Positives = 93/172 (54%), Gaps = 21/172 (12%)

Query: 34  PKSNIVKVADFGLARAFGVPVRIYTH---EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
           P+   VK+AD G AR F  P++        VVT WYRAPE+LLG++ Y+  +D+W+IGCI
Sbjct: 146 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI 205

Query: 91  FAEIATRKPLFQGDSEI---------DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE- 140
           FAE+ T +P+F    E          DQL RIF V+  P + +W  + K+P++ T   + 
Sbjct: 206 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDF 265

Query: 141 ----WSNFCL----DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
               ++N  L    +KH    D     LL+K L   P  RI +E A++  YF
Sbjct: 266 RRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score =  117 bits (295), Expect = 1e-31
 Identities = 62/171 (36%), Positives = 86/171 (50%), Gaps = 28/171 (16%)

Query: 32  IKP-----KSN-IVKVADFGLARAFGV-PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           IKP      SN ++K+ DFGLAR       +  T EVVT +YRAPE+L+GS+ Y+  VD+
Sbjct: 129 IKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDI 188

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDN------------WPGVSKLP 132
           WS+GCIFAE+  R+ LFQ  S I QL  I  +L TP+ +               G  K P
Sbjct: 189 WSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPP 248

Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
                +                 + + LL + L++ P  RI+A +AL H Y
Sbjct: 249 SLPVLY---------TLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score =  115 bits (289), Expect = 3e-31
 Identities = 69/178 (38%), Positives = 92/178 (51%), Gaps = 16/178 (8%)

Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNI+       K+ DFGLAR   +     T  V T +YRAPE++L  Q+Y   VD+
Sbjct: 134 LKP-SNILINENCDLKICDFGLAR---IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDI 189

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED--NWPGVSKLPDYKTTFPEWS 142
           WS GCIFAE+   KPLF G   ++Q   I  +L TP +D  N         +  + P+  
Sbjct: 190 WSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKRE 249

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEYY 197
                +  KN D   +DLLEK L++ P  RI+A  AL H Y A   D TD P   E +
Sbjct: 250 PVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEPVAEEKF 307

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score =  114 bits (287), Expect = 4e-31
 Identities = 66/172 (38%), Positives = 93/172 (54%), Gaps = 21/172 (12%)

Query: 34  PKSNIVKVADFGLARAFGVPVRIYTH---EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
           P+   VK+AD G AR F  P++        VVT WYRAPE+LLG++ Y+  +D+W+IGCI
Sbjct: 146 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI 205

Query: 91  FAEIATRKPLFQGDSEI---------DQLFRIFRVLTTPTEDNWPGVSKLPDY------- 134
           FAE+ T +P+F    E          DQL RIF V+  P + +W  + K+P+Y       
Sbjct: 206 FAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDF 265

Query: 135 -KTTFPEWSNF-CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
            +TT+   S    ++KH    D     LL+K L   P  RI +E AL+  YF
Sbjct: 266 RRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score =  112 bits (281), Expect = 6e-30
 Identities = 63/166 (37%), Positives = 89/166 (53%), Gaps = 17/166 (10%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   VVT WYRAPEV+L    Y+  VD+WS+GCI AE+ T K
Sbjct: 157 LKILDFGLARQTDSEMTGY---VVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP-----DYKTTFPEWSNFCLDKHVKNL 153
           PLF+G   +DQL  I +V  TP+++    V KL      +Y    P +        + N 
Sbjct: 214 PLFKGHDHLDQLMEIMKVTGTPSKEF---VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNA 270

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFA------DKTDLPKF 193
           +   +++LEK L+    +RI A  AL H YF       D+T+ P +
Sbjct: 271 NPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDETEAPPY 316

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score =  112 bits (282), Expect = 6e-30
 Identities = 67/176 (38%), Positives = 86/176 (48%), Gaps = 30/176 (17%)

Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 144 LKP-SNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILG-MGYKENVDI 200

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED----------NWPGVSKLPDY 134
           WS+GCI  E+     LF G   IDQ  +I   L TP+++          N+  V   P Y
Sbjct: 201 WSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNY--VENRPKY 258

Query: 135 KTT-----FPEWSNFCLD--KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
                   FP+   F  D   H K       DLL K L+  P  RI+ ++AL+H Y
Sbjct: 259 AGYSFEELFPDV-LFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score =  104 bits (261), Expect = 5e-27
 Identities = 67/168 (39%), Positives = 87/168 (51%), Gaps = 16/168 (9%)

Query: 32  IKPKSNIV-------KVADFGLAR-AF--GVPVRIYTHEVVTLWYRAPEVLLGS--QRYS 79
           +KPK NI+       K+ DFGLAR AF        +T  V T WYRAPE L GS   +Y+
Sbjct: 129 LKPK-NILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYT 186

Query: 80  CPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV--SKLPDYKTT 137
             +D+WSIGCIFAE+ T KPLF G + + QL  I  +L TP+ +    V   K   Y ++
Sbjct: 187 PAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSS 246

Query: 138 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 185
             +       +   N D   L LLE+ L + P  R  AE AL   YF 
Sbjct: 247 MRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFK 294

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score =  105 bits (263), Expect = 6e-27
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 9/177 (5%)

Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+  +  I P ++ +K+ DFG A+      R  ++ + + +YRAPE++LG+  Y+  +D+
Sbjct: 196 LKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSY-ICSRFYRAPELMLGATNYTTHIDL 254

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSN 143
           WS+GCI AE+    P+F G S +DQL RI +VL TPTED    ++  P+Y    FP+   
Sbjct: 255 WSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN--PNYADIKFPDVKP 312

Query: 144 FCLDK-HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD----LPKFAE 195
             L K   K    D ++ + + L Y P  R+N   AL   +F D  D    LPK+ +
Sbjct: 313 KDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKLPKYID 369

Length = 440

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score =  102 bits (256), Expect = 2e-26
 Identities = 61/162 (37%), Positives = 81/162 (50%), Gaps = 11/162 (6%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   VVT WYRAPEV+L    Y+  VD+WS+GCI AE+ T K
Sbjct: 156 LKILDFGLARHADAEMTGY---VVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD-----YKTTFPEWSNFCLDKHVKNL 153
            LF+G   +DQL +I +V   P  +    V KL D     Y  + P++            
Sbjct: 213 TLFKGKDYLDQLTQILKVTGVPGPEF---VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKA 269

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
               +DLLEK L      R+ A  AL+H YF    D  +  E
Sbjct: 270 SPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEETE 311

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score =  102 bits (255), Expect = 3e-26
 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 38  IVKVADFGLARAFGVPVRIYTHE------VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
           ++K+ DFGLAR        Y+H+      +VT WYR+P +LL    Y+  +D+W+ GCIF
Sbjct: 153 VLKIGDFGLARIVDPH---YSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 209

Query: 92  AEIATRKPLFQGDSEIDQLFRIFR-VLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
           AE+ T KPLF G  E++Q+  I   V     ED    ++ +P +           L   +
Sbjct: 210 AEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLL 269

Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
             ++ + LD LE+ L + P  R+ AE AL H Y + 
Sbjct: 270 PGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score =  101 bits (252), Expect = 8e-26
 Identities = 64/164 (39%), Positives = 87/164 (53%), Gaps = 9/164 (5%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +++ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+   K
Sbjct: 157 LRILDFGLARQADDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G+  IDQL RI  V+ TP+ +    +S      Y  + P      L K  +  +  
Sbjct: 214 ALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPL 273

Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEYY 197
            +DLLEK L+     RI+A  AL H YF+   D  D P+ AE Y
Sbjct: 274 AIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPEDEPE-AEPY 316

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 98.2 bits (244), Expect = 1e-24
 Identities = 57/156 (36%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 159 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP-----DYKTTFPEWSNFCLDKHVKNL 153
            LF G   IDQL  I R++ TP  +    + K+      +Y  +  +             
Sbjct: 216 TLFPGTDHIDQLKLILRLVGTPGAEL---LKKISSESARNYIQSLTQMPKMNFANVFIGA 272

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
           +   +DLLEK L+     RI A  AL H YFA   D
Sbjct: 273 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 95.1 bits (236), Expect = 2e-23
 Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 31/176 (17%)

Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR       + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 149 LKP-SNIVVKSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 205

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED-----------------NWPG 127
           WS+GCI  E+     +FQG   IDQ  ++   L TP+ +                  +PG
Sbjct: 206 WSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPG 265

Query: 128 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +S    ++  FP+W      +  K       DLL K L+  P  RI+ + AL+H Y
Sbjct: 266 IS----FEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 90.4 bits (224), Expect = 4e-22
 Identities = 61/167 (36%), Positives = 83/167 (49%), Gaps = 19/167 (11%)

Query: 32  IKPKS------NIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           IKP++      +++K+ DFG AR         YT  V T WYR+PE+LLG+  Y   VD+
Sbjct: 126 IKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP-YGKAVDM 184

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVL-TTPTED-----NWPGVSKLPDYKTTF 138
           WS+GCI  E++  +PLF G+SEIDQLF I +VL   P E      + P    L       
Sbjct: 185 WSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNH 244

Query: 139 PEWSNFCLDKHVKN-LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           P+     L++     L    LDL++  L   P  R   E  L H  F
Sbjct: 245 PQ----SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 88.6 bits (219), Expect = 4e-21
 Identities = 71/174 (40%), Positives = 88/174 (50%), Gaps = 27/174 (15%)

Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 145 LKP-SNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 201

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT----------PTEDNWPGVSKLPDY 134
           WS+GCI  E+   K LF G   IDQ  ++   L T          PT  N+  V   P Y
Sbjct: 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKY 259

Query: 135 K-TTFPEW---SNFCLD-KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
              TFP+    S F  D +H K       DLL K L+  PA RI+ + AL+H Y
Sbjct: 260 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 85.1 bits (210), Expect = 9e-20
 Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 23/172 (13%)

Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 152 LKP-SNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
           WS+GCI  E+     LF G   IDQ  ++   L TP  +    +   +  Y    P+++ 
Sbjct: 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG 268

Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +  +K            H K       DLL K L+   + RI+ + AL+H Y
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 76.8 bits (190), Expect = 3e-17
 Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 39/163 (23%)

Query: 32  IKPKSNI-------VKVADFGLARAFG-VPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPV 82
           IK   NI       VK+ADFG A+  G +     T  V  T ++ APEV+ G + Y    
Sbjct: 127 IKGA-NILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE-YGRAA 184

Query: 83  DVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 141
           D+WS+GC   E+AT + P  +  + +  L++I             G S  P      PE 
Sbjct: 185 DIWSLGCTVIEMATGKPPWSELGNPMAALYKI-------------GSSGEPPE---IPEH 228

Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                      L ++  D L K L   P  R  A+  L+H + 
Sbjct: 229 -----------LSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 77.5 bits (189), Expect = 6e-17
 Identities = 45/172 (26%), Positives = 65/172 (37%), Gaps = 30/172 (17%)

Query: 32  IKPKSNIVKVADFGLARAFG------VPVRIYTHEVVTLWYRAPEVLLGS--QRYSCPVD 83
           +     +VK+ DFGLA+             + +  V T  Y APEVLLG      S   D
Sbjct: 134 LDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSD 193

Query: 84  VWSIGCIFAEIATRKPLFQGDSE---IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 140
           +WS+G    E+ T  P F+G+       Q  +I   L TP        S       + PE
Sbjct: 194 IWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP--------SLASPLSPSNPE 245

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                       + +   DLL+K L   P  R+++ + L H   A       
Sbjct: 246 -----------LISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKES 286

Length = 384

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 74.2 bits (183), Expect = 1e-16
 Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 9/71 (12%)

Query: 32  IKPKSNI--------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
           +KP  NI        VK+ADFGL++       +    V T  Y APEVLLG   YS   D
Sbjct: 118 LKP-ENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSD 176

Query: 84  VWSIGCIFAEI 94
           +WS+G I  E+
Sbjct: 177 IWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 63.0 bits (154), Expect = 3e-12
 Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 36/159 (22%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           IK  +NI       VK+ DFGL+ A     +     V T ++ APEV+ G + Y    D+
Sbjct: 124 IKA-ANILLTSDGEVKLIDFGLS-AQLSDTKARNTMVGTPYWMAPEVING-KPYDYKADI 180

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+G    E+A  KP +   SE+  +  +F++ T                       +  
Sbjct: 181 WSLGITAIELAEGKPPY---SELPPMKALFKIAT-----------------------NGP 214

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
              ++ +    +  D L+K L   P  R  AE  LKH +
Sbjct: 215 PGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 62.5 bits (153), Expect = 5e-12
 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 21/95 (22%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIYTHEVV-------TLWYRAPEVLLGSQRY 78
           IKP       + +VK+ DFG+++       + +  V        T +Y +PE+    + Y
Sbjct: 129 IKPQNIFLTSNGLVKLGDFGISK-------VLSSTVDLAKTVVGTPYYLSPELCQN-KPY 180

Query: 79  SCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRI 113
           +   D+WS+GC+  E+ T K  F+G++ ++   +I
Sbjct: 181 NYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI 215

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 61.7 bits (150), Expect = 1e-11
 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 29/149 (19%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +K+ DFGL++        Y + VV +  Y APEVL G + Y   VD WS+GC+  E    
Sbjct: 140 IKLTDFGLSKGI----VTYANSVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCG 194

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
            P F G +  ++ +   +         W    + P Y       S+            + 
Sbjct: 195 FPPFSGST-PNETWENLK--------YWKETLQRPVYDDPRFNLSD------------EA 233

Query: 158 LDLLEKTLIYCPATRINA-ENALKHKYFA 185
            DL+   LI  P+ R  + E+   H +F 
Sbjct: 234 WDLI-TKLINDPSRRFGSLEDIKNHPFFK 261

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           VK+ADFG+A+   V    +      + ++ APEV+     Y    D+WS+GC   E+AT 
Sbjct: 141 VKLADFGMAKQ--VVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATG 198

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
           KP +     +  +F+I R    P          +PD                  +L  + 
Sbjct: 199 KPPWSQLEGVAAVFKIGRSKELP---------PIPD------------------HLSDEA 231

Query: 158 LDLLEKTLIYCPATRINAENALKHKY 183
            D + K L   P+ R  A   L+H +
Sbjct: 232 KDFILKCLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 59.2 bits (144), Expect = 7e-11
 Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 32/153 (20%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFG A+      + +T    T  Y APE++L  + Y   VD WS+G +  E+ T +
Sbjct: 132 VKLVDFGFAKKLKSGQKTWTF-CGTPEYVAPEIILN-KGYDFSVDYWSLGILLYELLTGR 189

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P F  D E      I+  +                 K  FP             +D+   
Sbjct: 190 PPFGEDDEDP--MEIYNDILKGN------------GKLEFP-----------NYIDKAAK 224

Query: 159 DLLEKTLIYCPATRI----NAENALK-HKYFAD 186
           DL+++ L   P  R+         +K HK+F  
Sbjct: 225 DLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 32  IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           +KP       +N VK+ DFGLA+  G         V T +Y +PE L     Y    D+W
Sbjct: 136 LKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNH-MSYDEKSDIW 194

Query: 86  SIGCIFAEIATRKPLFQG 103
           S+GC+  E+    P F  
Sbjct: 195 SLGCLIYELCALSPPFTA 212

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 54.4 bits (131), Expect = 3e-09
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K+ ++K+ DFG+++  G    +    V T +Y +PE+  G  +Y+   D+W++GC+  E+
Sbjct: 136 KAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQG-VKYNFKSDIWALGCVLYEL 194

Query: 95  ATRKPLFQGD 104
            T K  F   
Sbjct: 195 LTLKRTFDAT 204

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 54.4 bits (131), Expect = 4e-09
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 37/152 (24%)

Query: 39  VKVADFGLARAF------GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           VK+ DFG ++        G  ++  T    T ++ +PEV+ G + Y    DVWS+GC   
Sbjct: 143 VKLGDFGASKRLQTICSSGTGMKSVTG---TPYWMSPEVISG-EGYGRKADVWSVGCTVV 198

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
           E+ T KP +   +E + +  IF++ T PT        +LP                   +
Sbjct: 199 EMLTEKPPW---AEFEAMAAIFKIATQPTN------PQLPS------------------H 231

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +  D  + L +T +     R +AE  L+H + 
Sbjct: 232 VSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 47/173 (27%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIY--------THEVV-TLWYRAPEVLLGSQ 76
           +KP       +  +K+ DFGL++  G+  R             +V T  Y APEV+LG Q
Sbjct: 119 LKPDNILIDSNGHLKLTDFGLSK-VGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILG-Q 176

Query: 77  RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 136
            +S  VD WS+GCI  E     P F G++  +++F                   + + K 
Sbjct: 177 GHSKTVDWWSLGCILYEFLVGIPPFHGETP-EEIF-----------------QNILNGKI 218

Query: 137 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA---LKHKYFAD 186
            +PE            +  + +DL+ K L+  P  R+ A++      H +F  
Sbjct: 219 EWPE---------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 52.9 bits (128), Expect = 1e-08
 Identities = 46/164 (28%), Positives = 65/164 (39%), Gaps = 43/164 (26%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVP-VRIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
           +KP  NI       +K+ DFGLA+       R  T    T  Y APEVLLG + Y   VD
Sbjct: 119 LKP-ENILLDADGHIKLTDFGLAKELSSEGSRTNTF-CGTPEYLAPEVLLG-KGYGKAVD 175

Query: 84  VWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
            WS+G +  E+ T KP F  +    +++   ++L  P                 FPE   
Sbjct: 176 WWSLGVLLYEMLTGKPPFYAEDR-KEIYE--KILKDP---------------LRFPE--- 214

Query: 144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRI--NAENALK-HKYF 184
                    L  +  DL+   L   P  R+       +K H +F
Sbjct: 215 --------FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 39/163 (23%)

Query: 32  IKP------KSNIVKVADFG----LARAFGVPVRIYTHEVVTLWYRAPEVLLGSQR--YS 79
           IKP       + ++K+ DFG    L                T  Y APEV+ G +   + 
Sbjct: 125 IKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHG 184

Query: 80  CPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRI-FRVLTTPTEDNWPGVSKLPDYKTTF 138
              D+WS+GC+  E+AT K  +   SE+D  F+I F V          G    P      
Sbjct: 185 RAADIWSLGCVVLEMATGKRPW---SELDNEFQIMFHV----------GAGHKP----PI 227

Query: 139 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
           P+            L  +G D L++ L   P  R  A   L+H
Sbjct: 228 PD---------SLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 27/156 (17%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ADFG A             V T ++ APEV+   + Y   VD+WS+G +  E+A  +
Sbjct: 155 VKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKR-KDYGPKVDIWSLGIMCIEMAEGE 213

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  +  +  LF I    TT            P  K               +    +  
Sbjct: 214 PPYLREPPLRALFLI----TT----KGI-----PPLKNP-------------EKWSPEFK 247

Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA 194
           D L K L+  P  R +AE  L+H +        +FA
Sbjct: 248 DFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEFA 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 7/70 (10%)

Query: 36  SNIVKVADFGLA-RAFGV-PV-RIYTHEVVTLWYRAPEVLLGSQR-YSCPVDVWSIGCIF 91
           S +VK++DFG + R  G+ P    +T    TL Y APEV+    R Y  P D+WS+GC  
Sbjct: 145 SGVVKISDFGTSKRLAGINPCTETFTG---TLQYMAPEVIDKGPRGYGAPADIWSLGCTI 201

Query: 92  AEIATRKPLF 101
            E+AT KP F
Sbjct: 202 VEMATGKPPF 211

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 50.6 bits (121), Expect = 7e-08
 Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 33/151 (21%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGL+R      +     V T  Y APE +LG        D WS+GC+  E     
Sbjct: 136 LKLTDFGLSRNGLENKKF----VGTPDYLAPETILGVGDDKM-SDWWSLGCVIFEFLFGY 190

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P F  ++  D +F    +L+     NWP                    ++  +    + +
Sbjct: 191 PPFHAET-PDAVFD--NILSRRI--NWP--------------------EEVKEFCSPEAV 225

Query: 159 DLLEKTLIYCPATRINA---ENALKHKYFAD 186
           DL+ + L   PA R+ A   +    H +F  
Sbjct: 226 DLINRLLCMDPAKRLGANGYQEIKSHPFFKS 256

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 50.4 bits (120), Expect = 8e-08
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           ++NI+KV D G+AR       + +  + T +Y +PE L  ++ Y+   DVW++GC   E+
Sbjct: 137 RTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPE-LFSNKPYNYKSDVWALGCCVYEM 195

Query: 95  ATRKPLFQGDSEIDQLFRI 113
           AT K  F        ++RI
Sbjct: 196 ATLKHAFNAKDMNSLVYRI 214

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 49.1 bits (117), Expect = 2e-07
 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 38  IVKVADFGLA---RAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
            +++ADFG A    A G     +  +++ T+ + APEVL G ++Y    DVWS+GC+  E
Sbjct: 142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIE 200

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
           +AT KP +  +   + L  IF++ +  T  + P
Sbjct: 201 MATAKPPWNAEKHSNHLALIFKIASATTAPSIP 233

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 48.9 bits (116), Expect = 3e-07
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 13/94 (13%)

Query: 39  VKVADFGLARAF------GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           VK+ DFG ++        G  +R  T    T ++ +PEV+ G + Y    DVWS+GC   
Sbjct: 145 VKLGDFGASKRLQTICMSGTGIRSVTG---TPYWMSPEVISG-EGYGRKADVWSLGCTVV 200

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
           E+ T KP +   +E + +  IF++ T PT    P
Sbjct: 201 EMLTEKPPW---AEYEAMAAIFKIATQPTNPQLP 231

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 48.6 bits (115), Expect = 6e-07
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 11/95 (11%)

Query: 18  KITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLG-S 75
           KIT     QA +   +P   I K+ DFGL++  G+      H  V T +Y +PE+LL  +
Sbjct: 167 KITA----QANNLNGRP---IAKIGDFGLSKNIGI--ESMAHSCVGTPYYWSPELLLHET 217

Query: 76  QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL 110
           + Y    D+W++GCI  E+ + K  F   +   QL
Sbjct: 218 KSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQL 252

Length = 1021

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 47.9 bits (114), Expect = 7e-07
 Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 33/148 (22%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ--RYSCPVDVWSIGCIFAEIA 95
            VK+ADFG A +   P   +   V T ++ APEV+L     +Y   VDVWS+G    E+A
Sbjct: 153 TVKLADFGSA-SLVSPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
            RKP     + +  L+ I        +++ P +S   D+   F  + + CL K       
Sbjct: 209 ERKPPLFNMNAMSALYHI-------AQNDSPTLSSN-DWSDYFRNFVDSCLQKI------ 254

Query: 156 DGLDLLEKTLIYCPATRINAENALKHKY 183
                        P  R ++E  LKH++
Sbjct: 255 -------------PQDRPSSEELLKHRF 269

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 47.4 bits (113), Expect = 8e-07
 Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 6/64 (9%)

Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +NI KVADFGLAR       IY         + + APE  L   R+S   DVWS G +  
Sbjct: 139 NNICKVADFGLARVIK--EDIYEAREGAKFPIKWTAPEAAL-YNRFSIKSDVWSFGILLT 195

Query: 93  EIAT 96
           EI T
Sbjct: 196 EIVT 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 47.7 bits (114), Expect = 9e-07
 Identities = 32/105 (30%), Positives = 38/105 (36%), Gaps = 14/105 (13%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVD 83
           IKP  NI       V + DF +A          T     T  Y APEVL   Q YS  VD
Sbjct: 126 IKPD-NILLDEQGHVHITDFNIATKV--TPDTLTTSTSGTPGYMAPEVLC-RQGYSVAVD 181

Query: 84  VWSIGCIFAEIATRKPLFQGDS--EIDQLFRIFRVLTTPTEDNWP 126
            WS+G    E    K  ++G S    DQ+              W 
Sbjct: 182 WWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWS 226

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 9/118 (7%)

Query: 11  QVGTYQVKITTRLFLQ---ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLW 65
           Q+ +  V + ++ F+    AT  C+   + +VK+ DFG++R        R+  H ++ + 
Sbjct: 131 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 190

Query: 66  YRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKPLFQ-GDSEIDQLFRIFRVLTTP 120
           +  PE ++  ++++   DVWS G I  EI T  ++P FQ  ++E+ +     RVL  P
Sbjct: 191 WMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP 247

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 13/102 (12%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVV-----TLWYRAPEVLLGSQR-YSCPVDVWSIGCIF 91
           I K++DFG+++       IY ++       ++++ APEV+    + YS  VD+WS+GC+ 
Sbjct: 146 ICKISDFGISKK---SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVV 202

Query: 92  AEI-ATRKPLFQGDSEIDQLFRIFRVLTTP--TEDNWPGVSK 130
            E+ A R+P +  +  I  +F++    + P    D    +S 
Sbjct: 203 LEMFAGRRP-WSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSP 243

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 47.2 bits (112), Expect = 1e-06
 Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 31/147 (21%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFG+ +         +    T  Y APE+L G  +Y+  VD WS G +  E+   +
Sbjct: 135 IKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQG-LKYTFSVDWWSFGVLLYEMLIGQ 193

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
             F GD E D+LF   RV T             P Y    P W           + ++  
Sbjct: 194 SPFHGDDE-DELFESIRVDT-------------PHY----PRW-----------ITKESK 224

Query: 159 DLLEKTLIYCPATRINAENALK-HKYF 184
           D+LEK     P  R+     ++ H +F
Sbjct: 225 DILEKLFERDPTRRLGVVGNIRGHPFF 251

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 37/154 (24%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           K  +VK+ADFG+A      V      VV T ++ APEV+  S   S   D+WS+GC   E
Sbjct: 134 KDGVVKLADFGVATKLN-DVSKDDASVVGTPYWMAPEVIEMSGA-STASDIWSLGCTVIE 191

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF---CLDKHV 150
           + T  P +   + +  LFRI        +D+ P    LP  +   PE  +F   C  K  
Sbjct: 192 LLTGNPPYYDLNPMAALFRIV------QDDHPP----LP--EGISPELKDFLMQCFQKDP 239

Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                                R  A+  LKH + 
Sbjct: 240 NL-------------------RPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 46.9 bits (111), Expect = 1e-06
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 29/149 (19%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K+N++K+ DFG++R       + T    T +Y +PE L   Q Y    D+WS+GCI  E+
Sbjct: 140 KNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEAL-KHQGYDSKSDIWSLGCILYEM 198

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
                 F+G + +  + RI     TP+         LP+   T+    N  +        
Sbjct: 199 CCLAHAFEGQNFLSVVLRIVEG-PTPS---------LPE---TYSRQLNSIMQS------ 239

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKY 183
                +L K     P+ R +A   L++ +
Sbjct: 240 -----MLNKD----PSLRPSAAEILRNPF 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K   +K+ DFG+AR     V +    + T +Y +PE+   ++ Y+   D+W++GC+  E+
Sbjct: 136 KDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEIC-ENRPYNNKSDIWALGCVLYEM 194

Query: 95  ATRKPLFQGDSEIDQLFRIFR 115
            T K  F+  +  + + +I R
Sbjct: 195 CTLKHAFEAGNMKNLVLKIIR 215

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 22/74 (29%)

Query: 35  KSNIVKVADFGLARAFG-----------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
           ++ +VK++DFGL+R              +P+R         W  APE L    +++   D
Sbjct: 137 ENLVVKISDFGLSRDLYDDDYYRKRGGKLPIR---------WM-APESLK-EGKFTSKSD 185

Query: 84  VWSIGCIFAEIATR 97
           VWS G +  EI T 
Sbjct: 186 VWSFGVLLWEIFTL 199

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 2/91 (2%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
              +VK+ DFG+++      + YT  V T  Y +PE L   + Y+   D+W++GC+  E+
Sbjct: 137 HKMVVKIGDFGISKILSSKSKAYT-VVGTPCYISPE-LCEGKPYNQKSDIWALGCVLYEL 194

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW 125
           A+ K  F+  +    + +I      P  D +
Sbjct: 195 ASLKRAFEAANLPALVLKIMSGTFAPISDRY 225

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           V + DFGLA+    P    T  V T+ Y  PE++  ++ Y    DVW+ GCI  ++ T +
Sbjct: 153 VTITDFGLAKQKQ-PESKLTSVVGTILYSCPEIV-KNEPYGEKADVWAFGCILYQMCTLQ 210

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTED 123
           P F   + +    +I   +  P  +
Sbjct: 211 PPFYSTNMLSLATKIVEAVYEPLPE 235

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +VK+ D G+++   +   +   ++ T  Y APEV  G + YS   D+WS+GC+  E+AT 
Sbjct: 141 LVKIGDLGISKV--LKKNMAKTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLYEMATF 197

Query: 98  KPLFQGDSEIDQLFRIFR 115
            P F+  S  D  +++ R
Sbjct: 198 APPFEARSMQDLRYKVQR 215

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFG AR    P       V T +Y  PE+   +  Y+   D+WS+GCI  E+ T K
Sbjct: 139 VKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIW-ENMPYNNKSDIWSLGCILYELCTLK 197

Query: 99  PLFQGDS 105
             FQ +S
Sbjct: 198 HPFQANS 204

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 13/94 (13%)

Query: 39  VKVADFGLARAF------GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           VK+ DFG ++        G  ++  T    T ++ +PEV+ G + Y    D+WS+GC   
Sbjct: 145 VKLGDFGASKRLQTICLSGTGMKSVTG---TPYWMSPEVISG-EGYGRKADIWSVGCTVV 200

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
           E+ T KP +   +E + +  IF++ T PT    P
Sbjct: 201 EMLTEKPPW---AEFEAMAAIFKIATQPTNPVLP 231

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTL---WYRAPEVLLGSQRYSCPVDVWSIGCIF 91
           ++ +VK++DFGL+R        Y  +   L   W  APE L    +++   DVWS G + 
Sbjct: 138 ENLVVKISDFGLSRD-LYDDDYYKVKGGKLPIRWM-APESLK-EGKFTSKSDVWSFGVLL 194

Query: 92  AEIATR 97
            EI T 
Sbjct: 195 WEIFTL 200

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 31/147 (21%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFG+A          +  V T ++ APEV+   + Y    D+WS+G    E+AT  
Sbjct: 140 VKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGN 199

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD--YKTTFPEWSNFCLDKHVKNLDQD 156
           P +   S++D     FR +    +   P   +L D  Y     E+   CLD+        
Sbjct: 200 PPY---SDVDA----FRAMMLIPKSKPP---RLEDNGYSKLLREFVAACLDEE------- 242

Query: 157 GLDLLEKTLIYCPATRINAENALKHKY 183
                       P  R++AE  LK K+
Sbjct: 243 ------------PKERLSAEELLKSKW 257

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 46.2 bits (109), Expect = 3e-06
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 14/105 (13%)

Query: 32  IKPKSNIVKVADFGLARAF------GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           ++  +  VK+ DFG ++        G  ++  T    T ++ +PEV+ G + Y    DVW
Sbjct: 138 LRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTG---TPYWMSPEVISG-EGYGRKADVW 193

Query: 86  SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP-GVS 129
           S+ C   E+ T KP +   +E + +  IF++ T PT+   P GVS
Sbjct: 194 SVACTVVEMLTEKPPW---AEYEAMAAIFKIATQPTKPMLPDGVS 235

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 40  KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           KVADFGLAR     V + + + +   + APE       +S   DVWS G +  E+ T 
Sbjct: 144 KVADFGLARLIKEDVYLSSDKKIPYKWTAPEAA-SHGTFSTKSDVWSFGILLYEMFTY 200

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 45.5 bits (108), Expect = 4e-06
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 32  IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           IKP       + +VK+ D GL R F          V T +Y +PE +     Y+   D+W
Sbjct: 132 IKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIW 190

Query: 86  SIGCIFAEIATRKPLFQGD 104
           S+GC+  E+A  +  F GD
Sbjct: 191 SLGCLLYEMAALQSPFYGD 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 45.3 bits (107), Expect = 4e-06
 Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           + K+ DFG+AR     + +    V T +Y +PE+   ++ Y+   D+WS+GC+  E+ T 
Sbjct: 140 VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEIC-QNRPYNNKTDIWSLGCVLYELCTL 198

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNW 125
           K  F+G++    + +I +    P   N+
Sbjct: 199 KHPFEGNNLHQLVLKICQGYFAPISPNF 226

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 45.8 bits (108), Expect = 4e-06
 Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 12/132 (9%)

Query: 36  SNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           + I+K+ DFG ++ +   V + + +    T +Y APE L   +RYS   D+WS+G I  E
Sbjct: 205 TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPE-LWERKRYSKKADMWSLGVILYE 263

Query: 94  IATRKPLFQGDS--EIDQ--LFRIFRVLTTPTEDNW-----PGVSKLPDYKTTFPEWSNF 144
           + T    F+G S  EI Q  L+  +     P          P +SK P  + T  +  + 
Sbjct: 264 LLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323

Query: 145 CLDKHVKNLDQD 156
              K+V NL QD
Sbjct: 324 EFLKYVANLFQD 335

Length = 478

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 44.8 bits (106), Expect = 7e-06
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 13/108 (12%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC-IFAEIATR 97
           V+++D GLA       +I      T  Y APEVL G + Y   VD +++GC ++  IA R
Sbjct: 134 VRISDLGLAVELKGGKKI-KGRAGTPGYMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGR 191

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
            P  Q   ++++     R L    E         PD  +  PE  + C
Sbjct: 192 SPFRQRKEKVEKEELKRRTLEMAVE--------YPDKFS--PEAKDLC 229

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 45.1 bits (106), Expect = 7e-06
 Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 10  EQVGTYQVKITTRLFLQ---ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTL 64
           +Q+    V + ++ F+    AT  C+  ++ +VK+ DFG++R        R+  H ++ +
Sbjct: 127 QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 186

Query: 65  WYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKPLFQ-GDSEIDQLFRIFRVLTTP 120
            +  PE ++  ++++   DVWS+G +  EI T  ++P +Q  ++E+ +     RVL  P
Sbjct: 187 RWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP 244

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 14/112 (12%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ--RYSCPVDVWSIGCIFAEIAT 96
           VK+ADFG A +   P   +   V T ++ APEV+L     +Y   VDVWS+G    E+A 
Sbjct: 160 VKLADFGSA-SKSSPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 215

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
           RKP     + +  L+ I +  +   + N        ++  +F  + ++CL K
Sbjct: 216 RKPPLFNMNAMSALYHIAQNDSPTLQSN--------EWTDSFRGFVDYCLQK 259

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 44.0 bits (105), Expect = 1e-05
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 23/75 (30%)

Query: 35  KSNIVKVADFGLARAFG------------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++ +VK++DFGL+R               +P++         W  APE L    +++   
Sbjct: 137 ENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIK---------WM-APESLKDG-KFTSKS 185

Query: 83  DVWSIGCIFAEIATR 97
           DVWS G +  EI T 
Sbjct: 186 DVWSFGVLLWEIFTL 200

Length = 258

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 32/156 (20%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLL----GSQRYSCPVDVWSIGCIFAE 93
           VK+ADFG++ A            + T ++ APEV+         Y    D+WS+G    E
Sbjct: 142 VKLADFGVS-AKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIE 200

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
           +A  +P     + +  L +I +    PT D                 WS+          
Sbjct: 201 LAQMEPPHHELNPMRVLLKILKS-EPPTLDQPSK-------------WSS---------- 236

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                D L+  L+  P  R  A   LKH + +D++D
Sbjct: 237 --SFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSD 270

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSI 87
           C+  + N+VKV+DFGLAR   V    YT    T +   +  PEV   S R+S   DVWS 
Sbjct: 131 CLVGEDNVVKVSDFGLARY--VLDDQYTSSQGTKFPVKWAPPEVFDYS-RFSSKSDVWSF 187

Query: 88  GCIFAEIAT 96
           G +  E+ +
Sbjct: 188 GVLMWEVFS 196

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 15/77 (19%)

Query: 32  IKPKSNI-------VKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP 81
           IKP SN+       VK+ADFG+++           +   V T+ Y +PE + G + YS  
Sbjct: 126 IKP-SNLLINSKGEVKIADFGISKVLENTLDQCNTF---VGTVTYMSPERIQG-ESYSYA 180

Query: 82  VDVWSIGCIFAEIATRK 98
            D+WS+G    E A  K
Sbjct: 181 ADIWSLGLTLLECALGK 197

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 17/70 (24%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL---------WYRAPEVLLGSQRYSCPVDVWSI 87
            +VK++DFGL+R       +Y  +             W  APE L     ++   DVWS 
Sbjct: 142 LVVKISDFGLSR------DVYDDDYYRKKTGGKLPIRWM-APESLK-DGIFTSKSDVWSF 193

Query: 88  GCIFAEIATR 97
           G +  EI T 
Sbjct: 194 GVLLWEIFTL 203

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           + +VK+ D GL R F          V T +Y +PE  +    Y+   D+WS+GC+  E+A
Sbjct: 142 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMA 200

Query: 96  TRKPLFQGD 104
             +  F GD
Sbjct: 201 ALQSPFYGD 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 43.4 bits (102), Expect = 3e-05
 Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 30/151 (19%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFG+ +   +          T  Y APE+LLG Q+Y+  VD WS G +  E+   +
Sbjct: 135 IKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLG-QKYNTSVDWWSFGVLLYEMLIGQ 193

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
             F G  E ++LF+  R+      DN       P Y    P W           L ++  
Sbjct: 194 SPFHGHDE-EELFQSIRM------DN-------PCY----PRW-----------LTREAK 224

Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTD 189
           D+L K  +  P  R+  +  ++   F  + D
Sbjct: 225 DILVKLFVREPERRLGVKGDIRQHPFFREID 255

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 31/147 (21%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFG+ +         +    T  Y APE+L G Q+Y+  VD WS G +  E+   +
Sbjct: 135 IKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIGQ 193

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
             F G+ E D+LF          +               FP W           + ++  
Sbjct: 194 SPFHGEDE-DELFDSILN-----DRPH------------FPRW-----------ISKEAK 224

Query: 159 DLLEKTLIYCPATRINAENALK-HKYF 184
           D L K     P  R+  +  ++ H +F
Sbjct: 225 DCLSKLFERDPTKRLGVDGDIRQHPFF 251

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 43.0 bits (101), Expect = 3e-05
 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 11/84 (13%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVV------TLWYRAPEVL--LGSQRYSCPVDVWSIGC 89
           I+K+ DFG AR         TH  +      T ++ APEV+   G  R S   D+WSIGC
Sbjct: 140 IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKS---DIWSIGC 196

Query: 90  IFAEIATRKPLFQGDSEIDQLFRI 113
              E+AT KP       +  +F I
Sbjct: 197 TVFEMATGKPPLASMDRLAAMFYI 220

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ D G+A+            V T +Y +PE L   + Y+   DVW++G +  E  T K
Sbjct: 140 VKIGDLGVAKLLSDNTNFANTIVGTPYYLSPE-LCEDKPYNEKSDVWALGVVLYECCTGK 198

Query: 99  PLFQGDSEIDQLFRIFR 115
             F  +++   + +I R
Sbjct: 199 HPFDANNQGALILKIIR 215

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 42.8 bits (100), Expect = 4e-05
 Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 33/147 (22%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ--RYSCPVDVWSIGCIFAEIAT 96
           VK+ADFG A +   P   +   V T ++ APEV+L     +Y   VDVWS+G    E+A 
Sbjct: 164 VKLADFGSA-SIASPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 219

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
           RKP     + +  L+ I +             ++ P  ++   EWS++      +N    
Sbjct: 220 RKPPLFNMNAMSALYHIAQ-------------NESPTLQSN--EWSDY-----FRN---- 255

Query: 157 GLDLLEKTLIYCPATRINAENALKHKY 183
               ++  L   P  R  +E  LKH +
Sbjct: 256 ---FVDSCLQKIPQDRPTSEELLKHMF 279

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 32  IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           IKP       + +VK+ D GL R F          V T +Y +PE  +    Y+   D+W
Sbjct: 132 IKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE-RIHENGYNFKSDIW 190

Query: 86  SIGCIFAEIATRKPLFQGD 104
           S+GC+  E+A  +  F GD
Sbjct: 191 SLGCLLYEMAALQSPFYGD 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +K+ADFG+ +  G+   + T     T  Y APE+L   Q Y   VD W++G +  E+   
Sbjct: 135 IKIADFGMCKE-GILGGVTTSTFCGTPDYIAPEILSY-QPYGPAVDWWALGVLLYEMLAG 192

Query: 98  KPLFQGDSEIDQLFR 112
           +  F+GD E D+LF+
Sbjct: 193 QSPFEGDDE-DELFQ 206

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 28/154 (18%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK++DFG        V      V T ++ APEV+  +  Y   VD+WS+G +  E+   +
Sbjct: 156 VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTP-YGTEVDIWSLGIMVIEMVDGE 214

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  DS +  + R+         D+ P   KL +     P   +F              
Sbjct: 215 PPYFSDSPVQAMKRL--------RDSPP--PKLKNAHKISPVLRDF-------------- 250

Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
             LE+ L   P  R  A+  L H +   +T LP+
Sbjct: 251 --LERMLTREPQERATAQELLDHPFLL-QTGLPE 281

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 42.6 bits (100), Expect = 6e-05
 Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 25/167 (14%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI-FAEIATR 97
           V + D G A+ F V    +     T+   APEVL    +Y+   D+WS G + F  +A  
Sbjct: 196 VCIGDLGAAQ-FPVVAPAFLGLAGTVETNAPEVL-ARDKYNSKADIWSAGIVLFEMLAYP 253

Query: 98  KPLFQGD---------SEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT--FPEWSNFCL 146
             +F+           S    L +I   L    E+ +P     P  +    F E+++   
Sbjct: 254 STIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEE-FPRD---PGSRLVRGFIEYASLER 309

Query: 147 DKHVK-------NLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
             + +       NL  DG  L+ K L +  A R +AE  L +  FA 
Sbjct: 310 QPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356

Length = 357

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 42.1 bits (99), Expect = 6e-05
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 6/69 (8%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEV---VTLWYRAPEVLLGSQRYSCPVDVWSI 87
           C+  ++++VKVADFGL+R   +    YT        + + APE  L   ++S   DVW+ 
Sbjct: 135 CLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVWAF 191

Query: 88  GCIFAEIAT 96
           G +  EIAT
Sbjct: 192 GVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVT---LWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           + + K+ADFGLAR   +    YT        + + APE      R++   DVWS G +  
Sbjct: 139 NLVCKIADFGLARL--IEDDEYTAREGAKFPIKWTAPEAAN-YGRFTIKSDVWSFGILLT 195

Query: 93  EIAT 96
           EI T
Sbjct: 196 EIVT 199

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 42.3 bits (99), Expect = 7e-05
 Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 20/139 (14%)

Query: 61  VVTLWYRAPEVLLG-SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVL-T 118
           V T  YR+PEV+LG    YS   D+WS+GCI  E+ T K L+     ++ L  + + L  
Sbjct: 306 VSTRHYRSPEVVLGLGWMYS--TDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGR 363

Query: 119 TPTEDNWPGVSKLPDYKTTFPEWSNF--CLD-KH---------VKNLDQDGL--DLLEKT 164
            P+E  W G     + +  +        C D KH         V+ + +D L  DL+   
Sbjct: 364 LPSE--WAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGL 421

Query: 165 LIYCPATRINAENALKHKY 183
           L Y    R+NA     H Y
Sbjct: 422 LHYDRQKRLNARQMTTHPY 440

Length = 467

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 6/70 (8%)

Query: 39  VKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
           ++++D GLA     G  +R     V T+ Y APEV+  ++RY+   D W +GC+  E+  
Sbjct: 141 IRISDLGLAVEIPEGETIR---GRVGTVGYMAPEVV-KNERYTFSPDWWGLGCLIYEMIE 196

Query: 97  RKPLFQGDSE 106
            K  F+   E
Sbjct: 197 GKSPFRQRKE 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 41.6 bits (97), Expect = 1e-04
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 31/146 (21%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           VK+ADFG+A       +I  +  V T ++ APEV+  S  Y    D+WS+G    E+A  
Sbjct: 140 VKLADFGVAGQL-TDTQIKRNTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKG 197

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
           +P    +S++  +    RVL    ++N P ++   ++   F E+ + CL+K         
Sbjct: 198 EP---PNSDMHPM----RVLFLIPKNNPPTLTG--EFSKPFKEFIDACLNKD-------- 240

Query: 158 LDLLEKTLIYCPATRINAENALKHKY 183
                      P+ R  A+  LKHK+
Sbjct: 241 -----------PSFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 34/123 (27%)

Query: 66  YRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW 125
           Y +PE LL  +      D+W++GCI  ++ T KP F+G +E    +  F+          
Sbjct: 188 YVSPE-LLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE----YLTFQ---------- 232

Query: 126 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI----NAENALKH 181
             + KL +Y  +FP            N   D  DL+EK L+  P  R+      +    H
Sbjct: 233 -KILKL-EY--SFPP-----------NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277

Query: 182 KYF 184
            +F
Sbjct: 278 PFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 42/166 (25%), Positives = 62/166 (37%), Gaps = 50/166 (30%)

Query: 39  VKVADFGLA----------RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
           VK+ADFG++            F          V T ++ APEV+  S  Y    D+WS+G
Sbjct: 137 VKLADFGVSGQLTSTMSKRNTF----------VGTPFWMAPEVIKQSG-YDEKADIWSLG 185

Query: 89  CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
               E+A  +P       +  LF I      P   N P   +   +   F ++ + CL+K
Sbjct: 186 ITAIELAKGEPPLSDLHPMRVLFLI------P--KNNPPSLEGNKFSKPFKDFVSLCLNK 237

Query: 149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF--ADKTDLPK 192
                               P  R +A+  LKHK+   A KT    
Sbjct: 238 D-------------------PKERPSAKELLKHKFIKKAKKTSYLT 264

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK++DFG        V      V T ++ APE L+    Y   VD+WS+G +  E+   +
Sbjct: 155 VKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 213

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  +  +  +  I         DN P   KL +     P    F              
Sbjct: 214 PPYFNEPPLKAMKMI--------RDNLP--PKLKNLHKVSPSLKGF-------------- 249

Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
             L++ L+  PA R  A   LKH + A
Sbjct: 250 --LDRLLVRDPAQRATAAELLKHPFLA 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)

Query: 39  VKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ADFG+ +     GV  R +     T  Y APE++   Q Y   VD W+ G +  E+ 
Sbjct: 140 IKIADFGMCKEHMVDGVTTRTFCG---TPDYIAPEII-AYQPYGKSVDWWAYGVLLYEML 195

Query: 96  TRKPLFQGDSEIDQLFR 112
             +P F G+ E D+LF+
Sbjct: 196 AGQPPFDGEDE-DELFQ 211

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 40  KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKP 99
           K+ADFG+ +   +     T    T  Y APE+L     Y   VD W++G +  E+   +P
Sbjct: 136 KLADFGMCKEGILNGVTTTTFCGTPDYIAPEIL-QELEYGPSVDWWALGVLMYEMMAGQP 194

Query: 100 LFQGDSEIDQLF 111
            F+ D+E D LF
Sbjct: 195 PFEADNE-DDLF 205

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 36/138 (26%)

Query: 32  IKPKSNI-------VKVADFG--------LARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ 76
           +KP SNI       +K+ DFG        LA+ F          V T  Y APE + G+ 
Sbjct: 127 VKP-SNILVNSRGQIKLCDFGVSGQLVNSLAKTF----------VGTSSYMAPERIQGND 175

Query: 77  RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 136
            YS   D+WS+G    E+AT +  F    E D    IF +L     +  P   +LP  K 
Sbjct: 176 -YSVKSDIWSLGLSLIELATGR--FPYPPENDPPDGIFELLQYIVNEPPP---RLPSGKF 229

Query: 137 TFPEWSNF---CLDKHVK 151
           + P++ +F   CL K  +
Sbjct: 230 S-PDFQDFVNLCLIKDPR 246

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ--RYSCPVDVWSIGCIFAEIA 95
           +VK+ DFG A     P   +   V T ++ APEV+L     +Y   VDVWS+G    E+A
Sbjct: 153 LVKLGDFGSASIMA-PANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

Query: 96  TRKPLFQGDSEIDQLFRI 113
            RKP     + +  L+ I
Sbjct: 209 ERKPPLFNMNAMSALYHI 226

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 35/151 (23%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV------TLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +K++DFG+++                    ++++ APEV+  +  Y+   D+WS+GC+  
Sbjct: 145 IKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTS-YTRKADIWSLGCLVV 203

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
           E+ T K  F    +  QL  IF++          G +  P+     P            N
Sbjct: 204 EMLTGKHPF---PDCTQLQAIFKI----------GENASPE----IPS-----------N 235

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +  + +D LEKT       R  A   LKH +
Sbjct: 236 ISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 5/73 (6%)

Query: 27  ATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTL-WYRAPEVLLGSQRYSCPVD 83
           AT  C+  K+  +K+ADFG++R    G   RI    V+ + W     +LLG  +++   D
Sbjct: 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLG--KFTTASD 214

Query: 84  VWSIGCIFAEIAT 96
           VW+ G    EI T
Sbjct: 215 VWAFGVTLWEILT 227

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 39.5 bits (92), Expect = 5e-04
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 14/83 (16%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SN+       VK+ DFG++    +   I    V T  Y APE + G Q Y    DV
Sbjct: 121 VKP-SNMLVNTRGQVKLCDFGVSTQ--LVNSIAKTYVGTNAYMAPERISGEQ-YGIHSDV 176

Query: 85  WSIGCIFAEIATRK---PLFQGD 104
           WS+G  F E+A  +   P  Q +
Sbjct: 177 WSLGISFMELALGRFPYPQIQKN 199

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 33/153 (21%)

Query: 39  VKVADFGLARAFGVPV----RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           VK+ADFG++ +         ++    V T  + APEV+     Y    D+WS G    E+
Sbjct: 141 VKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIEL 200

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK---TTFPEWSNFCLDKHVK 151
           AT    +         +   +VL    +++ P +    DYK    +F +  + CL K   
Sbjct: 201 ATGAAPYSK-------YPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKD-- 251

Query: 152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                            P+ R  AE  LKHK+F
Sbjct: 252 -----------------PSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 37/134 (27%), Positives = 47/134 (35%), Gaps = 41/134 (30%)

Query: 32  IKPKSNI-------VKVADFGLARAF--------------------GVPVRIYTHE---- 60
           IKP  NI       +K+ADFGL +                       V VR   H+    
Sbjct: 127 IKP-DNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRV 185

Query: 61  -----VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFR 115
                V T  Y APEVL G   Y    D WS+G I  E+    P F  D+  +   +I  
Sbjct: 186 RANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIIN 244

Query: 116 V---LTTPTEDNWP 126
               L  P +    
Sbjct: 245 WKESLRFPPDPPVS 258

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 18/105 (17%)

Query: 27  ATSFCIKPKSNIVKVADFGLARAFGVPVRIYT--------HEVVTLWYRAPEVLLGSQRY 78
           AT  C+     +VK+ DFG++R       +YT        H ++ + +  PE ++  +++
Sbjct: 149 ATRNCLVGYDLVVKIGDFGMSR------DVYTTDYYRVGGHTMLPIRWMPPESIM-YRKF 201

Query: 79  SCPVDVWSIGCIFAEIAT--RKPLFQ-GDSEIDQLFRIFRVLTTP 120
           +   DVWS G +  EI T  ++P +   + E+ +     R+L  P
Sbjct: 202 TTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRP 246

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 23/70 (32%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDVWS 86
           VK+ DFG+ R       IY  +    +YR            APE L     ++   DVWS
Sbjct: 158 VKIGDFGMTR------DIYETD----YYRKGGKGLLPVRWMAPESLK-DGVFTTKSDVWS 206

Query: 87  IGCIFAEIAT 96
            G +  E+AT
Sbjct: 207 FGVVLWEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 39.0 bits (91), Expect = 7e-04
 Identities = 41/151 (27%), Positives = 60/151 (39%), Gaps = 30/151 (19%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQR-YSCPVDVWSIGCIFAEIAT 96
           V + DFGL++ F        +    T+ Y APEV+ G    +   VD WS+G +  E+ T
Sbjct: 144 VVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLT 203

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
               F  D E +    I R +           SK P     FP           K +  +
Sbjct: 204 GASPFTVDGEQNSQSEISRRILK---------SKPP-----FP-----------KTMSAE 238

Query: 157 GLDLLEKTLIYCPATRINAENA--LK-HKYF 184
             D ++K L   P  R+ A  A  +K H +F
Sbjct: 239 ARDFIQKLLEKDPKKRLGANGADEIKNHPFF 269

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 12/89 (13%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQR--YSCPV 82
           +KP SNI       +K+ DFG++    V     T +     Y APE +  S R  Y    
Sbjct: 134 VKP-SNILLDRNGNIKLCDFGISGQL-VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRS 191

Query: 83  DVWSIGCIFAEIATRK-PLFQGDSEIDQL 110
           DVWS+G    E+AT K P  + +S  DQL
Sbjct: 192 DVWSLGITLYEVATGKFPYPKWNSVFDQL 220

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 39.0 bits (91), Expect = 8e-04
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 31  CIKPKSNIVKVADFGLARAF----GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWS 86
           C+  +S  VKVADFGLAR         V  +T   + + + A E  L +Q+++   DVWS
Sbjct: 129 CMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALES-LQTQKFTTKSDVWS 187

Query: 87  IGCIFAEIATR 97
            G +  E+ TR
Sbjct: 188 FGVLLWELMTR 198

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 38.7 bits (90), Expect = 9e-04
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 29/103 (28%)

Query: 31  CIKPKSNIVKVADFGLAR---------AFGV--PVRIYTHEVVTLWYRAPEVLLGSQRYS 79
           C+   + +VKV+DFG+ R         + G   PV+          +  PEV   S +YS
Sbjct: 131 CLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVK----------WSPPEVFNFS-KYS 179

Query: 80  CPVDVWSIGCIFAEIATR-KPLFQGDS------EIDQLFRIFR 115
              DVWS G +  E+ T  K  F+  S       I + FR++R
Sbjct: 180 SKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR 222

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 12/73 (16%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-----TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           ++++D GLA      V+I   E +     T+ Y APEVL  +QRY+   D W +GC+  E
Sbjct: 141 IRISDLGLA------VKIPEGESIRGRVGTVGYMAPEVL-NNQRYTLSPDYWGLGCLIYE 193

Query: 94  IATRKPLFQGDSE 106
           +   +  F+G  E
Sbjct: 194 MIEGQSPFRGRKE 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 31  CIKPKSNIVKVADFGLAR--AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
           C+  + N++K++DFG++R    GV       + + + + APE  L   RYS   DVWS G
Sbjct: 125 CLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEA-LNYGRYSSESDVWSFG 183

Query: 89  CIFAE 93
            +  E
Sbjct: 184 ILLWE 188

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 43/167 (25%), Positives = 65/167 (38%), Gaps = 47/167 (28%)

Query: 39  VKVADFGLARA--FGVPVRIYTHEVV-------------TLWYRAPEVLLGSQRYSCPVD 83
           +K+ DFGL++     +   +Y   +              T  Y APEV+L  Q Y  PVD
Sbjct: 140 IKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVIL-RQGYGKPVD 198

Query: 84  VWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP-GVSKLPDYKTTFPEWS 142
            W++G I  E       F GD+  ++LF   +V++   E  WP G   LP          
Sbjct: 199 WWAMGIILYEFLVGCVPFFGDTP-EELFG--QVISDDIE--WPEGDEALPA--------- 244

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK---HKYFAD 186
                        D  DL+ + L   P  R+    A +   H++F  
Sbjct: 245 -------------DAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 38.3 bits (89), Expect = 0.001
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSI 87
           C+      VKV+DFGL+R   V    YT  V + +   +  PEVLL S ++S   DVW+ 
Sbjct: 131 CLVDDQGCVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLLYS-KFSSKSDVWAF 187

Query: 88  GCIFAEIAT 96
           G +  E+ +
Sbjct: 188 GVLMWEVYS 196

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 37  NIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           + VK+ DFGL +A       YT     +    WY APE L+ S+ Y    DVWS G    
Sbjct: 146 HQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWY-APECLIQSKFYIAS-DVWSFGVTLY 203

Query: 93  EIAT 96
           E+ T
Sbjct: 204 ELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFG+ +      +       T  Y APE++   Q Y   VD W+ G +  E+   +
Sbjct: 140 IKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQ 198

Query: 99  PLFQGDSEIDQLF 111
           P F G+ E D+LF
Sbjct: 199 PPFDGEDE-DELF 210

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 9/85 (10%)

Query: 35  KSNIVKVADFGLAR-AFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
           ++N+VK+ DFGLAR  +  P  VR  +  +   W  APE +   + Y+   DVWS G + 
Sbjct: 209 ENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWM-APESIF-DKVYTTQSDVWSFGVLL 266

Query: 92  AEI----ATRKPLFQGDSEIDQLFR 112
            EI    A+  P  Q + E  Q  +
Sbjct: 267 WEIFSLGASPYPGVQINEEFCQRLK 291

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
             ++VK++DFGLA+        Y      E    WY APE L  S ++S   DVWS G  
Sbjct: 144 SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY-APECLRTS-KFSSASDVWSFGVT 201

Query: 91  FAEIATR 97
             E+ T 
Sbjct: 202 LYELFTY 208

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 33/124 (26%)

Query: 66  YRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW 125
           Y APE+LLG   Y+  VD W++G +  E+ T  P F  D  +++++R  ++L  P     
Sbjct: 159 YLAPELLLG-HGYTKAVDWWTLGVLLYEMLTGLPPFY-DENVNEMYR--KILQEPL---- 210

Query: 126 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI---NAENALKHK 182
               + PD                    D+D  DLL   L   P  R+    A+    H 
Sbjct: 211 ----RFPD------------------GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHP 248

Query: 183 YFAD 186
           +F+ 
Sbjct: 249 FFSQ 252

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 21/135 (15%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
             K+ADFG++      +    + V+ T ++ APEV+     Y+   D+WS+G    E+A 
Sbjct: 137 QAKLADFGVSGQLTDTMA-KRNTVIGTPFWMAPEVIQE-IGYNNKADIWSLGITAIEMAE 194

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF---CLDKHVKNL 153
            KP +   S+I  +  IF +   P     P +S    +    PE+++F   CL   VK+ 
Sbjct: 195 GKPPY---SDIHPMRAIFMIPNKPP----PTLSDPEKWS---PEFNDFVKKCL---VKDP 241

Query: 154 DQ--DGLDLLEKTLI 166
           ++    + LL+   I
Sbjct: 242 EERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLW---YRAPEVLLGSQRYSCPVDVWSI 87
           C+  ++ +VKV+DFG+ R   V    YT    T +   + +PEV   S +YS   DVWS 
Sbjct: 131 CLVGENQVVKVSDFGMTRF--VLDDQYTSSTGTKFPVKWSSPEVFSFS-KYSSKSDVWSF 187

Query: 88  GCIFAEI 94
           G +  E+
Sbjct: 188 GVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 7/64 (10%)

Query: 40  KVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC-IFAEIAT 96
           +++D GLA     G  +   T    T  Y APE+L   + YS PVD +++GC I+  +A 
Sbjct: 135 RLSDLGLAVELKDGKTI---TQRAGTNGYMAPEILK-EEPYSYPVDWFAMGCSIYEMVAG 190

Query: 97  RKPL 100
           R P 
Sbjct: 191 RTPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 37.8 bits (87), Expect = 0.002
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFG            +  V T ++ APEV+   + Y   VD+WS+G +  E+   +
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGE 213

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
           P +  ++ +  L+ I         +  P +         F ++ N CLD  V+
Sbjct: 214 PPYLNENPLRALYLI-------ATNGTPELQNPEKLSAIFRDFLNRCLDMDVE 259

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)

Query: 39  VKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ADFG+ +     GV  + +     T  Y APE++   Q Y   VD W+ G +  E+ 
Sbjct: 140 IKIADFGMCKENMWDGVTTKTFCG---TPDYIAPEII-AYQPYGKSVDWWAFGVLLYEML 195

Query: 96  TRKPLFQGDSEIDQLFR 112
             +  F+G+ E D+LF+
Sbjct: 196 AGQAPFEGEDE-DELFQ 211

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 37/152 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           VK+ DFGL +   +     TH    T+ Y APE+L+ S  +   VD WS+G +  ++ T 
Sbjct: 139 VKLTDFGLCKE-SIHEGTVTHTFCGTIEYMAPEILMRSG-HGKAVDWWSLGALMYDMLTG 196

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
            P F  ++    + +I +           G   LP Y                  L  + 
Sbjct: 197 APPFTAENRKKTIDKILK-----------GKLNLPPY------------------LTPEA 227

Query: 158 LDLLEKTLIYCPATRI-----NAENALKHKYF 184
            DLL+K L   P++R+     +A     H +F
Sbjct: 228 RDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFF 259

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 29/145 (20%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ADFG+A             V T ++ APEV+  S  Y    D+WS+G    E+A  +
Sbjct: 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELAKGE 198

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P     SE+  +    +VL    ++N P +    +Y     E+   CL+K          
Sbjct: 199 P---PHSELHPM----KVLFLIPKNNPPTLEG--NYSKPLKEFVEACLNKE--------- 240

Query: 159 DLLEKTLIYCPATRINAENALKHKY 183
                     P+ R  A+  LKHK+
Sbjct: 241 ----------PSFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 6/64 (9%)

Query: 37  NIVKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           N VK+ DFGL +        Y      E    WY APE L  S ++S   DVWS G +  
Sbjct: 145 NRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWY-APESLTES-KFSVASDVWSFGVVLY 202

Query: 93  EIAT 96
           E+ T
Sbjct: 203 ELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 29/79 (36%), Positives = 35/79 (44%), Gaps = 27/79 (34%)

Query: 32  IKPKSNI-------VKVADFG--------LARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ 76
           IKP SNI       VK+ DFG        LA  F            T +Y APE + G +
Sbjct: 131 IKP-SNILLTRKGQVKLCDFGVSGELVNSLAGTF----------TGTSFYMAPERIQG-K 178

Query: 77  RYSCPVDVWSIGCIFAEIA 95
            YS   DVWS+G    E+A
Sbjct: 179 PYSITSDVWSLGLTLLEVA 197

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 11/116 (9%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL----GSQRYSCPVDVWSIGCIFAEI 94
           +K+ADFG++      ++     + T ++ APEV++      + Y    DVWS+G    E+
Sbjct: 142 IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
           A  +P      E++ +    RVL    +   P +++   + + F ++   CL+K+V
Sbjct: 202 AQIEPPHH---ELNPM----RVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNV 250

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 37  NIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           N++K+ADFGLAR     +  Y   T+  + + + APE L   + Y+   DVWS G +  E
Sbjct: 171 NVMKIADFGLARDVH-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLLWE 228

Query: 94  IATRKPLFQGDSEIDQLFRIFR 115
           I T          +++LF++ +
Sbjct: 229 IFTLGGSPYPGIPVEELFKLLK 250

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)

Query: 31  CIKPKSNIVKVADFGLAR--AFGV-PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSI 87
           C+  ++N++K++DFG++R    G+  V     ++   W  APE  L   RY+   DVWS 
Sbjct: 124 CLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKW-TAPEA-LNYGRYTSESDVWSY 181

Query: 88  GCIFAEIAT 96
           G +  E  +
Sbjct: 182 GILLWETFS 190

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFG            +  V T ++ APEV+     Y   VD+WS+G +  E+   +
Sbjct: 154 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGE 212

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
           P +  ++ +  L+ I     T          KL      F ++ N CL+  V+ 
Sbjct: 213 PPYLNENPLRALYLI----ATNGTPELQNPEKL---SAIFRDFLNRCLEMDVEK 259

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK++DFG        V      V T ++ APEV+     Y   VD+WS+G +  E+   +
Sbjct: 154 VKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVI-SRLPYGTEVDIWSLGIMVIEMVDGE 212

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  +  +  + RI R    P   N   VS         P   +F              
Sbjct: 213 PPYFNEPPLQAMKRI-RDNLPPKLKNLHKVS---------PRLRSF-------------- 248

Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
             L++ L+  PA R  A   L H + A
Sbjct: 249 --LDRMLVRDPAQRATAAELLNHPFLA 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 36.6 bits (85), Expect = 0.004
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 38/153 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFG A+   +  R +T    T  Y APEV+  S+ ++  VD W++G +  E+    
Sbjct: 140 IKLTDFGFAKK--LRDRTWTL-CGTPEYLAPEVI-QSKGHNKAVDWWALGILIYEMLVGY 195

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P F      D  F I+               K+   K  FP      LD + K       
Sbjct: 196 PPFFD----DNPFGIYE--------------KILAGKLEFPR----HLDLYAK------- 226

Query: 159 DLLEKTLIYCPATRI-----NAENALKHKYFAD 186
           DL++K L+     R+      A++   H++F  
Sbjct: 227 DLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 42/158 (26%), Positives = 60/158 (37%), Gaps = 48/158 (30%)

Query: 39  VKVADFGLARAFGVPVRIY----THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC-IFAE 93
           +K+ DFG A+   V  R Y    T E     Y APE++L S+ Y   VD W++G  I+  
Sbjct: 140 IKITDFGFAKR--VKGRTYTLCGTPE-----YLAPEIIL-SKGYGKAVDWWALGILIYEM 191

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
           +A   P F  D    Q++                  K+ + K  FP +         K  
Sbjct: 192 LAGYPPFF--DDNPIQIYE-----------------KILEGKVRFPSF----FSPDAK-- 226

Query: 154 DQDGLDLLEKTLIYCPATR----INAENALK-HKYFAD 186
                DL+   L      R     N  N +K H +FA 
Sbjct: 227 -----DLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 35  KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
           ++N++K+ADFGLAR     +  Y   T+  + + + APE L   + Y+   DVWS G + 
Sbjct: 172 ENNVMKIADFGLARDVN-NIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLM 229

Query: 92  AEIATRKPLFQGDSEIDQLFRIFR 115
            EI T          +++LF++ +
Sbjct: 230 WEIFTLGGSPYPGIPVEELFKLLK 253

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	197
KOG0659|consensus	318		100.0
KOG0661|consensus	538		100.0
KOG0660|consensus	359		100.0
KOG0663|consensus	419		100.0
KOG0594|consensus	323		100.0
KOG0600|consensus	560		100.0
KOG0575|consensus	592		100.0
KOG0593|consensus	396		100.0
KOG0033|consensus	355		100.0
KOG0588|consensus	786		100.0
KOG0658|consensus	364		100.0
KOG0615|consensus	475		100.0
KOG0581|consensus	364		100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0667|consensus	586		100.0
KOG0592|consensus	604		100.0
KOG0662|consensus	292		99.98
KOG0598|consensus	357		99.98
KOG0583|consensus	370		99.97
KOG0578|consensus	550		99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
KOG0599|consensus	411		99.97
KOG0616|consensus	355		99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
KOG0666|consensus	438		99.97
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.97
KOG0671|consensus	415		99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.97
KOG0198|consensus	313		99.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.96
KOG0591|consensus	375		99.96
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.96
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.96
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.96
KOG0605|consensus	550		99.96
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.96
KOG0582|consensus	516		99.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.96
PTZ00284	467	protein kinase; Provisional	99.96
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.96
KOG0694|consensus	694		99.96
KOG0585|consensus	576		99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
PLN00009	294	cyclin-dependent kinase A; Provisional	99.96
KOG0665|consensus	369		99.96
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.96
KOG0032|consensus	382		99.96
KOG0597|consensus	808		99.96
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.96
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.96
KOG4717|consensus	864		99.96
KOG0604|consensus	400		99.96
KOG0201|consensus	467		99.96
KOG0669|consensus	376		99.96
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.96
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.96
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.96
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.96
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.95
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.95
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.95
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.95
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.95
PHA03212	391	serine/threonine kinase US3; Provisional	99.95
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.95
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.95
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.95
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.95
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.95
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.95
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.95
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.95
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.95
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.95
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.95
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.95
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.95
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.95
KOG4279|consensus	1226		99.95
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.95
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.95
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.95
KOG0589|consensus	426		99.95
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.95
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.95
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.95
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.95
KOG0197|consensus	468		99.95
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.95
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.95
KOG0610|consensus	459		99.95
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.95
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.95
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.95
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.95
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.95
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.94
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.94
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.94
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.94
KOG0596|consensus	677		99.94
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.94
PHA03209	357	serine/threonine kinase US3; Provisional	99.94
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.94
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.94
KOG0580|consensus	281		99.94
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.94
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.94
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.94
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.94
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.94
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.94
KOG0983|consensus	391		99.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.94
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.94
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.94
PTZ00283	496	serine/threonine protein kinase; Provisional	99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.94
PHA03207	392	serine/threonine kinase US3; Provisional	99.94
KOG0664|consensus	449		99.94
KOG0574|consensus	502		99.94
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.94
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.94
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.94
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.94
KOG0986|consensus	591		99.94
KOG0579|consensus	1187		99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
KOG0192|consensus	362		99.94
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.94
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.94
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.94
KOG0690|consensus	516		99.94
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.93
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.93
PHA03211	461	serine/threonine kinase US3; Provisional	99.93
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.93
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.93
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.93
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.93
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.93
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.93
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.93
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.93
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.93
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.93
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.93
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.93
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.93
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.93
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.93
PTZ00267	478	NIMA-related protein kinase; Provisional	99.93
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.93
KOG1026|consensus	774		99.93
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.93
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.93
KOG0603|consensus	612		99.93
KOG0670|consensus	752		99.93
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.93
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.93
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.93
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.93
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.93
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.93
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.93
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.93
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.93
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.93
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.93
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.93
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.93
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.93
PHA03210	501	serine/threonine kinase US3; Provisional	99.93
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.93
KOG0595|consensus	429		99.92
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.92
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.92
KOG0611|consensus	668		99.92
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.92
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.92
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.92
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.92
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.92
KOG0577|consensus	948		99.92
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.92
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.92
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.92
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.92
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.92
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.92
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.92
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.92
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.92
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.92
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.92
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.92
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.92
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.92
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.92
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.92
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.92
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.92
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.92
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.92
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.92
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.92
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.91
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.91
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.91
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.91
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.91
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.91
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.91
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.91
PHA02988	283	hypothetical protein; Provisional	99.91
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.91
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.91
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.91
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.91
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.91
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.91
KOG0696|consensus	683		99.91
KOG4236|consensus	888		99.91
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.91
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.91
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.91
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.91
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.91
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.91
KOG0607|consensus	463		99.9
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.9
KOG0584|consensus	632		99.9
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.9
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.9
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.9
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.9
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.9
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.9
KOG1095|consensus	1025		99.9
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.9
KOG4721|consensus	904		99.9
PLN00181	793	protein SPA1-RELATED; Provisional	99.9
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.9
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.9
KOG2345|consensus	302		99.9
KOG0614|consensus	732		99.9
KOG0612|consensus	1317		99.9
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.9
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.9
KOG1151|consensus	775		99.9
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.9
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.9
KOG1290|consensus	590		99.9
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.9
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.89
KOG1989|consensus	738		99.89
KOG0668|consensus	338		99.89
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.89
KOG4645|consensus	1509		99.89
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.89
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.89
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.89
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.89
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.89
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.89
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.89
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.89
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.89
KOG4257|consensus	974		99.89
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.89
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.89
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.89
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.89
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.89
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.89
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.89
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.89
KOG0193|consensus	678		99.88
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.88
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.88
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.88
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.88
KOG0586|consensus	596		99.88
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.88
KOG0196|consensus	996		99.88
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.88
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.88
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.88
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.88
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.88
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.88
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.88
PHA02882	294	putative serine/threonine kinase; Provisional	99.88
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.88
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.88
KOG1006|consensus	361		99.88
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.88
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.88
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.88
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.88
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.88
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.88
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.88
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.88
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.88
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.88
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.88
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.88
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.87
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.87
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.87
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.87
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.87
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.87
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.87
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.87
KOG1035|consensus	1351		99.87
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.87
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.87
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.87
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.87
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.87
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.87
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.87
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.87
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.87
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.87
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.87
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.87
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.87
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.87
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.86
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.86
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.86
KOG0199|consensus	1039		99.86
KOG0200|consensus	609		99.86
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.86
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.86
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.86
KOG0695|consensus	593		99.86
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.86
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.86
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.86
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.86
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.86
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.86
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.86
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.86
KOG0587|consensus	953		99.86
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.85
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.85
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.85
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.85
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.85
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.85
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.85
KOG4278|consensus	1157		99.85
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.85
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.84
KOG1094|consensus	807		99.84
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.84
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.84
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.84
KOG0194|consensus	474		99.84
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.83
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.83
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.83
KOG0608|consensus	1034		99.83
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.83
KOG1027|consensus	903		99.82
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.82
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.82
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.81
KOG1167|consensus	418		99.8
KOG1025|consensus	1177		99.8
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.79
KOG0590|consensus	601		99.79
KOG1024|consensus	563		99.76
KOG1187|consensus	361		99.75
KOG3653|consensus	534		99.75
KOG4250|consensus	732		99.75
KOG0984|consensus	282		99.74
KOG0576|consensus	829		99.73
KOG2052|consensus	513		99.68
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.67
KOG0606|consensus	1205		99.62
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.57
KOG0603|consensus	612		99.56
KOG0195|consensus	448		99.55
KOG1033|consensus	516		99.45
KOG1152|consensus	772		99.44
KOG1345|consensus	378		99.44
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.37
KOG1023|consensus	484		99.35
KOG1240|consensus	1431		99.31
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.25
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.17
KOG4158|consensus	598		99.13
KOG0590|consensus	601		98.98
KOG1164|consensus	322		98.86
KOG0606|consensus	1205		98.81
KOG1165|consensus	449		98.64
KOG1266|consensus	458		98.62
KOG1163|consensus	341		98.5
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.47
KOG2137|consensus	700		98.33
KOG0601|consensus	524		98.29
KOG1166|consensus	974		97.75
PRK12274	218	serine/threonine protein kinase; Provisional	97.2
PRK09188	365	serine/threonine protein kinase; Provisional	97.17
KOG1243|consensus	690		97.14
KOG1035|consensus	1351		97.04
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	96.95
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	96.82
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	96.31
COG4248	637	Uncharacterized protein with protein kinase and he	96.08
KOG1093|consensus	725		95.87
KOG0601|consensus	524		95.78
KOG0576|consensus	829		95.14
KOG1290|consensus	590		94.54
KOG3741|consensus	655		94.43
smart00090	237	RIO RIO-like kinase.	92.98
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	90.73
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	86.33
PRK09605	535	bifunctional UGMP family protein/serine/threonine	86.2
PRK14879	211	serine/threonine protein kinase; Provisional	82.64
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	82.58
KOG1826|consensus	2724		82.42
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	80.82

>KOG0659|consensus

Probab=100.00  E-value=1.7e-38  Score=221.38  Aligned_cols=187  Identities=46%  Similarity=0.805  Sum_probs=164.1

Q ss_pred             hHHHhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeC
Q psy6390           4 LIQLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRA   68 (197)
Q Consensus         4 ~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~a   68 (197)
                      +++-+...|+..++++++.++++|++||         +||      +++.+||+|||+|+.++++....+..+.|.+|+|
T Consensus        90 vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRA  169 (318)
T KOG0659|consen   90 VIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRA  169 (318)
T ss_pred             HhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccC
Confidence            3444555699999999999999999999         888      5678899999999999887776777789999999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ||++++.+.|+..+|+||+||++.||+.|.+.|.+.++.+++..+.+.+|.|.++.|+.+...+++.... .........
T Consensus       170 PELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~-~~P~~~~~~  248 (318)
T KOG0659|consen  170 PELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ-QFPKPPLNN  248 (318)
T ss_pred             hHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh-cCCCCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999999998885432 223333444


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ..+..+.++.||+.+||..||.+|+|+.|+++|+||++...+.
T Consensus       249 lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt  291 (318)
T KOG0659|consen  249 LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPT  291 (318)
T ss_pred             ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCC
Confidence            7788999999999999999999999999999999999765443

>KOG0661|consensus

Probab=100.00  E-value=5e-38  Score=234.13  Aligned_cols=186  Identities=40%  Similarity=0.692  Sum_probs=159.9

Q ss_pred             hhhHHH---hhhcCCHHHHHHHHHHHHhhhccc---------ccCCC------CcEEEeecCCccccCCCccccccceec
Q psy6390           2 CNLIQL---EWEQVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVT   63 (197)
Q Consensus         2 ~~~~~~---~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~~~~~~~~~~~~   63 (197)
                      |||.++   +.+.|+|..++.|++||++||+|+         +||+|      ..|||+|||+|+.+.+. .-++..+.|
T Consensus        94 ~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk-pPYTeYVST  172 (538)
T KOG0661|consen   94 CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK-PPYTEYVST  172 (538)
T ss_pred             hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccC-CCcchhhhc
Confidence            566666   345699999999999999999999         88855      55689999999987543 235566889


Q ss_pred             cceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC-CCCCCCCcccc
Q psy6390          64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-PDYKTTFPEWS  142 (197)
Q Consensus        64 ~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  142 (197)
                      .+|+|||++..+..|+.+.|+||+||+++|+.+-++.|.+.++.|++.+|.+++|.|..+.|+..... .....+++...
T Consensus       173 RWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~  252 (538)
T KOG0661|consen  173 RWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVK  252 (538)
T ss_pred             ccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCC
Confidence            99999999998888999999999999999999999999999999999999999999999988874432 33344566666


Q ss_pred             hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       143 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ........+..+.++.++|.+|+.+||.+||||+|+++||||+-..
T Consensus       253 ~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  253 PSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             CCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence            7777788888999999999999999999999999999999998543

>KOG0660|consensus

Probab=100.00  E-value=8.1e-38  Score=226.14  Aligned_cols=182  Identities=35%  Similarity=0.595  Sum_probs=155.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC------CcEEEeecCCccccCC--CccccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGV--PVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~--~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      .|++.++..+++|++.||.|+         +||.|      ..+||+|||+|+....  .....+..+.|.+|+|||++.
T Consensus       121 ~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll  200 (359)
T KOG0660|consen  121 DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLL  200 (359)
T ss_pred             cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHh
Confidence            399999999999999999999         88844      5569999999998754  334456778999999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCC--CCCCCCCCcccchhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      ....|+.+.||||+||++.||++|++.|.+.+...++..+...++.|..+.......  ...+...++..........++
T Consensus       201 ~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp  280 (359)
T KOG0660|consen  201 NSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFP  280 (359)
T ss_pred             ccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcC
Confidence            888899999999999999999999999999999999999999999997765544431  112444566666677778889


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                      +.+..++||+.+||..||.+|+|++|+|+|||+....++++
T Consensus       281 ~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~d  321 (359)
T KOG0660|consen  281 NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPED  321 (359)
T ss_pred             CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence            99999999999999999999999999999999988776653

>KOG0663|consensus

Probab=100.00  E-value=1.4e-36  Score=218.00  Aligned_cols=179  Identities=50%  Similarity=0.860  Sum_probs=161.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+|+..+++.++.|+++|++||         ||+      +.+.+||+|||+|+.++++...++..+.|.+|+|||++.+
T Consensus       172 q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG  251 (419)
T KOG0663|consen  172 QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLG  251 (419)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcC
Confidence            5799999999999999999999         677      4588999999999999998877888899999999999999


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC-CCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK-TTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  153 (197)
                      ...|+.++|+||+|||+.+++.+++.|.+....+++.+|+..++.|....|+.....+... ..++...-..++..+...
T Consensus       252 ~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~  331 (419)
T KOG0663|consen  252 AKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGAL  331 (419)
T ss_pred             CcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhcccc
Confidence            8889999999999999999999999999999999999999999999999999999888764 556666555566666555


Q ss_pred             C--HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         154 D--QDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       154 ~--~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      +  +...+|+.++|..||++|.||++.|+|+||.+..
T Consensus       332 ~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  332 SLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP  368 (419)
T ss_pred             ccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence            4  9999999999999999999999999999999743

>KOG0594|consensus

Probab=100.00  E-value=1.3e-35  Score=214.79  Aligned_cols=181  Identities=57%  Similarity=1.021  Sum_probs=165.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .++...++.++.||+.||+||         |||      +++.+||+|||+|+..+-+....+..++|.+|+|||++.+.
T Consensus       116 g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs  195 (323)
T KOG0594|consen  116 GLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGS  195 (323)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCC
Confidence            577788999999999999999         888      45778999999999887777778888999999999999998


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc-hhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS-NFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  154 (197)
                      ..|+..+||||+||++.||++++..|.+..+.+++.+|.+.++.|....|+.....+++...++.+. ........+..+
T Consensus       196 ~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~  275 (323)
T KOG0594|consen  196 TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLD  275 (323)
T ss_pred             CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccC
Confidence            7799999999999999999999999999999999999999999999999999999999998888886 666777777788


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      .+..+++.+||+.+|.+|.||+.++.||||++.....
T Consensus       276 ~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~  312 (323)
T KOG0594|consen  276 PDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS  312 (323)
T ss_pred             ccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence            8999999999999999999999999999999875544

>KOG0600|consensus

Probab=100.00  E-value=2.7e-35  Score=221.03  Aligned_cols=177  Identities=42%  Similarity=0.740  Sum_probs=152.0

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~   71 (197)
                      ..-.|++.+++.|++|+++||+||         ||.      +++.+||+|||+|+.+.... ..++..+.|.+|+|||+
T Consensus       211 p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPEL  290 (560)
T KOG0600|consen  211 PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPEL  290 (560)
T ss_pred             CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHH
Confidence            344699999999999999999999         554      66889999999999765533 33677889999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc-hhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS-NFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  150 (197)
                      +++...|+.++|+||+|||+.||+.|+++|.+.++.+++..|.++.|.|..+.|+ ....+.+....+... .....+..
T Consensus       291 LLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~kLP~~~~~kp~~~y~r~l~E~~  369 (560)
T KOG0600|consen  291 LLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSKLPHATIFKPQQPYKRRLRETF  369 (560)
T ss_pred             hcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-cccCCcccccCCCCcccchHHHHh
Confidence            9998889999999999999999999999999999999999999999999999999 555554333222222 44455557


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      ...+..+.+|+..||..||.+|.||.++|+|+||.
T Consensus       370 ~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~  404 (560)
T KOG0600|consen  370 KDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT  404 (560)
T ss_pred             ccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence            88999999999999999999999999999999994

>KOG0575|consensus

Probab=100.00  E-value=3.1e-35  Score=224.96  Aligned_cols=155  Identities=25%  Similarity=0.358  Sum_probs=132.8

Q ss_pred             hhHHHhh--hcCCHHHHHHHHHHHHhhhccc---------cc------CCCCcEEEeecCCccccCCCccccccceeccc
Q psy6390           3 NLIQLEW--EQVGTYQVKITTRLFLQATSFC---------IK------PKSNIVKVADFGLARAFGVPVRIYTHEVVTLW   65 (197)
Q Consensus         3 ~~~~~~~--~~l~~~~~~~~~~qi~~~l~~l---------lk------p~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~   65 (197)
                      .|.++..  +.++|.+++.+++||+.||.||         ||      .++.+|||+|||+|..+..+.....+.+||+-
T Consensus       104 sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPN  183 (592)
T KOG0575|consen  104 SLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPN  183 (592)
T ss_pred             cHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCc
Confidence            3445544  6799999999999999999999         33      37789999999999988876666667899999


Q ss_pred             eeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhh
Q psy6390          66 YRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC  145 (197)
Q Consensus        66 y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (197)
                      |.|||++...+ .+..+||||+||++|.||.|++||+..+-.+.+.++...--..                         
T Consensus       184 YIAPEVl~k~g-HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~-------------------------  237 (592)
T KOG0575|consen  184 YIAPEVLNKSG-HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSM-------------------------  237 (592)
T ss_pred             ccChhHhccCC-CCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccc-------------------------
Confidence            99999998645 8899999999999999999999999999999998886522111                         


Q ss_pred             hhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       146 ~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                          +..+|.++++||.+||..||.+|||+++||.|+||++.
T Consensus       238 ----P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  238 ----PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             ----ccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence                13578999999999999999999999999999999544

>KOG0593|consensus

Probab=100.00  E-value=6e-35  Score=207.34  Aligned_cols=178  Identities=39%  Similarity=0.658  Sum_probs=151.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..++++++|++.|+.||         |||      .++.+||||||+|+.+..+...++..+.|.+|+|||++.+
T Consensus        96 ~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvG  175 (396)
T KOG0593|consen   96 NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVG  175 (396)
T ss_pred             CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcc
Confidence            4699999999999999999999         888      5577899999999988767777888899999999999999


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC-CCcccc-hhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEWS-NFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~  152 (197)
                      ...|+..+||||+||++.||++|.+.|.+.++.+++..|...+|...+.-..-....+.|.. +++... ....+..+++
T Consensus       176 DtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~  255 (396)
T KOG0593|consen  176 DTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPK  255 (396)
T ss_pred             cCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhccc
Confidence            88899999999999999999999999999999999999999999877654433333333322 233332 3456677788


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ++..+.|++.+||..||.+|++.++++.||||.+.
T Consensus       256 ~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~  290 (396)
T KOG0593|consen  256 ISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGF  290 (396)
T ss_pred             chHHHHHHHHHHhcCCccccccHHHHhcChHHHHH
Confidence            99999999999999999999999999999999654

>KOG0033|consensus

Probab=100.00  E-value=3.3e-34  Score=198.50  Aligned_cols=149  Identities=27%  Similarity=0.408  Sum_probs=128.5

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccCC---------CCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKPK---------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp~---------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ++|..+-.+++||++||+|+         +||.         ..-+||+|||+|..++ +........||+.||+||++.
T Consensus       107 ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~g~~~~G~~GtP~fmaPEvvr  185 (355)
T KOG0033|consen  107 YSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-DGEAWHGFAGTPGYLSPEVLK  185 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-CccccccccCCCcccCHHHhh
Confidence            78999999999999999999         7773         3457999999999887 445566779999999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      ..+ ++..+|||++||++|-++.|++||.+.+......+|....-..+..                         .++.+
T Consensus       186 kdp-y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~-------------------------~w~~i  239 (355)
T KOG0033|consen  186 KDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSP-------------------------EWDTV  239 (355)
T ss_pred             cCC-CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCc-------------------------ccCcC
Confidence            755 9999999999999999999999999998888888887643332222                         23668


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ++++++|+++||..||++|+|+.|+|+|||+++.
T Consensus       240 s~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  240 TPEAKSLIRRMLTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             CHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence            8999999999999999999999999999999764

>KOG0588|consensus

Probab=100.00  E-value=1.8e-33  Score=217.19  Aligned_cols=156  Identities=31%  Similarity=0.473  Sum_probs=131.4

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ...+|+|.++++++.||+.|+.||         +||      .++++||+|||.|..- .+.....+.||+++|++||++
T Consensus       105 ~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe-~~gklLeTSCGSPHYA~PEIV  183 (786)
T KOG0588|consen  105 RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE-VPGKLLETSCGSPHYAAPEIV  183 (786)
T ss_pred             hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc-cCCccccccCCCcccCCchhh
Confidence            345799999999999999999999         777      3355999999999643 344456677999999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+.+..+.++||||+|||||.||+|..||++.+-...+.++.++.-..+                             ..
T Consensus       184 ~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP-----------------------------s~  234 (786)
T KOG0588|consen  184 SGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP-----------------------------SN  234 (786)
T ss_pred             cCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC-----------------------------Cc
Confidence            9988778999999999999999999999998887777777755322222                             55


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      ++.++.+||++||.+||++|+|.+||++|||+..-.+.+.-
T Consensus       235 Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~  275 (786)
T KOG0588|consen  235 ISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS  275 (786)
T ss_pred             CCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence            89999999999999999999999999999999877666543

>KOG0658|consensus

Probab=100.00  E-value=6.2e-34  Score=206.42  Aligned_cols=180  Identities=33%  Similarity=0.626  Sum_probs=147.2

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+++-++.||..||+||         |||       +.+.+||||||+|+.+..... ..+...|..|+|||++
T Consensus       119 ~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep-niSYicSRyYRaPELi  197 (364)
T KOG0658|consen  119 NQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP-NISYICSRYYRAPELI  197 (364)
T ss_pred             CCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC-ceeEEEeccccCHHHH
Confidence            35789999999999999999999         777       557889999999998754332 3456789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh-ccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK-HVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  151 (197)
                      ++...|+.+.||||.|||+.||+.|++.|.+.+..+++..+.+.+|.|..+....+.-.-. ...++........+ ...
T Consensus       198 fga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~-~~~~p~ik~~~~~~~~~~  276 (364)
T KOG0658|consen  198 FGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYT-EFKFPQIKAHPWHKVFFK  276 (364)
T ss_pred             cCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccc-cccCcccccccceeeccc
Confidence            9999999999999999999999999999999999999999999999998876554432211 11122222212211 346


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..+.++.+|+.++|..+|++|.++.|++.||||+.+.++
T Consensus       277 ~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  277 RLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             CCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence            688999999999999999999999999999999987766

>KOG0615|consensus

Probab=100.00  E-value=6.4e-35  Score=214.33  Aligned_cols=153  Identities=27%  Similarity=0.423  Sum_probs=122.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      +.+.|+.-+-+++|++.|+.||         |||+|         ..+||+|||+|+..+ ....+.+.+||+.|.|||+
T Consensus       271 k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g-~~sfm~TlCGTpsYvAPEV  349 (475)
T KOG0615|consen  271 KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG-EGSFMKTLCGTPSYVAPEV  349 (475)
T ss_pred             cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc-cceehhhhcCCccccChhh
Confidence            4589999999999999999999         89854         457999999999876 4456777899999999999


Q ss_pred             hcCCC--CCCCchhhhhhhHHHHHHHhCCCCCCCCChHH-HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          72 LLGSQ--RYSCPVDVWSIGCIFAEIATRKPLFQGDSEID-QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        72 ~~~~~--~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      +.+..  .++.++||||+||++|.+++|.+||....... ...++.+..-..-+                         .
T Consensus       350 l~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p-------------------------~  404 (475)
T KOG0615|consen  350 LASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGP-------------------------L  404 (475)
T ss_pred             eecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccC-------------------------h
Confidence            97532  24458999999999999999999998765444 44455432222111                         1


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .+..+|+++.+||.+||..||++|||++|+|+||||+...
T Consensus       405 ~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  405 QWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             hhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            2245889999999999999999999999999999998543

>KOG0581|consensus

Probab=100.00  E-value=1.2e-33  Score=205.37  Aligned_cols=153  Identities=23%  Similarity=0.320  Sum_probs=124.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ++++|..+.+++.++++||.||          |||      .++.|||||||.|+.+-.+  ...+.+||..|||||.+.
T Consensus       173 g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~a~tfvGT~~YMsPERi~  250 (364)
T KOG0581|consen  173 GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--IANTFVGTSAYMSPERIS  250 (364)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--hcccccccccccChhhhc
Confidence            5699999999999999999999          888      5688999999999987655  345679999999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCC--ChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGD--SEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.. |+.++||||||++++|+..|+.||...  .....+..+......+++....                        .
T Consensus       251 g~~-Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~------------------------~  305 (364)
T KOG0581|consen  251 GES-YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE------------------------G  305 (364)
T ss_pred             CCc-CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc------------------------c
Confidence            865 999999999999999999999999774  2333444444433333221110                        1


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..|.++++++..||++||.+|+++.|+++|||+++-.+
T Consensus       306 ~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  306 EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED  343 (364)
T ss_pred             cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence            37889999999999999999999999999999986544

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=5.2e-32  Score=200.77  Aligned_cols=175  Identities=47%  Similarity=0.907  Sum_probs=140.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.||++||+||         |||      +++.+||+|||.++.............++..|+|||.+.+
T Consensus        98 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  177 (288)
T cd07871          98 NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLG  177 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcC
Confidence            3478999999999999999999         776      5577899999999765443333445578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCC-CcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT-FPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  153 (197)
                      ...++.++|+||+||++|++++|+.||.+.+..+.+..+....+.+....|+.......+... ++...........+..
T Consensus       178 ~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (288)
T cd07871         178 STEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRL  257 (288)
T ss_pred             CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCC
Confidence            555889999999999999999999999999988888888888888888777765544433221 2222222222334567


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      +.++++||.+||..||.+|||++|+++||||
T Consensus       258 ~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         258 DTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             CHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            8999999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0667|consensus

Probab=100.00  E-value=6.1e-33  Score=214.02  Aligned_cols=180  Identities=33%  Similarity=0.532  Sum_probs=138.4

Q ss_pred             HHhhhcCCHHHHHHHHHHHHhhhccc---------ccCCCC--------cEEEeecCCccccCCCccccccceeccceeC
Q psy6390           6 QLEWEQVGTYQVKITTRLFLQATSFC---------IKPKSN--------IVKVADFGLARAFGVPVRIYTHEVVTLWYRA   68 (197)
Q Consensus         6 ~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~--------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~a   68 (197)
                      +.++++|+...++.++.||+.||.+|         |||+|+        .|||+|||+|........   ..++++.|+|
T Consensus       280 ~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy---tYiQSRfYRA  356 (586)
T KOG0667|consen  280 NNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY---TYIQSRFYRA  356 (586)
T ss_pred             hcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce---eeeecccccc
Confidence            33567899999999999999999999         888664        469999999987654433   6789999999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCC---Ccccc---
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT---FPEWS---  142 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---  142 (197)
                      ||++.+.+ |+.+.||||||||+.||++|.+.|.+.+..+++.+|.+.+|.|+............+...   .+...   
T Consensus       357 PEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~  435 (586)
T KOG0667|consen  357 PEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVET  435 (586)
T ss_pred             chhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeee
Confidence            99999966 999999999999999999999999999999999999999998887433322222222111   00000   


Q ss_pred             ---------------------------hhhhhhccC-CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         143 ---------------------------NFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       143 ---------------------------~~~~~~~~~-~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                                                 ......... .....+.|++.+||.+||.+|+|..++++||||.+...
T Consensus       436 ~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~  510 (586)
T KOG0667|consen  436 SAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSL  510 (586)
T ss_pred             cccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccccc
Confidence                                       000001111 23346789999999999999999999999999985443

>KOG0592|consensus

Probab=100.00  E-value=4.2e-32  Score=205.50  Aligned_cols=149  Identities=23%  Similarity=0.405  Sum_probs=129.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-------------cccc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-------------YTHE   60 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-------------~~~~   60 (197)
                      ...|+|..++.|+.||+.||+||         |||      ++++++|+|||.|+.++.....             ....
T Consensus       168 ~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SF  247 (604)
T KOG0592|consen  168 YGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSF  247 (604)
T ss_pred             hCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccce
Confidence            35799999999999999999999         777      6788999999999987542111             1346


Q ss_pred             eeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcc
Q psy6390          61 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE  140 (197)
Q Consensus        61 ~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (197)
                      +||..|.+||++.... .++.+|+|+|||++|+|+.|.+||.+.++.-.+++|..+.-..+                   
T Consensus       248 VGTAeYVSPElL~~~~-~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp-------------------  307 (604)
T KOG0592|consen  248 VGTAEYVSPELLNDSP-AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP-------------------  307 (604)
T ss_pred             eeeecccCHHHhcCCC-CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC-------------------
Confidence            8999999999998755 88999999999999999999999999999999999987644433                   


Q ss_pred             cchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                                +..++.++||++++|..||.+|+|+++|.+||||.++
T Consensus       308 ----------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V  344 (604)
T KOG0592|consen  308 ----------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV  344 (604)
T ss_pred             ----------CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence                      4466899999999999999999999999999999876

>KOG0662|consensus

Probab=99.98  E-value=1.9e-31  Score=177.35  Aligned_cols=181  Identities=50%  Similarity=0.853  Sum_probs=158.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...++...+++++.|++.|+.|+         +||      .|+.+|++|||+++.++.+.......+.|.+|++|.+++
T Consensus        95 ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlf  174 (292)
T KOG0662|consen   95 NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLF  174 (292)
T ss_pred             CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceee
Confidence            34588889999999999999999         777      778899999999999988877777888999999999999


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.+-|++..|+||-||++.|+.. |++.|.+.+..+++.++...++.+..+.|+++...+++..-..--.-.......+.
T Consensus       175 gakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~  254 (292)
T KOG0662|consen  175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPK  254 (292)
T ss_pred             eeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhh
Confidence            98879999999999999999987 89999999999999999999999999999999999988642221122334455677


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .+..-+|++.++|..+|.+|++|+++++||||.+-.+
T Consensus       255 lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s~  291 (292)
T KOG0662|consen  255 LNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFSP  291 (292)
T ss_pred             hcchhHHHHHHHhccCcccccCHHHHhcCccccccCC
Confidence            8888999999999999999999999999999987654

>KOG0598|consensus

Probab=99.98  E-value=6.2e-32  Score=196.28  Aligned_cols=155  Identities=26%  Similarity=0.373  Sum_probs=131.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      +.|+|+.++.|+.+|+.||.||         |||      .+++++|+|||+++..........+.+||+.|||||++.+
T Consensus       120 g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~  199 (357)
T KOG0598|consen  120 GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLG  199 (357)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhc
Confidence            5799999999999999999999         777      6689999999999976555555556799999999999998


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .+ ++..+|.||+|+++|+|++|.+||.+.+.......+........                            ....+
T Consensus       200 ~g-y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~----------------------------p~~ls  250 (357)
T KOG0598|consen  200 KG-YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLP----------------------------PGYLS  250 (357)
T ss_pred             CC-CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCC----------------------------CccCC
Confidence            65 99999999999999999999999999998888888865321111                            12278


Q ss_pred             HhHHHHHHhhcccCCCCCC----CHHHHhcCcccCCCCCcchhh
Q psy6390         155 QDGLDLLEKTLIYCPATRI----NAENALKHKYFADKTDLPKFA  194 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~----s~~ell~hp~~~~~~~~~~~~  194 (197)
                      .+++++++++|..||++|.    .+++|-+||||+++ +++++.
T Consensus       251 ~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i-nW~~l~  293 (357)
T KOG0598|consen  251 EEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI-NWEKLL  293 (357)
T ss_pred             HHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC-CHHHHH
Confidence            8999999999999999996    68899999999976 555543

>KOG0583|consensus

Probab=99.97  E-value=1.1e-31  Score=203.38  Aligned_cols=149  Identities=26%  Similarity=0.375  Sum_probs=125.0

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CC-CcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KS-NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~-~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..++.|.+++.+++|+++|++||         |||      .+ +++||+|||++.............+||+.|+|||++
T Consensus       114 ~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl  193 (370)
T KOG0583|consen  114 KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVL  193 (370)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHh
Confidence            46799999999999999999999         666      55 899999999998774444556778999999999999


Q ss_pred             cCCC-CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQ-RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~-~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ..+.++|+||+|++||.|++|+.||+..+.......+.+.--.                  ++           .
T Consensus       194 ~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~------------------~p-----------~  244 (370)
T KOG0583|consen  194 SGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFK------------------IP-----------S  244 (370)
T ss_pred             CCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCcc------------------CC-----------C
Confidence            8866 3468899999999999999999999997777666665432111                  11           2


Q ss_pred             CC-CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         152 NL-DQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       152 ~~-~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      .+ |.++++|+++||..||.+|+|+.+++.||||+.
T Consensus       245 ~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  245 YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            24 889999999999999999999999999999996

>KOG0578|consensus

Probab=99.97  E-value=8.8e-32  Score=204.55  Aligned_cols=158  Identities=24%  Similarity=0.357  Sum_probs=133.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..++|.++..+.+++++||+||         ||.      .++.+||+|||++..+..........+||+.|||||++..
T Consensus       364 ~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtr  443 (550)
T KOG0578|consen  364 TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTR  443 (550)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhh
Confidence            3489999999999999999999         444      6678999999999988776666778899999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. |++++||||||++.+||+.|.+||-..++...+++|.......                          -.....+|
T Consensus       444 k~-YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~--------------------------lk~~~klS  496 (550)
T KOG0578|consen  444 KP-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPK--------------------------LKNPEKLS  496 (550)
T ss_pred             cc-cCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCC--------------------------cCCccccC
Confidence            55 9999999999999999999999999988888888875322111                          11225689


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhh
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA  194 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~  194 (197)
                      ..++||+.+||+.|+.+|++|.|||+||||+.......+.
T Consensus       497 ~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ssL~  536 (550)
T KOG0578|consen  497 PELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPESSLN  536 (550)
T ss_pred             HHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCHHHhH
Confidence            9999999999999999999999999999997666555443

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=8.1e-31  Score=195.68  Aligned_cols=179  Identities=44%  Similarity=0.729  Sum_probs=132.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.||+||         |||      +++.+||+|||.+..............+++.|+|||++.+
T Consensus        98 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  177 (303)
T cd07869          98 GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLG  177 (303)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcC
Confidence            4589999999999999999999         777      5577899999998765433333344577899999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCC-Ccccchhhhhh--cc
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT-FPEWSNFCLDK--HV  150 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~  150 (197)
                      ...++.++|+||+||++|+|++|..||.+.. ..+.+..+....+.+....++.....+.+... ...........  ..
T Consensus       178 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (303)
T cd07869         178 STEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNK  257 (303)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhc
Confidence            5557889999999999999999999998754 44566677776676666666554433322211 11001100111  11


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ...+..+.+|+.+||+.||++|||++|+++||||++..
T Consensus       258 ~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         258 LSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             cCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence            23567899999999999999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0599|consensus

Probab=99.97  E-value=9.5e-32  Score=189.07  Aligned_cols=150  Identities=25%  Similarity=0.396  Sum_probs=124.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc-
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL-   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~-   73 (197)
                      -++||.+.+++++|+++|++||         +||      +|.+++|+|||.|..+..... ....+||+.|+|||.+. 
T Consensus       118 VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Gek-LrelCGTPgYLAPEtikC  196 (411)
T KOG0599|consen  118 VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEK-LRELCGTPGYLAPETIKC  196 (411)
T ss_pred             eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchh-HHHhcCCCcccChhheee
Confidence            3699999999999999999999         666      678899999999998866543 45679999999999984 


Q ss_pred             ----CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 ----GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ----~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                          +.++|+..+|+|++||++|.++.|.+||-.....-.+..+.+.--...+                +.|        
T Consensus       197 ~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~s----------------peW--------  252 (411)
T KOG0599|consen  197 SMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRS----------------PEW--------  252 (411)
T ss_pred             ecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCC----------------cch--------
Confidence                3455889999999999999999999999777666666666553222222                222        


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                       .++|.+.+|||+++|+.||++|+|++|+|+||||.
T Consensus       253 -adis~~~KdLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  253 -ADISATVKDLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             -hhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence             55788999999999999999999999999999993

>KOG0616|consensus

Probab=99.97  E-value=3.5e-31  Score=187.51  Aligned_cols=156  Identities=23%  Similarity=0.339  Sum_probs=131.1

Q ss_pred             hhHHHhh--hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccc
Q psy6390           3 NLIQLEW--EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLW   65 (197)
Q Consensus         3 ~~~~~~~--~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~   65 (197)
                      +|.....  ++|+|..++.|+.||+.|++||         +||      +++.+||+|||.|+.....   ..+.+||+.
T Consensus       130 ElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r---T~TlCGTPe  206 (355)
T KOG0616|consen  130 ELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR---TWTLCGTPE  206 (355)
T ss_pred             cHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc---EEEecCCcc
Confidence            3444433  3799999999999999999999         777      6789999999999987654   335689999


Q ss_pred             eeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhh
Q psy6390          66 YRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC  145 (197)
Q Consensus        66 y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (197)
                      |+|||++.+.+ ++.++|.||+|+.+|||+.|.+||...+......+|.+.--..+                        
T Consensus       207 YLAPEii~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP------------------------  261 (355)
T KOG0616|consen  207 YLAPEIIQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP------------------------  261 (355)
T ss_pred             ccChHHhhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC------------------------
Confidence            99999998744 99999999999999999999999999999988888876433322                        


Q ss_pred             hhhccCCCCHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCCCCcch
Q psy6390         146 LDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADKTDLPK  192 (197)
Q Consensus       146 ~~~~~~~~~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~~~~~~  192 (197)
                           ...+.++++|++++|+.|-++|.     ...+|..||||+++ ++++
T Consensus       262 -----~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v-~W~~  307 (355)
T KOG0616|consen  262 -----SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV-DWEA  307 (355)
T ss_pred             -----cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc-cHHH
Confidence                 44778999999999999999995     57789999999965 4443

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=1.6e-30  Score=192.91  Aligned_cols=171  Identities=48%  Similarity=0.790  Sum_probs=133.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |||      +++.++|+|||.++..... .......++..|+|||.+.+
T Consensus       105 ~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~  183 (290)
T cd07862         105 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQ  183 (290)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC-cccccccccccccChHHHhC
Confidence            3589999999999999999999         777      5577899999999765433 22334568999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|..||.+....+.+..+....+.+....++........  .+........+...+.++
T Consensus       184 ~~-~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  260 (290)
T cd07862         184 SS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ--AFHSKSAQPIEKFVTDID  260 (290)
T ss_pred             CC-CCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccch--hccCCCCCCHHHHccCCC
Confidence            44 889999999999999999999999999988888888887776665555433222111  111112222333445688


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++.+||+.||++|||+.++++||||
T Consensus       261 ~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         261 ELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=7.3e-31  Score=204.68  Aligned_cols=177  Identities=34%  Similarity=0.641  Sum_probs=132.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC-------CCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK-------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~-------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||+.||+||         |||+       +..+||+|||+|+....... .....+|+.|+|||++.
T Consensus       165 ~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~-~~~~~~t~~y~aPE~~~  243 (440)
T PTZ00036        165 HALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR-SVSYICSRFYRAPELML  243 (440)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCC-cccCCCCcCccCHHHhc
Confidence            4689999999999999999999         7773       34689999999986643222 22346789999999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCC-CCCCcccchhhhh-hccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLD-KHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~  151 (197)
                      +...++.++||||+||++|+|++|.+||.+....+.+.++...++.+..+.+....  +.+ ...++........ ....
T Consensus       244 ~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~p~  321 (440)
T PTZ00036        244 GATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN--PNYADIKFPDVKPKDLKKVFPK  321 (440)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc--hhhhcccCCccCchhHHHHhcc
Confidence            75568999999999999999999999999998888888888877766543222111  000 0011111111111 1223


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+.++++||.+||..||++|||+.|+++||||++..+
T Consensus       322 ~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        322 GTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD  359 (440)
T ss_pred             CCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence            47789999999999999999999999999999987654

>KOG0666|consensus

Probab=99.97  E-value=6.8e-31  Score=187.57  Aligned_cols=178  Identities=46%  Similarity=0.815  Sum_probs=145.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC----------CCCcEEEeecCCccccCCCcc---ccccceecccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP----------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYR   67 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp----------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~   67 (197)
                      +.++...+++++-||++|+.||         |||          +.+.|||+|+|+++.+..+-.   .....+.|.+|+
T Consensus       127 ~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYR  206 (438)
T KOG0666|consen  127 KQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYR  206 (438)
T ss_pred             ccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEec
Confidence            4689999999999999999999         888          347899999999998765432   233457799999


Q ss_pred             CchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC---------hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy6390          68 APEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS---------EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF  138 (197)
Q Consensus        68 aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (197)
                      |||++.+.+.|+++.|+|++||++.||++-.+.|.+..         ..+++.+|+++++.|....|+.+...++++..+
T Consensus       207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~l  286 (438)
T KOG0666|consen  207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLL  286 (438)
T ss_pred             ChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHH
Confidence            99999999989999999999999999999988887642         457889999999999999999999888885433


Q ss_pred             cccc-----h---hhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         139 PEWS-----N---FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       139 ~~~~-----~---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ..+.     +   ...-.....-+..+.+|+.+||..||.+|+|++++++|+||+.-
T Consensus       287 s~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  287 SDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             HHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence            3322     1   11112224455669999999999999999999999999999855

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.97  E-value=3.1e-30  Score=192.99  Aligned_cols=178  Identities=47%  Similarity=0.862  Sum_probs=138.5

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..++.++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+.
T Consensus       100 ~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (309)
T cd07872         100 IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS  179 (309)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCC
Confidence            488999999999999999999         666      55778999999997654433333345678999999999765


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC-CCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK-TTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  154 (197)
                      ..++.++|+||+||++++|++|+.||.+.+..+....+.+..+.+..+.|+.......+. ...+...........+.++
T Consensus       180 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (309)
T cd07872         180 SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLD  259 (309)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCC
Confidence            558899999999999999999999999998888888888888887776665544332221 1112221112222335678


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .++.+++.+||+.||.+|||++|+++||||+...
T Consensus       260 ~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         260 TEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             HHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            8999999999999999999999999999999764

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.97  E-value=2.8e-30  Score=191.02  Aligned_cols=175  Identities=69%  Similarity=1.171  Sum_probs=139.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        96 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (285)
T cd07861          96 QYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLG  175 (285)
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcC
Confidence            4689999999999999999999         555      6678999999999766544333334566889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...++.++|+||+||+++++++|+.||.+....+....+.+..+.+....|+.......+....+.+...........++
T Consensus       176 ~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (285)
T cd07861         176 SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLD  255 (285)
T ss_pred             CCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCC
Confidence            55578899999999999999999999999888888777777777666666655554444444444443333344456689


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .++.++|.+||+.||++|||+.+++.||||
T Consensus       256 ~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         256 EDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0671|consensus

Probab=99.97  E-value=1.9e-31  Score=194.33  Aligned_cols=179  Identities=32%  Similarity=0.480  Sum_probs=134.2

Q ss_pred             HHhhhcCCHHHHHHHHHHHHhhhccc---------ccC--------------------------CCCcEEEeecCCcccc
Q psy6390           6 QLEWEQVGTYQVKITTRLFLQATSFC---------IKP--------------------------KSNIVKVADFGLARAF   50 (197)
Q Consensus         6 ~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp--------------------------~~~~vkl~Dfg~s~~~   50 (197)
                      +.+..+++.++++.+..|++++++||         |||                          ++..|+++|||.|...
T Consensus       183 ~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~  262 (415)
T KOG0671|consen  183 ENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFD  262 (415)
T ss_pred             cCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCccee
Confidence            33556799999999999999999999         666                          2445799999999744


Q ss_pred             CCCccccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCC
Q psy6390          51 GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK  130 (197)
Q Consensus        51 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (197)
                      ...   ....+.|..|+|||++.+-+ ++..+|+||+||||+|+.+|...|.+-++.+++.-|.+.+++.+.........
T Consensus       263 ~e~---hs~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~  338 (415)
T KOG0671|consen  263 HEH---HSTIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRK  338 (415)
T ss_pred             ccC---cceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhh
Confidence            322   24557899999999999855 99999999999999999999999999999999998999999777654443322


Q ss_pred             CCCCCCCCcccchhh--------------hhhccCC---CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         131 LPDYKTTFPEWSNFC--------------LDKHVKN---LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       131 ~~~~~~~~~~~~~~~--------------~~~~~~~---~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ..-+....-.|.+..              +......   .-..+.||+++||..||++|+|+.|+|.||||+...
T Consensus       339 ~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  339 EKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             HhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            111111111111111              1111111   223578999999999999999999999999998764

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=4.8e-30  Score=192.61  Aligned_cols=174  Identities=39%  Similarity=0.704  Sum_probs=125.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCC----------CCcEEEeecCCccccCCCc---cccccceeccceeC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPK----------SNIVKVADFGLARAFGVPV---RIYTHEVVTLWYRA   68 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~----------~~~vkl~Dfg~s~~~~~~~---~~~~~~~~~~~y~a   68 (197)
                      .+++..++.++.|++.||+||         |||+          ++.+||+|||.++......   .......+|+.|+|
T Consensus       104 ~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07868         104 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccC
Confidence            589999999999999999999         6663          3568999999998664322   12234577999999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh---------HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCc
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---------IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP  139 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (197)
                      ||++.+...++.++|+||+||+++++++|..||.....         .+.+..+....+.+....|......+.......
T Consensus       184 PE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (317)
T cd07868         184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK  263 (317)
T ss_pred             CHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhh
Confidence            99998755588999999999999999999999975432         355666777777666555544333222111110


Q ss_pred             cc---------chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         140 EW---------SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       140 ~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..         .....+......+..+.+||.+||+.||++|||++|+++||||
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         264 DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            00         0011112223356778999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.97  E-value=1.9e-29  Score=188.15  Aligned_cols=179  Identities=44%  Similarity=0.861  Sum_probs=138.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        99 ~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  178 (301)
T cd07873          99 NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLG  178 (301)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhC
Confidence            4588999999999999999999         666      5577899999998765433333334466889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC-CCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK-TTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  153 (197)
                      ...++.++|+||+||++|+|++|+.||...+..+....+....+.+....|+.......+. ...+.....+.....+.+
T Consensus       179 ~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (301)
T cd07873         179 STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRL  258 (301)
T ss_pred             CCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCC
Confidence            5557889999999999999999999999988888888888888777776665543322221 222222223333344567


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      +..+.+||.+||+.||.+|||++|+++||||+..-
T Consensus       259 ~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         259 DSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            88999999999999999999999999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.97  E-value=1.1e-29  Score=187.81  Aligned_cols=174  Identities=52%  Similarity=0.932  Sum_probs=130.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||++||.||         |+|      +++.++|+|||.++.............++..|+|||.+.+
T Consensus        94 ~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  173 (284)
T cd07839          94 GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG  173 (284)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhC
Confidence            4689999999999999999999         565      5577899999999866543333334567889999999877


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCC-CCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc-hhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPL-FQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS-NFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  152 (197)
                      ...++.++|+||+||++|+|++|..| |.+.+....+..+.+..+.+....++.......+. ..+... ........+.
T Consensus       174 ~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  252 (284)
T cd07839         174 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK-PYPMYPATTSLVNVVPK  252 (284)
T ss_pred             CcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccc-ccCCCCCcchhhhhccc
Confidence            55578999999999999999998777 45556666677777766666555554444333321 111111 1112333466


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .+.++.+++.+||+.||.+|||+++++.||||
T Consensus       253 ~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         253 LNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            88999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0198|consensus

Probab=99.97  E-value=2e-30  Score=190.22  Aligned_cols=151  Identities=29%  Similarity=0.397  Sum_probs=117.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------C-CCcEEEeecCCccccCC---CccccccceeccceeCchh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------K-SNIVKVADFGLARAFGV---PVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~-~~~vkl~Dfg~s~~~~~---~~~~~~~~~~~~~y~aPE~   71 (197)
                      +|+|..++.+++||++||+||         |||      . ++.+||+|||+++....   .........||+.|||||+
T Consensus       113 ~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEv  192 (313)
T KOG0198|consen  113 KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEV  192 (313)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchh
Confidence            699999999999999999999         776      3 57889999999987653   1122345689999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCC-CChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQG-DSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +........++||||+||++.||++|..||.. ........++......                           ....
T Consensus       193 i~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~---------------------------P~ip  245 (313)
T KOG0198|consen  193 IRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSL---------------------------PEIP  245 (313)
T ss_pred             hcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCC---------------------------CCCC
Confidence            98532234599999999999999999999987 3434444343321100                           0122


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ..+|.++.+++.+|+..||++||||+++|.|||.++..
T Consensus       246 ~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  246 DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             cccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence            44789999999999999999999999999999997644

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=1.9e-29  Score=186.80  Aligned_cols=174  Identities=36%  Similarity=0.623  Sum_probs=126.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.|++.||+||         |||      .++.++|+|||.+........ ......++..|+|||++.
T Consensus        95 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  174 (287)
T cd07848          95 NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLL  174 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHc
Confidence            4689999999999999999999         666      557789999999987643221 222346789999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC-CCCcc--cchhhhhhcc
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK-TTFPE--WSNFCLDKHV  150 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~  150 (197)
                      +.. ++.++|+||+||++|++++|+.||.+.+..+....+....+..+...+......+.+. ...+.  ..........
T Consensus       175 ~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (287)
T cd07848         175 GAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYL  253 (287)
T ss_pred             CCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhh
Confidence            755 8899999999999999999999999888777776666655554332221111111100 00000  0011112223


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..++..+.+|+.+||+.||++|||++++++||||
T Consensus       254 ~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         254 GILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            4578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.96  E-value=2.9e-29  Score=185.86  Aligned_cols=171  Identities=45%  Similarity=0.770  Sum_probs=131.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.||+||         |||      +++.++|+|||.+....... ......++..|+|||++.+
T Consensus       103 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~  181 (288)
T cd07863         103 PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQM-ALTPVVVTLWYRAPEVLLQ  181 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCcc-cCCCccccccccCchHhhC
Confidence            3489999999999999999999         666      56778999999997664322 1223467889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+....+...++....+.+....++........  .+............+.++
T Consensus       182 ~~-~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  258 (288)
T cd07863         182 ST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRG--AFSPRGPRPVQSVVPEIE  258 (288)
T ss_pred             CC-CCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccccc--ccCCCCCCchHHhCcCcC
Confidence            44 889999999999999999999999988888888888877766655544432221111  111111222333445678


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++.+||+.||++|||+.+++.||||
T Consensus       259 ~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         259 ESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             HHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0591|consensus

Probab=99.96  E-value=2.6e-30  Score=182.19  Aligned_cols=140  Identities=25%  Similarity=0.378  Sum_probs=118.2

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc-------------ccC------CCCcEEEeecCCccccCCCccccccceeccceeC
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC-------------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRA   68 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l-------------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~a   68 (197)
                      ..+.++|..+++++.|++.||.++             |||      .++.|||+|||+++.+++........+||+.||+
T Consensus       117 qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMS  196 (375)
T KOG0591|consen  117 QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMS  196 (375)
T ss_pred             ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccC
Confidence            345799999999999999999998             888      6688999999999999988888888999999999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ||++.+.+ |+.++||||+||++|||..-++||.+.+-.+.-.+|...-.++-+                          
T Consensus       197 PE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p--------------------------  249 (375)
T KOG0591|consen  197 PERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLP--------------------------  249 (375)
T ss_pred             HHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCc--------------------------
Confidence            99999866 999999999999999999999999999655555555442111100                          


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCH
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINA  175 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~  175 (197)
                       ....|.++..||.-|++.||++||+.
T Consensus       250 -~~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  250 -DEHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             -HHHhhhHHHHHHHHHccCCcccCCCc
Confidence             03367889999999999999999985

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.96  E-value=2.4e-29  Score=192.22  Aligned_cols=179  Identities=33%  Similarity=0.510  Sum_probs=129.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |||      +++.+||+|||+++...... ......+|..|+|||++.+
T Consensus       121 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~-~~~~~~~t~~y~aPE~~~~  199 (364)
T cd07875         121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG  199 (364)
T ss_pred             hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC-cccCCcccCCcCCHHHHhC
Confidence            4588999999999999999999         666      56789999999998654332 2234467999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCC--------CCCC-----CCCCccc
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--------LPDY-----KTTFPEW  141 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-----~~~~~~~  141 (197)
                      .. ++.++||||+||++|+|++|..||.+.+..+....+....+.+.++.+.....        .+.+     ....+..
T Consensus       200 ~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (364)
T cd07875         200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV  278 (364)
T ss_pred             CC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccc
Confidence            44 88999999999999999999999999988888888777666654432221110        0000     0000111


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ............+..+++||.+||+.||++|||++++++||||..+.++
T Consensus       279 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~  327 (364)
T cd07875         279 LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP  327 (364)
T ss_pred             cccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCc
Confidence            0000111112345688999999999999999999999999999765443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=1.3e-29  Score=192.29  Aligned_cols=179  Identities=35%  Similarity=0.589  Sum_probs=132.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |||      +++.+||+|||+++.....   .....++..|+|||++.+
T Consensus       113 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~  189 (343)
T cd07878         113 QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE---MTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC---cCCccccccccCchHhcC
Confidence            4699999999999999999999         777      4567899999999865432   234468999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC--CCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL--PDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...++.++||||+||++|+|++|..||.+.+..+.+..+....+.+...........  ..+...++.............
T Consensus       190 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (343)
T cd07878         190 WMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRG  269 (343)
T ss_pred             CccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccC
Confidence            555889999999999999999999999988887777777766655443322211110  000111111112222233345


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      .+..+.+|+.+||..||++|||++|+++||||.+..++.
T Consensus       270 ~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~~  308 (343)
T cd07878         270 ANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPE  308 (343)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCCc
Confidence            677899999999999999999999999999998765543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.96  E-value=1.5e-29  Score=187.02  Aligned_cols=175  Identities=59%  Similarity=1.037  Sum_probs=138.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        95 ~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  174 (284)
T cd07860          95 SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG  174 (284)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEec
Confidence            4689999999999999999999         555      5678899999998766543333334456788999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...++.++|+||+||+++++++|..||...+..+...++.+..+.+....++.....+.+...++.+.........+.++
T Consensus       175 ~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
T cd07860         175 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLD  254 (284)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCC
Confidence            55568899999999999999999999998888888888777777766555554444444444444444444444456688


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.++|.+||+.||++|||+++++.||||
T Consensus       255 ~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         255 EDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0605|consensus

Probab=99.96  E-value=1.2e-29  Score=191.87  Aligned_cols=157  Identities=28%  Similarity=0.390  Sum_probs=126.0

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCC----C---------------
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGV----P---------------   53 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~----~---------------   53 (197)
                      +...|+|+.++.|+.+++.|++-+         |||      .+|++||+|||++..+..    .               
T Consensus       234 ~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~  313 (550)
T KOG0605|consen  234 RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEA  313 (550)
T ss_pred             hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccC
Confidence            456799999999999999999988         888      558999999999854311    0               


Q ss_pred             --ccc--------------------------cccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC
Q psy6390          54 --VRI--------------------------YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS  105 (197)
Q Consensus        54 --~~~--------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~  105 (197)
                        ...                          ....+|||-|+|||++.+.+ |+..+|.||+|||+||||.|.+||.+.+
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-Y~~~cDwWSLG~ImyEmLvGyPPF~s~t  392 (550)
T KOG0605|consen  314 KPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-YGKECDWWSLGCIMYEMLVGYPPFCSET  392 (550)
T ss_pred             CCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-CCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence              000                          11348899999999999866 9999999999999999999999999999


Q ss_pred             hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCC---HHHHhcCc
Q psy6390         106 EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN---AENALKHK  182 (197)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s---~~ell~hp  182 (197)
                      +.+...++..--..         -.                .+....++.+++|||.++|+ ||++|+.   ++||.+||
T Consensus       393 p~~T~rkI~nwr~~---------l~----------------fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HP  446 (550)
T KOG0605|consen  393 PQETYRKIVNWRET---------LK----------------FPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHP  446 (550)
T ss_pred             HHHHHHHHHHHhhh---------cc----------------CCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCC
Confidence            99999988762211         11                11114467899999999999 9999995   89999999


Q ss_pred             ccCCCCCcch
Q psy6390         183 YFADKTDLPK  192 (197)
Q Consensus       183 ~~~~~~~~~~  192 (197)
                      ||+++ +++.
T Consensus       447 fF~~v-~W~~  455 (550)
T KOG0605|consen  447 FFKGV-DWDH  455 (550)
T ss_pred             ccccC-Ccch
Confidence            99976 4443

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.96  E-value=4.9e-29  Score=190.16  Aligned_cols=180  Identities=32%  Similarity=0.520  Sum_probs=128.3

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..+..++.|+++||+||         |||      +++.++|+|||+++...... ......+|..|+|||.+.
T Consensus       117 ~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~  195 (359)
T cd07876         117 HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVIL  195 (359)
T ss_pred             hccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCc-cCCCCcccCCCCCchhcc
Confidence            34589999999999999999999         666      56788999999997653322 123347789999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCC-----------CC--CCCCCCCcc
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-----------KL--PDYKTTFPE  140 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~--~~~~~~~~~  140 (197)
                      +.. ++.++|+||+||++|+|++|..||.+.+..+....+....+.+.........           ..  ..+...++.
T Consensus       196 ~~~-~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
T cd07876         196 GMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPD  274 (359)
T ss_pred             CCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccc
Confidence            644 8899999999999999999999999888777777666665554432111100           00  000011111


Q ss_pred             cchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      +............+..+.+||.+||+.||++|||++|+++||||+.+.++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~  324 (359)
T cd07876         275 WIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDP  324 (359)
T ss_pred             cccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCc
Confidence            11111111223356789999999999999999999999999999865443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0582|consensus

Probab=99.96  E-value=1.7e-29  Score=187.66  Aligned_cols=163  Identities=23%  Similarity=0.305  Sum_probs=124.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc----ccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY----THEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~----~~~~~~~~y~aPE   70 (197)
                      ..++|..|..+++++++||.||         ||+      ++|.|||+|||.+..+-......    .+.+||++|||||
T Consensus       121 ~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPE  200 (516)
T KOG0582|consen  121 DGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPE  200 (516)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChH
Confidence            4699999999999999999999         554      77899999999987553322221    4558999999999


Q ss_pred             hhc-CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLL-GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~-~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      ++. ...+|+.|+||||||++..|+.+|..||....+...+-.....  .++.-.   ...              ...+.
T Consensus       201 vl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn--~pp~~~---t~~--------------~~~d~  261 (516)
T KOG0582|consen  201 VLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQN--DPPTLL---TSG--------------LDKDE  261 (516)
T ss_pred             HhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC--CCCCcc---ccc--------------CChHH
Confidence            954 4455999999999999999999999999998887776444332  221100   000              01111


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ....+..++.++..||+.||++||||+++++|+||+...+.+
T Consensus       262 ~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~  303 (516)
T KOG0582|consen  262 DKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKE  303 (516)
T ss_pred             hhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchh
Confidence            244667899999999999999999999999999999775544

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=1.4e-29  Score=191.50  Aligned_cols=182  Identities=33%  Similarity=0.525  Sum_probs=130.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc---cccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV---RIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~---~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|+++||+||         |||      +++.+||+|||.++......   .......++..|+|||+
T Consensus        98 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~  177 (338)
T cd07859          98 DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL  177 (338)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHH
Confidence            4599999999999999999999         666      56788999999997543211   11234578999999999


Q ss_pred             hcCC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhhh
Q psy6390          72 LLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDK  148 (197)
Q Consensus        72 ~~~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  148 (197)
                      +.+. ..++.++||||+||++|++++|+.||.+.+.......+....+.+............  .+...+..........
T Consensus       178 ~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  257 (338)
T cd07859         178 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQ  257 (338)
T ss_pred             HhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHH
Confidence            8652 347889999999999999999999999888777777766666655443222111100  0000000000111122


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ..+..+..+.+++.+||+.||++|||++++++||||++.....
T Consensus       258 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~  300 (338)
T cd07859         258 KFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVE  300 (338)
T ss_pred             hcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccc
Confidence            2345778899999999999999999999999999998765543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.96  E-value=8.4e-29  Score=185.27  Aligned_cols=178  Identities=43%  Similarity=0.748  Sum_probs=135.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.++..++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus       103 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  182 (309)
T cd07845         103 TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLG  182 (309)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcC
Confidence            5689999999999999999999         666      5678999999999876543333333455788999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC-CCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  153 (197)
                      ...++.++|+||+||++|++++|..||.+.+....+..+....+.+....++.....+.... .................
T Consensus       183 ~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (309)
T cd07845         183 CTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWL  262 (309)
T ss_pred             CCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhcccc
Confidence            56578999999999999999999999999998888888888877776665554332221110 00000001111222446


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      +..+.++|.+||+.||++|||++++++||||++.
T Consensus       263 ~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         263 SEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence            8899999999999999999999999999999855

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PTZ00284 protein kinase; Provisional

Probab=99.96  E-value=1.9e-29  Score=198.37  Aligned_cols=175  Identities=23%  Similarity=0.249  Sum_probs=125.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccCCCC----------------------cEEEeecCCccccCCCcccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKPKSN----------------------IVKVADFGLARAFGVPVRIY   57 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp~~~----------------------~vkl~Dfg~s~~~~~~~~~~   57 (197)
                      ..+++..++.++.||+.||+||          |||+|.                      .+||+|||.+......   .
T Consensus       226 ~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~---~  302 (467)
T PTZ00284        226 GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS---R  302 (467)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccc---c
Confidence            4699999999999999999999          777442                      3899999987543222   2


Q ss_pred             ccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCC---C
Q psy6390          58 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD---Y  134 (197)
Q Consensus        58 ~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  134 (197)
                      ...+||+.|+|||++.+.. ++.++||||+||++|+|++|+.||.+.+..+.+..+...++.++....... ....   +
T Consensus       303 ~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~-~~~~~~~~  380 (467)
T PTZ00284        303 TAIVSTRHYRSPEVVLGLG-WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRC-GTEEARLL  380 (467)
T ss_pred             ccccCCccccCcHHhhcCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhc-cchhHHHH
Confidence            3457899999999998754 899999999999999999999999998888888888887776544321110 0000   0


Q ss_pred             C---CC-Ccccchhhhhhc-------cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         135 K---TT-FPEWSNFCLDKH-------VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       135 ~---~~-~~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .   .. .+..........       ....+..+.|||.+||++||++|||++|+|+||||++...
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  446 (467)
T PTZ00284        381 YNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP  446 (467)
T ss_pred             hhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence            0   00 000000000000       0112456889999999999999999999999999987543

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.96  E-value=7.1e-29  Score=189.02  Aligned_cols=179  Identities=35%  Similarity=0.526  Sum_probs=127.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |||      +++.+||+|||.++...... ......+|..|+|||++.+
T Consensus       114 ~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~  192 (355)
T cd07874         114 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG  192 (355)
T ss_pred             hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc-ccCCccccCCccCHHHHcC
Confidence            4588999999999999999999         777      55778999999998654332 2234578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCC--------CCCCC-----CCCccc
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--------LPDYK-----TTFPEW  141 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~~  141 (197)
                      .. ++.++|+||+||++|+|++|+.||.+.+..+....+....+.+..+.+.....        .+.+.     ...+..
T Consensus       193 ~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (355)
T cd07874         193 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS  271 (355)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccc
Confidence            44 88999999999999999999999998887777776666655543322111110        00000     000000


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ............+..+++||.+||..||++|||+.|+++||||....+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~  320 (355)
T cd07874         272 LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDP  320 (355)
T ss_pred             ccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccCh
Confidence            0000111123356788999999999999999999999999999865443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0694|consensus

Probab=99.96  E-value=4.2e-29  Score=193.77  Aligned_cols=153  Identities=23%  Similarity=0.351  Sum_probs=129.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      +.|+|..++.|+.+++.||.||               |....|++||+|||+++..........+.+||+.|||||++.+
T Consensus       463 ~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e  542 (694)
T KOG0694|consen  463 DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTE  542 (694)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhcc
Confidence            5699999999999999999999               4446699999999999977644455667799999999999988


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. |+.++|.||+||++|+|+.|..||.+.+..+....|...                  ...+           +..+|
T Consensus       543 ~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d------------------~~~y-----------P~~ls  592 (694)
T KOG0694|consen  543 QS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND------------------EVRY-----------PRFLS  592 (694)
T ss_pred             Cc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------------------CCCC-----------CCccc
Confidence            56 999999999999999999999999999999998887641                  0111           14488


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCCCCcchh
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADKTDLPKF  193 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~~~~~~~  193 (197)
                      .+++++++++|..||++|+.     +++|.+||||+.+ +++++
T Consensus       593 ~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i-~w~~L  635 (694)
T KOG0694|consen  593 KEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI-DWDDL  635 (694)
T ss_pred             HHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC-CHHHH
Confidence            99999999999999999996     5789999999977 45443

>KOG0585|consensus

Probab=99.96  E-value=2.2e-29  Score=188.30  Aligned_cols=149  Identities=22%  Similarity=0.326  Sum_probs=124.0

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCC-----CccccccceeccceeCchh
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGV-----PVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~-----~~~~~~~~~~~~~y~aPE~   71 (197)
                      +++.++++|+++++.||+||         |||      ++++|||+|||.+..+..     ........+||+.|+|||.
T Consensus       207 ls~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~  286 (576)
T KOG0585|consen  207 LSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPEL  286 (576)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHh
Confidence            89999999999999999999         888      668999999999986622     2222334689999999999


Q ss_pred             hcCC---CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          72 LLGS---QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        72 ~~~~---~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      +.+.   ...+.+.||||+||+||-++.|+.||.+....+...+|.......+..                         
T Consensus       287 c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~-------------------------  341 (576)
T KOG0585|consen  287 CSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN-------------------------  341 (576)
T ss_pred             hcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc-------------------------
Confidence            9762   235689999999999999999999999999999888887643332211                         


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                        +.+...++|||.+||++||++|++..+|..|||..+.
T Consensus       342 --pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  342 --PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             --ccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence              2356889999999999999999999999999998654

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=1e-28  Score=185.32  Aligned_cols=174  Identities=40%  Similarity=0.714  Sum_probs=125.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC----------CCCcEEEeecCCccccCCCcc---ccccceeccceeC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP----------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRA   68 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp----------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~a   68 (197)
                      .+++..+..++.|++.||.||         |||          +++.+||+|||+++.......   ......+|..|+|
T Consensus       104 ~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07867         104 QLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccC
Confidence            488999999999999999999         665          335689999999986643221   1234567899999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh---------HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCc
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---------IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP  139 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (197)
                      ||.+.+...++.++||||+||++|++++|..||.....         .....++...++.+....|......+.+.....
T Consensus       184 PE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (317)
T cd07867         184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQK  263 (317)
T ss_pred             cHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhh
Confidence            99997755578999999999999999999999975432         344566677777666655554433322211000


Q ss_pred             cc---------chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         140 EW---------SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       140 ~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..         .....+......+..+.+|+.+||..||.+|||++|+++||||
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         264 DFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            00         0011111223356678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.96  E-value=1.1e-28  Score=183.37  Aligned_cols=178  Identities=57%  Similarity=1.063  Sum_probs=141.5

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccCC-------CCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKPK-------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp~-------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      +++..+..++.||+.||+||         |+|+       +..+||+|||.+..............++..|+|||.+.+.
T Consensus        99 ~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  178 (294)
T PLN00009         99 KNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGS  178 (294)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCC
Confidence            68888999999999999999         6663       3568999999997654433333344678899999998765


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      ..++.++|+||+||++|++++|..||...+..+...++....+.+....|......+.+....+.+.........+..+.
T Consensus       179 ~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (294)
T PLN00009        179 RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEP  258 (294)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCCh
Confidence            55788999999999999999999999988888888888887777777776655555555444444433333444567889


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .+.+++.+||+.+|++||+++++++||||++...
T Consensus       259 ~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~  292 (294)
T PLN00009        259 AGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD  292 (294)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence            9999999999999999999999999999997654

>KOG0665|consensus

Probab=99.96  E-value=3.1e-29  Score=179.29  Aligned_cols=186  Identities=32%  Similarity=0.480  Sum_probs=141.8

Q ss_pred             hhhHHHhhhcCCHHHHHHHHHHHHhhhccc---------ccCCCCc------EEEeecCCccccCCCccccccceeccce
Q psy6390           2 CNLIQLEWEQVGTYQVKITTRLFLQATSFC---------IKPKSNI------VKVADFGLARAFGVPVRIYTHEVVTLWY   66 (197)
Q Consensus         2 ~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~------vkl~Dfg~s~~~~~~~~~~~~~~~~~~y   66 (197)
                      |+++.++   ++=..+.++++|++.|++||         |||+|..      +||.|||+|+..... ...+..+.+..|
T Consensus       108 ~~vi~~e---lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~-~~mtpyVvtRyy  183 (369)
T KOG0665|consen  108 CQVILME---LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD-FMMTPYVVTRYY  183 (369)
T ss_pred             HHHHHHh---cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc-cccCchhheeec
Confidence            4555543   77888999999999999999         8886644      599999999866544 345567889999


Q ss_pred             eCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC-------------CC
Q psy6390          67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-------------PD  133 (197)
Q Consensus        67 ~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~  133 (197)
                      +|||++.+.. +...+||||+||++.+|+.|...|.+.+..++..++.+.++.+.+.+...+...             ..
T Consensus       184 rapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~  262 (369)
T KOG0665|consen  184 RAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAIS  262 (369)
T ss_pred             cCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccc
Confidence            9999999866 889999999999999999999999999999999999999999888543322210             11


Q ss_pred             CCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                      +...+++..-....+..+.-+..+++++.+||-.||++|.+++++|+|||++=|-+.++
T Consensus       263 f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~~~~e  321 (369)
T KOG0665|consen  263 FSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWYDPDE  321 (369)
T ss_pred             hhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeeccccc
Confidence            22222222111111112345567899999999999999999999999999984433333

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.96  E-value=1.2e-28  Score=182.10  Aligned_cols=174  Identities=65%  Similarity=1.154  Sum_probs=138.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+.
T Consensus        95 ~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  174 (283)
T cd07835          95 GLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGS  174 (283)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecC
Confidence            589999999999999999999         455      56788999999997654333323344568899999998765


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      ..++.++|+||+|+++|++++|..||...+.......+.+..+.+....++.....+.+...++.+.........+.++.
T Consensus       175 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (283)
T cd07835         175 RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDE  254 (283)
T ss_pred             cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCH
Confidence            55788999999999999999999999988888888888777777766666555555555444444433333444567889


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .+.+++.+||+.||++|||+++++.||||
T Consensus       255 ~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         255 DGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            99999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0032|consensus

Probab=99.96  E-value=1.6e-28  Score=186.31  Aligned_cols=149  Identities=31%  Similarity=0.437  Sum_probs=127.9

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC----------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP----------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp----------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ++|..+..+++|+++|++||         +||          .+..++++|||+|..... .......+||+.|+|||++
T Consensus       132 ~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~-~~~~~~~~Gtp~y~APEvl  210 (382)
T KOG0032|consen  132 YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP-GERLHTIVGTPEYVAPEVL  210 (382)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-CceEeeecCCccccCchhh
Confidence            99999999999999999999         777          235799999999998876 4456677999999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .... ++..+||||+|+++|.|+.|..||.+.+.......+...-.....                         ..++.
T Consensus       211 ~~~~-y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~-------------------------~~w~~  264 (382)
T KOG0032|consen  211 GGRP-YGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTS-------------------------EPWDD  264 (382)
T ss_pred             cCCC-CCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCC-------------------------CCccc
Confidence            8745 999999999999999999999999999988888776553222222                         22366


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ++..+++++++||..||.+|+|++++|+|||+++.
T Consensus       265 is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  265 ISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             cCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence            88999999999999999999999999999999875

>KOG0597|consensus

Probab=99.96  E-value=2.6e-29  Score=191.75  Aligned_cols=151  Identities=28%  Similarity=0.438  Sum_probs=127.9

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+.++|+.++.+++|+++||.||         +||      +++++|+||||+|+.++......+..-||+.|||||++
T Consensus        93 ~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv  172 (808)
T KOG0597|consen   93 QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELV  172 (808)
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHH
Confidence            346799999999999999999999         666      66889999999999988877777777899999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+ .+|+..+|.||+||++||++.|++||-...-......|......++                             ..
T Consensus       173 ~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p-----------------------------~~  222 (808)
T KOG0597|consen  173 EE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP-----------------------------ST  222 (808)
T ss_pred             cC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc-----------------------------cc
Confidence            87 4499999999999999999999999987765555555543222211                             34


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .|..+++++..+|.+||.+|+|..+++.|||.++..
T Consensus       223 ~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  223 ASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             ccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence            788999999999999999999999999999987543

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.96  E-value=1.8e-28  Score=182.17  Aligned_cols=175  Identities=51%  Similarity=0.901  Sum_probs=133.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus       101 ~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  180 (293)
T cd07843         101 QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLG  180 (293)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcC
Confidence            3589999999999999999999         666      5678999999999876554333344567889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC-CCcccchhhhhhccCC-
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKN-  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-  152 (197)
                      ....+.++|+||+|++++++++|..||..........++....+.+....|+.....+.... ..............+. 
T Consensus       181 ~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (293)
T cd07843         181 AKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPAL  260 (293)
T ss_pred             CccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhcccccc
Confidence            55578899999999999999999999999888888888887777766655554433322221 1111111111222233 


Q ss_pred             -CCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         153 -LDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       153 -~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                       ++..+.++|.+||+.||++|||++|++.||||
T Consensus       261 ~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         261 SLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             CCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence             48889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.96  E-value=9.1e-29  Score=186.18  Aligned_cols=148  Identities=22%  Similarity=0.317  Sum_probs=119.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++.............||+.|+|||++.+
T Consensus        90 ~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  169 (323)
T cd05571          90 RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED  169 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcC
Confidence            4689999999999999999999         777      5567899999998754333333344578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...+.......+.....                             .....++
T Consensus       170 ~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-----------------------------~~p~~~~  219 (323)
T cd05571         170 ND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-----------------------------RFPRTLS  219 (323)
T ss_pred             CC-CCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-----------------------------CCCCCCC
Confidence            44 88999999999999999999999988776555544432100                             0013467


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ..+.++|.+||+.||++||     ++.++++||||++.
T Consensus       220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         220 PEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             HHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            8999999999999999999     89999999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG4717|consensus

Probab=99.96  E-value=7.7e-29  Score=187.72  Aligned_cols=152  Identities=26%  Similarity=0.433  Sum_probs=132.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC-------CcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS-------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+.|+-+++|+.||+.|+.||         |||+|       +.|||+|||++-.+.+... ..+.+|+..|-|||++.
T Consensus       113 ~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k-L~TsCGSLAYSAPEILL  191 (864)
T KOG4717|consen  113 EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK-LTTSCGSLAYSAPEILL  191 (864)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcch-hhcccchhhccCchhhh
Confidence            5799999999999999999999         99965       6689999999988866544 45669999999999999


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +....-+++||||+||++|-+..|+.||+..+..+.+..|+....                             ..+..+
T Consensus       192 GDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY-----------------------------tvPshv  242 (864)
T KOG4717|consen  192 GDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY-----------------------------TVPSHV  242 (864)
T ss_pred             cCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc-----------------------------cCchhh
Confidence            977556899999999999999999999999999888888765322                             222558


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      |.++++||.+||..||.+|.+.+||..|+|++.+....
T Consensus       243 S~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~  280 (864)
T KOG4717|consen  243 SKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGL  280 (864)
T ss_pred             hHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCc
Confidence            89999999999999999999999999999999886654

>KOG0604|consensus

Probab=99.96  E-value=3.4e-29  Score=177.96  Aligned_cols=155  Identities=22%  Similarity=0.291  Sum_probs=121.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC---------CCCcEEEeecCCccccCCCccccccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP---------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp---------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ...|+|.++..+++||..|+.||         |||         .|..+||+|||+|+....+.. ..+.+-|+.|.|||
T Consensus       155 ~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~-L~TPc~TPyYvaPe  233 (400)
T KOG0604|consen  155 DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGD-LMTPCFTPYYVAPE  233 (400)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCcc-ccCCcccccccCHH
Confidence            34699999999999999999999         888         556689999999987655433 34557799999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh----HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE----IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      ++-..+ |+..+|+||+||++|-|+.|.+||-....    .....+|....-..+                .        
T Consensus       234 vlg~eK-ydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP----------------~--------  288 (400)
T KOG0604|consen  234 VLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFP----------------E--------  288 (400)
T ss_pred             HhCchh-cCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCC----------------C--------
Confidence            997655 99999999999999999999999966543    222233322211111                1        


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                       +.+..+|+.++|+|+++|..+|++|+|+++++.|||+.+-...
T Consensus       289 -pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~v  331 (400)
T KOG0604|consen  289 -PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAV  331 (400)
T ss_pred             -hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccC
Confidence             2225688999999999999999999999999999999765443

>KOG0201|consensus

Probab=99.96  E-value=1.2e-29  Score=187.87  Aligned_cols=155  Identities=27%  Similarity=0.404  Sum_probs=125.5

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCCC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ   76 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~~   76 (197)
                      ++|.++..++++++.|+.||         ||.      .++.+||+|||.+.............+||+.|||||++.+..
T Consensus       108 ~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~  187 (467)
T KOG0201|consen  108 LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSG  187 (467)
T ss_pred             CccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhcccc
Confidence            48899999999999999999         555      447889999999988877655557789999999999999644


Q ss_pred             CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHh
Q psy6390          77 RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD  156 (197)
Q Consensus        77 ~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (197)
                       |+.++||||||++.++|.+|.+|+....+...+..|       +.+..+.+.                     ...|..
T Consensus       188 -Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI-------pk~~PP~L~---------------------~~~S~~  238 (467)
T KOG0201|consen  188 -YDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI-------PKSAPPRLD---------------------GDFSPP  238 (467)
T ss_pred             -ccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec-------cCCCCCccc---------------------cccCHH
Confidence             999999999999999999999999887764333333       222211111                     346788


Q ss_pred             HHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhhc
Q psy6390         157 GLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE  195 (197)
Q Consensus       157 ~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~~  195 (197)
                      +++++..||+.||+.||+|.++|+|+|++..+....+.+
T Consensus       239 ~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s~L~~  277 (467)
T KOG0201|consen  239 FKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKTSELKE  277 (467)
T ss_pred             HHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCchHHHH
Confidence            999999999999999999999999999998775554443

>KOG0669|consensus

Probab=99.96  E-value=1.8e-28  Score=170.84  Aligned_cols=181  Identities=39%  Similarity=0.702  Sum_probs=147.8

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc----ccccceeccceeCc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVVTLWYRAP   69 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~~~~y~aP   69 (197)
                      ..+++..++++++.++++||.|+         +|+      .++.++|+|||+++.++....    .++..+.|.+|++|
T Consensus       118 ~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrpp  197 (376)
T KOG0669|consen  118 KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPP  197 (376)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCH
Confidence            35799999999999999999999         555      568899999999987754322    34556779999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCC----Ccccchhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT----FPEWSNFC  145 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  145 (197)
                      |.+.+.+.++++.|+|+-||++.+|.++.+.+.+.++..++..|..+.+....+.|+.....+-++..    +++.....
T Consensus       198 EllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rk  277 (376)
T KOG0669|consen  198 ELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRK  277 (376)
T ss_pred             HHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhh
Confidence            99999998999999999999999999999999999999999999999999999999998877655433    22221111


Q ss_pred             hhhccC--CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         146 LDKHVK--NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       146 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .+....  .-+.++.||+.+||..||.+|+.+.+++.|.||.....
T Consensus       278 v~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~  323 (376)
T KOG0669|consen  278 VKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM  323 (376)
T ss_pred             hhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence            111111  13568899999999999999999999999999965433

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.96  E-value=5.3e-28  Score=179.72  Aligned_cols=175  Identities=54%  Similarity=1.022  Sum_probs=132.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------C-CCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------K-SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~-~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.||++||+||         |+|      . ++.++|+|||.+..............+++.|+|||.+.
T Consensus       105 ~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~  184 (295)
T cd07837         105 RPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLL  184 (295)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhh
Confidence            3589999999999999999999         555      3 67899999999876544333333446688899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +...++.++|+||+|+++|+|++|..||.+.+.......+....+.+....++.......+.. .+.+.........+.+
T Consensus       185 ~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  263 (295)
T cd07837         185 GSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHE-FPQWKPQDLSRAVPDL  263 (295)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhh-cCcccchhHHHhcccc
Confidence            655578999999999999999999999998888888877777766665555443332222111 1111111222233567


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      +..+.++|.+||..||++||++++++.||||+
T Consensus       264 ~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         264 SPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             CHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            88999999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.96  E-value=3.7e-28  Score=179.56  Aligned_cols=175  Identities=50%  Similarity=0.952  Sum_probs=139.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|+++||+||         |+|      +++.++|+|||.+..............++..|++||.+.+
T Consensus        95 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  174 (284)
T cd07836          95 GALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLG  174 (284)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcC
Confidence            3589999999999999999999         555      5678899999999765443333334567889999999877


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...++.++|+||+||+++++++|..||.+.+..+...++......+....+......+.+....+...........+..+
T Consensus       175 ~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
T cd07836         175 SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHAD  254 (284)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcC
Confidence            55578899999999999999999999999888888888888777777666665555455444444444333344445678


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++.+||+.||.+||+++++++||||
T Consensus       255 ~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         255 PLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             cHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            899999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.96  E-value=3.2e-28  Score=183.00  Aligned_cols=148  Identities=24%  Similarity=0.336  Sum_probs=119.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |||      +++.++|+|||+++.............||+.|+|||++.+
T Consensus        91 ~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (320)
T cd05590          91 RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQE  170 (320)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcC
Confidence            4699999999999999999999         666      5677899999998754333223334578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...+.......+......                             ....++
T Consensus       171 ~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~~~~~~  220 (320)
T cd05590         171 ML-YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV-----------------------------YPTWLS  220 (320)
T ss_pred             CC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCC-----------------------------CCCCCC
Confidence            44 789999999999999999999999988877666665431100                             012367


Q ss_pred             HhHHHHHHhhcccCCCCCCCH------HHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA------ENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~------~ell~hp~~~~~  187 (197)
                      .++.+++++||+.||++|+++      +++++||||+..
T Consensus       221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         221 QDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             HHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence            889999999999999999998      899999999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=6.1e-28  Score=178.15  Aligned_cols=175  Identities=59%  Similarity=1.098  Sum_probs=143.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        93 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  172 (282)
T cd07829          93 GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLG  172 (282)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcC
Confidence            4699999999999999999999         666      4577899999999866544333334456788999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...++.++|+||+||+++++++|..||...+..+.+.++....+.+....|+.......+...++.+.........+..+
T Consensus       173 ~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (282)
T cd07829         173 SKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLD  252 (282)
T ss_pred             CcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhccccc
Confidence            54588999999999999999999999999988888888888888887777766665555555555555444445556678


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++++||..||++||++++++.||||
T Consensus       253 ~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         253 PEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.95  E-value=7.4e-28  Score=179.22  Aligned_cols=180  Identities=45%  Similarity=0.816  Sum_probs=136.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|+++||+||         |+|      .++.++|+|||.+..............++..|+|||.+.+.
T Consensus        98 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  177 (298)
T cd07841          98 VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGA  177 (298)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCC
Confidence            589999999999999999999         666      55778999999998765543333344567889999998765


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      ..++.++|+||+||+++++++|..+|.+....+...++....+.+....++.......+... ...............+.
T Consensus       178 ~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  256 (298)
T cd07841         178 RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF-KPFPPTPLKQIFPAASD  256 (298)
T ss_pred             CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc-cccCCcchhhhcccccH
Confidence            55789999999999999999998889888877777777776666655555443333222111 11111222333456788


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      .+.+++.+||..||++|||+++++.||||++.....
T Consensus       257 ~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~  292 (298)
T cd07841         257 DALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT  292 (298)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence            999999999999999999999999999999865544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5e-28  Score=181.38  Aligned_cols=148  Identities=26%  Similarity=0.357  Sum_probs=118.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|++.||+||         |||      .++.++|+|||+++.............||+.|+|||++.+
T Consensus        88 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  167 (312)
T cd05585          88 GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLG  167 (312)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcC
Confidence            4699999999999999999999         777      5577899999998764333333344578999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...........+.....                             .....++
T Consensus       168 ~~-~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~  217 (312)
T cd05585         168 HG-YTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL-----------------------------RFPDGFD  217 (312)
T ss_pred             CC-CCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC-----------------------------CCCCcCC
Confidence            44 88999999999999999999999988776665555432100                             0113467


Q ss_pred             HhHHHHHHhhcccCCCCCC---CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI---NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~---s~~ell~hp~~~~~  187 (197)
                      ..+.+++.+||..||++||   ++.+++.||||++.
T Consensus       218 ~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         218 RDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            8899999999999999997   58999999999875

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.95  E-value=1.7e-28  Score=187.96  Aligned_cols=176  Identities=35%  Similarity=0.565  Sum_probs=129.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.|++.||+||         |||      +++.+||+|||+++...... .......++..|+|||.+.
T Consensus        98 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~  177 (372)
T cd07853          98 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILM  177 (372)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHc
Confidence            4589999999999999999999         777      45678999999997653321 2223346788999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC-----CCCCCCCcccchhhhhh
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-----PDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  148 (197)
                      +...++.++||||+||++++|++|+.||.+.+..+.+..+....+.+....+......     .......+.  ......
T Consensus       178 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  255 (372)
T cd07853         178 GSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPS--LPVLYT  255 (372)
T ss_pred             CCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCc--hHHhcc
Confidence            7555789999999999999999999999999888888888877776544322111000     000000000  000111


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .....+.++.+||.+||+.||++|||++|+++||||++.
T Consensus       256 ~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         256 LSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             cCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            224467899999999999999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.95  E-value=5.2e-28  Score=179.08  Aligned_cols=151  Identities=19%  Similarity=0.293  Sum_probs=116.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |||      +++.++|+|||++....... ......|+..|+|||.+.+
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~g~~~y~aPE~~~~  175 (285)
T cd05631          97 PGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-TVRGRVGTVGYMAPEVINN  175 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-eecCCCCCCCccCHhhhcC
Confidence            3589999999999999999999         676      45778999999997654322 2234578999999999986


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++||||+||++|++++|+.||...........+........                         .......+
T Consensus       176 ~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~s  229 (285)
T cd05631         176 EK-YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ-------------------------EEYSEKFS  229 (285)
T ss_pred             CC-CCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc-------------------------ccCCccCC
Confidence            44 88999999999999999999999987654322222221111100                         01113467


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+.+|+++||+.||++||+     ++++++||||++.
T Consensus       230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~  267 (285)
T cd05631         230 EDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI  267 (285)
T ss_pred             HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence            89999999999999999997     8999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.95  E-value=1e-27  Score=176.97  Aligned_cols=174  Identities=39%  Similarity=0.640  Sum_probs=125.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-----CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-----KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-----~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      ..+++.+++.++.|++.||+||         |+|     +++.++|+|||.+........ .....++..|+|||.+...
T Consensus        95 ~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~  173 (282)
T cd07831          95 RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPP-YTEYISTRWYRAPECLLTD  173 (282)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCC-cCCCCCCcccCChhHhhcC
Confidence            4589999999999999999999         555     227899999999976643322 1223568899999988665


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      ...+.++|+||+||+++++++|..||.+.+..+....+....+.+..................+..............+.
T Consensus       174 ~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (282)
T cd07831         174 GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASA  253 (282)
T ss_pred             CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccH
Confidence            55788999999999999999999999988877777776666555443211111100111111111111112223356789


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .+.+++.+||..||++||+++++++||||
T Consensus       254 ~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         254 EGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             HHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            99999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.95  E-value=1.4e-27  Score=176.65  Aligned_cols=176  Identities=44%  Similarity=0.881  Sum_probs=134.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++.+++.++.|+++||+||         |+|      +++.++|+|||.+........ ......++..|+|||.+.
T Consensus        94 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  173 (286)
T cd07832          94 RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY  173 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeee
Confidence            5689999999999999999999         555      567789999999886644321 223456788999999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC-CCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (197)
                      +...++.++|+||+||+++++++|.++|.+......+..+....+.+....++.......+.. ..+...........+.
T Consensus       174 ~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (286)
T cd07832         174 GARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPD  253 (286)
T ss_pred             ccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCC
Confidence            655578999999999999999999999988888888888877777766655555444333211 1111111122233456


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      .+..+.+++.+||..||++||+++++++||||.
T Consensus       254 ~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         254 ASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             ccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            678999999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=4.7e-28  Score=186.35  Aligned_cols=180  Identities=24%  Similarity=0.199  Sum_probs=122.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCC-CccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGV-PVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~-~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++.+++.++.|++.||+||         |||+      ++.++|+|||+++.... .........||+.|+|||++.
T Consensus       177 ~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  256 (391)
T PHA03212        177 RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLA  256 (391)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhc
Confidence            4689999999999999999999         7884      46689999999865322 112223457899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCC-------ChHHHHHHHHhhcCCCCCCCCCCCCCC-C-CC----CCCCcc
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGD-------SEIDQLFRIFRVLTTPTEDNWPGVSKL-P-DY----KTTFPE  140 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~----~~~~~~  140 (197)
                      +.. ++.++|+||+||++|++++|..||...       .....+..+....+.++.......... . .+    ......
T Consensus       257 ~~~-~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  335 (391)
T PHA03212        257 RDP-YGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRK  335 (391)
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCC
Confidence            644 899999999999999999998776432       234455666665555433221110000 0 00    000000


Q ss_pred             cchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ............++.++.+||.+||+.||++|||++|+++||||+++..+
T Consensus       336 ~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~  385 (391)
T PHA03212        336 PGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP  385 (391)
T ss_pred             CCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence            00000001112356789999999999999999999999999999987554

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.95  E-value=1.7e-27  Score=179.43  Aligned_cols=148  Identities=23%  Similarity=0.328  Sum_probs=119.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |||      +++.+||+|||+++.............|++.|+|||.+.+
T Consensus        96 ~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  175 (324)
T cd05589          96 DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTE  175 (324)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcC
Confidence            4699999999999999999999         666      5678999999998754332222334578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.+..+....+......                             ....++
T Consensus       176 ~~-~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~-----------------------------~p~~~~  225 (324)
T cd05589         176 TS-YTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR-----------------------------YPRFLS  225 (324)
T ss_pred             CC-CCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----------------------------CCCCCC
Confidence            44 789999999999999999999999988777666555431100                             113367


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ..+.++|.+||..||.+||     ++.++++||||++.
T Consensus       226 ~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         226 REAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence            8899999999999999999     69999999999875

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.95  E-value=1e-27  Score=180.32  Aligned_cols=148  Identities=22%  Similarity=0.304  Sum_probs=120.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      +.+++..++.++.|+++||.||         |||      +++.++|+|||.+..............|+..|+|||++.+
T Consensus        91 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (321)
T cd05591          91 RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQE  170 (321)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcC
Confidence            4689999999999999999999         666      5678899999998764333333344568999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|+.||...+.......+......                             ....++
T Consensus       171 ~~-~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~p~~~~  220 (321)
T cd05591         171 LE-YGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL-----------------------------YPVWLS  220 (321)
T ss_pred             CC-CCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-----------------------------CCCCCC
Confidence            44 889999999999999999999999988877776665431100                             002256


Q ss_pred             HhHHHHHHhhcccCCCCCC-------CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-------NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-------s~~ell~hp~~~~~  187 (197)
                      .++.+++.+||+.||++|+       +++++++||||...
T Consensus       221 ~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         221 KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence            8899999999999999999       99999999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=2.5e-27  Score=177.23  Aligned_cols=174  Identities=45%  Similarity=0.833  Sum_probs=131.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-----------ccccceec
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-----------IYTHEVVT   63 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-----------~~~~~~~~   63 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.+........           ......++
T Consensus       110 ~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (311)
T cd07866         110 VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVT  189 (311)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceec
Confidence            4699999999999999999999         666      567889999999876533211           11223567


Q ss_pred             cceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC--CCccc
Q psy6390          64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT--TFPEW  141 (197)
Q Consensus        64 ~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  141 (197)
                      ..|+|||.+.+...++.++|+||+||++++|++|+.||.+.+.......+....+.+....++.....+....  .....
T Consensus       190 ~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (311)
T cd07866         190 RWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNY  269 (311)
T ss_pred             cCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCC
Confidence            8899999987655578999999999999999999999999888888888777777666555544433333221  11111


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      . ..........+..+.+++.+||..||++|||+.+++.||||
T Consensus       270 ~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         270 P-RTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             C-ccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            1 11222335566889999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.95  E-value=1.1e-27  Score=180.70  Aligned_cols=148  Identities=24%  Similarity=0.337  Sum_probs=117.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.+++.++.||+.||+||         |||      +++.+||+|||+++.............||+.|+|||.+.+
T Consensus        90 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  169 (328)
T cd05593          90 RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLED  169 (328)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcC
Confidence            4589999999999999999999         777      5577899999998764332222334568999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|..||...+.......+.....                             .....++
T Consensus       170 ~~-~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-----------------------------~~p~~~~  219 (328)
T cd05593         170 ND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI-----------------------------KFPRTLS  219 (328)
T ss_pred             CC-CCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc-----------------------------cCCCCCC
Confidence            44 78999999999999999999999987766555444321000                             0113467


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      .++.+++.+||+.||++|+     +++++++||||.+.
T Consensus       220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         220 ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            8999999999999999997     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.95  E-value=1.4e-27  Score=179.28  Aligned_cols=148  Identities=24%  Similarity=0.352  Sum_probs=117.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|+++||+||         |||      +++.++|+|||.++.............||..|+|||++.+
T Consensus        91 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05620          91 GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQG  170 (316)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcC
Confidence            4689999999999999999999         666      5577899999998754322223344568999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...+.......+.....                             .....++
T Consensus       171 ~~-~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~  220 (316)
T cd05620         171 LK-YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTP-----------------------------HYPRWIT  220 (316)
T ss_pred             CC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----------------------------CCCCCCC
Confidence            44 88999999999999999999999988776655544422100                             0012367


Q ss_pred             HhHHHHHHhhcccCCCCCCCH-HHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA-ENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~-~ell~hp~~~~~  187 (197)
                      .++.+++.+||+.||++|+++ +++++||||+..
T Consensus       221 ~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         221 KESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             HHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence            889999999999999999998 588999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.95  E-value=3.3e-27  Score=175.18  Aligned_cols=175  Identities=49%  Similarity=0.874  Sum_probs=129.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.++.............++..|+|||.+.+
T Consensus        98 ~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  177 (291)
T cd07844          98 GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLG  177 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhc
Confidence            3589999999999999999999         555      6678999999998754332222233356788999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCC-CcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT-FPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  152 (197)
                      ...++.++|+||+|+++|+|++|..||.... ..+....+....+.+....++........... ...............
T Consensus       178 ~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (291)
T cd07844         178 STEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPR  257 (291)
T ss_pred             CcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcC
Confidence            5557889999999999999999999997665 55666667777777666666554433222211 111111222222234


Q ss_pred             CC--HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         153 LD--QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       153 ~~--~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .+  ..+.+++.+||+.+|++|||+.++++||||
T Consensus       258 ~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         258 LDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             CCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            44  789999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.95  E-value=1.5e-27  Score=179.65  Aligned_cols=148  Identities=18%  Similarity=0.269  Sum_probs=119.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |||      +++.+||+|||+++.............||+.|+|||++.+
T Consensus        96 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  175 (323)
T cd05616          96 GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAY  175 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcC
Confidence            4689999999999999999999         666      5577899999998754433333334578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|+.||.+.+.......+......                             ....++
T Consensus       176 ~~-~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~p~~~s  225 (323)
T cd05616         176 QP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-----------------------------YPKSMS  225 (323)
T ss_pred             CC-CCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----------------------------CCCcCC
Confidence            44 889999999999999999999999988877666665432110                             013367


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      .++.+++.+||+.||++|++     .+++++||||+..
T Consensus       226 ~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         226 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             HHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence            89999999999999999998     4899999999865

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=1.2e-27  Score=181.04  Aligned_cols=181  Identities=35%  Similarity=0.593  Sum_probs=132.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|+++||+||         |+|      .++.++|+|||++..............++..|+|||.+.+
T Consensus       103 ~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  182 (337)
T cd07858         103 QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLN  182 (337)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhc
Confidence            4689999999999999999999         555      4567899999999866443333334567889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC--CCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL--PDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...++.++|+||+||+++++++|+.||.+.+.......+....+.+..+.+......  ..+....+...........+.
T Consensus       183 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (337)
T cd07858         183 CSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPH  262 (337)
T ss_pred             CCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHccc
Confidence            444889999999999999999999999888777777777766666554333211110  000000111111111222356


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ++..+.+++++||+.+|++|||++++++||||....+.
T Consensus       263 ~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~  300 (337)
T cd07858         263 ANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP  300 (337)
T ss_pred             CCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence            88999999999999999999999999999999876444

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.95  E-value=1.8e-27  Score=179.28  Aligned_cols=148  Identities=21%  Similarity=0.314  Sum_probs=118.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.||+.||+||         |||      +++.++|+|||++..............||..|+|||++.+
T Consensus        96 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  175 (324)
T cd05587          96 GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAY  175 (324)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcC
Confidence            4589999999999999999999         677      5567899999998754322222334568999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|+.||.+.+..+....+......                             ....++
T Consensus       176 ~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~-----------------------------~~~~~~  225 (324)
T cd05587         176 QP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS-----------------------------YPKSLS  225 (324)
T ss_pred             CC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-----------------------------CCCCCC
Confidence            44 889999999999999999999999988777666665431100                             013367


Q ss_pred             HhHHHHHHhhcccCCCCCCCH-----HHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA-----ENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~-----~ell~hp~~~~~  187 (197)
                      ..+.+++.+||..||++|+++     +++++||||+..
T Consensus       226 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         226 KEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            889999999999999999986     799999999864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.95  E-value=1.8e-27  Score=178.76  Aligned_cols=148  Identities=21%  Similarity=0.322  Sum_probs=118.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |||      +++.++|+|||+++............+++..|+|||.+.+
T Consensus        91 ~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  170 (318)
T cd05570          91 GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSY  170 (318)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcC
Confidence            3699999999999999999999         666      5678899999998754332222334468999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|..||...+.......+.....                             .....++
T Consensus       171 ~~-~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~-----------------------------~~~~~~~  220 (318)
T cd05570         171 QP-YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV-----------------------------RYPRWLS  220 (318)
T ss_pred             CC-CCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-----------------------------CCCCcCC
Confidence            44 88999999999999999999999988776665554432100                             0012367


Q ss_pred             HhHHHHHHhhcccCCCCCCCH-----HHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA-----ENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~-----~ell~hp~~~~~  187 (197)
                      ..+.++|.+||+.||++||++     .++++||||+..
T Consensus       221 ~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         221 KEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             HHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            889999999999999999999     999999999875

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.95  E-value=1.9e-27  Score=175.71  Aligned_cols=152  Identities=19%  Similarity=0.246  Sum_probs=116.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.+..............+++.|+|||.+.+
T Consensus        92 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  171 (280)
T cd05608          92 PGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQG  171 (280)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcC
Confidence            4589999999999999999999         666      5577899999999766543333334568899999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|+.||...........+.........                         .....++
T Consensus       172 ~~-~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~  225 (280)
T cd05608         172 EE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV-------------------------TYPDKFS  225 (280)
T ss_pred             CC-CCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC-------------------------CCcccCC
Confidence            54 889999999999999999999999765432222221111100000                         0113467


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ..+.+++.+||+.||++|+     +++++++||||++.
T Consensus       226 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         226 PASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             HHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence            8999999999999999999     88999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.7e-27  Score=175.82  Aligned_cols=145  Identities=23%  Similarity=0.337  Sum_probs=117.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||+++......   ....|++.|+|||++.+
T Consensus        96 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~  172 (291)
T cd05612          96 GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT---WTLCGTPEYLAPEVIQS  172 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc---ccccCChhhcCHHHHcC
Confidence            4689999999999999999999         666      55789999999997654322   23468999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++||||+||++|+|++|..||.+.........+......                             .....+
T Consensus       173 ~~-~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-----------------------------~~~~~~  222 (291)
T cd05612         173 KG-HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE-----------------------------FPRHLD  222 (291)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC-----------------------------CCccCC
Confidence            44 789999999999999999999999988776666655431100                             012356


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+++++.+||..||.+|++     ++++++||||+..
T Consensus       223 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         223 LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV  260 (291)
T ss_pred             HHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence            78999999999999999995     9999999999854

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.7e-27  Score=179.70  Aligned_cols=180  Identities=40%  Similarity=0.663  Sum_probs=137.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc---cccccceeccceeCchhh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV---RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~---~~~~~~~~~~~y~aPE~~   72 (197)
                      .+++..+..++.|+++||+||         |+|      +++.++|+|||.+.......   .......++..|+|||.+
T Consensus        99 ~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  178 (330)
T cd07834          99 PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELL  178 (330)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceee
Confidence            689999999999999999999         555      56789999999998765432   123344678899999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCC--CCCCCCCCCcccchhhhhhcc
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .+....+.++|+||+|++++++++|..||.+.+..+....+....+.+..+.+....  ....+................
T Consensus       179 ~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (330)
T cd07834         179 LSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLF  258 (330)
T ss_pred             ecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhc
Confidence            876458899999999999999999999999998888888888877776655443211  111111111111222233334


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      +..+..+.+++.+||+.+|.+||++++++.||||++..+.
T Consensus       259 ~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         259 PGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence            5578999999999999999999999999999999876554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5.5e-28  Score=182.44  Aligned_cols=150  Identities=25%  Similarity=0.328  Sum_probs=119.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||++||+||         |||      +++.++|+|||++..............||..|+|||.+.+
T Consensus        91 ~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (330)
T cd05586          91 GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLD  170 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcC
Confidence            4699999999999999999999         677      5577899999998764333333334578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...++.++|+||+||++|+|++|..||...+.......+.......                  +          ...++
T Consensus       171 ~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~------------------~----------~~~~~  222 (330)
T cd05586         171 EKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF------------------P----------KNVLS  222 (330)
T ss_pred             CCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCC------------------C----------CccCC
Confidence            5557899999999999999999999998877666555543211000                  0          02357


Q ss_pred             HhHHHHHHhhcccCCCCCC----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~----s~~ell~hp~~~~~  187 (197)
                      ..+.+++.+||+.||.+||    +++++++||||++.
T Consensus       223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             HHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence            8899999999999999998    79999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=2.4e-27  Score=179.81  Aligned_cols=181  Identities=33%  Similarity=0.533  Sum_probs=131.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.++.....   .....++..|+|||.+.+
T Consensus       112 ~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~  188 (342)
T cd07879         112 HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILN  188 (342)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC---CCCceeeecccChhhhcC
Confidence            4689999999999999999999         555      5678999999998765322   223467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC--CCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL--PDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...++.++|+||+||+++++++|+.||.+.+.......+....+.+...........  ..+....+...........+.
T Consensus       189 ~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (342)
T cd07879         189 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPK  268 (342)
T ss_pred             ccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcC
Confidence            444788999999999999999999999988777777666665554433222111110  000011111111122223345


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      .+..+.+++.+||+.||++||++++++.||||++..+.++.
T Consensus       269 ~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~  309 (342)
T cd07879         269 ASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEE  309 (342)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccccccc
Confidence            77889999999999999999999999999999987765543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.95  E-value=2.6e-27  Score=178.33  Aligned_cols=148  Identities=24%  Similarity=0.320  Sum_probs=119.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.||+||         |||      +++.+||+|||+++.............|++.|+|||.+.+
T Consensus        95 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  174 (323)
T cd05584          95 GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMR  174 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccC
Confidence            4588999999999999999999         666      5677899999998754333223334568999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++||||+||++|+|++|..||...+.......+.....                             .....++
T Consensus       175 ~~-~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~  224 (323)
T cd05584         175 SG-HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL-----------------------------NLPPYLT  224 (323)
T ss_pred             CC-CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-----------------------------CCCCCCC
Confidence            44 78899999999999999999999998877766665543110                             0113367


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ..+.++|.+||+.||++||     +++++++||||+..
T Consensus       225 ~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         225 PEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             HHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            8899999999999999999     89999999999865

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG4279|consensus

Probab=99.95  E-value=2.5e-28  Score=190.45  Aligned_cols=159  Identities=22%  Similarity=0.411  Sum_probs=126.4

Q ss_pred             hhhHHHhhhcC--CHHHHHHHHHHHHhhhccc---------ccCCC-------CcEEEeecCCccccCCCccccccceec
Q psy6390           2 CNLIQLEWEQV--GTYQVKITTRLFLQATSFC---------IKPKS-------NIVKVADFGLARAFGVPVRIYTHEVVT   63 (197)
Q Consensus         2 ~~~~~~~~~~l--~~~~~~~~~~qi~~~l~~l---------lkp~~-------~~vkl~Dfg~s~~~~~~~~~~~~~~~~   63 (197)
                      ..|+|..|.++  .|+.+..|.+||++||.||         ||.+|       +.+||+|||.++.+-.-.-...+..||
T Consensus       660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGT  739 (1226)
T KOG4279|consen  660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGT  739 (1226)
T ss_pred             HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccc
Confidence            46889999999  9999999999999999999         66655       667999999998764322234456899


Q ss_pred             cceeCchhhcC-CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH-HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCccc
Q psy6390          64 LWYRAPEVLLG-SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI-DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW  141 (197)
Q Consensus        64 ~~y~aPE~~~~-~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (197)
                      ..|||||++.. .++|+.++||||+||+..||.+|++||...... ....++.-...+|                     
T Consensus       740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP---------------------  798 (1226)
T KOG4279|consen  740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHP---------------------  798 (1226)
T ss_pred             hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCC---------------------
Confidence            99999999965 445999999999999999999999999765433 2333332211111                     


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                            ..+..+|.+++.+|.+|+.++|..||+|.++|++||++..
T Consensus       799 ------~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  799 ------PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             ------CCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence                  1224478899999999999999999999999999999865

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.95  E-value=2.1e-27  Score=179.86  Aligned_cols=145  Identities=23%  Similarity=0.311  Sum_probs=118.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.||+||         |||      +++.++|+|||+++.....   .....||+.|+|||++.+
T Consensus       126 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~  202 (340)
T PTZ00426        126 KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR---TYTLCGTPEYIAPEILLN  202 (340)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC---cceecCChhhcCHHHHhC
Confidence            4699999999999999999999         666      5678999999999765432   223468999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...+.......+......                             .....+
T Consensus       203 ~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~p~~~~  252 (340)
T PTZ00426        203 VG-HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY-----------------------------FPKFLD  252 (340)
T ss_pred             CC-CCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC-----------------------------CCCCCC
Confidence            44 789999999999999999999999988776666665431110                             013366


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ..+.+++++||+.||++|+     +++++++||||++.
T Consensus       253 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        253 NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            7899999999999999996     89999999999875

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.95  E-value=2.7e-27  Score=177.65  Aligned_cols=148  Identities=22%  Similarity=0.340  Sum_probs=118.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |||      +++.+||+|||+++.............||+.|+|||.+.+
T Consensus        91 ~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05592          91 GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKG  170 (316)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcC
Confidence            4699999999999999999999         666      5577899999999765433333344578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.+.......+......                             ....++
T Consensus       171 ~~-~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~~~~~~  220 (316)
T cd05592         171 QK-YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPH-----------------------------FPRWIS  220 (316)
T ss_pred             CC-CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-----------------------------CCCCCC
Confidence            54 889999999999999999999999988776665554321000                             012367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHH-HHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAE-NALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~-ell~hp~~~~~  187 (197)
                      .++.+++.+||+.||++|+++. ++++||||+..
T Consensus       221 ~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         221 KEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             HHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence            7899999999999999999864 78899999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.95  E-value=3.1e-27  Score=177.38  Aligned_cols=148  Identities=23%  Similarity=0.348  Sum_probs=117.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.++..++.|++.||+||         |||      +++.++|+|||+++.............||..|+|||++.+
T Consensus        91 ~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05619          91 HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLG  170 (316)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcC
Confidence            4689999999999999999999         666      5577899999998754322222334568999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|..||...+.......+......                             .....+
T Consensus       171 ~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~-----------------------------~~~~~~  220 (316)
T cd05619         171 QK-YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPC-----------------------------YPRWLT  220 (316)
T ss_pred             CC-CCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----------------------------CCccCC
Confidence            44 889999999999999999999999887766555554321000                             002256


Q ss_pred             HhHHHHHHhhcccCCCCCCCHH-HHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAE-NALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~-ell~hp~~~~~  187 (197)
                      ..+.+++.+||+.||++|+++. ++++||||+..
T Consensus       221 ~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         221 REAKDILVKLFVREPERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             HHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence            7899999999999999999996 89999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0589|consensus

Probab=99.95  E-value=1.5e-27  Score=179.70  Aligned_cols=150  Identities=25%  Similarity=0.352  Sum_probs=131.0

Q ss_pred             HhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390           7 LEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         7 ~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      .+...|+|..+..++.|++.|++||         ||.      ++..|+|+|||+|+.+..+.....+.+||+.||+||+
T Consensus        98 ~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEi  177 (426)
T KOG0589|consen   98 QKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEI  177 (426)
T ss_pred             HhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHH
Confidence            3445699999999999999999999         444      5567799999999999887766778899999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.+ |+.++||||+||++|+|++-+.+|.+.+......++.+....|.+                            .
T Consensus       178 l~d~p-Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp----------------------------~  228 (426)
T KOG0589|consen  178 LSDIP-YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP----------------------------S  228 (426)
T ss_pred             hCCCC-CCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC----------------------------c
Confidence            98855 999999999999999999999999999999999888876544322                            4


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      ..+.+++.+++.||..+|+.||++.++|.+|.++
T Consensus       229 ~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  229 MYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             cccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence            4678999999999999999999999999998765

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.95  E-value=2.2e-27  Score=178.63  Aligned_cols=148  Identities=22%  Similarity=0.308  Sum_probs=118.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      +++.+||+|||+++.............|++.|+|||.+.+
T Consensus        90 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  169 (323)
T cd05595          90 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED  169 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccC
Confidence            4589999999999999999999         777      5577899999998754333222334568999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|..||...+.......+.....                             .....++
T Consensus       170 ~~-~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-----------------------------~~p~~~~  219 (323)
T cd05595         170 ND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-----------------------------RFPRTLS  219 (323)
T ss_pred             CC-CCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----------------------------CCCCCCC
Confidence            44 78999999999999999999999988776655555432100                             0113467


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ..+.++|.+||+.||++|+     ++.++++||||.+.
T Consensus       220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         220 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             HHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence            8999999999999999998     89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.95  E-value=2.4e-27  Score=179.39  Aligned_cols=181  Identities=34%  Similarity=0.611  Sum_probs=131.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE~   71 (197)
                      +.+++..++.++.|+++||+||         |+|      +++.++|+|||++........   ......++..|+|||.
T Consensus       101 ~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (336)
T cd07849         101 QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEI  180 (336)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHH
Confidence            4699999999999999999999         666      456799999999876543211   1123467889999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhhhc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  149 (197)
                      +.+...++.++|+||+||+++++++|+.||.+.+.......+...++.+..+.+.......  .+....+..........
T Consensus       181 ~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (336)
T cd07849         181 MLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKL  260 (336)
T ss_pred             hhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHH
Confidence            8765557899999999999999999999998888777777777766665544332211100  00000111111111222


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      .+..+..+.+++.+||+.+|++|||+.++++||||++..+.
T Consensus       261 ~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~  301 (336)
T cd07849         261 FPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP  301 (336)
T ss_pred             hcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence            34568889999999999999999999999999999887654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.95  E-value=4.9e-27  Score=173.42  Aligned_cols=175  Identities=53%  Similarity=0.938  Sum_probs=133.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        93 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~  172 (283)
T cd05118          93 RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLG  172 (283)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhc
Confidence            4789999999999999999999         555      5678999999999776554322333467888999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC-CCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-PDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      ....+.++|+||+|++++++++|+.+|...+..+....+...++.+....+...... ......++...........+..
T Consensus       173 ~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (283)
T cd05118         173 DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNA  252 (283)
T ss_pred             CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhh
Confidence            545889999999999999999999999998888888777777666655554443331 1111111211122223333567


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      +..+.++|.+||+.||.+||++++++.||||
T Consensus       253 ~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         253 SPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             CHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            8899999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.95  E-value=3.2e-27  Score=178.18  Aligned_cols=145  Identities=23%  Similarity=0.297  Sum_probs=117.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.||+||         |||      +++.+||+|||.++......   ....|++.|+|||++.+
T Consensus       113 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~  189 (329)
T PTZ00263        113 GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT---FTLCGTPEYLAPEVIQS  189 (329)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc---ceecCChhhcCHHHHcC
Confidence            4689999999999999999999         666      56789999999998664332   23468999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.........+......                             ....++
T Consensus       190 ~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-----------------------------~p~~~~  239 (329)
T PTZ00263        190 KG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLK-----------------------------FPNWFD  239 (329)
T ss_pred             CC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcC-----------------------------CCCCCC
Confidence            55 789999999999999999999999887766555554321000                             012256


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+.+|+.+||+.||++|++     +++++.||||++.
T Consensus       240 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        240 GRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence            78999999999999999997     7999999999864

>KOG0197|consensus

Probab=99.95  E-value=2.8e-27  Score=179.17  Aligned_cols=147  Identities=22%  Similarity=0.263  Sum_probs=121.5

Q ss_pred             hHHH-hhhcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCccc-cccceeccce
Q psy6390           4 LIQL-EWEQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRI-YTHEVVTLWY   66 (197)
Q Consensus         4 ~~~~-~~~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y   66 (197)
                      +++. +...++..++..++.||++||+||               |..++..+||+|||+|+...++... ....--+..|
T Consensus       291 yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkW  370 (468)
T KOG0197|consen  291 YLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKW  370 (468)
T ss_pred             HhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCcee
Confidence            4444 446799999999999999999999               6668889999999999965543322 2222337899


Q ss_pred             eCchhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhh
Q psy6390          67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC  145 (197)
Q Consensus        67 ~aPE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (197)
                      .|||.+..+. ++.++||||||+++||+++ |+.||.+.+..+.+..+.+.-.-+.                        
T Consensus       371 tAPEa~~~~~-FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~------------------------  425 (468)
T KOG0197|consen  371 TAPEALNYGK-FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPR------------------------  425 (468)
T ss_pred             cCHHHHhhCC-cccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCC------------------------
Confidence            9999998867 9999999999999999999 9999999999999999876544332                        


Q ss_pred             hhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       146 ~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                          +..++..+.+++..||..+|++|||++.+.
T Consensus       426 ----P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  426 ----PEGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             ----CCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence                255889999999999999999999999764

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.95  E-value=2.7e-27  Score=178.18  Aligned_cols=149  Identities=22%  Similarity=0.275  Sum_probs=119.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||++||+||         |||      +++.+||+|||+++.............||+.|+|||.+.+
T Consensus        91 ~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (323)
T cd05575          91 RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRK  170 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcC
Confidence            4689999999999999999999         666      5678899999998754333333334578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...+..+....+.....                             ...+.++
T Consensus       171 ~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----------------------------~~~~~~~  220 (323)
T cd05575         171 QP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL-----------------------------RLKPNIS  220 (323)
T ss_pred             CC-CCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-----------------------------CCCCCCC
Confidence            44 88999999999999999999999988776665555432100                             0113467


Q ss_pred             HhHHHHHHhhcccCCCCCCCH----HHHhcCcccCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA----ENALKHKYFADKT  188 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~----~ell~hp~~~~~~  188 (197)
                      ..+.+++.+||+.||++||++    .+++.||||....
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~  258 (323)
T cd05575         221 VSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSIN  258 (323)
T ss_pred             HHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCC
Confidence            899999999999999999987    6999999998653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.95  E-value=1.1e-27  Score=180.38  Aligned_cols=149  Identities=23%  Similarity=0.314  Sum_probs=118.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||+.||+||          |||      +++.+||+|||+++.............||+.|+|||++.
T Consensus        90 ~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~  169 (325)
T cd05594          90 RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE  169 (325)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHc
Confidence            4689999999999999999999          777      446789999999875433322233456899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++|+||+||++|+|++|..||.+.+.......+.....                             ......
T Consensus       170 ~~~-~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~-----------------------------~~p~~~  219 (325)
T cd05594         170 DND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-----------------------------RFPRTL  219 (325)
T ss_pred             cCC-CCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC-----------------------------CCCCCC
Confidence            644 88999999999999999999999988776555544422100                             011336


Q ss_pred             CHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADKT  188 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~~  188 (197)
                      +.++.+++.+||+.||++|+     ++.++++||||++..
T Consensus       220 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~  259 (325)
T cd05594         220 SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV  259 (325)
T ss_pred             CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence            78899999999999999997     899999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0610|consensus

Probab=99.95  E-value=4.2e-27  Score=173.46  Aligned_cols=151  Identities=23%  Similarity=0.325  Sum_probs=123.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCC---------------------
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGV---------------------   52 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~---------------------   52 (197)
                      .+.|++..++.|+.+++.||+||         |||      ++++|.|+||.++.....                     
T Consensus       173 ~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~  252 (459)
T KOG0610|consen  173 GKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRS  252 (459)
T ss_pred             CCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCccccc
Confidence            35799999999999999999999         888      568889999998754310                     


Q ss_pred             ------------C-c----------------------cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhC
Q psy6390          53 ------------P-V----------------------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR   97 (197)
Q Consensus        53 ------------~-~----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~   97 (197)
                                  . .                      ......+||-.|+|||++.+.+ .+.++|.|++|+.+|||+.|
T Consensus       253 ~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G-HgsAVDWWtfGIflYEmLyG  331 (459)
T KOG0610|consen  253 RQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG-HGSAVDWWTFGIFLYEMLYG  331 (459)
T ss_pred             ccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC-CCchhhHHHHHHHHHHHHhC
Confidence                        0 0                      0011347899999999999866 78999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCC---
Q psy6390          98 KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN---  174 (197)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s---  174 (197)
                      .-||.+.+....+..+.......+.                           .+.++..++|||+++|.+||++|+.   
T Consensus       332 ~TPFKG~~~~~Tl~NIv~~~l~Fp~---------------------------~~~vs~~akDLIr~LLvKdP~kRlg~~r  384 (459)
T KOG0610|consen  332 TTPFKGSNNKETLRNIVGQPLKFPE---------------------------EPEVSSAAKDLIRKLLVKDPSKRLGSKR  384 (459)
T ss_pred             CCCcCCCCchhhHHHHhcCCCcCCC---------------------------CCcchhHHHHHHHHHhccChhhhhcccc
Confidence            9999999999999887642111110                           1347789999999999999999998   


Q ss_pred             -HHHHhcCcccCCC
Q psy6390         175 -AENALKHKYFADK  187 (197)
Q Consensus       175 -~~ell~hp~~~~~  187 (197)
                       |+||-+||||+++
T Consensus       385 GA~eIK~HpFF~gV  398 (459)
T KOG0610|consen  385 GAAEIKRHPFFEGV  398 (459)
T ss_pred             chHHhhcCccccCC
Confidence             9999999999976

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.95  E-value=1.3e-26  Score=175.32  Aligned_cols=180  Identities=47%  Similarity=0.781  Sum_probs=135.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC--------------ccccccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP--------------VRIYTHE   60 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~--------------~~~~~~~   60 (197)
                      ..+++..+..++.|++.||+||         |+|      .++.++|+|||.+......              .......
T Consensus       114 ~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (335)
T PTZ00024        114 IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSK  193 (335)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccccccccccccccccccc
Confidence            3589999999999999999999         555      5577899999998765411              1112233


Q ss_pred             eeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcc
Q psy6390          61 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE  140 (197)
Q Consensus        61 ~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (197)
                      .++..|+|||.+.+...++.++|+||+||+++++++|..||.+.+..+.+..+....+.+....|+.....+.+......
T Consensus       194 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (335)
T PTZ00024        194 VVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPR  273 (335)
T ss_pred             ccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcC
Confidence            45788999999976555789999999999999999999999999888888888888877776656544433322211111


Q ss_pred             cchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                       ............+..+.+++.+||+.+|++||++++++.||||++....
T Consensus       274 -~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~  322 (335)
T PTZ00024        274 -KPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLP  322 (335)
T ss_pred             -CcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCC
Confidence             1111222335578899999999999999999999999999999876544

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.95  E-value=3.4e-27  Score=179.04  Aligned_cols=179  Identities=35%  Similarity=0.596  Sum_probs=131.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|+++||+||         |+|      +++.++|+|||.+......   .....++..|+|||.+.+
T Consensus       113 ~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~  189 (343)
T cd07851         113 QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc---ccCCcccccccCHHHHhC
Confidence            3689999999999999999999         555      5677999999999765432   223466888999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC--CCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL--PDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ....+.++|+||+||+++++++|+.||.+......+..+....+.+++..+......  ..+....+.............
T Consensus       190 ~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (343)
T cd07851         190 WMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSG  269 (343)
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhcc
Confidence            445788999999999999999999999988887777777776655443322221110  000000111111111222345


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      .+..+.+++.+||+.||++|||+.++++||||++..+..
T Consensus       270 ~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~  308 (343)
T cd07851         270 ANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPE  308 (343)
T ss_pred             CCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCc
Confidence            688999999999999999999999999999998776553

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.95  E-value=2.9e-27  Score=178.68  Aligned_cols=149  Identities=25%  Similarity=0.338  Sum_probs=114.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||+.||+||         |||      +++.++|+|||+++...... .......||..|+|||.+.
T Consensus       100 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  179 (332)
T cd05614         100 DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIR  179 (332)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhc
Confidence            4699999999999999999999         666      55788999999997653322 1222346899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH---HHH-HHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI---DQL-FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      +...++.++||||+||++|+|++|..||......   ... ..+...    .                         ...
T Consensus       180 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~----~-------------------------~~~  230 (332)
T cd05614         180 GKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC----D-------------------------PPF  230 (332)
T ss_pred             CCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC----C-------------------------CCC
Confidence            6555788999999999999999999999653221   111 222110    0                         001


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ...++..+.+++.+||+.||++||     +++++++||||++.
T Consensus       231 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         231 PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            134678899999999999999999     88899999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.95  E-value=3.5e-27  Score=179.58  Aligned_cols=181  Identities=33%  Similarity=0.524  Sum_probs=128.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |||      +++.++|+|||.++....... .....++..|+|||.+.+
T Consensus       113 ~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~  191 (353)
T cd07850         113 MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG  191 (353)
T ss_pred             hcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC-CCCCcccccccCHHHHhC
Confidence            3489999999999999999999         666      567899999999986644322 223467889999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCC--------CCC-----CCCCCccc
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--------LPD-----YKTTFPEW  141 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-----~~~~~~~~  141 (197)
                      .. ++.++|+||+||++++|++|+.||...+.......+...++.+..........        .+.     +....+..
T Consensus       192 ~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (353)
T cd07850         192 MG-YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDV  270 (353)
T ss_pred             CC-CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCccc
Confidence            44 88999999999999999999999998888777777777666654321111100        000     00000000


Q ss_pred             c-hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         142 S-NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       142 ~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                      . ...........+..++++|.+||+.||++|||+.|+|.||||+.+-+..+
T Consensus       271 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~~~  322 (353)
T cd07850         271 LFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSE  322 (353)
T ss_pred             ccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCCcc
Confidence            0 00000001234667899999999999999999999999999987655433

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.95  E-value=1.9e-26  Score=172.45  Aligned_cols=174  Identities=41%  Similarity=0.744  Sum_probs=125.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc----ccccceeccceeCchh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVVTLWYRAPEV   71 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~~~~y~aPE~   71 (197)
                      .+++.+++.++.|+++||+||         |+|      +++.++|+|||.+........    ......++..|+|||.
T Consensus       115 ~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  194 (310)
T cd07865         115 KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPEL  194 (310)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHH
Confidence            689999999999999999999         555      567889999999976533221    1123456788999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC-CCcccch-hhhhh-
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEWSN-FCLDK-  148 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-  148 (197)
                      +.+...++.++|+||+|++++++++|+.||.+.+.......+....+..+...++.......+.. ..+.... ..... 
T Consensus       195 ~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  274 (310)
T cd07865         195 LLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERL  274 (310)
T ss_pred             hcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhc
Confidence            87655578899999999999999999999998887777777777666655554444322211110 0000000 00000 


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .....+..+.++|.+||..||++|||++++++||||
T Consensus       275 ~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         275 KPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             ccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            111246778999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.94  E-value=1.7e-26  Score=174.39  Aligned_cols=175  Identities=21%  Similarity=0.288  Sum_probs=117.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.||+||          |||      +++.++|+|||++.......  .....++..|+|||++.
T Consensus        98 ~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~g~~~y~aPE~~~  175 (331)
T cd06649          98 KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ  175 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc--cccCCCCcCcCCHhHhc
Confidence            4589999999999999999998          666      45678999999987654322  22346899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCC---------CCCCc-----
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY---------KTTFP-----  139 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-----  139 (197)
                      +.. ++.++|+||+||++|++++|+.||...+..+....+.....................         ....+     
T Consensus       176 ~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (331)
T cd06649         176 GTH-YSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIF  254 (331)
T ss_pred             CCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHH
Confidence            654 889999999999999999999999876654433222111100000000000000000         00000     


Q ss_pred             ccchhhhh-----hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         140 EWSNFCLD-----KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       140 ~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ........     ......+.++.+|+.+||..||++|||++++++||||+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         255 ELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             HHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence            00000000     0012367889999999999999999999999999999865

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.94  E-value=7e-27  Score=176.38  Aligned_cols=149  Identities=21%  Similarity=0.306  Sum_probs=113.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..++.++.|++.||+||         |||      +++.++|+|||+++.............||..|+|||++.+
T Consensus        91 ~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (329)
T cd05588          91 RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRG  170 (329)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcC
Confidence            5699999999999999999999         666      5577899999998754332233334578999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh--------HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE--------IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      .. ++.++|+||+||++|++++|+.||.....        .+........  .                          .
T Consensus       171 ~~-~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~--------------------------~  221 (329)
T cd05588         171 ED-YGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE--K--------------------------Q  221 (329)
T ss_pred             CC-CCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc--C--------------------------C
Confidence            44 88999999999999999999999963211        1111111100  0                          0


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCC------HHHHhcCcccCCC
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRIN------AENALKHKYFADK  187 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s------~~ell~hp~~~~~  187 (197)
                      ......++..+.+++++||+.||++|++      ++++++||||...
T Consensus       222 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~  268 (329)
T cd05588         222 IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI  268 (329)
T ss_pred             CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            0111346788999999999999999997      7899999999754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.94  E-value=1.1e-26  Score=174.80  Aligned_cols=148  Identities=21%  Similarity=0.315  Sum_probs=119.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.++..++.|++.||+||         |||      +++.++|+|||+++.............||+.|+|||++.+
T Consensus        96 ~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  175 (323)
T cd05615          96 GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAY  175 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcC
Confidence            4699999999999999999999         666      5678999999998765433323334568999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.........+......                             ....++
T Consensus       176 ~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~-----------------------------~p~~~~  225 (323)
T cd05615         176 QP-YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS-----------------------------YPKSLS  225 (323)
T ss_pred             CC-CCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----------------------------CCccCC
Confidence            44 889999999999999999999999988776666665431110                             013367


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+.+++.+||+.||.+|++     .+++++||||+..
T Consensus       226 ~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         226 KEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             HHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence            78999999999999999997     5789999999865

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=8.9e-27  Score=176.08  Aligned_cols=153  Identities=25%  Similarity=0.365  Sum_probs=120.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.||+||         |||      +++.+||+|||++.....   ......||+.|+|||.+.+
T Consensus        96 ~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~  172 (333)
T cd05600          96 GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---YANSVVGSPDYMAPEVLRG  172 (333)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---ccCCcccCccccChhHhcC
Confidence            4689999999999999999999         666      557799999999976543   2234578999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...+..+....+........         .+...            .....++
T Consensus       173 ~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~---------~~~~~------------~~~~~~s  230 (333)
T cd05600         173 KG-YDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ---------RPVYD------------DPRFNLS  230 (333)
T ss_pred             CC-CCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc---------CCCCC------------ccccccC
Confidence            54 88999999999999999999999998877666655543211100         00000            0003467


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .++.+++.+||..+|.+|++++++++||||++.
T Consensus       231 ~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         231 DEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             HHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence            899999999999999999999999999999875

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0596|consensus

Probab=99.94  E-value=5.6e-27  Score=178.33  Aligned_cols=158  Identities=23%  Similarity=0.355  Sum_probs=114.2

Q ss_pred             hHHHhhhcCCHHHHHHHHHHHHhhhccc---------ccCCC-----CcEEEeecCCccccCCCc--cccccceecccee
Q psy6390           4 LIQLEWEQVGTYQVKITTRLFLQATSFC---------IKPKS-----NIVKVADFGLARAFGVPV--RIYTHEVVTLWYR   67 (197)
Q Consensus         4 ~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-----~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~   67 (197)
                      +++-.+...+...++.|..||+.|+.++         |||.|     |.+||+|||+|..+..+.  ......+||+-||
T Consensus       449 iL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYM  528 (677)
T KOG0596|consen  449 ILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYM  528 (677)
T ss_pred             HHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccccCccccc
Confidence            4444444555568999999999999999         99976     667999999998876532  3456789999999


Q ss_pred             CchhhcCCC----------CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy6390          68 APEVLLGSQ----------RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT  137 (197)
Q Consensus        68 aPE~~~~~~----------~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (197)
                      +||.+....          ..+.++||||+||++|+|+.|+.||..-..  ..+++.....+...-.++.          
T Consensus       529 sPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--~~aKl~aI~~P~~~Iefp~----------  596 (677)
T KOG0596|consen  529 SPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--QIAKLHAITDPNHEIEFPD----------  596 (677)
T ss_pred             CHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--HHHHHHhhcCCCccccccC----------
Confidence            999985311          156799999999999999999999975432  2222222111111000100          


Q ss_pred             CcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         138 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                         ..          -..+++++++.||..||.+||++.++|+|||++-
T Consensus       597 ---~~----------~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  597 ---IP----------ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             ---CC----------CchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence               00          0123899999999999999999999999999986

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=6.1e-27  Score=178.01  Aligned_cols=151  Identities=26%  Similarity=0.363  Sum_probs=119.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--------------------   54 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--------------------   54 (197)
                      ..+++..++.++.|++.||+||         |||      +++.++|+|||++.......                    
T Consensus        96 ~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (350)
T cd05573          96 DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLV  175 (350)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccc
Confidence            4699999999999999999999         666      55778999999997654432                    


Q ss_pred             ---------cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy6390          55 ---------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW  125 (197)
Q Consensus        55 ---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (197)
                               .......||+.|+|||++.+.. ++.++||||+||++|+|++|+.||...........+........    
T Consensus       176 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~----  250 (350)
T cd05573         176 RRRDHKQRRVRANSTVGTPDYIAPEVLRGTP-YGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLR----  250 (350)
T ss_pred             cccccccccccccccccCccccCHHHHcCCC-CCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCccc----
Confidence                     1223456899999999998754 88999999999999999999999998886666655543111100    


Q ss_pred             CCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCC-HHHHhcCcccCCC
Q psy6390         126 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN-AENALKHKYFADK  187 (197)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s-~~ell~hp~~~~~  187 (197)
                                  .         .....++..+.++|.+||. ||.+|++ ++++++||||++.
T Consensus       251 ------------~---------p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         251 ------------F---------PPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             ------------C---------CCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence                        0         0002267899999999998 9999999 9999999999865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=4.8e-27  Score=179.08  Aligned_cols=177  Identities=23%  Similarity=0.286  Sum_probs=114.6

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ....+++..+..++.||+.||+||         |||      .++.++|+|||.++...... ......||..|+|||++
T Consensus       150 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~~  228 (357)
T PHA03209        150 RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP-AFLGLAGTVETNAPEVL  228 (357)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCc-ccccccccccccCCeec
Confidence            345699999999999999999999         777      45678999999987533221 12234689999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCC-CCCCCCCh---------HHHHHHHHhhcCCCCCCCCCCCCC--C---CCCCC-
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSE---------IDQLFRIFRVLTTPTEDNWPGVSK--L---PDYKT-  136 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~-  136 (197)
                      .+.. ++.++|+||+||++|+++++. .+|.....         ...+..+....+..+.........  .   ..+.. 
T Consensus       229 ~~~~-~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (357)
T PHA03209        229 ARDK-YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASL  307 (357)
T ss_pred             CCCC-CCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhccc
Confidence            7755 889999999999999999844 44443221         122333333333222211100000  0   00000 


Q ss_pred             CCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         137 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ....+. .........++.++.+||.+||+.||++|||++|+++||||++.
T Consensus       308 ~~~~~~-~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~  357 (357)
T PHA03209        308 ERQPYT-RYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL  357 (357)
T ss_pred             CCCccc-ccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence            000000 00001113467788999999999999999999999999999864

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.94  E-value=6.7e-27  Score=176.67  Aligned_cols=181  Identities=36%  Similarity=0.609  Sum_probs=132.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc----ccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~~~~y~aPE   70 (197)
                      ..+++..++.++.|++.||+||         |||      +++.++|+|||.++.......    ......++..|+|||
T Consensus       100 ~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE  179 (332)
T cd07857         100 QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPE  179 (332)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcH
Confidence            5689999999999999999999         666      556789999999986543211    112346788999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCC--CCCCCcccchhhhhh
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD--YKTTFPEWSNFCLDK  148 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  148 (197)
                      .+.+...++.++|+||+||+++++++|..||...+....+..+....+.+..+..........  ...............
T Consensus       180 ~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (332)
T cd07857         180 IMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFES  259 (332)
T ss_pred             HHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHh
Confidence            987655578999999999999999999999998888888888887777655432221111000  000011111111222


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..+..+..+.+++.+||+.||++|||+++++.|||++.+.++
T Consensus       260 ~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~  301 (332)
T cd07857         260 IFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDP  301 (332)
T ss_pred             hCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCc
Confidence            335568899999999999999999999999999999877654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.94  E-value=3.9e-27  Score=162.64  Aligned_cols=153  Identities=16%  Similarity=0.183  Sum_probs=109.7

Q ss_pred             hhHHHhhhcCCHHHHHHHHHHHHhhhccc---ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           3 NLIQLEWEQVGTYQVKITTRLFLQATSFC---IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ++++...+.+++.+++.++.|+++||+||   -||      .++.+++  ||.++......     ..+++.|||||++.
T Consensus         5 ~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~~-----~~g~~~y~aPE~~~   77 (176)
T smart00750        5 DILEVRGRPLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKL--DGSVAFKTPEQ-----SRVDPYFMAPEVIQ   77 (176)
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceee--ccceEeecccc-----CCCcccccChHHhc
Confidence            34444455699999999999999999999   344      5566777  99987654322     26789999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHH-HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEID-QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++|++++|..||....... ....+........   .....                   ....
T Consensus        78 ~~~-~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~~~~  134 (176)
T smart00750       78 GQS-YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD---PRDRS-------------------NLES  134 (176)
T ss_pred             CCC-CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC---ccccc-------------------cHHH
Confidence            754 8899999999999999999999997654322 2222222111100   00000                   0011


Q ss_pred             CCH--hHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         153 LDQ--DGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       153 ~~~--~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      .+.  .+.+++.+||..||++||++.++++|+|+.
T Consensus       135 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      135 VSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            222  689999999999999999999999999975

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0580|consensus

Probab=99.94  E-value=5.8e-27  Score=161.65  Aligned_cols=148  Identities=23%  Similarity=0.356  Sum_probs=126.9

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++|.....|++|++.|+.|+         |||      .++.+|++|||.|......  ...+.+||..|.+||..
T Consensus       117 ~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~--kR~tlcgt~dyl~pEmv  194 (281)
T KOG0580|consen  117 RMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN--KRKTLCGTLDYLPPEMV  194 (281)
T ss_pred             ccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC--CceeeecccccCCHhhc
Confidence            346799999999999999999999         666      4577899999999776532  34567999999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+.. .+..+|+|++|+..|+++.|.+||+.....+..+++.+.-...+                             ..
T Consensus       195 ~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p-----------------------------~~  244 (281)
T KOG0580|consen  195 EGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP-----------------------------ST  244 (281)
T ss_pred             CCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC-----------------------------cc
Confidence            8755 88999999999999999999999999998888888876433322                             45


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ++..+.|+|.+|+..+|.+|.+..|++.|||+...
T Consensus       245 is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  245 ISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             cChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence            88999999999999999999999999999998765

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.94  E-value=1.2e-26  Score=175.01  Aligned_cols=149  Identities=20%  Similarity=0.315  Sum_probs=112.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..++.++.|+++||+||         |||      .++.++|+|||+++.............||..|+|||++.+
T Consensus        91 ~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (329)
T cd05618          91 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG  170 (329)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcC
Confidence            4699999999999999999999         677      5578899999998754333333334578999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCC--------hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDS--------EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      .. ++.++|+||+||++|+|++|..||....        ..........  ..                          .
T Consensus       171 ~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~--~~--------------------------~  221 (329)
T cd05618         171 ED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL--EK--------------------------Q  221 (329)
T ss_pred             CC-CCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh--cC--------------------------C
Confidence            44 7899999999999999999999995311        1111111110  00                          0


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCC------HHHHhcCcccCCC
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRIN------AENALKHKYFADK  187 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s------~~ell~hp~~~~~  187 (197)
                      ...+...+..+.+++.+||+.||++|++      ++++++||||+..
T Consensus       222 ~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         222 IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            0111346788999999999999999998      5799999999865

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.94  E-value=4.6e-27  Score=177.40  Aligned_cols=152  Identities=25%  Similarity=0.308  Sum_probs=118.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||         |||      .++.+||+|||++........ ......+|+.|+|||++.
T Consensus        97 ~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (330)
T cd05601          97 DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLT  176 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhc
Confidence            4699999999999999999999         777      457789999999986644322 222346899999999986


Q ss_pred             C-----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          74 G-----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        74 ~-----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      .     ...++.++||||+||++|+|++|..||...........+.......            .    +         .
T Consensus       177 ~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~------------~----~---------~  231 (330)
T cd05601         177 TMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFL------------K----F---------P  231 (330)
T ss_pred             cccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCcc------------C----C---------C
Confidence            3     2346789999999999999999999998887766666554321100            0    0         0


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ....++..+.+|+.+||. +|++||+++++++||||+..
T Consensus       232 ~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         232 EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence            113467899999999998 99999999999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.94  E-value=2e-26  Score=170.38  Aligned_cols=175  Identities=44%  Similarity=0.797  Sum_probs=131.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.+........ ......++..|+|||.+.
T Consensus        95 ~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  174 (287)
T cd07840          95 VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLL  174 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeE
Confidence            3699999999999999999999         555      678899999999986654321 123345678899999887


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCc-ccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP-EWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  152 (197)
                      +...++.++|+||+|++++++++|..||...+.......+....+.+....++............. .............
T Consensus       175 ~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (287)
T cd07840         175 GATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKH  254 (287)
T ss_pred             ccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcc
Confidence            655578999999999999999999999999888888888877777776666655443311111111 0111111222233


Q ss_pred             -CCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         153 -LDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       153 -~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                       .+..+.+++++||+.+|++||+++++++||||
T Consensus       255 ~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         255 LIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence             48899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.8e-26  Score=170.38  Aligned_cols=162  Identities=23%  Similarity=0.367  Sum_probs=123.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..++.++.|++.||.||         |+|      .++.++|+|||.+..............++..|++||.+.
T Consensus        97 ~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~  176 (280)
T cd06611          97 ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVA  176 (280)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHh
Confidence            34699999999999999999999         666      456789999999876544333333456788999999985


Q ss_pred             C----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 G----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ~----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .    ...++.++|+||+|+++|++++|..||...........+......       ..                   ..
T Consensus       177 ~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~-------------------~~  230 (280)
T cd06611         177 CETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPP-------TL-------------------DQ  230 (280)
T ss_pred             hcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCC-------Cc-------------------CC
Confidence            2    233678999999999999999999999877655544443221000       00                   00


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhhcc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAEY  196 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~~~  196 (197)
                      ....+..+.+++.+||+.+|.+||+++++++||||.+..+...+.+.
T Consensus       231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~~~  277 (280)
T cd06611         231 PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNKAIKDL  277 (280)
T ss_pred             cccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccchhHHHHHH
Confidence            13356789999999999999999999999999999988777666543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.94  E-value=8.9e-27  Score=176.15  Aligned_cols=182  Identities=31%  Similarity=0.575  Sum_probs=133.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc----ccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~~~~y~aPE   70 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.+........    ......++..|+|||
T Consensus       102 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE  181 (334)
T cd07855         102 QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPE  181 (334)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChH
Confidence            4589999999999999999999         565      667899999999876543221    122346788999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC--CCCCCCCcccchhhhhh
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL--PDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  148 (197)
                      .+.+...++.++|+||+||++|++++|+.||.+.+.......+....+.++..........  .......+.........
T Consensus       182 ~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (334)
T cd07855         182 LLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSK  261 (334)
T ss_pred             HhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHH
Confidence            9876455789999999999999999999999988877777777777776655433222110  00000111111111122


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ..+..+..+.++|.+||+.+|++||++++++.||||.+..+..
T Consensus       262 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~  304 (334)
T cd07855         262 IFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPD  304 (334)
T ss_pred             HcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCc
Confidence            2355789999999999999999999999999999998766554

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.94  E-value=4.9e-26  Score=169.71  Aligned_cols=175  Identities=39%  Similarity=0.692  Sum_probs=131.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.+||+|||.+....... .......++..|+|||.+.
T Consensus       111 ~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  190 (302)
T cd07864         111 VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLL  190 (302)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhc
Confidence            3689999999999999999999         555      56789999999987654322 1122335577899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCc-ccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP-EWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  152 (197)
                      +....+.++|+||+||+++++++|+.||...+....+..+.+..+.+....++.....+.+..... .............
T Consensus       191 ~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (302)
T cd07864         191 GEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSF  270 (302)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCC
Confidence            645478899999999999999999999998888888888887777766666655444333211110 0011112223345


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ++..+.+++.+||+.||.+||++++++.||||
T Consensus       271 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         271 IPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            78899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.94  E-value=6.6e-27  Score=176.25  Aligned_cols=148  Identities=21%  Similarity=0.243  Sum_probs=118.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.||+.||+||         |||      +++.++|+|||+++.............|+..|+|||.+.+
T Consensus        91 ~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (325)
T cd05604          91 RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRK  170 (325)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcC
Confidence            4699999999999999999999         666      5678899999998754333333344578999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...+.......+.....                             ...+..+
T Consensus       171 ~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~  220 (325)
T cd05604         171 QP-YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL-----------------------------VLRPGAS  220 (325)
T ss_pred             CC-CCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc-----------------------------cCCCCCC
Confidence            44 78999999999999999999999988776666555432100                             0113467


Q ss_pred             HhHHHHHHhhcccCCCCCCCH----HHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA----ENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~----~ell~hp~~~~~  187 (197)
                      ..+.+++++||..||++||++    .++++||||.+.
T Consensus       221 ~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         221 LTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             HHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence            889999999999999999977    589999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=4.3e-27  Score=176.74  Aligned_cols=148  Identities=24%  Similarity=0.297  Sum_probs=119.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |||      +++.++|+|||.++.............|+..|+|||.+.+
T Consensus        93 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  172 (318)
T cd05582          93 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR  172 (318)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcC
Confidence            3589999999999999999999         666      5677899999998765443223334578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...+.......+......                             ....++
T Consensus       173 ~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~-----------------------------~p~~~~  222 (318)
T cd05582         173 RG-HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLG-----------------------------MPQFLS  222 (318)
T ss_pred             CC-CCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCC-----------------------------CCCCCC
Confidence            44 788999999999999999999999988776666555431110                             113367


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+.+++++||+.||++||+     +++++.||||+..
T Consensus       223 ~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         223 PEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence            88999999999999999999     7779999999865

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0983|consensus

Probab=99.94  E-value=1.4e-26  Score=163.06  Aligned_cols=158  Identities=20%  Similarity=0.292  Sum_probs=123.9

Q ss_pred             hhHHHhhhcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccce
Q psy6390           3 NLIQLEWEQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWY   66 (197)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y   66 (197)
                      .|+..-..+++|.-+-++...+++||.||          +||      +.+++||||||+|..+-++.. .+-..|.+.|
T Consensus       179 kLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA-htrsAGC~~Y  257 (391)
T KOG0983|consen  179 KLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA-HTRSAGCAAY  257 (391)
T ss_pred             HHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc-cccccCCccc
Confidence            45555556799999999999999999999          777      557899999999987654432 2334778999


Q ss_pred             eCchhhcC--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccch
Q psy6390          67 RAPEVLLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN  143 (197)
Q Consensus        67 ~aPE~~~~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (197)
                      ||||.+.-  ...|+-++|+||+|++++|+.+|+.||.+.+ +.+.+..+...  .|+.     +.              
T Consensus       258 MaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~--ePP~-----L~--------------  316 (391)
T KOG0983|consen  258 MAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE--EPPL-----LP--------------  316 (391)
T ss_pred             cCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc--CCCC-----CC--------------
Confidence            99999853  3448899999999999999999999999864 45666666541  1110     00              


Q ss_pred             hhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       144 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                           .-...|+++.+++..||..|+.+||.-.++|+|||++.-
T Consensus       317 -----~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  317 -----GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY  355 (391)
T ss_pred             -----cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence                 003378899999999999999999999999999998754

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.94  E-value=3e-26  Score=175.40  Aligned_cols=153  Identities=24%  Similarity=0.306  Sum_probs=119.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.||+||         |||      +++.+||+|||.+........ ......||+.|+|||++.
T Consensus       137 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  216 (370)
T cd05596         137 YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLK  216 (370)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhc
Confidence            4589999999999999999999         666      567889999999976543221 223457899999999986


Q ss_pred             CCC---CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          74 GSQ---RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        74 ~~~---~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +..   .++.++|+||+||++|+|++|..||...+.......+........                ++         ..
T Consensus       217 ~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------~~---------~~  271 (370)
T cd05596         217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT----------------FP---------DD  271 (370)
T ss_pred             cCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC----------------CC---------Cc
Confidence            532   377899999999999999999999998877666666543111100                00         01


Q ss_pred             CCCCHhHHHHHHhhcccCCCC--CCCHHHHhcCcccCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFADK  187 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~--R~s~~ell~hp~~~~~  187 (197)
                      ..++..+.++|.+||..+|.+  |++++++++||||++.
T Consensus       272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            246889999999999999988  9999999999999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.94  E-value=2.5e-26  Score=174.93  Aligned_cols=153  Identities=20%  Similarity=0.253  Sum_probs=112.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      ..++..+..++.||+.||+||         |||      +++.+||+|||+++.............|+..|+|||.+...
T Consensus       164 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  243 (353)
T PLN00034        164 IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTD  243 (353)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccc
Confidence            367888899999999999999         666      55778999999998765433333445789999999987432


Q ss_pred             ----CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          76 ----QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        76 ----~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                          ...+.++||||+||++|++++|+.||......+....+........                         .....
T Consensus       244 ~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~  298 (353)
T PLN00034        244 LNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP-------------------------PEAPA  298 (353)
T ss_pred             cccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC-------------------------CCCCC
Confidence                2245689999999999999999999974432222222111100000                         01113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ..+..+.+||.+||..||++||+++|+++||||.+-.
T Consensus       299 ~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        299 TASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence            4678899999999999999999999999999998754

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.94  E-value=4.1e-26  Score=174.34  Aligned_cols=152  Identities=22%  Similarity=0.287  Sum_probs=115.4

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc------------------
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR------------------   55 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~------------------   55 (197)
                      ...+++..++.++.|++.||+||         |||      .++.++|+|||+++.......                  
T Consensus        95 ~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (363)
T cd05628          95 KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQ  174 (363)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccccccccc
Confidence            35699999999999999999999         777      557889999999875432100                  


Q ss_pred             -----------------ccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q psy6390          56 -----------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLT  118 (197)
Q Consensus        56 -----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  118 (197)
                                       .....+||+.|+|||++.+.. ++.++|+||+||++|+|++|..||.+.........+.....
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~  253 (363)
T cd05628         175 NMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKE  253 (363)
T ss_pred             ccccccccchhhhccccccccccCCccccCHHHHcCCC-CCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcC
Confidence                             012347899999999997754 88999999999999999999999998887776666643211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCC---CCCCHHHHhcCcccCCC
Q psy6390         119 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPA---TRINAENALKHKYFADK  187 (197)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~---~R~s~~ell~hp~~~~~  187 (197)
                      ...                ++         ....++.++++++.+|+. +|.   .||+++|+++||||++.
T Consensus       254 ~~~----------------~p---------~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         254 TLI----------------FP---------PEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             ccc----------------CC---------CcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence            100                00         002367899999999876 454   45899999999999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.94  E-value=4.5e-26  Score=168.57  Aligned_cols=174  Identities=37%  Similarity=0.646  Sum_probs=122.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        95 ~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  174 (286)
T cd07847          95 RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVG  174 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhC
Confidence            3589999999999999999999         666      4577899999999876543322333456789999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC--CCc-ccchhhhhhccC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT--TFP-EWSNFCLDKHVK  151 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~  151 (197)
                      ...++.++|+||+|++++++++|..||.+....+....+....+....... .......+..  ..+ ...........+
T Consensus       175 ~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (286)
T cd07847         175 DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQ-QIFSTNQFFKGLSIPEPETREPLESKFP  253 (286)
T ss_pred             CCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHh-hhcccccccccccCCCcccccCHHHHhc
Confidence            555788999999999999999999999888776666555443332211100 0000000000  000 000111122235


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .++..+.+++.+||+.+|++||++.|++.||||
T Consensus       254 ~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         254 NISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=2.9e-26  Score=181.05  Aligned_cols=148  Identities=19%  Similarity=0.262  Sum_probs=118.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC--ccccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~--~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|++.||.||         |||      +++.+||+|||+++.....  ........||+.|+|||.+
T Consensus       138 ~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~  217 (496)
T PTZ00283        138 RTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIW  217 (496)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHh
Confidence            3589999999999999999999         777      5677899999999765432  1222345789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+.. ++.++||||+||++|++++|..||.+.+.......+......                            .....
T Consensus       218 ~~~~-~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~  268 (496)
T PTZ00283        218 RRKP-YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYD----------------------------PLPPS  268 (496)
T ss_pred             CCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCCCC
Confidence            7744 889999999999999999999999888766665554321110                            01144


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      ++..+.+++.+||+.||.+||++.++++|||++.
T Consensus       269 ~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        269 ISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            6789999999999999999999999999999764

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=4.7e-26  Score=169.03  Aligned_cols=175  Identities=42%  Similarity=0.744  Sum_probs=123.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      .++.++|+|||.++.............++..|+|||.+.+
T Consensus        98 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  177 (291)
T cd07870          98 GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLG  177 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeec
Confidence            4578889999999999999999         666      4567899999998765443333334467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh-HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc-hhhhhhcc--
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS-NFCLDKHV--  150 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--  150 (197)
                      ...++.++|+||+||+++++++|..||..... .+.+..+....+.+....+......+.+........ ........  
T Consensus       178 ~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (291)
T cd07870         178 ATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKR  257 (291)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccc
Confidence            55578899999999999999999999976543 344555555555555544433333322221111000 00011111  


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      -..+..+.+++.+||..||++|||+++++.||||
T Consensus       258 ~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         258 LSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             cCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            1135788999999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.94  E-value=3.1e-26  Score=173.69  Aligned_cols=180  Identities=29%  Similarity=0.550  Sum_probs=123.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCcc---ccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE   70 (197)
                      ..+++..++.++.|+++||+||         |+|       ++..++|+|||.+........   ......++..|+|||
T Consensus       109 ~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  188 (342)
T cd07854         109 GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPR  188 (342)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHH
Confidence            4689999999999999999999         555       445679999999876533211   112235688999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCC-CCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .+.+...++.++|+||+||++|++++|+.||...........+................ ....................
T Consensus       189 ~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (342)
T cd07854         189 LLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDL  268 (342)
T ss_pred             HHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHH
Confidence            88764557889999999999999999999998887766665554433222111110000 00000000000001111222


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .+..+.++.+++.+||+.||++|||+++++.||||+....
T Consensus       269 ~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~  308 (342)
T cd07854         269 LPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSC  308 (342)
T ss_pred             ccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccC
Confidence            3567889999999999999999999999999999985543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.94  E-value=3.6e-26  Score=169.13  Aligned_cols=174  Identities=37%  Similarity=0.660  Sum_probs=123.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|+++||+||         ++|      +++.++|+|||.+..............++..|+|||.+.+.
T Consensus        96 ~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  175 (286)
T cd07846          96 GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGD  175 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccc
Confidence            589999999999999999999         555      56788999999987654433333345678899999998765


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC-CCCccc-chhhhhhccCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK-TTFPEW-SNFCLDKHVKNL  153 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~  153 (197)
                      ..++.++|+||+|++++++++|..+|......+....+....+................. ...+.. .........+.+
T Consensus       176 ~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (286)
T cd07846         176 TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKL  255 (286)
T ss_pred             cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCc
Confidence            557789999999999999999999998877666666655544432221110000000000 000000 011122234567


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      +..+.+++.+||+.+|++||++.++++||||
T Consensus       256 ~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         256 SGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             CHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            8999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=2.3e-26  Score=172.42  Aligned_cols=174  Identities=46%  Similarity=0.828  Sum_probs=122.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------C----CCcEEEeecCCccccCCCcc---ccccceeccceeC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------K----SNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRA   68 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~----~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~a   68 (197)
                      .+++..++.++.|++.||+||         |+|      +    ++.+||+|||++........   ......++..|+|
T Consensus       104 ~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  183 (316)
T cd07842         104 SIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRA  183 (316)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccC
Confidence            689999999999999999999         555      4    68899999999886543221   1223466888999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH---------HHHHHHHhhcCCCCCCCCCCCCCCCCCCC---
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI---------DQLFRIFRVLTTPTEDNWPGVSKLPDYKT---  136 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  136 (197)
                      ||.+.+...++.++|+||+||+++++++|+.||.+....         ..+..+...++.+....+......+.+..   
T Consensus       184 PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  263 (316)
T cd07842         184 PELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMK  263 (316)
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhh
Confidence            999876555789999999999999999999999765432         24455555555554443332222222211   


Q ss_pred             -----CCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         137 -----TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       137 -----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                           .................+..+.+++.+||..||++|||+.|+++||||
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         264 DFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                 000000000011113577889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.94  E-value=2.9e-26  Score=172.90  Aligned_cols=149  Identities=21%  Similarity=0.318  Sum_probs=113.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      +.+++..++.++.|++.||+||         |||      +++.++|+|||+++............+||+.|+|||++.+
T Consensus        91 ~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (327)
T cd05617          91 RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG  170 (327)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCC
Confidence            4699999999999999999999         666      5577899999998754332223334578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCC------hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDS------EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      .. ++.++|+||+||++|+|++|..||....      ...........  .+                          ..
T Consensus       171 ~~-~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~--------------------------~~  221 (327)
T cd05617         171 EE-YGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--KP--------------------------IR  221 (327)
T ss_pred             CC-CCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--CC--------------------------CC
Confidence            44 8899999999999999999999996421      11222221110  00                          01


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCC------HHHHhcCcccCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRIN------AENALKHKYFADK  187 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s------~~ell~hp~~~~~  187 (197)
                      ....++..+.+++.+||..||++|++      +++++.||||+..
T Consensus       222 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         222 IPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            11346788999999999999999998      5799999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=3.8e-26  Score=176.16  Aligned_cols=176  Identities=20%  Similarity=0.232  Sum_probs=121.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++.++..++.||+.||+||         |||      .++.++|+|||++........  ......||..|+|||++
T Consensus       180 ~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~  259 (392)
T PHA03207        180 GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELL  259 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHh
Confidence            4689999999999999999999         777      457789999999976543221  12245689999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC---hHHHHHHHHhhcCCCCCCCCCCCCCC-----CCCCCC-Ccccch
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS---EIDQLFRIFRVLTTPTEDNWPGVSKL-----PDYKTT-FPEWSN  143 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~  143 (197)
                      .... ++.++||||+||++|+|++|..||.+..   ....+..+.+..+..+..........     ..+... .+.+. 
T Consensus       260 ~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  337 (392)
T PHA03207        260 ALDP-YCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYT-  337 (392)
T ss_pred             cCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCcc-
Confidence            7644 8899999999999999999999997653   34445555554443322211110000     000000 00000 


Q ss_pred             hhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       144 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ..........+.++.++|.+||..||++|||+.|++.||||+..
T Consensus       338 ~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~  381 (392)
T PHA03207        338 IPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE  381 (392)
T ss_pred             ccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence            00000012356788999999999999999999999999999864

>KOG0664|consensus

Probab=99.94  E-value=2.3e-27  Score=167.34  Aligned_cols=175  Identities=38%  Similarity=0.651  Sum_probs=135.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCC-CccccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGV-PVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~-~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++.+.++-+++||+.||.||         |||      +|..+||||||+++.... ....++..+.|..|+|||++.+
T Consensus       152 ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMG  231 (449)
T KOG0664|consen  152 ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMG  231 (449)
T ss_pred             CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhc
Confidence            589999999999999999999         787      667779999999997654 3345566788999999999999


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCC---CC--CCcccchhhhhhc
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY---KT--TFPEWSNFCLDKH  149 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~  149 (197)
                      .+.|+.++||||+||++.|++.++..|...++...+..|..+++.|.-+.+...++-.+.   ..  +-+...  .+-+.
T Consensus       232 aRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~--vLYtl  309 (449)
T KOG0664|consen  232 ARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQ--RLYKI  309 (449)
T ss_pred             chhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCcc--ceeee
Confidence            888999999999999999999999999999999999999999999876544333321110   00  000000  00000


Q ss_pred             c--CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         150 V--KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       150 ~--~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .  ..-..+..+++.+|+..||.+|++.++++.|++....
T Consensus       310 sS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  310 ASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             cCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence            0  1223467889999999999999999999999998643

>KOG0574|consensus

Probab=99.94  E-value=7.1e-28  Score=171.93  Aligned_cols=162  Identities=22%  Similarity=0.345  Sum_probs=128.8

Q ss_pred             hhHHHhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceecccee
Q psy6390           3 NLIQLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYR   67 (197)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~   67 (197)
                      +++|+..++|+|+++..++++.++||+||         ||.      ..++.||+|||.+..+.+......+.+||+.||
T Consensus       117 DI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWM  196 (502)
T KOG0574|consen  117 DIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWM  196 (502)
T ss_pred             HHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccc
Confidence            67889999999999999999999999999         333      456779999999988766555556779999999


Q ss_pred             CchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          68 APEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        68 aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      |||++..-+ |+.++||||+|++..+|..|++||..-.+...   +.-....|++.+-.                     
T Consensus       197 APEVI~EIG-Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA---IFMIPT~PPPTF~K---------------------  251 (502)
T KOG0574|consen  197 APEVIEEIG-YDTKADIWSLGITAIEMAEGRPPYSDIHPMRA---IFMIPTKPPPTFKK---------------------  251 (502)
T ss_pred             cHHHHHHhc-cchhhhHhhhcchhhhhhcCCCCcccccccce---eEeccCCCCCCCCC---------------------
Confidence            999998755 89999999999999999999999976544322   23333333322110                     


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                        ...-|.++-|++++||..+|++|.||.++++|||++.-...+
T Consensus       252 --PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~~  293 (502)
T KOG0574|consen  252 --PEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGCD  293 (502)
T ss_pred             --hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCccc
Confidence              012356888999999999999999999999999998765543

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.94  E-value=2.5e-26  Score=173.12  Aligned_cols=148  Identities=22%  Similarity=0.265  Sum_probs=118.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||++||+||         |||      +++.++|+|||+++.............||+.|+|||++.+
T Consensus        91 ~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (325)
T cd05602          91 RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHK  170 (325)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcC
Confidence            4588999999999999999999         676      5577899999998754333223334578999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++||||+||++|+|++|..||...+.......+.....                             ...+.++
T Consensus       171 ~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-----------------------------~~~~~~~  220 (325)
T cd05602         171 QP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-----------------------------QLKPNIT  220 (325)
T ss_pred             CC-CCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-----------------------------CCCCCCC
Confidence            44 88999999999999999999999998877666655533100                             0113467


Q ss_pred             HhHHHHHHhhcccCCCCCCCHH----HHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAE----NALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~----ell~hp~~~~~  187 (197)
                      ..+.+++.+||+.||.+|+++.    ++++|+||...
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~  257 (325)
T cd05602         221 NSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI  257 (325)
T ss_pred             HHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence            8999999999999999999876    89999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.5e-26  Score=174.78  Aligned_cols=151  Identities=24%  Similarity=0.343  Sum_probs=116.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-------------------   55 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-------------------   55 (197)
                      ..+++..++.++.|++.||+||         |||      +++.++|+|||++..+.....                   
T Consensus        96 ~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (364)
T cd05599          96 DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFI  175 (364)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccc
Confidence            4689999999999999999999         777      567789999999875422110                   


Q ss_pred             -------------------ccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy6390          56 -------------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV  116 (197)
Q Consensus        56 -------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~  116 (197)
                                         .....+||+.|+|||++.+.. ++.++|+||+||++|+|++|..||...+.......+...
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~  254 (364)
T cd05599         176 SKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG-YNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINW  254 (364)
T ss_pred             cccccccccccchhhcccccccccccCccccCHHHHcCCC-CCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcC
Confidence                               011236899999999997644 889999999999999999999999988776666555431


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCC---HHHHhcCcccCCC
Q psy6390         117 LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN---AENALKHKYFADK  187 (197)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s---~~ell~hp~~~~~  187 (197)
                      ....         ..                .....++..+.++|.+|+. +|.+|++   ++++++||||++.
T Consensus       255 ~~~~---------~~----------------~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         255 KETL---------QF----------------PDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             CCcc---------CC----------------CCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            1000         00                0002367899999999997 9999998   9999999999865

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.5e-26  Score=168.75  Aligned_cols=151  Identities=21%  Similarity=0.301  Sum_probs=116.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|+++||+||         |+|      +++.++|+|||.+........ .....++..|+|||.+.+
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~  175 (285)
T cd05605          97 PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET-IRGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc-cccccCCCCccCcHHhcC
Confidence            4699999999999999999999         666      557799999999876543222 233478899999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|..||.+.........+.........                         .....++
T Consensus       176 ~~-~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~  229 (285)
T cd05605         176 ER-YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE-------------------------EYSEKFS  229 (285)
T ss_pred             CC-CCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc-------------------------ccCcccC
Confidence            44 889999999999999999999999876654433333221111000                         0113367


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ..+.+++.+||+.||++||     +++++++||||...
T Consensus       230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         230 EAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             HHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence            8899999999999999999     99999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.94  E-value=6.4e-26  Score=166.65  Aligned_cols=148  Identities=24%  Similarity=0.338  Sum_probs=112.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.|++||         |+|      +++.++|+|||++..............++..|+|||++..
T Consensus       106 ~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  185 (272)
T cd06637         106 NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC  185 (272)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhcc
Confidence            4589999999999999999999         555      5677999999999765433223334567889999999863


Q ss_pred             ----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          75 ----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        75 ----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                          ...++.++|+||+||++|++++|..||...............   ..                        .....
T Consensus       186 ~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~---~~------------------------~~~~~  238 (272)
T cd06637         186 DENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PA------------------------PRLKS  238 (272)
T ss_pred             ccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC---CC------------------------CCCCC
Confidence                223778999999999999999999999765544333322110   00                        00011


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ...+..+.+|+.+||..||++|||+++++.||||
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         239 KKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            2356789999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0986|consensus

Probab=99.94  E-value=8.3e-27  Score=173.88  Aligned_cols=154  Identities=21%  Similarity=0.292  Sum_probs=123.6

Q ss_pred             HhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390           7 LEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         7 ~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      +....|+|..++.|+.+|+.||++|         +||      +.++|+|+|.|+|..++.... ....+||..|||||+
T Consensus       279 ~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~-~~~rvGT~GYMAPEv  357 (591)
T KOG0986|consen  279 HGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP-IRGRVGTVGYMAPEV  357 (591)
T ss_pred             cCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCc-cccccCcccccCHHH
Confidence            3345799999999999999999999         677      668999999999988765543 334599999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.... |+...|.||+||.+|+|+.|..||.......-...+.+.....                         .++...
T Consensus       358 l~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~-------------------------~~ey~~  411 (591)
T KOG0986|consen  358 LQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED-------------------------PEEYSD  411 (591)
T ss_pred             HcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc-------------------------hhhccc
Confidence            98867 9999999999999999999999998655443333332211111                         122335


Q ss_pred             CCCHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ..|++++++.+.+|..||++|+     +++++-+||||+++
T Consensus       412 kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l  452 (591)
T KOG0986|consen  412 KFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL  452 (591)
T ss_pred             ccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence            6889999999999999999999     57789999999986

>KOG0579|consensus

Probab=99.94  E-value=2.2e-26  Score=178.30  Aligned_cols=157  Identities=22%  Similarity=0.360  Sum_probs=125.2

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+.|+++++..+.+|++.||+||         ||.      -+|-|+|+|||.+.............+||+.|||||++.
T Consensus       124 ~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvm  203 (1187)
T KOG0579|consen  124 GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVM  203 (1187)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchhee
Confidence            35699999999999999999999         444      446689999999876655555566779999999999974


Q ss_pred             ----CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 ----GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ----~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                          ...+|+.++||||||++|.+|..+.+|.+..++...+-++-..-  |     +.+..                   
T Consensus       204 CET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe--P-----PTLlq-------------------  257 (1187)
T KOG0579|consen  204 CETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--P-----PTLLQ-------------------  257 (1187)
T ss_pred             eccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC--C-----CcccC-------------------
Confidence                34569999999999999999999999998888877776654310  0     01111                   


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      +..-+..+.|++.+||..||..||+++++++||||+...+-.
T Consensus       258 PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~SnK  299 (1187)
T KOG0579|consen  258 PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSNK  299 (1187)
T ss_pred             cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcch
Confidence            122356889999999999999999999999999999776543

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=6.7e-26  Score=168.39  Aligned_cols=157  Identities=23%  Similarity=0.350  Sum_probs=121.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++.+++.++.||++||+||         |+|      +++.++|+|||++..............++..|+|||.+.+
T Consensus       113 ~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  192 (292)
T cd06658         113 TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISR  192 (292)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHcc
Confidence            4689999999999999999999         666      5678999999998755433322334567889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..||...........+........                          ......+
T Consensus       193 ~~-~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~  245 (292)
T cd06658         193 LP-YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV--------------------------KDSHKVS  245 (292)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc--------------------------ccccccC
Confidence            44 78899999999999999999999987766555444332111100                          0012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      ..+.+++.+||..||++|||++++++||||+....+.-.
T Consensus       246 ~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~~  284 (292)
T cd06658         246 SVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSCI  284 (292)
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcccc
Confidence            788999999999999999999999999999977665543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0192|consensus

Probab=99.94  E-value=8.6e-26  Score=170.15  Aligned_cols=145  Identities=21%  Similarity=0.212  Sum_probs=116.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc----------ccC------CCC-cEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC----------IKP------KSN-IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~-~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      .+.++...+..++.||+.||+||          ||+      .+. ++||+|||+++.........+...||+.|||||+
T Consensus       136 ~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv  215 (362)
T KOG0192|consen  136 KRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEV  215 (362)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhh
Confidence            46799999999999999999999          556      344 8999999999876554334445689999999999


Q ss_pred             hcCC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+. ..++.++||||+|+++||+++|..||...........+......+.                           ..
T Consensus       216 ~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~---------------------------~p  268 (362)
T KOG0192|consen  216 LRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPP---------------------------IP  268 (362)
T ss_pred             hcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC---------------------------CC
Confidence            9852 4599999999999999999999999999888666655543222221                           11


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...+..+..++.+||+.||++||++.+++.
T Consensus       269 ~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  269 KECPPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             ccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence            226788999999999999999999998753

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.94  E-value=1.2e-25  Score=163.89  Aligned_cols=146  Identities=25%  Similarity=0.386  Sum_probs=115.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.+++.++.|++.|+++|         |+|+      ++.++|+|||.+..............+++.|+|||.+.+
T Consensus        97 ~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (257)
T cd08223          97 KLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN  176 (257)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcC
Confidence            3589999999999999999999         7774      466899999999866443333334567889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..||...+.......+......                            ......+
T Consensus       177 ~~-~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  227 (257)
T cd08223         177 KP-YNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP----------------------------PMPKDYS  227 (257)
T ss_pred             CC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC----------------------------CCccccC
Confidence            44 788999999999999999999999877665554444321110                            0012366


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++.+||+.||++||++.++++||||
T Consensus       228 ~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         228 PELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.94  E-value=4e-26  Score=171.74  Aligned_cols=148  Identities=22%  Similarity=0.237  Sum_probs=116.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.||++||+||         |||      .++.+||+|||+++.............+++.|+|||.+.+
T Consensus        91 ~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (321)
T cd05603          91 RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRK  170 (321)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcC
Confidence            4689999999999999999999         777      5577899999998754332222334568999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...+.......+.....                             ......+
T Consensus       171 ~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-----------------------------~~~~~~~  220 (321)
T cd05603         171 EP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL-----------------------------QLPGGKT  220 (321)
T ss_pred             CC-CCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCC-----------------------------CCCCCCC
Confidence            44 88999999999999999999999988876655555432100                             0113356


Q ss_pred             HhHHHHHHhhcccCCCCCCCH----HHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA----ENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~----~ell~hp~~~~~  187 (197)
                      ..+.+++.+||+.||.+|+++    .++++||||...
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         221 VAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             HHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence            789999999999999999975    499999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.94  E-value=1.1e-25  Score=166.31  Aligned_cols=154  Identities=21%  Similarity=0.342  Sum_probs=117.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      .++.++|+|||.+..............++..|+|||.+..
T Consensus        98 ~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  177 (282)
T cd06643          98 RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMC  177 (282)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccc
Confidence            4689999999999999999999         666      4567899999998765433322334567889999999842


Q ss_pred             ----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          75 ----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        75 ----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                          ...++.++|+||+||++|++++|..||...+.......+.......       .                   ...
T Consensus       178 ~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------~-------------------~~~  231 (282)
T cd06643         178 ETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT-------L-------------------AQP  231 (282)
T ss_pred             cCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC-------C-------------------CCc
Confidence                2336789999999999999999999998776655544443211000       0                   001


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..++..+.+++.+||+.||.+||+++++++||||+....
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  270 (282)
T cd06643         232 SRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN  270 (282)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence            235678999999999999999999999999999986543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0690|consensus

Probab=99.94  E-value=3e-26  Score=165.08  Aligned_cols=148  Identities=22%  Similarity=0.286  Sum_probs=126.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      +.|+|+.++.+-.+|++||.||               +..+++++||+|||+++..-.........+||+.|+|||++-.
T Consensus       263 r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleD  342 (516)
T KOG0690|consen  263 RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLED  342 (516)
T ss_pred             hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhcc
Confidence            5699999999999999999999               4458899999999999876665566677899999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. |+.++|.|.+||++|+|+.|+.||-..+.......|...-...                             +..++
T Consensus       343 nD-YgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kF-----------------------------Pr~ls  392 (516)
T KOG0690|consen  343 ND-YGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKF-----------------------------PRTLS  392 (516)
T ss_pred             cc-ccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccC-----------------------------CccCC
Confidence            45 9999999999999999999999999888776666654321111                             14578


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ++++.|+..+|..||.+|+     .|.||.+|+||.++
T Consensus       393 ~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  393 PEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             HHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence            9999999999999999999     48899999999977

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.93  E-value=5.9e-26  Score=168.13  Aligned_cols=151  Identities=20%  Similarity=0.290  Sum_probs=113.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||.||         |+|      +++.++|+|||.+........ .....++..|+|||.+.+
T Consensus        97 ~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~g~~~y~aPE~~~~  175 (285)
T cd05630          97 AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-ccCCCCCccccChHHHcC
Confidence            4599999999999999999999         666      456789999999876543222 223468999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|..||....................                         .......+
T Consensus       176 ~~-~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~  229 (285)
T cd05630         176 ER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ-------------------------EEYSEKFS  229 (285)
T ss_pred             CC-CCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh-------------------------hhcCccCC
Confidence            55 88999999999999999999999986543211111111100000                         01113467


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+.+|+.+||+.||++|||     ++|+++||||++.
T Consensus       230 ~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         230 PDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             HHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence            78999999999999999999     9999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.93  E-value=2.6e-25  Score=164.63  Aligned_cols=175  Identities=38%  Similarity=0.660  Sum_probs=126.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++.++..++.|++.|++||         ++|      +++.++|+|||.+........ ......++..|+|||.+.
T Consensus        95 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~  174 (288)
T cd07833          95 GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLV  174 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhc
Confidence            3589999999999999999999         444      678899999999876654322 223346788899999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC-CCccc-chhhhh-hcc
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW-SNFCLD-KHV  150 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~-~~~  150 (197)
                      +...++.++|+||+|++++++++|..||.+....+.+..+....+...............+.. .++.. ...... ...
T Consensus       175 ~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (288)
T cd07833         175 GDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYP  254 (288)
T ss_pred             CCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcC
Confidence            764588999999999999999999999988877777777666555544332222221111111 01000 011111 122


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..++..+.+++++||..+|++||+++++++||||
T Consensus       255 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         255 GKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             CccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            3358899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=1e-25  Score=175.87  Aligned_cols=175  Identities=25%  Similarity=0.260  Sum_probs=114.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..++.++.|++.||+||         |||      .++.++|+|||+++.......  ......||..|+|||++
T Consensus       255 ~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~  334 (461)
T PHA03211        255 RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVL  334 (461)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHH
Confidence            4599999999999999999999         777      446789999999976533211  12234689999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC-------hHHHHHHHHhhcCCCCCCCCCCCCC-------CCCCCCCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-------EIDQLFRIFRVLTTPTEDNWPGVSK-------LPDYKTTF  138 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  138 (197)
                      .+.. ++.++||||+||++|++++|..++....       ....+.+++........+.......       ........
T Consensus       335 ~~~~-~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  413 (461)
T PHA03211        335 AGDP-YTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRR  413 (461)
T ss_pred             cCCC-CCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccC
Confidence            7754 8899999999999999998765442211       1233444443322211111000000       00000000


Q ss_pred             cccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         139 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      +.+.... ......++..+.+||.+||..||++|||++|+|+||||++
T Consensus       414 ~~~~~~~-~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        414 PAYTRPA-WTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             CccCCcc-hhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            0000000 0111245678999999999999999999999999999985

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.93  E-value=9.4e-26  Score=164.28  Aligned_cols=152  Identities=22%  Similarity=0.341  Sum_probs=114.6

Q ss_pred             HHhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCch
Q psy6390           6 QLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus         6 ~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      +.....+++..+..++.|+++|++||         |+|      +++.++|+|||.+..............++..|+|||
T Consensus        90 ~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE  169 (256)
T cd06612          90 KITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPE  169 (256)
T ss_pred             HhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHH
Confidence            33345689999999999999999999         555      556789999999887654432333445788999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .+.+.. ++.++|+||+|++++++++|+.||...........+..   ....          .             ....
T Consensus       170 ~~~~~~-~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~----------~-------------~~~~  222 (256)
T cd06612         170 VIQEIG-YNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPPP----------T-------------LSDP  222 (256)
T ss_pred             HHhcCC-CCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCCC----------C-------------CCch
Confidence            987654 78999999999999999999999986554333222111   0000          0             0001


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..++..+.+++.+||+.||++|||+.++++||||
T Consensus       223 ~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         223 EKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             hhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            2356789999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.93  E-value=5e-26  Score=172.79  Aligned_cols=179  Identities=34%  Similarity=0.562  Sum_probs=128.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.+......   .....++..|+|||.+.+
T Consensus       115 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~  191 (345)
T cd07877         115 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLN  191 (345)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccccc---ccccccCCCccCHHHHhC
Confidence            4589999999999999999999         666      5677899999998765332   223467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...++.++|+||+||+++++++|+.||...+....+..+....+.+............  .+....+.............
T Consensus       192 ~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (345)
T cd07877         192 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG  271 (345)
T ss_pred             ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCC
Confidence            5557889999999999999999999998877766666666555544333222211100  00000000111111122234


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      .+..+.++|.+||+.||.+|+++.+++.||||++...++
T Consensus       272 ~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~  310 (345)
T cd07877         272 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD  310 (345)
T ss_pred             CCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCC
Confidence            678899999999999999999999999999999766544

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.93  E-value=9.4e-26  Score=173.47  Aligned_cols=152  Identities=25%  Similarity=0.364  Sum_probs=114.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--------------------   54 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--------------------   54 (197)
                      ..+++..++.++.||+.||+||         |||      .++.++|+|||++..+....                    
T Consensus        96 ~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (382)
T cd05625          96 GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSN  175 (382)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccc
Confidence            4589999999999999999999         777      55778999999975321000                    


Q ss_pred             ---------------------------cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH
Q psy6390          55 ---------------------------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI  107 (197)
Q Consensus        55 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~  107 (197)
                                                 ......+||+.|+|||++.+.. ++.++|+||+||++|+|++|..||.+.+..
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~  254 (382)
T cd05625         176 EWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGQPPFLAQTPL  254 (382)
T ss_pred             cccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC-CCCeeeEEechHHHHHHHhCCCCCCCCCHH
Confidence                                       0011236899999999997654 889999999999999999999999988766


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCC---HHHHhcCccc
Q psy6390         108 DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN---AENALKHKYF  184 (197)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s---~~ell~hp~~  184 (197)
                      .....+........                .         .....++.++.++|.+|+ .+|++|++   ++++++||||
T Consensus       255 ~~~~~i~~~~~~~~----------------~---------p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f  308 (382)
T cd05625         255 ETQMKVINWQTSLH----------------I---------PPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFF  308 (382)
T ss_pred             HHHHHHHccCCCcC----------------C---------CCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCc
Confidence            65555432111100                0         001346789999999976 59999997   9999999999


Q ss_pred             CCCC
Q psy6390         185 ADKT  188 (197)
Q Consensus       185 ~~~~  188 (197)
                      +...
T Consensus       309 ~~~~  312 (382)
T cd05625         309 KTID  312 (382)
T ss_pred             CCcC
Confidence            8753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.93  E-value=2e-25  Score=165.11  Aligned_cols=170  Identities=47%  Similarity=0.857  Sum_probs=124.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|+++||+||         |+|      +++.++|+|||.+........ .....++..|+|||.+.+.
T Consensus       103 ~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~  181 (287)
T cd07838         103 GLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA-LTSVVVTLWYRAPEVLLQS  181 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcc-cccccccccccChHHhccC
Confidence            589999999999999999999         555      557899999999876644322 2233568889999999775


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . .+.++|+||+||++++|++|..||......+...++......+....++.......  ..++...........+.++.
T Consensus       182 ~-~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  258 (287)
T cd07838         182 S-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR--SSFPSYTPRSFKSFVPEICE  258 (287)
T ss_pred             C-CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch--hhcccccccchhhhhhhhhH
Confidence            5 78899999999999999999999998888888777766555443332222111000  00111111112222345678


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .+.+++.+||+.||.+||+++++++||||
T Consensus       259 ~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         259 EGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             HHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            89999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.93  E-value=9.5e-26  Score=167.14  Aligned_cols=160  Identities=19%  Similarity=0.264  Sum_probs=116.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||          |+|      +++.++|+|||++........ .....++..|+|||.+.
T Consensus       102 ~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~  180 (288)
T cd06616         102 SVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA-KTRDAGCRPYMAPERID  180 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc-cccccCccCccCHHHhc
Confidence            5699999999999999999998          666      456789999999876543221 22336788999999997


Q ss_pred             CC--CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 GS--QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~--~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.  ..++.++|+||+||++|++++|..||.....  ....+.+........    ..                 .....
T Consensus       181 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~----~~-----------------~~~~~  237 (288)
T cd06616         181 PSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPI----LS-----------------NSEER  237 (288)
T ss_pred             cccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCc----CC-----------------CcCCC
Confidence            65  3578899999999999999999999976542  122222111111000    00                 00013


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      .++..+.+|+.+||+.||++|||+++++.||||++....+..
T Consensus       238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~~~~~  279 (288)
T cd06616         238 EFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEERNVD  279 (288)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhhcchh
Confidence            367889999999999999999999999999999876554443

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.9e-25  Score=164.45  Aligned_cols=152  Identities=24%  Similarity=0.329  Sum_probs=118.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      ++++..++.++.|+++|++||         |+|      +++.++|+|||.++.............++..|+|||.+.+.
T Consensus        94 ~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  173 (274)
T cd06609          94 KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQS  173 (274)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccC
Confidence            689999999999999999999         555      56789999999998775543333345678889999999775


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . ++.++|+||+|+++|++++|..||...+.......+.......                 ..          ...++.
T Consensus       174 ~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-----------------~~----------~~~~~~  225 (274)
T cd06609         174 G-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPS-----------------LE----------GNKFSK  225 (274)
T ss_pred             C-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCC-----------------Cc----------ccccCH
Confidence            5 8899999999999999999999998766544443332210000                 00          011567


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      .+.+++.+||..+|++|||++++++||||+.....
T Consensus       226 ~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  260 (274)
T cd06609         226 PFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT  260 (274)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence            89999999999999999999999999999876554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.93  E-value=1.5e-25  Score=171.48  Aligned_cols=153  Identities=23%  Similarity=0.270  Sum_probs=117.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||+.||+||         |||      +++.+||+|||++........ ......||+.|+|||++.
T Consensus       137 ~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~  216 (370)
T cd05621         137 YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLK  216 (370)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHh
Confidence            4689999999999999999999         777      557889999999986643222 223457899999999996


Q ss_pred             CCC---CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          74 GSQ---RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        74 ~~~---~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +..   .++.++|+||+||++|+|++|..||...+.......+........   +                      ...
T Consensus       217 ~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~----------------------p~~  271 (370)
T cd05621         217 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN---F----------------------PED  271 (370)
T ss_pred             ccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC---C----------------------CCc
Confidence            532   267899999999999999999999998877666666543211110   0                      000


Q ss_pred             CCCCHhHHHHHHhhcccCCCC--CCCHHHHhcCcccCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFADK  187 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~--R~s~~ell~hp~~~~~  187 (197)
                      ..++..+++++.+||..++.+  |++++++++||||+..
T Consensus       272 ~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         272 VEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             ccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            236788999999999865544  8899999999999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.93  E-value=2.9e-25  Score=164.90  Aligned_cols=156  Identities=22%  Similarity=0.344  Sum_probs=116.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.|++||         |+|      .++.++|+|||.+..............++..|+|||.+.+
T Consensus       105 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  184 (292)
T cd06644         105 RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMC  184 (292)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeecc
Confidence            4689999999999999999999         666      4567899999998754333222334567889999999852


Q ss_pred             ----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          75 ----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        75 ----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                          ...++.++|+||+||++|++++|..||...+.......+......       ..                   ...
T Consensus       185 ~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-------~~-------------------~~~  238 (292)
T cd06644         185 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP-------TL-------------------SQP  238 (292)
T ss_pred             ccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc-------cC-------------------CCC
Confidence                233678999999999999999999999776654444333211000       00                   001


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ...+.++.+++.+||..||++||+++++++||||..+....
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~  279 (292)
T cd06644         239 SKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNR  279 (292)
T ss_pred             cccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccch
Confidence            33567899999999999999999999999999998765443

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=2.4e-25  Score=164.48  Aligned_cols=173  Identities=42%  Similarity=0.753  Sum_probs=130.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|+++||.||         |+|      +++.++|+|||.+........ .....++..|+|||.+.+.
T Consensus        95 ~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~  173 (283)
T cd07830          95 PFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-YTDYVSTRWYRAPEILLRS  173 (283)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC-cCCCCCcccccCceeeecC
Confidence            589999999999999999999         666      457889999999976543322 2234678899999998765


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC-CCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP-DYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...+.++|+||+|++++++++|..||......+....+...++.+....|....... ......+...........+..+
T Consensus       174 ~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (283)
T cd07830         174 TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNAS  253 (283)
T ss_pred             cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCC
Confidence            557889999999999999999999999988888888888877777665444322211 1111111111112222233457


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++++||+.||++|||++|++.||||
T Consensus       254 ~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         254 PEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             HHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            889999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.93  E-value=2.2e-25  Score=165.47  Aligned_cols=150  Identities=21%  Similarity=0.277  Sum_probs=114.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.||+||         |+|      +++.++|+|||.+..............++..|+|||.+..
T Consensus       123 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  202 (291)
T cd06639         123 QRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIAC  202 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcC
Confidence            4689999999999999999999         666      5567899999998765443322334567889999999854


Q ss_pred             CC----CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          75 SQ----RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        75 ~~----~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      ..    .++.++|+||+||++|++++|+.||........+..+......       ..                   ...
T Consensus       203 ~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~-------~~-------------------~~~  256 (291)
T cd06639         203 EQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPP-------TL-------------------LHP  256 (291)
T ss_pred             CCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCC-------CC-------------------Ccc
Confidence            22    2578999999999999999999999877655555443221000       00                   001


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      ...+..+.+++.+||+.+|++||++.++++||||+
T Consensus       257 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         257 EKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             cccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            22456789999999999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.93  E-value=1.8e-25  Score=164.96  Aligned_cols=152  Identities=22%  Similarity=0.294  Sum_probs=113.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.+........ .....++..|+|||.+.+
T Consensus        90 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~  168 (277)
T cd05607          90 RGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT-ITQRAGTNGYMAPEILKE  168 (277)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce-eeccCCCCCccCHHHHcc
Confidence            3588999999999999999999         677      556789999999876644322 233467899999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|..||...........+.......   ..                     ......++
T Consensus       169 ~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~---------------------~~~~~~~~  223 (277)
T cd05607         169 EP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED---EV---------------------KFEHQNFT  223 (277)
T ss_pred             CC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc---cc---------------------ccccccCC
Confidence            55 8899999999999999999999997643322111111100000   00                     00012467


Q ss_pred             HhHHHHHHhhcccCCCCCCCH----HHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA----ENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~----~ell~hp~~~~~  187 (197)
                      .++.+++.+||+.||++||++    ++++.||||+.+
T Consensus       224 ~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         224 EESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             HHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence            889999999999999999999    678899999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.93  E-value=2.3e-25  Score=171.28  Aligned_cols=153  Identities=25%  Similarity=0.336  Sum_probs=113.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--------------------   54 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--------------------   54 (197)
                      ..+++..++.++.||+.||+||         |||      .+++++|+|||++.......                    
T Consensus        96 ~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (381)
T cd05626          96 EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSD  175 (381)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccc
Confidence            4689999999999999999999         777      45678999999875431100                    


Q ss_pred             ---------------------------cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH
Q psy6390          55 ---------------------------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI  107 (197)
Q Consensus        55 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~  107 (197)
                                                 ......+||+.|+|||++.+.. ++.++||||+||++|+|++|..||...+..
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~Pf~~~~~~  254 (381)
T cd05626         176 LWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG-YTQLCDWWSVGVILFEMLVGQPPFLAPTPT  254 (381)
T ss_pred             ccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC-CCCccceeehhhHHHHHHhCCCCCcCCCHH
Confidence                                       0011246899999999997644 889999999999999999999999887765


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhccc--CCCCCCCHHHHhcCcccC
Q psy6390         108 DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIY--CPATRINAENALKHKYFA  185 (197)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~--~p~~R~s~~ell~hp~~~  185 (197)
                      .....+........         .                .....++.++++||.+|+..  ++..|++++++++||||+
T Consensus       255 ~~~~~i~~~~~~~~---------~----------------~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~  309 (381)
T cd05626         255 ETQLKVINWENTLH---------I----------------PPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFS  309 (381)
T ss_pred             HHHHHHHccccccC---------C----------------CCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccC
Confidence            55544432111000         0                00134678999999997654  444599999999999998


Q ss_pred             CCC
Q psy6390         186 DKT  188 (197)
Q Consensus       186 ~~~  188 (197)
                      +..
T Consensus       310 ~~~  312 (381)
T cd05626         310 EVD  312 (381)
T ss_pred             CCC
Confidence            753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.93  E-value=1.4e-25  Score=163.66  Aligned_cols=155  Identities=30%  Similarity=0.413  Sum_probs=116.2

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ....+++..+..++.|+++||++|         |+|      +++.++|+|||.+..............++..|+|||.+
T Consensus        91 ~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~  170 (260)
T PF00069_consen   91 KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVL  170 (260)
T ss_dssp             HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            356799999999999999999999         777      56778999999997643333334455778999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ......+.++|+||+|+++++|++|..||......+....+..........                      .......
T Consensus       171 ~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~  228 (260)
T PF00069_consen  171 QQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS----------------------SSQQSRE  228 (260)
T ss_dssp             TTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH----------------------HTTSHTT
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc----------------------cccccch
Confidence            733448899999999999999999999998874444433332221110000                      0000011


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .+..+.+++.+||+.||++||++.++++||||
T Consensus       229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  229 KSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             SHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             hHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            23789999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.93  E-value=2.9e-25  Score=165.27  Aligned_cols=153  Identities=25%  Similarity=0.343  Sum_probs=118.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.++..++.|++.|++||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus       110 ~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (296)
T cd06655         110 TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR  189 (296)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcC
Confidence            3589999999999999999999         666      5677899999998765443322334467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|..||...+.......+.... .+..                         .....++
T Consensus       190 ~~-~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~-~~~~-------------------------~~~~~~~  242 (296)
T cd06655         190 KA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPEL-------------------------QNPEKLS  242 (296)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-Cccc-------------------------CCcccCC
Confidence            44 7889999999999999999999998877655444332210 0000                         0013366


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+.++|.+||..||++||++.+++.||||+...+
T Consensus       243 ~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~  277 (296)
T cd06655         243 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP  277 (296)
T ss_pred             HHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence            78999999999999999999999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.93  E-value=2.2e-25  Score=164.66  Aligned_cols=148  Identities=25%  Similarity=0.356  Sum_probs=111.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++|++||         |+|      +++.++|+|||.+..............++..|+|||.+..
T Consensus       116 ~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~  195 (282)
T cd06636         116 NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC  195 (282)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCc
Confidence            3488999999999999999999         555      5677899999998765433223334567889999999852


Q ss_pred             ----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          75 ----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        75 ----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                          ...++.++|+||+||++|++++|..||...........+...   ...                        ....
T Consensus       196 ~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~~------------------------~~~~  248 (282)
T cd06636         196 DENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PPP------------------------KLKS  248 (282)
T ss_pred             ccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC---CCC------------------------CCcc
Confidence                233678999999999999999999999765543333222110   000                        0001


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ...+..+.++|.+||..||.+||++.|+++||||
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         249 KKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             cccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            2367889999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=2.1e-25  Score=175.84  Aligned_cols=147  Identities=24%  Similarity=0.367  Sum_probs=118.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++.++..++.|++.||.||         |||      +++.+||+|||+++.......  .....+||+.|+|||++.
T Consensus       165 ~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~  244 (478)
T PTZ00267        165 PFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWE  244 (478)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhC
Confidence            589999999999999999999         777      456789999999987643221  223446899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|+|++|..||.+.+.......+......+                            ....+
T Consensus       245 ~~~-~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  295 (478)
T PTZ00267        245 RKR-YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP----------------------------FPCPV  295 (478)
T ss_pred             CCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC----------------------------CCccC
Confidence            644 8899999999999999999999998887766666554311110                            01236


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      +..+.++|.+||..||++||++++++.|||++.
T Consensus       296 s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        296 SSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence            678999999999999999999999999999864

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.93  E-value=4e-25  Score=163.68  Aligned_cols=157  Identities=26%  Similarity=0.416  Sum_probs=120.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|++.|++||         |+|      .++.++|+|||.+..............++..|+|||.+.+
T Consensus       110 ~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (285)
T cd06648         110 TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISR  189 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcC
Confidence            4689999999999999999999         666      4577899999988755433222233467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..||...+.......+.... .+.   .                      .....++
T Consensus       190 ~~-~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~~---~----------------------~~~~~~~  242 (285)
T cd06648         190 LP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-PPK---L----------------------KNLHKVS  242 (285)
T ss_pred             CC-CCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-CCC---C----------------------cccccCC
Confidence            44 7899999999999999999999998766555554443210 000   0                      0012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      ..+.+++.+||+.+|++||++.++++||||+...++...
T Consensus       243 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~  281 (285)
T cd06648         243 PRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPSSI  281 (285)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHccCcccccCCCcchh
Confidence            789999999999999999999999999999987765543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG1026|consensus

Probab=99.93  E-value=9.4e-26  Score=178.98  Aligned_cols=139  Identities=19%  Similarity=0.258  Sum_probs=115.8

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCcccc-CCCcc-ccccceeccceeCchhhcC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAF-GVPVR-IYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~-~~~~~-~~~~~~~~~~y~aPE~~~~   74 (197)
                      |+..+...++.||+.||+||               |..++..|||+|||+++.. +.+.. ......-+.+|||||.+..
T Consensus       600 L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly  679 (774)
T KOG1026|consen  600 LSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY  679 (774)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc
Confidence            89999999999999999999               6668899999999999854 22221 2223455899999999988


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      ++ |+.++||||+||++||+++ |..||.+..+.+.+..+-..-.                            -..+.++
T Consensus       680 ~k-FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l----------------------------L~~Pe~C  730 (774)
T KOG1026|consen  680 GK-FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL----------------------------LSCPENC  730 (774)
T ss_pred             Cc-ccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc----------------------------ccCCCCC
Confidence            66 9999999999999999998 9999999999988887754211                            1223668


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                      +..+.+|+.+||+.+|++||++.||-
T Consensus       731 P~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  731 PTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             CHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            89999999999999999999999974

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.93  E-value=2.6e-25  Score=168.00  Aligned_cols=154  Identities=19%  Similarity=0.275  Sum_probs=116.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.|++.||+||         |||      .++.++|+|||++........ ......||+.|+|||++.
T Consensus        97 ~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (332)
T cd05623          97 DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ  176 (332)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHh
Confidence            4689999999999999999999         777      557789999999875533222 222357899999999986


Q ss_pred             C----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 G----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ~----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .    ...++.++|+||+||++|+|++|+.||...+.......+........                        ....
T Consensus       177 ~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~p~~  232 (332)
T cd05623         177 AMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ------------------------FPAQ  232 (332)
T ss_pred             ccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc------------------------CCCc
Confidence            3    23478899999999999999999999998877776666543111000                        0011


Q ss_pred             cCCCCHhHHHHHHhhcccCCCC--CCCHHHHhcCcccCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFADK  187 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~--R~s~~ell~hp~~~~~  187 (197)
                      ...++.++++++++||+.++.+  |++++++++||||++.
T Consensus       233 ~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         233 VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             cccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence            1346889999999999765544  6899999999999865

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.93  E-value=4e-25  Score=164.51  Aligned_cols=153  Identities=25%  Similarity=0.347  Sum_probs=116.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.++..++.|++.||+||         |+|      .++.++|+|||.+..............++..|+|||.+.+
T Consensus       111 ~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  190 (296)
T cd06654         111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR  190 (296)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcC
Confidence            3589999999999999999999         666      5677899999998765433322334567889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. .+.++|+||+||++|++++|..||...........+... ..+..                         .....++
T Consensus       191 ~~-~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~-------------------------~~~~~~~  243 (296)
T cd06654         191 KA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL-------------------------QNPEKLS  243 (296)
T ss_pred             CC-CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CCCCC-------------------------CCccccC
Confidence            44 789999999999999999999999877654433322211 00000                         0012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+.+++.+||..||++||+++++++||||.....
T Consensus       244 ~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  278 (296)
T cd06654         244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP  278 (296)
T ss_pred             HHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence            78999999999999999999999999999976543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0603|consensus

Probab=99.93  E-value=1.1e-25  Score=173.65  Aligned_cols=141  Identities=26%  Similarity=0.397  Sum_probs=113.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .++....++..++.||++|+.||         +||       +.++++|+|||.++.....   ....+-|..|.|||++
T Consensus       409 ~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~---~~tp~~t~~y~APEvl  485 (612)
T KOG0603|consen  409 SKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS---CDTPALTLQYVAPEVL  485 (612)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh---hcccchhhcccChhhh
Confidence            34444577888999999999999         666       4466899999999877655   3344568899999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH-HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI-DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .. ..++.++|+||+|++||+|++|+.||...+.. +...++..    +            .++               .
T Consensus       486 ~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~----~------------~~s---------------~  533 (612)
T KOG0603|consen  486 AI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQM----P------------KFS---------------E  533 (612)
T ss_pred             cc-CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcC----C------------ccc---------------c
Confidence            86 44999999999999999999999999876655 33444321    1            000               4


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .+|..+++|++.||+.||.+|+++.++..|||+
T Consensus       534 ~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  534 CVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             ccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            488999999999999999999999999999999

>KOG0670|consensus

Probab=99.93  E-value=9.4e-27  Score=176.29  Aligned_cols=173  Identities=29%  Similarity=0.417  Sum_probs=127.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCCC-------cEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKSN-------IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~~-------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .|....++.|+.|+.-||..|         |||+|+       .+||||||.|...+....  +....+..|.|||++.+
T Consensus       532 GL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei--tPYLVSRFYRaPEIiLG  609 (752)
T KOG0670|consen  532 GLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI--TPYLVSRFYRAPEIILG  609 (752)
T ss_pred             ceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccc--cHHHHHHhccCcceeec
Confidence            588899999999999999999         999664       459999999977655432  23456889999999998


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCC-CCCCCC-----------------
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK-LPDYKT-----------------  136 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------------  136 (197)
                      -+ |+...|+||+||+|||+.+|+..|.+.++...+...+.+-|..+......... ...|..                 
T Consensus       610 ~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~  688 (752)
T KOG0670|consen  610 LP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREK  688 (752)
T ss_pred             Cc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEecccccccee
Confidence            55 99999999999999999999999999999999999998888876532111000 000000                 


Q ss_pred             --CCccc-------ch----hhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         137 --TFPEW-------SN----FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       137 --~~~~~-------~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                        .+.-.       ..    +........+-..+++|+.+||..||++|+|..++|+||||+.
T Consensus       689 ~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  689 RTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             EEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence              00000       00    0000111223356889999999999999999999999999974

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.8e-25  Score=166.53  Aligned_cols=154  Identities=20%  Similarity=0.283  Sum_probs=115.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||++||+||         |||      .++.++|+|||.+........ ......||+.|+|||++.
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05597          97 DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQ  176 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHh
Confidence            4699999999999999999999         666      557789999999876543222 122346899999999986


Q ss_pred             C----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 G----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ~----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .    ...++.++|+||+||++|+|++|+.||......+....+........                        ....
T Consensus       177 ~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~~~~  232 (331)
T cd05597         177 AMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ------------------------FPPD  232 (331)
T ss_pred             hccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc------------------------CCCc
Confidence            3    23367899999999999999999999988776666555532110000                        0011


Q ss_pred             cCCCCHhHHHHHHhhcccCCCC--CCCHHHHhcCcccCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFADK  187 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~--R~s~~ell~hp~~~~~  187 (197)
                      ...++..+++++++||+.++++  |++++++++||||.+.
T Consensus       233 ~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         233 VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            1337789999999999764443  7899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.93  E-value=5.1e-25  Score=160.43  Aligned_cols=146  Identities=22%  Similarity=0.278  Sum_probs=116.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||.||         |+|      +++.++|+|||.++.............++..|+|||.+.+
T Consensus        96 ~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (256)
T cd08529          96 RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCED  175 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcC
Confidence            5689999999999999999999         666      4477899999998876554333344567889999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||+++++++|..||...+.......+.......                            .....+
T Consensus       176 ~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  226 (256)
T cd08529         176 KP-YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP----------------------------VSQMYS  226 (256)
T ss_pred             CC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CccccC
Confidence            54 7899999999999999999999998877655555543211110                            002356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++.+||+.+|++||++.++++|||+
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         227 QQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            789999999999999999999999999995

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.93  E-value=1.6e-25  Score=169.82  Aligned_cols=178  Identities=35%  Similarity=0.617  Sum_probs=127.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+.......   ....++..|++||.+.+
T Consensus       113 ~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~  189 (343)
T cd07880         113 EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEM---TGYVVTRWYRAPEVILN  189 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCc---cccccCCcccCHHHHhC
Confidence            4699999999999999999999         666      56778999999987654322   23356889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC--CCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL--PDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...++.++|+||+|++++++++|..||...+.......+......++..........  ..+....+...........+.
T Consensus       190 ~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (343)
T cd07880         190 WMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPN  269 (343)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccC
Confidence            444788999999999999999999999988776666666554443322211111100  000011111111112223356


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      .+..+.+++.+||+.||++|||+.+++.||||+...+.
T Consensus       270 ~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~  307 (343)
T cd07880         270 ANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP  307 (343)
T ss_pred             CChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence            78899999999999999999999999999999876443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3.8e-25  Score=162.58  Aligned_cols=149  Identities=26%  Similarity=0.346  Sum_probs=113.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.+..............++..|+|||.+..
T Consensus       108 ~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  187 (275)
T cd06608         108 KRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIAC  187 (275)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcc
Confidence            4689999999999999999999         555      5677899999998765443333344567889999998853


Q ss_pred             ----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          75 ----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        75 ----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                          ...++.++|+||+||+++++++|..||...........+....   ..    ..                   ...
T Consensus       188 ~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~----~~-------------------~~~  241 (275)
T cd06608         188 DEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP---PP----TL-------------------KSP  241 (275)
T ss_pred             cccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC---CC----CC-------------------Cch
Confidence                2336788999999999999999999997665544444432210   00    00                   001


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ...+..+.+++.+||..||++|||++++++|||+
T Consensus       242 ~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         242 ENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             hhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            2256789999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.3e-25  Score=171.03  Aligned_cols=152  Identities=24%  Similarity=0.344  Sum_probs=114.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc------------------
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR------------------   55 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~------------------   55 (197)
                      ...+++..++.++.|++.||+||         |||      .++.++|+|||+++.......                  
T Consensus        95 ~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (377)
T cd05629          95 YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRID  174 (377)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccc
Confidence            35689999999999999999999         777      456789999999863211000                  


Q ss_pred             -----------------------------ccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh
Q psy6390          56 -----------------------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE  106 (197)
Q Consensus        56 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~  106 (197)
                                                   .....+||+.|+|||++.+.. ++.++|+||+||++|+|++|..||.....
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~  253 (377)
T cd05629         175 NRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQG-YGQECDWWSLGAIMFECLIGWPPFCSENS  253 (377)
T ss_pred             cccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCC-CCCceeeEecchhhhhhhcCCCCCCCCCH
Confidence                                         001236899999999997644 88999999999999999999999988777


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCC---CCHHHHhcCcc
Q psy6390         107 IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATR---INAENALKHKY  183 (197)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R---~s~~ell~hp~  183 (197)
                      .+....+.......         ..+                ....++.++.++|.+||. +|.+|   +++.+++.|||
T Consensus       254 ~~~~~~i~~~~~~~---------~~p----------------~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~  307 (377)
T cd05629         254 HETYRKIINWRETL---------YFP----------------DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPF  307 (377)
T ss_pred             HHHHHHHHccCCcc---------CCC----------------CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCC
Confidence            66665554311100         000                012367899999999998 77775   59999999999


Q ss_pred             cCCC
Q psy6390         184 FADK  187 (197)
Q Consensus       184 ~~~~  187 (197)
                      |++.
T Consensus       308 ~~~~  311 (377)
T cd05629         308 FRGV  311 (377)
T ss_pred             cCCC
Confidence            9864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.93  E-value=3e-25  Score=163.88  Aligned_cols=149  Identities=21%  Similarity=0.308  Sum_probs=113.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |||      +++.++|+|||++.......  .....++..|+|||.+..
T Consensus        92 ~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~  169 (279)
T cd05633          92 GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVGTHGYMAPEVLQK  169 (279)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--ccCcCCCcCccCHHHhcC
Confidence            4589999999999999999999         666      56778999999987554322  223467899999999865


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH--HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI--DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...++.++|+||+||+++++++|..||......  ........   ...                         ......
T Consensus       170 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~-------------------------~~~~~~  221 (279)
T cd05633         170 GTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---TVN-------------------------VELPDS  221 (279)
T ss_pred             CCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh---cCC-------------------------cCCccc
Confidence            444789999999999999999999999754322  12222110   000                         001134


Q ss_pred             CCHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADKT  188 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~~  188 (197)
                      .+..+.++|.+||..||++|+     +++++++||||++..
T Consensus       222 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         222 FSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             cCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence            678899999999999999999     699999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.93  E-value=4.9e-25  Score=168.76  Aligned_cols=153  Identities=24%  Similarity=0.300  Sum_probs=117.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||+.||+||         |||      +++.+||+|||++........ ......||+.|+|||++.
T Consensus       137 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~  216 (371)
T cd05622         137 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK  216 (371)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHh
Confidence            4689999999999999999999         777      557789999999986643221 223457899999999996


Q ss_pred             CCC---CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          74 GSQ---RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        74 ~~~---~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +..   .++.++|+||+||++|+|++|..||...+.......+........                +         ...
T Consensus       217 ~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~----------------~---------~~~  271 (371)
T cd05622         217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT----------------F---------PDD  271 (371)
T ss_pred             ccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc----------------C---------CCc
Confidence            532   267899999999999999999999998877666666543211100                0         011


Q ss_pred             CCCCHhHHHHHHhhcccCCCC--CCCHHHHhcCcccCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFADK  187 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~--R~s~~ell~hp~~~~~  187 (197)
                      ..++..++++|.+||..++.+  |++++++++||||++.
T Consensus       272 ~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         272 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            347889999999999844433  7899999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.93  E-value=1.3e-25  Score=172.32  Aligned_cols=151  Identities=25%  Similarity=0.360  Sum_probs=113.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC---------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP---------------------   53 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~---------------------   53 (197)
                      ..+++..++.++.||+.||+||         |||      .++.++|+|||++..+...                     
T Consensus        96 ~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (376)
T cd05598          96 GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSE  175 (376)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccc
Confidence            4589999999999999999999         777      5567899999997532100                     


Q ss_pred             ----------------------ccccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHH
Q psy6390          54 ----------------------VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLF  111 (197)
Q Consensus        54 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~  111 (197)
                                            .......+||+.|+|||++.+.. ++.++||||+||++|+|++|..||.+....+...
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~  254 (376)
T cd05598         176 EWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGQPPFLADTPAETQL  254 (376)
T ss_pred             cccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC-CCcceeeeeccceeeehhhCCCCCCCCCHHHHHH
Confidence                                  00011236899999999997644 8899999999999999999999999887665554


Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCC---CHHHHhcCcccCCC
Q psy6390         112 RIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI---NAENALKHKYFADK  187 (197)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---s~~ell~hp~~~~~  187 (197)
                      .+........                .         .....++..+.++|.+|+ .+|++|+   ++.++++||||++.
T Consensus       255 ~i~~~~~~~~----------------~---------~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         255 KVINWETTLH----------------I---------PSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             HHhccCcccc----------------C---------CCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence            4432110000                0         001346788999999976 5999999   99999999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.93  E-value=1.6e-25  Score=170.99  Aligned_cols=151  Identities=25%  Similarity=0.344  Sum_probs=115.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-------------------   55 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-------------------   55 (197)
                      ..+++..++.++.|++.||+||         |||      .++.++|+|||++........                   
T Consensus        96 ~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (360)
T cd05627          96 DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQN  175 (360)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccc
Confidence            4699999999999999999999         676      557789999999875422100                   


Q ss_pred             ----------------ccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q psy6390          56 ----------------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT  119 (197)
Q Consensus        56 ----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  119 (197)
                                      .....+||+.|+|||++.+.. ++.++|+||+||++|+|++|..||...........+......
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~  254 (360)
T cd05627         176 MNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKET  254 (360)
T ss_pred             cccccccccccccccccccccCCCccccCHHHHcCCC-CCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCc
Confidence                            011346899999999997744 889999999999999999999999988776666555431100


Q ss_pred             CCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCC---CHHHHhcCcccCCC
Q psy6390         120 PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI---NAENALKHKYFADK  187 (197)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---s~~ell~hp~~~~~  187 (197)
                      .         .       ++         ....++..++++|.+|+ .||.+|+   +++++++||||++.
T Consensus       255 ~---------~-------~p---------~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         255 L---------V-------FP---------PEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             e---------e-------cC---------CCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence            0         0       00         00236789999999976 5999999   48999999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.93  E-value=6e-25  Score=166.12  Aligned_cols=176  Identities=19%  Similarity=0.312  Sum_probs=115.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||          |||      +++.+||+|||++.......  .....++..|+|||.+.
T Consensus        98 ~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~  175 (333)
T cd06650          98 GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ  175 (333)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc--cccCCCCccccCHHHhc
Confidence            4589999999999999999998          666      45678999999987553321  22346789999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC-CCCCCCCCCCC-C--------CCCCCCCc--cc
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT-PTEDNWPGVSK-L--------PDYKTTFP--EW  141 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~--------~~~~~~~~--~~  141 (197)
                      +.. ++.++|+||+||++|++++|+.||...........+...... +.......... .        +.......  ..
T Consensus       176 ~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (333)
T cd06650         176 GTH-YSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFEL  254 (333)
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHH
Confidence            644 889999999999999999999999876543332221111100 00000000000 0        00000000  00


Q ss_pred             chhhhhhc-----cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         142 SNFCLDKH-----VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       142 ~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ........     ....+.++.+|+.+||+.||++|||++|++.||||+...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         255 LDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             HHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence            00000000     113567899999999999999999999999999998653

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.93  E-value=3.9e-25  Score=161.90  Aligned_cols=152  Identities=23%  Similarity=0.318  Sum_probs=115.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc----cccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI----YTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~----~~~~~~~~~y~aPE   70 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.+.........    .....++..|++||
T Consensus        97 ~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe  176 (267)
T cd06610          97 GGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPE  176 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChH
Confidence            3589999999999999999999         555      5677899999998766543222    12345788999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .+......+.++|+||+||+++++++|..||...+...........   .+.    ....                ....
T Consensus       177 ~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~----~~~~----------------~~~~  233 (267)
T cd06610         177 VMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPP----SLET----------------GADY  233 (267)
T ss_pred             HHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCC----CcCC----------------cccc
Confidence            9876545789999999999999999999999877655444443321   000    0000                0002


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..++..+.+++.+||..||++||+++++++||||
T Consensus       234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         234 KKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             ccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            3567889999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.93  E-value=5.5e-25  Score=163.85  Aligned_cols=152  Identities=26%  Similarity=0.417  Sum_probs=118.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus       112 ~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  191 (297)
T cd06659         112 TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISR  191 (297)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHcc
Confidence            4589999999999999999999         555      5677899999998765443333344568899999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||+++++++|..||...........+...   .. ..                      .......+
T Consensus       192 ~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~-~~----------------------~~~~~~~~  244 (297)
T cd06659         192 TP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PP-PK----------------------LKNAHKIS  244 (297)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CC-CC----------------------ccccCCCC
Confidence            44 789999999999999999999999877665555443221   00 00                      00113356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ..+.+++.+||+.+|++||+++++++||||.+..
T Consensus       245 ~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~  278 (297)
T cd06659         245 PVLRDFLERMLTREPQERATAQELLDHPFLLQTG  278 (297)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhhChhhccCC
Confidence            7889999999999999999999999999997553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.93  E-value=1.6e-25  Score=169.46  Aligned_cols=179  Identities=37%  Similarity=0.645  Sum_probs=127.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-----ccccceeccceeCch
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-----IYTHEVVTLWYRAPE   70 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-----~~~~~~~~~~y~aPE   70 (197)
                      .+++..+..++.|++.||+||         |+|      +++.++|+|||.+........     ......++..|+|||
T Consensus       103 ~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  182 (337)
T cd07852         103 ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPE  182 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCce
Confidence            578899999999999999999         565      567889999999876543221     122345788999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC--CCCCCCCcccchhhhhh
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL--PDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  148 (197)
                      .+.+....+.++|+||+|+++|++++|+.||.+....+...++....+.+....+......  .................
T Consensus       183 ~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (337)
T cd07852         183 ILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDE  262 (337)
T ss_pred             eeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhh
Confidence            9876555788999999999999999999999988877777777666554432211111000  00000000001111122


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+..+..+.+++.+||+.||++|||+.++++|||+++...
T Consensus       263 ~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~  303 (337)
T cd07852         263 LLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN  303 (337)
T ss_pred             hccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence            23447889999999999999999999999999999987643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.93  E-value=6.7e-25  Score=162.49  Aligned_cols=151  Identities=21%  Similarity=0.315  Sum_probs=116.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|++.||.||         |+|      +++.++|+|||.+....... ......++..|+|||.+.+
T Consensus        97 ~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~g~~~~~aPE~~~~  175 (285)
T cd05632          97 PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-SIRGRVGTVGYMAPEVLNN  175 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-cccCCCCCcCccChHHhcC
Confidence            3699999999999999999999         666      55779999999987654322 1234468999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||+++++++|..||...........+.........                         ......+
T Consensus       176 ~~-~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~  229 (285)
T cd05632         176 QR-YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE-------------------------VYSAKFS  229 (285)
T ss_pred             CC-CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc-------------------------ccCccCC
Confidence            44 889999999999999999999999877654443333221111100                         0113356


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+.+|+.+||+.||++||+     +++++.|+||++.
T Consensus       230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         230 EEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            78899999999999999999     8899999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.93  E-value=5.4e-25  Score=161.56  Aligned_cols=145  Identities=24%  Similarity=0.399  Sum_probs=110.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCC-cEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSN-IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~-~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++.+++.++.|+++|++||         |+|      +++ .++|+|||.+.......    ...++..|+|||.+.+
T Consensus       105 ~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~  180 (267)
T PHA03390        105 KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS----CYDGTLDYFSPEKIKG  180 (267)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc----cCCCCCcccChhhhcC
Confidence            699999999999999999999         566      334 79999999987664332    2356889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHH-HHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ-LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++|+||+|++++++++|..||........ ...+.......                          ....+..
T Consensus       181 ~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~  233 (267)
T PHA03390        181 HN-YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKK--------------------------LPFIKNV  233 (267)
T ss_pred             CC-CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhccc--------------------------CCccccc
Confidence            44 78899999999999999999999975543321 11111110000                          0111347


Q ss_pred             CHhHHHHHHhhcccCCCCCCC-HHHHhcCcccCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRIN-AENALKHKYFAD  186 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s-~~ell~hp~~~~  186 (197)
                      +..+.++|.+||+.||.+|++ ++++++||||+.
T Consensus       234 ~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        234 SKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             CHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence            789999999999999999996 599999999973

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=2.7e-25  Score=176.00  Aligned_cols=171  Identities=23%  Similarity=0.238  Sum_probs=115.7

Q ss_pred             CHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhcCCC
Q psy6390          13 GTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLLGSQ   76 (197)
Q Consensus        13 ~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~   76 (197)
                      ....++.++.|++.||+||         |||      .++.+||+|||+++.+..... ......||..|+|||++.+..
T Consensus       265 ~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  344 (501)
T PHA03210        265 LLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDG  344 (501)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCC
Confidence            4567889999999999999         777      557789999999987654322 223457899999999997754


Q ss_pred             CCCCchhhhhhhHHHHHHHhCCC-CCCC--CChHHHHHHHHhhcCCCCCCCCCCCC-CC------CCCCCCCcccchhhh
Q psy6390          77 RYSCPVDVWSIGCIFAEIATRKP-LFQG--DSEIDQLFRIFRVLTTPTEDNWPGVS-KL------PDYKTTFPEWSNFCL  146 (197)
Q Consensus        77 ~~~~~~Diws~g~~l~~ll~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~  146 (197)
                       ++.++||||+||++|+|++|.. |+..  ......+.++...+.....+ ++... ..      ..+..........  
T Consensus       345 -~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~i~~~~~~~~~~~~~~~--  420 (501)
T PHA03210        345 -YCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEE-FPDPPCKLFDYIDSAEIDHAGHSVPPL--  420 (501)
T ss_pred             -CCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhh-cCCcHHHHHHHhhhhhcccCccchhhH--
Confidence             8899999999999999999764 4432  23445555555544432222 11100 00      0000000000000  


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                       -....++.++.++|.+||+.||.+|||+.|+++||||....
T Consensus       421 -~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        421 -IRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             -HHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence             00123567889999999999999999999999999998754

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=8.7e-25  Score=159.85  Aligned_cols=147  Identities=25%  Similarity=0.416  Sum_probs=113.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc---ccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~---~~~~~~~~y~aPE~   71 (197)
                      ..+++..++.++.|++.|++||         |+|      +++.++|+|||.++.........   ....++..|+|||.
T Consensus        99 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  178 (263)
T cd06625          99 GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEV  178 (263)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcce
Confidence            4689999999999999999999         555      55789999999987553321111   23456789999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. .+.++|+||+|+++|++++|+.||...+.......+......                           .....
T Consensus       179 ~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------~~~~~  230 (263)
T cd06625         179 ISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN---------------------------PQLPS  230 (263)
T ss_pred             eccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC---------------------------CCCCc
Confidence            98755 889999999999999999999999876555444333221000                           01113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+..+.+++.+||..+|.+|||+.++++||||
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         231 HVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             cCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            467889999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0595|consensus

Probab=99.92  E-value=2.6e-25  Score=163.76  Aligned_cols=150  Identities=27%  Similarity=0.397  Sum_probs=120.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC------------CcEEEeecCCccccCCCccccccceeccceeC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS------------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA   68 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~a   68 (197)
                      ++++|+.++.++.||+.||++|         |||.|            ..+||+|||+|+.+.+. ....+.+|++.|||
T Consensus       104 ~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~-~~a~tlcGSplYMA  182 (429)
T KOG0595|consen  104 GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG-SMAETLCGSPLYMA  182 (429)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch-hHHHHhhCCccccC
Confidence            4799999999999999999999         88822            46799999999988644 44566799999999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ||++.... |+.|+|+||+|+++|++++|+.||...+..+.+..+...-...+                          .
T Consensus       183 PEV~~~~~-YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~--------------------------~  235 (429)
T KOG0595|consen  183 PEVIMSQQ-YDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVP--------------------------V  235 (429)
T ss_pred             HHHHHhcc-ccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccC--------------------------c
Confidence            99998655 99999999999999999999999999988887775543211110                          0


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .....+....+|+...+..||..|.+..+-+.|+++...
T Consensus       236 ~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~  274 (429)
T KOG0595|consen  236 LPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN  274 (429)
T ss_pred             hhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence            002245567789999999999999999999999887643

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.92  E-value=1.5e-24  Score=163.51  Aligned_cols=179  Identities=17%  Similarity=0.206  Sum_probs=113.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC------CcEEEeecCCccccCCCc-------cccccceecccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPV-------RIYTHEVVTLWYR   67 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~~~-------~~~~~~~~~~~y~   67 (197)
                      ..+++..++.++.|++.||+||         |||+|      +.++++||+.+.......       .......++..|+
T Consensus        96 ~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  175 (327)
T cd08227          96 DGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWL  175 (327)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceeccc
Confidence            3589999999999999999999         77744      556899988654322110       0112235577899


Q ss_pred             CchhhcCC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC-------CCCCC----------CCCC
Q psy6390          68 APEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP-------TEDNW----------PGVS  129 (197)
Q Consensus        68 aPE~~~~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~----------~~~~  129 (197)
                      |||.+.+. ..++.++||||+||+++++++|..||...................       +.+..          ....
T Consensus       176 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (327)
T cd08227         176 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLG  255 (327)
T ss_pred             ChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCC
Confidence            99999753 347899999999999999999999998655443332222110000       00000          0000


Q ss_pred             CCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         130 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ........................+..+.+++.+||+.||++|||++++++||||++..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         256 ESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             cccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence            00000000000000001112234577899999999999999999999999999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.92  E-value=8.3e-25  Score=165.02  Aligned_cols=178  Identities=35%  Similarity=0.583  Sum_probs=126.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|+++||+||         |+|      +++.++|+|||.+......   .....++..|+|||.+.+
T Consensus       103 ~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~  179 (328)
T cd07856         103 RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ---MTGYVSTRYYRAPEIMLT  179 (328)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC---cCCCcccccccCceeeec
Confidence            4688899999999999999999         555      5577899999998754322   123356788999999866


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...++.++|+||+||+++++++|..||...........+.+.++.++.+.........  .+................+.
T Consensus       180 ~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (328)
T cd07856         180 WQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKN  259 (328)
T ss_pred             cCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCC
Confidence            4557899999999999999999999998887766666666655554432221111000  00000000001111122345


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      .+..+.++|.+||+.+|++|||+++++.||||...+.+
T Consensus       260 ~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~  297 (328)
T cd07856         260 ADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP  297 (328)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence            77899999999999999999999999999999877665

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0611|consensus

Probab=99.92  E-value=4.4e-25  Score=163.25  Aligned_cols=147  Identities=21%  Similarity=0.335  Sum_probs=124.9

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+.|+|.+++.+++||.+|+-||               |...|+++||+|||++-.+.... ...+.+|++.|.+||++
T Consensus       146 er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k-fLqTFCGSPLYASPEIv  224 (668)
T KOG0611|consen  146 ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK-FLQTFCGSPLYASPEIV  224 (668)
T ss_pred             HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcccc-HHHHhcCCcccCCcccc
Confidence            345799999999999999999999               45588999999999998775543 45567999999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+.+.-++.+|.||+|+++|.+..|..||++.+......+|.+....-                              +.
T Consensus       225 NG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE------------------------------P~  274 (668)
T KOG0611|consen  225 NGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE------------------------------PE  274 (668)
T ss_pred             CCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC------------------------------CC
Confidence            997766789999999999999999999999998887777775432211                              33


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      .+.++..||+-||..||++|.|+++|..|=|+.
T Consensus       275 ~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  275 TPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence            567889999999999999999999999998875

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.92  E-value=1.3e-24  Score=160.36  Aligned_cols=149  Identities=22%  Similarity=0.300  Sum_probs=114.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++|++||         |+|      +++.++|+|||.+.......  .....++..|+|||.+.+
T Consensus        92 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~  169 (278)
T cd05606          92 GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVGTHGYMAPEVLQK  169 (278)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--CcCcCCCcCCcCcHHhcC
Confidence            4689999999999999999999         566      56778999999987554321  223468899999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHH--HHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL--FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...++.++|+||+|++++++++|..||.........  .....   ...                         ......
T Consensus       170 ~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~-------------------------~~~~~~  221 (278)
T cd05606         170 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---TMA-------------------------VELPDS  221 (278)
T ss_pred             CCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh---ccC-------------------------CCCCCc
Confidence            545788999999999999999999999765322111  11110   000                         001133


Q ss_pred             CCHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADKT  188 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~~  188 (197)
                      .+..+.+++.+||..+|++|+     +++++++||||++..
T Consensus       222 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         222 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence            578999999999999999999     999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=1.7e-24  Score=158.63  Aligned_cols=146  Identities=25%  Similarity=0.436  Sum_probs=112.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc------ccccceeccceeC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR------IYTHEVVTLWYRA   68 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~------~~~~~~~~~~y~a   68 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.++.......      ......++..|+|
T Consensus       101 ~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~  180 (267)
T cd06628         101 GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMA  180 (267)
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccC
Confidence            4589999999999999999999         555      567789999999876642111      1112346789999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ||.+.+.. ++.++|+||+||+++++++|..||...........+......                            .
T Consensus       181 pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~  231 (267)
T cd06628         181 PEVVKQTS-YTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASP----------------------------E  231 (267)
T ss_pred             hhHhccCC-CCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCC----------------------------c
Confidence            99987644 788999999999999999999999876654444333221000                            0


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .....+..+.+++.+||+.||.+||++.++++||||
T Consensus       232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         232 IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             CCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            113367889999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.92  E-value=7.9e-25  Score=163.01  Aligned_cols=154  Identities=26%  Similarity=0.351  Sum_probs=115.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.++..++.|++.||+||         |+|      .++.++|+|||.+..............++..|++||.+.+
T Consensus       110 ~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (297)
T cd06656         110 TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR  189 (297)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcC
Confidence            4588999999999999999999         666      5577899999998765443333334467889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|++++|..||...+.......+... +.+.                         .......+
T Consensus       190 ~~-~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~-~~~~-------------------------~~~~~~~~  242 (297)
T cd06656         190 KA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE-------------------------LQNPERLS  242 (297)
T ss_pred             CC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC-CCCC-------------------------CCCccccC
Confidence            44 789999999999999999999999765543222111100 0000                         00012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..+.+++.+||..||++||+++++++||||+.....
T Consensus       243 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~  278 (297)
T cd06656         243 AVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL  278 (297)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCchhcccccc
Confidence            788999999999999999999999999999866544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.92  E-value=1.2e-24  Score=159.51  Aligned_cols=150  Identities=23%  Similarity=0.326  Sum_probs=110.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.++..++.|++.|++||         |+|      .++.++|+|||.+..............++..|+|||.+..
T Consensus       101 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  180 (267)
T cd06645         101 GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAV  180 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhcc
Confidence            4689999999999999999999         666      4567899999998765433322334567899999999742


Q ss_pred             --CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 --SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 --~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                        ...++.++|+||+||++|++++|..||..................++           ..             .....
T Consensus       181 ~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------~~-------------~~~~~  236 (267)
T cd06645         181 ERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPP-----------KL-------------KDKMK  236 (267)
T ss_pred             ccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCC-----------cc-------------cccCC
Confidence              23377899999999999999999999866544333322211100000           00             00023


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKY  183 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~  183 (197)
                      .+..+.+++.+||..+|++||+++++++|||
T Consensus       237 ~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         237 WSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            5678899999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.92  E-value=6.1e-25  Score=181.07  Aligned_cols=151  Identities=25%  Similarity=0.434  Sum_probs=115.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------------ccCCCC-----------------------cEEEeecCCcccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------------IKPKSN-----------------------IVKVADFGLARAF   50 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------------lkp~~~-----------------------~vkl~Dfg~s~~~   50 (197)
                      ..+++..++.++.||+.||.||                |||+|.                       .+||+|||++...
T Consensus       113 g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l  192 (1021)
T PTZ00266        113 GKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNI  192 (1021)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccc
Confidence            4699999999999999999997                555442                       3799999999866


Q ss_pred             CCCccccccceeccceeCchhhcCC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCC
Q psy6390          51 GVPVRIYTHEVVTLWYRAPEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS  129 (197)
Q Consensus        51 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (197)
                      .... ......+|+.|+|||++.+. ..++.++|||||||++|+|++|..||........+..........         
T Consensus       193 ~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~l---------  262 (1021)
T PTZ00266        193 GIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDL---------  262 (1021)
T ss_pred             cccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCC---------
Confidence            4332 22345789999999998652 347889999999999999999999998765544433322110000         


Q ss_pred             CCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         130 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                                         .....+..+.+||.+||..+|.+||++.++|.|||++....
T Consensus       263 -------------------pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        263 -------------------PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP  303 (1021)
T ss_pred             -------------------CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence                               00235678999999999999999999999999999986644

>KOG0577|consensus

Probab=99.92  E-value=5.4e-25  Score=169.26  Aligned_cols=159  Identities=25%  Similarity=0.387  Sum_probs=130.1

Q ss_pred             hhHHHhhhcCCHHHHHHHHHHHHhhhccc---------c------cCCCCcEEEeecCCccccCCCccccccceecccee
Q psy6390           3 NLIQLEWEQVGTYQVKITTRLFLQATSFC---------I------KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYR   67 (197)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------l------kp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~   67 (197)
                      +++....+++.|.+|..|.++.+.||+||         |      ..+.+.|||+|||+|....+-    ...+||+.||
T Consensus       114 DlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA----nsFvGTPywM  189 (948)
T KOG0577|consen  114 DLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA----NSFVGTPYWM  189 (948)
T ss_pred             HHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCch----hcccCCcccc
Confidence            57777889999999999999999999999         3      337788999999999766442    3468999999


Q ss_pred             Cchhhc--CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhh
Q psy6390          68 APEVLL--GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC  145 (197)
Q Consensus        68 aPE~~~--~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (197)
                      |||++.  ..+.|+-++||||+|++..++..+++|+...+....++.|-..-.+       .+. .              
T Consensus       190 APEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesP-------tLq-s--------------  247 (948)
T KOG0577|consen  190 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP-------TLQ-S--------------  247 (948)
T ss_pred             chhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCC-------CCC-C--------------
Confidence            999985  3345899999999999999999999999999999999988542111       111 0              


Q ss_pred             hhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       146 ~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                           ..-|..+++++..||++=|..|||.+++++|+|+......+-
T Consensus       248 -----~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tv  289 (948)
T KOG0577|consen  248 -----NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTV  289 (948)
T ss_pred             -----chhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchH
Confidence                 123567899999999999999999999999999987655443

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.92  E-value=1.4e-24  Score=158.15  Aligned_cols=145  Identities=22%  Similarity=0.354  Sum_probs=114.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|++.|++||         |+|      +++.++|+|||.+..............++..|+|||.+.+.
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  176 (256)
T cd08218          97 LFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENR  176 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCC
Confidence            478999999999999999999         555      55778999999997665433333344678889999998764


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . .+.++|+||+||+++++++|..||......+....+......                            ......+.
T Consensus       177 ~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~  227 (256)
T cd08218         177 P-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYP----------------------------PVSSHYSY  227 (256)
T ss_pred             C-CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCC----------------------------CCcccCCH
Confidence            4 788999999999999999999999877766655554321100                            00133577


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .+.+++.+||+.+|.+||++.++++||||
T Consensus       228 ~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         228 DLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            89999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.92  E-value=6.4e-25  Score=162.11  Aligned_cols=154  Identities=20%  Similarity=0.328  Sum_probs=112.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |+|      .++.++|+|||++.......  .....++..|+|||.+.+
T Consensus        90 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~  167 (279)
T cd06619          90 RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI--AKTYVGTNAYMAPERISG  167 (279)
T ss_pred             hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--ccCCCCChhhcCceeecC
Confidence            4578999999999999999999         666      56788999999997654322  233577899999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHH---HHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ---LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .. ++.++|+||+||++|++++|..||........   ...............                       ....
T Consensus       168 ~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~  223 (279)
T cd06619         168 EQ-YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV-----------------------LPVG  223 (279)
T ss_pred             CC-CCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC-----------------------CCCC
Confidence            44 88999999999999999999999865321110   001111000000000                       0012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+..+.+++.+||+.||++||+++++++||||+....
T Consensus       224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~  261 (279)
T cd06619         224 QFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYND  261 (279)
T ss_pred             cCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccC
Confidence            35678999999999999999999999999999986643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=3.7e-24  Score=158.44  Aligned_cols=153  Identities=19%  Similarity=0.311  Sum_probs=114.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++..+..++.|+++||.||          |+|      +++.++|+|||.+.......  .....++..|+|||.+.+
T Consensus        98 ~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~  175 (286)
T cd06622          98 GIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL--AKTNIGCQSYMAPERIKS  175 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc--cccCCCccCccCcchhcC
Confidence            699999999999999999998          555      55778999999987653322  223457788999999854


Q ss_pred             CC-----CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          75 SQ-----RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        75 ~~-----~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      ..     .++.++|+||+||++|++++|..||...........+.........                         ..
T Consensus       176 ~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~  230 (286)
T cd06622         176 GGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP-------------------------TL  230 (286)
T ss_pred             CCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCC-------------------------CC
Confidence            32     2578999999999999999999999765544433333222111110                         11


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ....+.++.+++.+||+.+|++||++++++.||||......
T Consensus       231 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         231 PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             CcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence            13367889999999999999999999999999999766443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.92  E-value=2.4e-24  Score=157.56  Aligned_cols=149  Identities=26%  Similarity=0.406  Sum_probs=115.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+....... ......++..|++||.+..
T Consensus        88 ~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~  166 (262)
T cd05572          88 GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEYVAPEIILN  166 (262)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCccChhHhcC
Confidence            4589999999999999999999         555      55678999999998765432 1223467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCC--hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDS--EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .. ++.++|+||+|+++|++++|..||....  .......+......+                           .....
T Consensus       167 ~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~  218 (262)
T cd05572         167 KG-YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL---------------------------EFPNY  218 (262)
T ss_pred             CC-CCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC---------------------------CCCcc
Confidence            44 7899999999999999999999998766  444444433111100                           00022


Q ss_pred             CCHhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      .+..+.+++.+||+.||++|++     ++|+++||||++.
T Consensus       219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             cCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence            3678999999999999999999     9999999999975

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.92  E-value=2.7e-24  Score=161.27  Aligned_cols=180  Identities=17%  Similarity=0.213  Sum_probs=115.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-------ccccceecccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-------IYTHEVVTLWYR   67 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-------~~~~~~~~~~y~   67 (197)
                      ..+++..++.++.|+++||+||         |+|      .++.++|+|||.+........       ......++..|+
T Consensus        96 ~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  175 (314)
T cd08216          96 EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWL  175 (314)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccccccccc
Confidence            3589999999999999999999         666      446789999998865422111       112334577899


Q ss_pred             CchhhcCC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC-C-CCCCCCCCCCCCC---CCCccc
Q psy6390          68 APEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT-E-DNWPGVSKLPDYK---TTFPEW  141 (197)
Q Consensus        68 aPE~~~~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~---~~~~~~  141 (197)
                      |||.+... ..++.++|+||+||+++++++|..||.................... . ...+.........   ......
T Consensus       176 aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (314)
T cd08216         176 SPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNN  255 (314)
T ss_pred             CHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccch
Confidence            99998653 3478899999999999999999999987655443322221110000 0 0000000000000   000000


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ............+.++.+++.+||+.||++|||++++++||||++..+
T Consensus       256 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~  303 (314)
T cd08216         256 RDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKR  303 (314)
T ss_pred             hhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcc
Confidence            000001111234567899999999999999999999999999997753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.6e-24  Score=158.34  Aligned_cols=152  Identities=24%  Similarity=0.331  Sum_probs=114.0

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ....+++..+..++.|++.|++||         |+|      +++.++|+|||.+..............++..|+|||.+
T Consensus        94 ~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~  173 (262)
T cd06613          94 TRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVA  173 (262)
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhh
Confidence            335799999999999999999999         666      55678999999987665433233345678899999998


Q ss_pred             cCC--CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          73 LGS--QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        73 ~~~--~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      ...  ..++.++|+||+|+++++|++|..||...........+......+.     ..                   ...
T Consensus       174 ~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~-----~~-------------------~~~  229 (262)
T cd06613         174 AVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP-----KL-------------------KDK  229 (262)
T ss_pred             cccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc-----cc-------------------cch
Confidence            654  2478899999999999999999999987765544433322100000     00                   001


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKY  183 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~  183 (197)
                      ...+..+.+++.+||..+|..|||+++++.|+|
T Consensus       230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         230 EKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             hhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            234567899999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.92  E-value=2.1e-24  Score=159.82  Aligned_cols=158  Identities=29%  Similarity=0.437  Sum_probs=121.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .++...+..++.|++.||+||         |+|      +++.++|+|||.+..............++..|++||.+.+.
T Consensus       112 ~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  191 (286)
T cd06614         112 RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRK  191 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCC
Confidence            699999999999999999999         566      45678999999887654433222334567889999998764


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . ++.++|+||+|+++|++++|..||...........+.......       .                   .....++.
T Consensus       192 ~-~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------~-------------------~~~~~~~~  244 (286)
T cd06614         192 D-YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPP-------L-------------------KNPEKWSP  244 (286)
T ss_pred             C-CCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-------C-------------------cchhhCCH
Confidence            4 7899999999999999999999998766554443332210000       0                   00022567


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhhc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE  195 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~~  195 (197)
                      .+.+++.+||+.+|.+||++.+++.||||++.+....+.+
T Consensus       245 ~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~  284 (286)
T cd06614         245 EFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEFAP  284 (286)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHhhChHhhccCchHhhhh
Confidence            8999999999999999999999999999999877766654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.3e-24  Score=158.80  Aligned_cols=152  Identities=24%  Similarity=0.377  Sum_probs=115.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        96 ~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (277)
T cd06917          96 GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITE  175 (277)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhcc
Confidence            3689999999999999999999         555      5677899999998876544333334467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...++.++|+||+||++|++++|..||...........+...  .+           +.       .       .....+
T Consensus       176 ~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~~-----------~~-------~-------~~~~~~  228 (277)
T cd06917         176 GKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KP-----------PR-------L-------EDNGYS  228 (277)
T ss_pred             CCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC--CC-----------CC-------C-------CcccCC
Confidence            555788999999999999999999999776543322211100  00           00       0       001256


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .++.+++.+||..||++||++.+++.||||++..
T Consensus       229 ~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         229 KLLREFVAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence            7899999999999999999999999999998764

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.92  E-value=2.2e-24  Score=159.67  Aligned_cols=149  Identities=22%  Similarity=0.291  Sum_probs=111.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||.||         |+|      +++.++|+|||.+..............++..|+|||.+..
T Consensus       119 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (286)
T cd06638         119 ERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIAC  198 (286)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhch
Confidence            4588999999999999999999         566      4567899999998766443333334568899999999853


Q ss_pred             ----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          75 ----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        75 ----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                          ...++.++|+||+||++|++++|..||...............   ...    .                   ....
T Consensus       199 ~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~~----~-------------------~~~~  252 (286)
T cd06638         199 EQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN---PPP----T-------------------LHQP  252 (286)
T ss_pred             hhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc---CCC----c-------------------ccCC
Confidence                233678999999999999999999999766543333221110   000    0                   0001


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ...+..+.+++.+||+.||++|||+.|+++|+||
T Consensus       253 ~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         253 ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            2246789999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.92  E-value=1.7e-24  Score=163.50  Aligned_cols=154  Identities=19%  Similarity=0.289  Sum_probs=115.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.|++.||+||         |||      .++.+||+|||++........ ......|++.|+|||++.
T Consensus        97 ~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05624          97 DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQ  176 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHh
Confidence            4689999999999999999999         677      456789999999976644322 122346899999999986


Q ss_pred             CC----CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 GS----QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ~~----~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      +.    ..++.++|+||+||++|+|++|+.||...+..+....+........                        ....
T Consensus       177 ~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~p~~  232 (331)
T cd05624         177 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ------------------------FPSH  232 (331)
T ss_pred             ccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc------------------------CCCc
Confidence            42    2367899999999999999999999988777666655543111000                        0011


Q ss_pred             cCCCCHhHHHHHHhhcccCCCC--CCCHHHHhcCcccCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFADK  187 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~--R~s~~ell~hp~~~~~  187 (197)
                      ...++..+.+++.+||+.++.+  |++++++++||||+..
T Consensus       233 ~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         233 ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence            1346789999999999876654  4689999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.9e-24  Score=156.95  Aligned_cols=148  Identities=24%  Similarity=0.291  Sum_probs=114.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||.||         |+|      +++.++|+|||.+......    ....++..|++||.+.+
T Consensus        92 ~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~y~~pe~~~~  167 (260)
T cd05611          92 GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN----KKFVGTPDYLAPETILG  167 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceecccc----ccCCCCcCccChhhhcC
Confidence            4689999999999999999999         555      5567899999998754331    22356788999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..||...+.......+........                         ......++
T Consensus       168 ~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~  221 (260)
T cd05611         168 VG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWP-------------------------EEVKEFCS  221 (260)
T ss_pred             CC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCC-------------------------CcccccCC
Confidence            55 78999999999999999999999988776655544432111000                         00112467


Q ss_pred             HhHHHHHHhhcccCCCCCCC---HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN---AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s---~~ell~hp~~~~~  187 (197)
                      ..+.+++.+||..||++||+   ++|++.||||++.
T Consensus       222 ~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         222 PEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             HHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence            89999999999999999995   5799999999865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.92  E-value=4.7e-24  Score=158.50  Aligned_cols=155  Identities=25%  Similarity=0.362  Sum_probs=118.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.|++||         |+|      +++.++|+|||.+..............++..|++||.+.+
T Consensus       111 ~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  190 (292)
T cd06657         111 TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR  190 (292)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcC
Confidence            3589999999999999999999         555      5678999999998765443222233467889999998866


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..||...........+.......                          .......+
T Consensus       191 ~~-~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~  243 (292)
T cd06657         191 LP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK--------------------------LKNLHKVS  243 (292)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc--------------------------cCCcccCC
Confidence            44 7889999999999999999999998776655544332211000                          00113356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ..+.+++.+||+.||.+||++++++.||||.....+.
T Consensus       244 ~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~  280 (292)
T cd06657         244 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPS  280 (292)
T ss_pred             HHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCc
Confidence            7889999999999999999999999999998776544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.1e-24  Score=161.10  Aligned_cols=150  Identities=23%  Similarity=0.339  Sum_probs=115.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-------------------   55 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-------------------   55 (197)
                      ..+++..++.++.|+++||+||         |||      +++.++|+|||.+........                   
T Consensus        98 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (316)
T cd05574          98 KCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIP  177 (316)
T ss_pred             CccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccc
Confidence            4689999999999999999999         666      557789999999865432110                   


Q ss_pred             ----------ccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy6390          56 ----------IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW  125 (197)
Q Consensus        56 ----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (197)
                                ......|+..|+|||.+.+.. ++.++|+||+|+++|++++|..||.+.+.......+.......     
T Consensus       178 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-----  251 (316)
T cd05574         178 SETFSEEPSFRSNSFVGTEEYIAPEVISGDG-HGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTF-----  251 (316)
T ss_pred             hhhhcccccCCCCCCcCccCCcCHHHHcCCC-CCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccC-----
Confidence                      011235688899999997754 7889999999999999999999998877666555443210000     


Q ss_pred             CCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCC----HHHHhcCcccCCC
Q psy6390         126 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN----AENALKHKYFADK  187 (197)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s----~~ell~hp~~~~~  187 (197)
                                            ......+..+.+++.+||+.||++|||    +++++.||||++.
T Consensus       252 ----------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~  295 (316)
T cd05574         252 ----------------------PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV  295 (316)
T ss_pred             ----------------------CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence                                  000125789999999999999999999    9999999999864

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.92  E-value=2.9e-24  Score=157.50  Aligned_cols=147  Identities=27%  Similarity=0.451  Sum_probs=109.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc---cccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV---RIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~---~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||+++......   .......++..|+|||.
T Consensus       101 ~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (266)
T cd06651         101 GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEV  180 (266)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHH
Confidence            4589999999999999999999         555      55678999999987543211   11122356889999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++|+||+||+++++++|..||...........+..   ....         +               ....
T Consensus       181 ~~~~~-~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~---~~~~---------~---------------~~~~  232 (266)
T cd06651         181 ISGEG-YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTN---------P---------------QLPS  232 (266)
T ss_pred             hCCCC-CCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc---CCCC---------C---------------CCch
Confidence            97644 78999999999999999999999987654443333221   1100         0               0012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      .++..+.+++ +||..+|++||+++|+++||||+
T Consensus       233 ~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         233 HISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             hcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            3567788888 67778999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.92  E-value=4e-24  Score=158.70  Aligned_cols=146  Identities=23%  Similarity=0.340  Sum_probs=116.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+......   .....++..|+|||.+.+
T Consensus        96 ~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~  172 (290)
T cd05580          96 GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---TYTLCGTPEYLAPEIILS  172 (290)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---CCCCCCCccccChhhhcC
Confidence            4689999999999999999999         555      5577899999999876543   223467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. .+.++|+||+|++++++++|..||...+.......+......                             .....+
T Consensus       173 ~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~  222 (290)
T cd05580         173 KG-YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVR-----------------------------FPSFFS  222 (290)
T ss_pred             CC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcc-----------------------------CCccCC
Confidence            44 788999999999999999999999887755555554321000                             012356


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADKT  188 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~~  188 (197)
                      ..+.+++.+||..||.+|+     +++++++||||+...
T Consensus       223 ~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         223 PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             HHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence            7899999999999999999     999999999998764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.92  E-value=4.6e-24  Score=155.96  Aligned_cols=146  Identities=24%  Similarity=0.351  Sum_probs=114.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc--------------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC--------------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAP   69 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l--------------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aP   69 (197)
                      ..+++..+..++.|+++||+||              |+|      +++.++|+|||.+..............++..|+||
T Consensus       100 ~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~p  179 (265)
T cd08217         100 KYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSP  179 (265)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccCh
Confidence            4689999999999999999987              333      55789999999998775544323445778999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      |.+.... .+.++|+||+|++++++++|..||...+.......+.....                            ...
T Consensus       180 E~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------------------~~~  230 (265)
T cd08217         180 EQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF----------------------------RRI  230 (265)
T ss_pred             hhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCC----------------------------CCC
Confidence            9997644 78899999999999999999999988764444433322100                            011


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ....+..+.+++.+||+.+|++||+++++++|||+
T Consensus       231 ~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         231 PYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            13356789999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.92  E-value=4.8e-24  Score=155.36  Aligned_cols=145  Identities=23%  Similarity=0.378  Sum_probs=112.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++..+..++.|+++||+||         |+|       ++..++|+|||.+..............++..|+|||.+.+
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~  176 (257)
T cd08225          97 LFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQN  176 (257)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcC
Confidence            478999999999999999999         555       2245699999999876554333334467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..||...+.......+....       .                     ....+..+
T Consensus       177 ~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------~---------------------~~~~~~~~  227 (257)
T cd08225         177 RP-YNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY-------F---------------------APISPNFS  227 (257)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc-------C---------------------CCCCCCCC
Confidence            54 7899999999999999999999998766544443332110       0                     00113456


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++.+||..+|++|||+.++++||||
T Consensus       228 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         228 RDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.92  E-value=2.5e-24  Score=157.61  Aligned_cols=149  Identities=23%  Similarity=0.361  Sum_probs=111.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++|++||          |+|      +++.++|+|||.+.........  ...++..|+|||.+.
T Consensus        95 ~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~y~~PE~~~  172 (265)
T cd06605          95 GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK--TFVGTSSYMAPERIQ  172 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh--cccCChhccCHHHHc
Confidence            5689999999999999999998          444      5678999999998765432211  256788999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC-----hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-----EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      +.. ++.++|+||+|++++++++|..||....     ..+....+..   ......              +         
T Consensus       173 ~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------~---------  225 (265)
T cd06605         173 GND-YSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN---EPPPRL--------------P---------  225 (265)
T ss_pred             CCC-CCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc---CCCCCC--------------C---------
Confidence            654 8899999999999999999999986542     1122222211   100000              0         


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                       ....+..+.++|.+||..||++|||+.+++.||||+...
T Consensus       226 -~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~~  264 (265)
T cd06605         226 -SGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKYE  264 (265)
T ss_pred             -hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhccc
Confidence             011577899999999999999999999999999998653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.92  E-value=4.8e-24  Score=159.49  Aligned_cols=154  Identities=26%  Similarity=0.382  Sum_probs=117.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..+..++.|++.||.||         |+|      +++.++|+|||.+......    ....++..|+|||.+.
T Consensus       109 ~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~----~~~~~~~~y~aPE~~~  184 (307)
T cd06607         109 KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA----NSFVGTPYWMAPEVIL  184 (307)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC----CCccCCccccCceeee
Confidence            34689999999999999999999         666      5577899999998755432    2335678899999885


Q ss_pred             C--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 G--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +  ...++.++|+||+|+++|++++|..||...+.......+...  .++     ...                    ..
T Consensus       185 ~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~~-----~~~--------------------~~  237 (307)
T cd06607         185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSP-----TLS--------------------SN  237 (307)
T ss_pred             ccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--CCC-----CCC--------------------ch
Confidence            3  234788999999999999999999999877665554443211  000     000                    01


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      ..+..+.+++.+||..||++||++.+++.||||......+.+
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~  279 (307)
T cd06607         238 DWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERPPTVI  279 (307)
T ss_pred             hhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCCcHHH
Confidence            245688999999999999999999999999999877655444

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.92  E-value=4.3e-24  Score=156.74  Aligned_cols=145  Identities=26%  Similarity=0.423  Sum_probs=107.0

Q ss_pred             CHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC-
Q psy6390          13 GTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS-   75 (197)
Q Consensus        13 ~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~-   75 (197)
                      ++..+..++.|++.|++||         |+|       .++.++|+|||.+..............++..|+|||.+... 
T Consensus       106 ~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  185 (268)
T cd06624         106 NEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGP  185 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhcccc
Confidence            8888999999999999999         555       34678999999987654322222334578899999998653 


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHH-HHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ-LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ..++.++|+||+|++++++++|..||........ ...... ...                          ........+
T Consensus       186 ~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~-~~~--------------------------~~~~~~~~~  238 (268)
T cd06624         186 RGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM-FKI--------------------------HPEIPESLS  238 (268)
T ss_pred             ccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh-hcc--------------------------CCCCCcccC
Confidence            2377899999999999999999999865432211 111100 000                          000113366


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .++.+++.+||+.+|++|||+++++.||||
T Consensus       239 ~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         239 AEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            789999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.92  E-value=1.5e-24  Score=159.85  Aligned_cols=153  Identities=26%  Similarity=0.309  Sum_probs=115.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.|+.||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        96 ~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (277)
T cd06642          96 GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ  175 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCc
Confidence            4589999999999999999999         666      4567899999999766543322333457888999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||+++++++|..|+...........+...       ..+                     ......+
T Consensus       176 ~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~~---------------------~~~~~~~  226 (277)
T cd06642         176 SA-YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN-------SPP---------------------TLEGQYS  226 (277)
T ss_pred             CC-CchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC-------CCC---------------------CCCcccC
Confidence            44 788999999999999999999998765443333221110       000                     0012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ..+.+++.+||+.+|++||++.++++||||+......
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~  263 (277)
T cd06642         227 KPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKT  263 (277)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhhhH
Confidence            7889999999999999999999999999998654433

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.92  E-value=4.5e-24  Score=155.93  Aligned_cols=146  Identities=23%  Similarity=0.390  Sum_probs=112.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-----CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-----KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-----~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      ..+++..+..++.|+++|++||         |+|     +++.++|+|||.+..............++..|+|||.+.+.
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  180 (260)
T cd08222         101 KTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQ  180 (260)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccC
Confidence            4689999999999999999999         566     33568999999987654433333344568889999998654


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . ++.++|+||+|++++++++|..||...........+...  ..+                          ......+.
T Consensus       181 ~-~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~--------------------------~~~~~~~~  231 (260)
T cd08222         181 G-YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG--PTP--------------------------SLPETYSR  231 (260)
T ss_pred             C-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--CCC--------------------------CCcchhcH
Confidence            4 788999999999999999999999766554444443221  000                          00123567


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ++.+++.+||..||++||+++++++||||
T Consensus       232 ~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         232 QLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            89999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.91  E-value=6.8e-24  Score=158.76  Aligned_cols=178  Identities=17%  Similarity=0.241  Sum_probs=115.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||          |+|      +++.++|+|||.+.......  .....++..|+|||.+.
T Consensus        94 ~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~aPE~~~  171 (308)
T cd06615          94 GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ  171 (308)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc--cccCCCCcCccChhHhc
Confidence            5689999999999999999999          555      55678999999987553321  22346788999999986


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCC-CCCCCCC---Ccccchhhhhh-
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK-LPDYKTT---FPEWSNFCLDK-  148 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~-  148 (197)
                      +.. ++.++|+||+||+++++++|..||...+.......+................. .......   ........... 
T Consensus       172 ~~~-~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (308)
T cd06615         172 GTH-YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEP  250 (308)
T ss_pred             CCC-CCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCC
Confidence            644 78899999999999999999999976653332222211111110000000000 0000000   00000000000 


Q ss_pred             ----ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         149 ----HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       149 ----~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                          .....+.++++++.+||..||++||+++++++||||......
T Consensus       251 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  296 (308)
T cd06615         251 PPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELE  296 (308)
T ss_pred             CccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccc
Confidence                011257789999999999999999999999999999875433

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.91  E-value=3.6e-24  Score=157.91  Aligned_cols=150  Identities=23%  Similarity=0.286  Sum_probs=112.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|+++|+.||         |+|      +++.++|+|||.+....... ......++..|+|||.+.+.
T Consensus        91 ~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~  169 (277)
T cd05577          91 GFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-KIKGRAGTPGYMAPEVLQGE  169 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC-ccccccCCCCcCCHHHhcCC
Confidence            699999999999999999999         555      55788999999987654322 22234567889999998765


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . ++.++|+||+|++++++++|..||...........+.......                         ........+.
T Consensus       170 ~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~  223 (277)
T cd05577         170 V-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM-------------------------AVEYPDKFSP  223 (277)
T ss_pred             C-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc-------------------------cccCCccCCH
Confidence            5 7889999999999999999999997654322222221110000                         0011133578


Q ss_pred             hHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         156 DGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      .+.++|.+||+.||++||     ++.+++.||||++.
T Consensus       224 ~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~  260 (277)
T cd05577         224 EAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL  260 (277)
T ss_pred             HHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence            899999999999999999     88899999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.91  E-value=1.1e-23  Score=153.46  Aligned_cols=145  Identities=20%  Similarity=0.302  Sum_probs=113.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++|++||         |+|       ++..++|+|||.+........ .....++..|+|||.+.
T Consensus        96 ~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~  174 (256)
T cd08220          96 SLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK-AYTVVGTPCYISPELCE  174 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc-ccccccCCcccCchhcc
Confidence            3489999999999999999999         444       445689999999986654322 22346788999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. .+.++|+||+|++++++++|..||...+.......+......                            ......
T Consensus       175 ~~~-~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  225 (256)
T cd08220         175 GKP-YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA----------------------------PISDRY  225 (256)
T ss_pred             CCC-CCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC----------------------------CCCCCc
Confidence            644 788999999999999999999999877665554444321100                            001235


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      +..+.+++.+||..||++|||++|+++||||
T Consensus       226 ~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         226 SPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            6789999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.91  E-value=7.6e-24  Score=154.13  Aligned_cols=146  Identities=23%  Similarity=0.395  Sum_probs=116.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        98 ~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~  177 (258)
T cd08215          98 KPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQN  177 (258)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhcc
Confidence            5699999999999999999999         555      4578899999999876554333344567889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. .+.++|+||+|++++++++|..||...+..............                            ......+
T Consensus       178 ~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  228 (258)
T cd08215         178 KP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYP----------------------------PIPSQYS  228 (258)
T ss_pred             CC-CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCC----------------------------CCCCCCC
Confidence            54 788999999999999999999999877755555444321100                            0012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++.+||..+|++|||++++++||||
T Consensus       229 ~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         229 SELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.91  E-value=3.8e-24  Score=159.07  Aligned_cols=154  Identities=26%  Similarity=0.370  Sum_probs=115.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.++..++.|++.|++||         |+|      +++.++|+|||.+..............++..|++||.+..
T Consensus       110 ~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  189 (293)
T cd06647         110 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR  189 (293)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhcc
Confidence            3588999999999999999999         555      4567899999988765443333334467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|+++|++++|..||...+.......+... +.+            .    .         .....++
T Consensus       190 ~~-~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~-~~~------------~----~---------~~~~~~~  242 (293)
T cd06647         190 KA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTP------------E----L---------QNPEKLS  242 (293)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC-CCC------------C----C---------CCccccC
Confidence            44 788999999999999999999999876544332221110 000            0    0         0112356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..+.+++.+||+.+|++||++.+++.||||+.....
T Consensus       243 ~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~  278 (293)
T cd06647         243 AIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPL  278 (293)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCccc
Confidence            789999999999999999999999999999876643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.91  E-value=7.8e-24  Score=155.08  Aligned_cols=148  Identities=25%  Similarity=0.358  Sum_probs=112.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC------ccccccceeccceeC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP------VRIYTHEVVTLWYRA   68 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~------~~~~~~~~~~~~y~a   68 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.+......      ........++..|+|
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (265)
T cd06631          97 GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMA  176 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccC
Confidence            4689999999999999999999         666      5577899999998754321      111123457889999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ||.+.+.. ++.++|+||+||+++++++|..||...+.......+.......                          ..
T Consensus       177 pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------------~~  229 (265)
T cd06631         177 PEVINESG-YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM--------------------------PR  229 (265)
T ss_pred             hhhhcCCC-CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC--------------------------CC
Confidence            99997644 7889999999999999999999998765444333322110100                          00


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .....+..+.+++++||..+|.+||+++++++||||
T Consensus       230 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         230 LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            113467889999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.91  E-value=9.7e-24  Score=153.78  Aligned_cols=145  Identities=24%  Similarity=0.415  Sum_probs=116.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|++.|++||         |+|      +++.+||+|||.+..............++..|+|||.+.+.
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~  176 (256)
T cd08221          97 LFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGV  176 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCC
Confidence            589999999999999999999         666      45678999999998665443333445678999999999765


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . .+.++|+||+|++++++++|..||......+....+......                            .....++.
T Consensus       177 ~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~  227 (256)
T cd08221         177 K-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYT----------------------------PVVSVYSS  227 (256)
T ss_pred             C-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCccccCH
Confidence            4 788999999999999999999999887766655555321000                            00133578


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .+.+++.+||..+|.+||+++++++|||+
T Consensus       228 ~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         228 ELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            89999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.91  E-value=1.1e-23  Score=156.72  Aligned_cols=154  Identities=20%  Similarity=0.262  Sum_probs=113.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++|++||          |+|      +++.++|+|||.+........ .....++..|+|||.+.
T Consensus       109 ~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~  187 (296)
T cd06618         109 GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA-KTRSAGCAAYMAPERID  187 (296)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-ccCCCCCccccCHhhcC
Confidence            4689999999999999999999          444      667899999999876543221 12235678899999986


Q ss_pred             CC---CCCCCchhhhhhhHHHHHHHhCCCCCCCCCh-HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 GS---QRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ~~---~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      ..   ..++.++|+||+|+++|++++|+.||..... .+.+..+......    ..                      ..
T Consensus       188 ~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~----~~----------------------~~  241 (296)
T cd06618         188 PPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP----SL----------------------PP  241 (296)
T ss_pred             CCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC----CC----------------------CC
Confidence            43   2367899999999999999999999976433 2333333221000    00                      00


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ....+..+.+++.+||+.||.+||+++++++||||+.....
T Consensus       242 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  282 (296)
T cd06618         242 NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETA  282 (296)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchh
Confidence            01356789999999999999999999999999999875443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PHA02988 hypothetical protein; Provisional

Probab=99.91  E-value=7.1e-24  Score=156.88  Aligned_cols=141  Identities=15%  Similarity=0.081  Sum_probs=110.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      +.+++.....++.|++.|+.||          |||      +++.+||+|||+++......   ....++..|+|||.+.
T Consensus       117 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~  193 (283)
T PHA02988        117 KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP---FKNVNFMVYFSYKMLN  193 (283)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---ccccCcccccCHHHhh
Confidence            4588999999999999999999          555      56789999999988654322   2346788999999996


Q ss_pred             CC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +. ..++.++||||+||++|++++|..||...+..+....+......+.                           ....
T Consensus       194 ~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~---------------------------~~~~  246 (283)
T PHA02988        194 DIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK---------------------------LPLD  246 (283)
T ss_pred             hccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC---------------------------CCCc
Confidence            52 3488999999999999999999999998876665555432111110                           0023


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||+.||++|||+.++++
T Consensus       247 ~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        247 CPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             CcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            5778999999999999999999999984

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.91  E-value=1e-23  Score=154.54  Aligned_cols=152  Identities=28%  Similarity=0.435  Sum_probs=111.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCcc----ccccceeccceeC
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVR----IYTHEVVTLWYRA   68 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~~~~y~a   68 (197)
                      ...+++..+..++.|++.||+||         |+|       ++..++|+|||.+........    ......++..|+|
T Consensus        97 ~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (268)
T cd06630          97 YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMA  176 (268)
T ss_pred             hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeC
Confidence            35689999999999999999999         555       334689999999876643211    1123356889999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ||.+.+.. ++.++|+||+|++++++++|..||...........+.........                        ..
T Consensus       177 PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------------~~  231 (268)
T cd06630         177 PEVLRGEQ-YGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTA------------------------PS  231 (268)
T ss_pred             HhHhccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCC------------------------CC
Confidence            99987644 788999999999999999999999755433222222211100000                        01


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      .....+..+.+++.+||..+|.+||++.++++||||+
T Consensus       232 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         232 IPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             CchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            1133678899999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.91  E-value=1.1e-23  Score=153.97  Aligned_cols=149  Identities=24%  Similarity=0.363  Sum_probs=115.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++|++||          |+|      +++.++|+|||.+..............++..|+|||.+.
T Consensus        94 ~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~  173 (264)
T cd06623          94 GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQ  173 (264)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhC
Confidence            5689999999999999999999          444      567789999999987654433333456788999999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC---hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS---EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .. .++.++|+||+|+++|++++|..||....   .......+..   ....                         ...
T Consensus       174 ~~-~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~~~~-------------------------~~~  224 (264)
T cd06623         174 GE-SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---GPPP-------------------------SLP  224 (264)
T ss_pred             CC-CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---CCCC-------------------------CCC
Confidence            65 47889999999999999999999997764   2222333221   1000                         001


Q ss_pred             CC-CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         151 KN-LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       151 ~~-~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .. ++..+.+++.+||..+|++||+++++++|||++..
T Consensus       225 ~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         225 AEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence            22 67889999999999999999999999999999865

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.91  E-value=6.4e-24  Score=156.58  Aligned_cols=151  Identities=25%  Similarity=0.366  Sum_probs=115.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|++.|++||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        96 ~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~  175 (277)
T cd06640          96 GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQ  175 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhcc
Confidence            4689999999999999999999         666      4567899999999766543322333456888999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. .+.++|+||+||++|++++|..||...........+...  .+                          .......+
T Consensus       176 ~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~  226 (277)
T cd06640         176 SA-YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN--NP--------------------------PTLTGEFS  226 (277)
T ss_pred             CC-CccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC--CC--------------------------CCCchhhh
Confidence            44 789999999999999999999999876554333222110  00                          00012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+.+++.+||+.+|++||+++++++||||.....
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  261 (277)
T cd06640         227 KPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK  261 (277)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence            78899999999999999999999999999976544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.91  E-value=4.5e-24  Score=156.53  Aligned_cols=150  Identities=25%  Similarity=0.346  Sum_probs=109.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++|++||         ++|      +++.++|+|||.+..............++..|+|||.+..
T Consensus       101 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  180 (267)
T cd06646         101 GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAV  180 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHccc
Confidence            4689999999999999999999         555      5567899999999866433222334467889999999853


Q ss_pred             --CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 --SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 --~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                        ...++.++|+||+||+++++++|..||...........+......+                  +..      .....
T Consensus       181 ~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------------------~~~------~~~~~  236 (267)
T cd06646         181 EKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQP------------------PKL------KDKTK  236 (267)
T ss_pred             ccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCC------------------CCC------ccccc
Confidence              2336789999999999999999999986544332221111100000                  000      00123


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKY  183 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~  183 (197)
                      .+..+.+++++||..+|++||+++++++|+|
T Consensus       237 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         237 WSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             cCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            5678999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.91  E-value=1.4e-23  Score=153.43  Aligned_cols=150  Identities=29%  Similarity=0.463  Sum_probs=116.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--------ccccceeccce
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--------IYTHEVVTLWY   66 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--------~~~~~~~~~~y   66 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||++........        ......++..|
T Consensus        88 ~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (265)
T cd05579          88 GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDY  167 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccc
Confidence            3689999999999999999999         555      567889999999875433211        22334567889


Q ss_pred             eCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        67 ~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      ++||...... .+.++|+||+|++++++++|..||...........+......     ++.                   
T Consensus       168 ~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~-------------------  222 (265)
T cd05579         168 IAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE-----WPE-------------------  222 (265)
T ss_pred             cCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC-----CCc-------------------
Confidence            9999997755 788999999999999999999999887766655554321000     000                   


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCH---HHHhcCcccCCC
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINA---ENALKHKYFADK  187 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~---~ell~hp~~~~~  187 (197)
                         ....+..+.+++.+||+.+|++|||+   .++++||||+++
T Consensus       223 ---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         223 ---DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             ---cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence               01146789999999999999999999   999999999865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.91  E-value=1e-23  Score=159.72  Aligned_cols=143  Identities=19%  Similarity=0.254  Sum_probs=106.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++.++..++.|+++||+||         |||+      ++.++|+|||+++.......  ......++..|+|||++
T Consensus       169 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  248 (338)
T cd05102         169 SPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI  248 (338)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHh
Confidence            4589999999999999999999         7774      46789999999976533211  11223446789999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|++++ |..||.+................+                           ....
T Consensus       249 ~~~~-~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~---------------------------~~~~  300 (338)
T cd05102         249 FDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM---------------------------RAPE  300 (338)
T ss_pred             hcCC-CCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC---------------------------CCCC
Confidence            7644 8899999999999999997 999998755433332221100000                           0013


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||+.||++|||+.++++
T Consensus       301 ~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         301 NATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            46678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0696|consensus

Probab=99.91  E-value=6.6e-24  Score=157.43  Aligned_cols=153  Identities=22%  Similarity=0.308  Sum_probs=127.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------cc------CCCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IK------PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lk------p~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++-|..+..|+.+|+-||-||         ||      ...+++||+|||.++.---......+.+||+-|+|||++.-
T Consensus       445 GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~Y  524 (683)
T KOG0696|consen  445 GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAY  524 (683)
T ss_pred             cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEe
Confidence            5688999999999999999999         33      36799999999999876555555567799999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                       .+|+.++|.||+||+||||+.|++||++.+..+..+.|.+--.                             ..+...|
T Consensus       525 -qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv-----------------------------syPKslS  574 (683)
T KOG0696|consen  525 -QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV-----------------------------SYPKSLS  574 (683)
T ss_pred             -cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC-----------------------------cCccccc
Confidence             4499999999999999999999999999999998888865211                             1125578


Q ss_pred             HhHHHHHHhhcccCCCCCCCH-----HHHhcCcccCCCCCcchh
Q psy6390         155 QDGLDLLEKTLIYCPATRINA-----ENALKHKYFADKTDLPKF  193 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~-----~ell~hp~~~~~~~~~~~  193 (197)
                      .++.++....|...|.+|+..     .+|-.||||+.+ +++++
T Consensus       575 kEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i-DWek~  617 (683)
T KOG0696|consen  575 KEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI-DWEKL  617 (683)
T ss_pred             HHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc-cHHHH
Confidence            999999999999999999954     468899999965 44443

>KOG4236|consensus

Probab=99.91  E-value=1.4e-25  Score=170.60  Aligned_cols=157  Identities=25%  Similarity=0.351  Sum_probs=124.7

Q ss_pred             HHhhhcCCHHHHHHHHHHHHhhhccc---------ccCCCCc---------EEEeecCCccccCCCccccccceecccee
Q psy6390           6 QLEWEQVGTYQVKITTRLFLQATSFC---------IKPKSNI---------VKVADFGLARAFGVPVRIYTHEVVTLWYR   67 (197)
Q Consensus         6 ~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~---------vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~   67 (197)
                      ..+..+|+|-..+.++.||+.||+||         |||+|..         +||||||.|+.++... .....+||+.|+
T Consensus       655 SsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks-FRrsVVGTPAYL  733 (888)
T KOG4236|consen  655 SSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS-FRRSVVGTPAYL  733 (888)
T ss_pred             HhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh-hhhhhcCCcccc
Confidence            34567899999999999999999999         8886643         6999999999887654 455679999999


Q ss_pred             CchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh-HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          68 APEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        68 aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      |||++...+ |...-|+||+||++|..++|..||....+ .++++.-. +  --+.+.                      
T Consensus       734 aPEVLrnkG-yNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAa-F--MyPp~P----------------------  787 (888)
T KOG4236|consen  734 APEVLRNKG-YNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAA-F--MYPPNP----------------------  787 (888)
T ss_pred             CHHHHhhcc-ccccccceeeeEEEEEEecccccCCCccchhHHhhccc-c--ccCCCc----------------------
Confidence            999998744 99999999999999999999999965532 33332210 0  001111                      


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                         +..++..++|||..+|+..-++|.|++..+.|||+++-.-+-+
T Consensus       788 ---W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~D  830 (888)
T KOG4236|consen  788 ---WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLD  830 (888)
T ss_pred             ---hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHH
Confidence               1458899999999999999999999999999999987654433

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.91  E-value=1.4e-23  Score=155.12  Aligned_cols=152  Identities=22%  Similarity=0.310  Sum_probs=112.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++..+..++.|++.|++||          |+|      +++.+||+|||.+....... ......++..|+|||.+.+
T Consensus        99 ~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~  177 (283)
T cd06617          99 TIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV-AKTIDAGCKPYMAPERINP  177 (283)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc-ccccccCCccccChhhcCC
Confidence            589999999999999999999          555      56789999999987654321 1223457888999998864


Q ss_pred             C---CCCCCchhhhhhhHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          75 S---QRYSCPVDVWSIGCIFAEIATRKPLFQGDS-EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        75 ~---~~~~~~~Diws~g~~l~~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .   ..++.++|+||+||++|++++|..||.... ..+.+......   ...    .          .          ..
T Consensus       178 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~----~----------~----------~~  230 (283)
T cd06617         178 ELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE---PSP----Q----------L----------PA  230 (283)
T ss_pred             cccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc---CCC----C----------C----------Cc
Confidence            2   236789999999999999999999997532 22233222211   000    0          0          00


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..++..+.+++.+||..+|.+||+++++++||||+.....
T Consensus       231 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  270 (283)
T cd06617         231 EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSK  270 (283)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcccc
Confidence            2257889999999999999999999999999999865433

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.91  E-value=2.5e-23  Score=150.80  Aligned_cols=146  Identities=28%  Similarity=0.451  Sum_probs=112.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++|+++|         |+|      +++.++|+|||.+........ .....++..|++||.+.+
T Consensus        93 ~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~  171 (253)
T cd05122          93 QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVING  171 (253)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-ccceecCCcccCHHHHcC
Confidence            4689999999999999999999         555      457789999999877654332 234467889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. .+.++|+||+|++++++++|..||...+........... ..+.      .                   ......+
T Consensus       172 ~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~------~-------------------~~~~~~~  224 (253)
T cd05122         172 KP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN-GPPG------L-------------------RNPEKWS  224 (253)
T ss_pred             CC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc-CCCC------c-------------------CcccccC
Confidence            55 788999999999999999999999877554444333220 0000      0                   0001136


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKY  183 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~  183 (197)
                      ..+.+++.+||+.||++|||++++++|||
T Consensus       225 ~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         225 DEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            78999999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=1.8e-23  Score=154.92  Aligned_cols=157  Identities=24%  Similarity=0.373  Sum_probs=112.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.+........  ....++..|++||.+.+
T Consensus       100 ~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~y~~pE~~~~  177 (287)
T cd06621         100 GRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA--GTFTGTSFYMAPERIQG  177 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccccc--ccccCCccccCHHHhcC
Confidence            4589999999999999999999         554      556789999999875543221  12346788999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh-----HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-----IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .. ++.++|+||+||++|++++|..||.....     .+....+...   ...    .....               ...
T Consensus       178 ~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~---------------~~~  234 (287)
T cd06621         178 KP-YSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM---PNP----ELKDE---------------PGN  234 (287)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC---Cch----hhccC---------------CCC
Confidence            44 78899999999999999999999976521     2222221110   000    00000               000


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ....+..+.+++.+||..||++|||+.|+++||||+......
T Consensus       235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~~  276 (287)
T cd06621         235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMKKK  276 (287)
T ss_pred             CCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccccch
Confidence            012356789999999999999999999999999998776653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.91  E-value=3.7e-23  Score=155.11  Aligned_cols=150  Identities=25%  Similarity=0.354  Sum_probs=115.3

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++.++..++.|++.|++||         |+|      +++.++|+|||.+.....    .....++..|+|||.+.
T Consensus       115 ~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----~~~~~~~~~y~aPE~~~  190 (313)
T cd06633         115 KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----ANSFVGTPYWMAPEVIL  190 (313)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC----CCCccccccccChhhcc
Confidence            45689999999999999999999         666      457789999999864322    12346788999999985


Q ss_pred             C--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 G--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .  ...++.++|+||+||+++++++|..||...+.......+.......                           ....
T Consensus       191 ~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  243 (313)
T cd06633         191 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPT---------------------------LQSN  243 (313)
T ss_pred             ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC---------------------------CCcc
Confidence            2  2347889999999999999999999998877666555543211000                           0002


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+..+.+++.+||+.+|++||++++++.||||+....
T Consensus       244 ~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~~  281 (313)
T cd06633         244 EWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDRP  281 (313)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCch
Confidence            24567899999999999999999999999999986543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.3e-23  Score=151.17  Aligned_cols=144  Identities=27%  Similarity=0.426  Sum_probs=114.2

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|+++|+.||         |+|      +++.++|+|||.+..............++..|++||...+.
T Consensus        89 ~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~  168 (250)
T cd05123          89 RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGK  168 (250)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCC
Confidence            589999999999999999999         666      45678999999987654432223345678899999999764


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . .+.++|+||+|++++++++|..||...+.......+...  ..                           ......+.
T Consensus       169 ~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~---------------------------~~~~~~~~  218 (250)
T cd05123         169 G-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD--PL---------------------------RFPEFLSP  218 (250)
T ss_pred             C-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC--CC---------------------------CCCCCCCH
Confidence            4 788999999999999999999999877764444444321  00                           01122467


Q ss_pred             hHHHHHHhhcccCCCCCCCH---HHHhcCccc
Q psy6390         156 DGLDLLEKTLIYCPATRINA---ENALKHKYF  184 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~---~ell~hp~~  184 (197)
                      .+.+++.+||..||++||++   ++++.||||
T Consensus       219 ~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         219 EARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             HHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            89999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.91  E-value=3.1e-23  Score=154.95  Aligned_cols=151  Identities=25%  Similarity=0.323  Sum_probs=113.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc---------------ccccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV---------------RIYTH   59 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~---------------~~~~~   59 (197)
                      ..+++..+..++.|+++|++||         |+|      +++.++|+|||.++......               .....
T Consensus        96 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (305)
T cd05609          96 GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQ  175 (305)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccC
Confidence            4689999999999999999999         666      45678999999986421100               00112


Q ss_pred             ceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCc
Q psy6390          60 EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP  139 (197)
Q Consensus        60 ~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (197)
                      ..++..|+|||.+.+.. ++.++|+||+||++|++++|..||.+....+............+.                 
T Consensus       176 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----------------  237 (305)
T cd05609         176 VCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE-----------------  237 (305)
T ss_pred             CccCccccCchhccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC-----------------
Confidence            35677899999987644 789999999999999999999999877766655554331111000                 


Q ss_pred             ccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCC---HHHHhcCcccCCC
Q psy6390         140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN---AENALKHKYFADK  187 (197)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s---~~ell~hp~~~~~  187 (197)
                               .....+..+.+++.+||+.||++||+   +.++++||||...
T Consensus       238 ---------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         238 ---------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             ---------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence                     00236788999999999999999997   7899999999654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0607|consensus

Probab=99.90  E-value=5.2e-24  Score=153.13  Aligned_cols=158  Identities=22%  Similarity=0.352  Sum_probs=115.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCCCc---------EEEeecCCccccCCC-------ccccccceecc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKSNI---------VKVADFGLARAFGVP-------VRIYTHEVVTL   64 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~---------vkl~Dfg~s~~~~~~-------~~~~~~~~~~~   64 (197)
                      +.|+|.++..++++|++||.||         +||+|..         ||||||.+.......       .-...+.+|+.
T Consensus       171 ~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSA  250 (463)
T KOG0607|consen  171 KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSA  250 (463)
T ss_pred             hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccch
Confidence            4599999999999999999999         8887754         599999987543211       11233568899


Q ss_pred             ceeCchhhc----CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH-----------HHHHHHHhhcCCCCCCCCCCCC
Q psy6390          65 WYRAPEVLL----GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI-----------DQLFRIFRVLTTPTEDNWPGVS  129 (197)
Q Consensus        65 ~y~aPE~~~----~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  129 (197)
                      .|||||++.    ....|+.++|.||+|||+|-|+.|++||.+....           ..-+.+.+.+...         
T Consensus       251 EfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEG---------  321 (463)
T KOG0607|consen  251 EFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG---------  321 (463)
T ss_pred             hhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhcc---------
Confidence            999999873    2334889999999999999999999999763211           1111122111110         


Q ss_pred             CCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         130 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                         .+.         .-++.+..+|.+++|+++.+|..++.+|.++.++++|||++...
T Consensus       322 ---kYe---------FPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  322 ---KYE---------FPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             ---CCc---------CChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence               000         11233356899999999999999999999999999999998653

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.90  E-value=1.9e-23  Score=154.45  Aligned_cols=143  Identities=17%  Similarity=0.236  Sum_probs=110.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|++.||+||         |||      +++.++|+|||.++......  .......++..|+|||.+
T Consensus       119 ~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  198 (283)
T cd05048         119 SSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAI  198 (283)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHh
Confidence            3588899999999999999999         777      44678999999987553321  112234567889999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||++|++++ |..||.+....+....+......                            ....
T Consensus       199 ~~~~-~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~----------------------------~~~~  249 (283)
T cd05048         199 LYGK-FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL----------------------------PCPE  249 (283)
T ss_pred             ccCc-CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC----------------------------CCcc
Confidence            7644 8899999999999999998 99999887776655544321100                            0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++..+.+|+.+||+.||.+||++.+++++
T Consensus       250 ~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         250 DCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            467899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0584|consensus

Probab=99.90  E-value=5.3e-24  Score=164.16  Aligned_cols=151  Identities=23%  Similarity=0.327  Sum_probs=120.9

Q ss_pred             HHhhhcCCHHHHHHHHHHHHhhhccc------------------ccCCCCcEEEeecCCccccCCCccccccceecccee
Q psy6390           6 QLEWEQVGTYQVKITTRLFLQATSFC------------------IKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYR   67 (197)
Q Consensus         6 ~~~~~~l~~~~~~~~~~qi~~~l~~l------------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~   67 (197)
                      +.++++++...++++++||++||.||                  |....+.|||+|+|+|.....+.  ....+|||.||
T Consensus       134 ~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~--aksvIGTPEFM  211 (632)
T KOG0584|consen  134 RKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH--AKSVIGTPEFM  211 (632)
T ss_pred             HHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc--cceeccCcccc
Confidence            34667899999999999999999999                  44466789999999998765432  33479999999


Q ss_pred             CchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          68 APEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        68 aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      |||.+-  ..|+..+||||||++++||.++..||..+....++++.+-....|..                       +.
T Consensus       212 APEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s-----------------------l~  266 (632)
T KOG0584|consen  212 APEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA-----------------------LS  266 (632)
T ss_pred             ChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH-----------------------hh
Confidence            999996  34899999999999999999999999988777666554332222110                       00


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                         .--..+.+++|.+||.. .+.|+|+.|+|.||||+.-
T Consensus       267 ---kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  267 ---KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             ---ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence               11357899999999999 9999999999999999864

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.90  E-value=5.1e-23  Score=150.54  Aligned_cols=149  Identities=26%  Similarity=0.408  Sum_probs=110.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc----ccceeccceeCchh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY----THEVVTLWYRAPEV   71 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~----~~~~~~~~y~aPE~   71 (197)
                      .+++..+..++.|++.|++||         |+|      +++.++|+|||.+..........    ....++..|+|||.
T Consensus        95 ~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~  174 (264)
T cd06626          95 ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV  174 (264)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhh
Confidence            488999999999999999999         554      56778999999988764432211    12456789999999


Q ss_pred             hcCCC--CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          72 LLGSQ--RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        72 ~~~~~--~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      +....  ..+.++|+||+|++++++++|+.||............... ...+               .++         .
T Consensus       175 ~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~---------------~~~---------~  229 (264)
T cd06626         175 ITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKP---------------PIP---------D  229 (264)
T ss_pred             ccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCC---------------CCC---------c
Confidence            87533  2678999999999999999999999765433222221111 1000               000         0


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ...++..+.+++.+||+.+|.+||++++++.|||+
T Consensus       230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         230 SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            12346788999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.90  E-value=3.5e-23  Score=150.82  Aligned_cols=147  Identities=27%  Similarity=0.423  Sum_probs=112.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++|++||         |+|      +++.+||+|||.+....... ......++..|++||.+..
T Consensus        97 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~  175 (258)
T cd06632          97 GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-FAKSFKGSPYWMAPEVIAQ  175 (258)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc-cccccCCCcceeCHHHhcC
Confidence            3589999999999999999999         555      55678999999987654332 2234467889999999865


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...++.++|+||+|++++++++|..||...........+......+                           .....++
T Consensus       176 ~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~  228 (258)
T cd06632         176 QGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELP---------------------------PIPDHLS  228 (258)
T ss_pred             CCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCC---------------------------CcCCCcC
Confidence            3337889999999999999999999997766444443332210000                           0113356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++++||+.+|.+||++++++.|||+
T Consensus       229 ~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         229 DEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            889999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.90  E-value=2.5e-23  Score=153.35  Aligned_cols=144  Identities=27%  Similarity=0.468  Sum_probs=113.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--------------------
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--------------------   55 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--------------------   55 (197)
                      .+++..+..++.|+++||+||         |+|      +++.++|+|||.+........                    
T Consensus        98 ~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (280)
T cd05581          98 SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR  177 (280)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCcccccccccccc
Confidence            689999999999999999999         555      557899999999876543221                    


Q ss_pred             ccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy6390          56 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK  135 (197)
Q Consensus        56 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (197)
                      ......++..|+|||.+.... .+.++|+||+|++++++++|..||...........+......                
T Consensus       178 ~~~~~~~~~~~~~Pe~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------  240 (280)
T cd05581         178 RFASFVGTAEYVSPELLNEKP-AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYS----------------  240 (280)
T ss_pred             ccccccCCccccCHHHhCCCC-CChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCC----------------
Confidence            112235678999999987644 788999999999999999999999887755555444321111                


Q ss_pred             CCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCH----HHHhcCccc
Q psy6390         136 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA----ENALKHKYF  184 (197)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~----~ell~hp~~  184 (197)
                                   .....+..+.+++.+||+.+|.+||++    +++++||||
T Consensus       241 -------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         241 -------------FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             -------------CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence                         112346789999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.90  E-value=2.6e-23  Score=153.36  Aligned_cols=152  Identities=28%  Similarity=0.364  Sum_probs=116.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.|++||         |+|      +++.++|+|||.+..............++..|+|||.+.+
T Consensus        96 ~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  175 (277)
T cd06641          96 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ  175 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhcc
Confidence            4589999999999999999999         555      5567899999998766443322333467888999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. .+.++|+||+||+++++++|..||...........+...  ..     +                     .....++
T Consensus       176 ~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~-----~---------------------~~~~~~~  226 (277)
T cd06641         176 SA-YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN--NP-----P---------------------TLEGNYS  226 (277)
T ss_pred             CC-CCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC--CC-----C---------------------CCCcccC
Confidence            44 788999999999999999999999766554444333110  00     0                     0113356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..+.+++.+||+.+|.+||+++++++||||......
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~~  262 (277)
T cd06641         227 KPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKK  262 (277)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhhc
Confidence            789999999999999999999999999999865443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.90  E-value=5e-23  Score=151.33  Aligned_cols=152  Identities=23%  Similarity=0.416  Sum_probs=112.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..++.++.|++.||.||         |+|      +++.++|+|||.+.......  .......++..|+|||.+
T Consensus       103 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  182 (272)
T cd06629         103 GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVI  182 (272)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHh
Confidence            4689999999999999999999         555      56778999999987654321  112233568899999998


Q ss_pred             cCCC-CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQ-RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~-~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .... .++.++|+||+|++++++++|..||...........+......+   ..                    ......
T Consensus       183 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~--------------------~~~~~~  239 (272)
T cd06629         183 HSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP---PI--------------------PPDVSM  239 (272)
T ss_pred             ccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCC---cC--------------------Cccccc
Confidence            7543 37889999999999999999999997655444333221100000   00                    001113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .++..+.+++.+||..+|.+||+++++++|||+
T Consensus       240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         240 NLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             cCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            467899999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.90  E-value=3.9e-23  Score=154.69  Aligned_cols=149  Identities=26%  Similarity=0.391  Sum_probs=113.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++.++..++.|++.|+.||         |+|      +++.++|+|||.+......    ....++..|+|||.+.
T Consensus       109 ~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~  184 (308)
T cd06634         109 KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NXFVGTPYWMAPEVIL  184 (308)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc----ccccCCccccCHHHHh
Confidence            44689999999999999999999         555      5577899999998755432    2335688999999985


Q ss_pred             C--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 G--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +  ....+.++|+||+||+++++++|..||...........+.......                           ....
T Consensus       185 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  237 (308)
T cd06634         185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA---------------------------LQSG  237 (308)
T ss_pred             hcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCC---------------------------cCcc
Confidence            3  2336789999999999999999999987765544444433211000                           0012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ..+..+.++|.+||+.+|++||++++++.|||+....
T Consensus       238 ~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~  274 (308)
T cd06634         238 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  274 (308)
T ss_pred             cccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence            3567889999999999999999999999999997653

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG1095|consensus

Probab=99.90  E-value=1.3e-23  Score=172.07  Aligned_cols=143  Identities=17%  Similarity=0.223  Sum_probs=114.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCC-Cccccccc-eeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGV-PVRIYTHE-VVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~-~~~~~~~~-~~~~~y~aPE~   71 (197)
                      ...++..++..++.||++|++||               +......|||+|||+|+.+-. +....... .-+..|||||.
T Consensus       796 ~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEs  875 (1025)
T KOG1095|consen  796 PSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPES  875 (1025)
T ss_pred             CCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHH
Confidence            45699999999999999999999               444668899999999994422 22222222 34689999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.... ++.++|||||||++||+++ |..||.+.++.+.+....+...-+                            .+
T Consensus       876 l~d~i-FtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~----------------------------~P  926 (1025)
T KOG1095|consen  876 LKDGI-FTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLD----------------------------PP  926 (1025)
T ss_pred             Hhhcc-cccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccC----------------------------CC
Confidence            98855 9999999999999999999 999999998888877555432111                            12


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..++..+.++|..||..+|+.||++..|++
T Consensus       927 ~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  927 SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            557889999999999999999999999886

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.90  E-value=4e-23  Score=151.38  Aligned_cols=147  Identities=24%  Similarity=0.428  Sum_probs=110.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc---cccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV---RIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~---~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.+.......   .......++..|+|||.
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (265)
T cd06652         101 GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEV  180 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhh
Confidence            4589999999999999999999         666      55778999999987653211   11223457889999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. .+.++|+||+||++|++++|..||..............   .+...                        ....
T Consensus       181 ~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~~------------------------~~~~  232 (265)
T cd06652         181 ISGEG-YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPTNP------------------------VLPP  232 (265)
T ss_pred             hcCCC-CCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCCCC------------------------CCch
Confidence            87644 78999999999999999999999987655444433321   11000                        0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      ..+..+.+++++|+. +|++||+++++++|||+.
T Consensus       233 ~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         233 HVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             hhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            356788999999995 899999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG4721|consensus

Probab=99.90  E-value=1.9e-24  Score=165.69  Aligned_cols=143  Identities=17%  Similarity=0.181  Sum_probs=110.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      +.++-.-+..+..+|+.||.||         ||..      +..|||+|||.++...... +.....||..|||||++..
T Consensus       207 ~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S-TkMSFaGTVaWMAPEvIrn  285 (904)
T KOG4721|consen  207 RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS-TKMSFAGTVAWMAPEVIRN  285 (904)
T ss_pred             CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhh-hhhhhhhhHhhhCHHHhhc
Confidence            4577788999999999999999         5554      4567999999998876553 3445689999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .+ .+.|+||||||||||||++|..||..-+....+.-+...                           ...-.....++
T Consensus       286 eP-csEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsN---------------------------sL~LpvPstcP  337 (904)
T KOG4721|consen  286 EP-CSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSN---------------------------SLHLPVPSTCP  337 (904)
T ss_pred             CC-cccccceehhHHHHHHHHhcCCCccccchheeEEeccCC---------------------------cccccCcccCc
Confidence            44 899999999999999999999999765543332211110                           00011124467


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..++-|++.||+-.|.+||++.+++.|
T Consensus       338 ~GfklL~Kqcw~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  338 DGFKLLLKQCWNSKPRNRPSFRQILLH  364 (904)
T ss_pred             hHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence            788999999999999999999999988

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.90  E-value=9.1e-24  Score=175.52  Aligned_cols=148  Identities=16%  Similarity=0.218  Sum_probs=102.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCCCCcE-------------------------EEeecCCccccCCCc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------------------------KVADFGLARAFGVPV   54 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~v-------------------------kl~Dfg~s~~~~~~~   54 (197)
                      ...+++.++..++.||++||+||         |||+|..+                         |++|||+++......
T Consensus        74 ~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~  153 (793)
T PLN00181         74 DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILS  153 (793)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccccccccc
Confidence            34599999999999999999999         88865443                         566666665321100


Q ss_pred             ----------------cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q psy6390          55 ----------------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLT  118 (197)
Q Consensus        55 ----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  118 (197)
                                      ......++|+.|||||++.+.. ++.++||||+||++|||++|..|+.....  ....+.... 
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~-  229 (793)
T PLN00181        154 ERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS-SNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRV-  229 (793)
T ss_pred             ccchhhhhccccCCCcccccccCCCcceEChhhhccCC-CCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhh-
Confidence                            0001135788899999998755 89999999999999999998887653221  111111100 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         119 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .++ .                          .........+++.+||+.||.+||++.|+++||||...
T Consensus       230 ~~~-~--------------------------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        230 LPP-Q--------------------------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             cCh-h--------------------------hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence            000 0                          00012345688999999999999999999999999764

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.90  E-value=2.9e-23  Score=151.27  Aligned_cols=143  Identities=24%  Similarity=0.322  Sum_probs=111.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++++|||.+..............++..|+|||.+.+
T Consensus        95 ~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  174 (255)
T cd08219          95 KLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWEN  174 (255)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHcc
Confidence            3589999999999999999999         666      4567899999999766544333334567889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. .+.++|+||+|++++++++|..||...+.......+......+                            .....+
T Consensus       175 ~~-~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  225 (255)
T cd08219         175 MP-YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP----------------------------LPSHYS  225 (255)
T ss_pred             CC-cCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC----------------------------CCcccC
Confidence            44 7889999999999999999999998877655554443211100                            012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+.+++.+||+.||++||++.+++.-
T Consensus       226 ~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         226 YELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            788999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.90  E-value=2.3e-23  Score=157.21  Aligned_cols=180  Identities=17%  Similarity=0.196  Sum_probs=112.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-------ccccceecccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-------IYTHEVVTLWYR   67 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-------~~~~~~~~~~y~   67 (197)
                      ..+++..+..++.|++.||+||         |||      +++.++++||+.+........       ......++..|+
T Consensus        96 ~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  175 (328)
T cd08226          96 EGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWL  175 (328)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCcc
Confidence            3589999999999999999999         777      446688999875433211100       011123456799


Q ss_pred             CchhhcCC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC--CCCCC-C----CCCCCC---
Q psy6390          68 APEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDN--WPGVS-K----LPDYKT---  136 (197)
Q Consensus        68 aPE~~~~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~----~~~~~~---  136 (197)
                      +||.+.+. ..++.++|+||+||+++++++|..||...................+...  .+... .    ......   
T Consensus       176 aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (328)
T cd08226         176 SPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIG  255 (328)
T ss_pred             ChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccc
Confidence            99999753 3378899999999999999999999987765544433332111100000  00000 0    000000   


Q ss_pred             --CCc-----ccc-hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         137 --TFP-----EWS-NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       137 --~~~-----~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                        ...     ... ...........+..+.+|+++||+.||++|||++++++||||++...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         256 ESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             cchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence              000     000 00001111335678999999999999999999999999999976543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG2345|consensus

Probab=99.90  E-value=1.5e-23  Score=145.66  Aligned_cols=147  Identities=18%  Similarity=0.194  Sum_probs=104.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-----------ccCCC------CcEEEeecCCccccCCCcc---------ccccceec
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-----------IKPKS------NIVKVADFGLARAFGVPVR---------IYTHEVVT   63 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-----------lkp~~------~~vkl~Dfg~s~~~~~~~~---------~~~~~~~~   63 (197)
                      ..++|.++..++.++.+||++|           |||.|      +.++++|||++....-...         .......|
T Consensus       122 ~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct  201 (302)
T KOG2345|consen  122 NFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCT  201 (302)
T ss_pred             CccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCC
Confidence            3599999999999999999999           78844      6789999999876532111         11234569


Q ss_pred             cceeCchhhcC--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCccc
Q psy6390          64 LWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW  141 (197)
Q Consensus        64 ~~y~aPE~~~~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (197)
                      ..|+|||++.-  ....+.++||||+||++|.++.|..||+-.-         +..+..                .+...
T Consensus       202 ~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~---------~~GgSl----------------aLAv~  256 (302)
T KOG2345|consen  202 IPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY---------QQGGSL----------------ALAVQ  256 (302)
T ss_pred             CcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh---------hcCCeE----------------EEeee
Confidence            99999999853  3347899999999999999999999986221         100000                00000


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +.+...+.....|+.+.++++.||+.||.+||++.+++.+
T Consensus       257 n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  257 NAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             ccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            0000001113378899999999999999999999999854

>KOG0614|consensus

Probab=99.90  E-value=1.8e-23  Score=158.32  Aligned_cols=149  Identities=24%  Similarity=0.435  Sum_probs=128.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..|++..++.++..+++|++||         |||      .++-+||-|||+|+.+++...+.+ .+||+.|.|||++..
T Consensus       515 g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwT-FcGTpEYVAPEIILn  593 (732)
T KOG0614|consen  515 GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWT-FCGTPEYVAPEIILN  593 (732)
T ss_pred             CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceee-ecCCcccccchhhhc
Confidence            3589999999999999999999         888      446689999999999887766554 599999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .+ .+.++|.||+|+.+||+++|.+||.+.++....+.|.+.+...                           .-+..++
T Consensus       594 KG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i---------------------------~~Pr~I~  645 (732)
T KOG0614|consen  594 KG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI---------------------------EFPRRIT  645 (732)
T ss_pred             cC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh---------------------------hcccccc
Confidence            55 7899999999999999999999999999999999987754432                           1124477


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+.+|++++-..+|++|+.     +.+|-+|.||.+.
T Consensus       646 k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf  683 (732)
T KOG0614|consen  646 KTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGF  683 (732)
T ss_pred             hhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence            89999999999999999996     8899999999743

>KOG0612|consensus

Probab=99.90  E-value=2.6e-23  Score=169.31  Aligned_cols=154  Identities=25%  Similarity=0.359  Sum_probs=125.7

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCC-CccccccceeccceeCchh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGV-PVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~-~~~~~~~~~~~~~y~aPE~   71 (197)
                      ++.+++|+.++.|+.+|+-||.-|         |||+      +|++||+|||.+-.+.. ........+|||-|.+||+
T Consensus       168 k~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEv  247 (1317)
T KOG0612|consen  168 KFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEV  247 (1317)
T ss_pred             hcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHH
Confidence            445799999999999999999887         8884      48899999999877763 4445567899999999999


Q ss_pred             hcC---C-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          72 LLG---S-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        72 ~~~---~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      +..   + ..|+..+|.||+||++|+|+.|.-||-..+-.+.+.+|+..-...                .+|        
T Consensus       248 Lqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l----------------~FP--------  303 (1317)
T KOG0612|consen  248 LQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESL----------------SFP--------  303 (1317)
T ss_pred             HHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhc----------------CCC--------
Confidence            953   2 348999999999999999999999999999888888887641111                011        


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCC---HHHHhcCcccCCC
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRIN---AENALKHKYFADK  187 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s---~~ell~hp~~~~~  187 (197)
                       ....+|.++++||.+.++. |+.|..   ++++-.||||.++
T Consensus       304 -~~~~VSeeakdLI~~ll~~-~e~RLgrngiedik~HpFF~g~  344 (1317)
T KOG0612|consen  304 -DETDVSEEAKDLIEALLCD-REVRLGRNGIEDIKNHPFFEGI  344 (1317)
T ss_pred             -cccccCHHHHHHHHHHhcC-hhhhcccccHHHHHhCccccCC
Confidence             1134889999999988765 899998   9999999999866

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.90  E-value=5e-23  Score=150.24  Aligned_cols=145  Identities=28%  Similarity=0.350  Sum_probs=112.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+....... ......++..|+|||.+..
T Consensus        95 ~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~  173 (258)
T cd05578          95 VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LTTSTSGTPGYMAPEVLCR  173 (258)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-cccccCCChhhcCHHHHcc
Confidence            3689999999999999999999         555      66788999999987665432 2234567889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH--HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI--DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .. .+.++|+||+|+++|++++|..||......  +........   ..                         ......
T Consensus       174 ~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~-------------------------~~~~~~  224 (258)
T cd05578         174 QG-YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---AD-------------------------VLYPAT  224 (258)
T ss_pred             cC-CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---cc-------------------------ccCccc
Confidence            55 789999999999999999999999876642  222111110   00                         011133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCH--HHHhcCccc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINA--ENALKHKYF  184 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~--~ell~hp~~  184 (197)
                      .+..+.++|.+||..||.+||++  .|+++||||
T Consensus       225 ~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         225 WSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             CcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            56789999999999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=9.5e-23  Score=148.17  Aligned_cols=146  Identities=28%  Similarity=0.382  Sum_probs=114.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.|+.||         |+|      +++.++|+|||.+..............++..|++||....
T Consensus        94 ~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~  173 (254)
T cd06627          94 GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEM  173 (254)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcC
Confidence            4689999999999999999999         555      4578899999999866544332334467889999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. .+.++|+|++|++++++++|..||...........+.....                            ......++
T Consensus       174 ~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~  224 (254)
T cd06627         174 SG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH----------------------------PPLPEGIS  224 (254)
T ss_pred             CC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC----------------------------CCCCCCCC
Confidence            55 78899999999999999999999987664444433321000                            00113457


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ..+.+++.+||..+|++||++.+++.||||
T Consensus       225 ~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         225 PELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            889999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG1151|consensus

Probab=99.90  E-value=1e-23  Score=157.71  Aligned_cols=153  Identities=22%  Similarity=0.404  Sum_probs=116.3

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc-----------ccCCC---------CcEEEeecCCccccCCCccc-------cccce
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC-----------IKPKS---------NIVKVADFGLARAFGVPVRI-------YTHEV   61 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l-----------lkp~~---------~~vkl~Dfg~s~~~~~~~~~-------~~~~~   61 (197)
                      ++-++|.++++|+.||++||.||           |||.|         +.+||+|||+++.+..+...       .....
T Consensus       562 hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgA  641 (775)
T KOG1151|consen  562 HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGA  641 (775)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccC
Confidence            35589999999999999999999           66643         44799999999988653321       22346


Q ss_pred             eccceeCchhhcCC---CCCCCchhhhhhhHHHHHHHhCCCCCCCCCh-HHHHHH--HHhhcCCCCCCCCCCCCCCCCCC
Q psy6390          62 VTLWYRAPEVLLGS---QRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFR--IFRVLTTPTEDNWPGVSKLPDYK  135 (197)
Q Consensus        62 ~~~~y~aPE~~~~~---~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  135 (197)
                      ||.+|++||.+.-.   +..+.++|+||+||++|+.+.|+.||..... .+.+..  |+.   .-              .
T Consensus       642 GTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk---At--------------E  704 (775)
T KOG1151|consen  642 GTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK---AT--------------E  704 (775)
T ss_pred             ceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc---ce--------------e
Confidence            89999999998532   3478899999999999999999999976543 333322  111   00              0


Q ss_pred             CCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         136 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ..++         ..+.++.++.++|++||++.-+.|..+.++..||+|.-.
T Consensus       705 VqFP---------~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh  747 (775)
T KOG1151|consen  705 VQFP---------PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH  747 (775)
T ss_pred             ccCC---------CCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence            0011         115588999999999999999999999999999999753

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.90  E-value=3.9e-23  Score=165.09  Aligned_cols=166  Identities=24%  Similarity=0.279  Sum_probs=103.4

Q ss_pred             HHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhcCCC
Q psy6390          14 TYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLLGSQ   76 (197)
Q Consensus        14 ~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~   76 (197)
                      +..+..++.|++.||+||         |||       +++.+||+|||+|+...... .......+++.|+|||.+....
T Consensus       254 ~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~  333 (566)
T PLN03225        254 NKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMST  333 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccC
Confidence            455778999999999999         777       34679999999998653321 1223457789999999764211


Q ss_pred             ---------------------CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy6390          77 ---------------------RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK  135 (197)
Q Consensus        77 ---------------------~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (197)
                                           +++.++||||+||++|+|+++..++  ......+.+.....+.... .|..... ....
T Consensus       334 ~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~  409 (566)
T PLN03225        334 QTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLV-AWRKLVE-PRAS  409 (566)
T ss_pred             CCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcHH-HHHHhhc-cccc
Confidence                                 1344679999999999999865543  3333333333222111100 0000000 0000


Q ss_pred             CCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         136 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ...     ..........+....+||.+||+.||++|||++++++||||++..
T Consensus       410 ~~~-----~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~  457 (566)
T PLN03225        410 PDL-----RRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG  457 (566)
T ss_pred             hhh-----hhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence            000     000011122345677999999999999999999999999998653

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.90  E-value=6.8e-23  Score=155.15  Aligned_cols=145  Identities=19%  Similarity=0.252  Sum_probs=108.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~   71 (197)
                      ...++...+..++.||+.||+||         |||      +++.++|+|||+++.+.....  ......++..|+|||.
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~  246 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES  246 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence            35799999999999999999999         777      446789999999986533211  1122344678999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++||||+||+++++++ |..||.+....+...........+                           ...
T Consensus       247 ~~~~~-~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~  298 (337)
T cd05054         247 IFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM---------------------------RAP  298 (337)
T ss_pred             hcCCC-CCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC---------------------------CCC
Confidence            97755 8899999999999999997 999997754433333322210000                           001


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ...+..+.+++.+||+.+|++||+++++++|
T Consensus       299 ~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         299 EYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            2356789999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG1290|consensus

Probab=99.90  E-value=5.3e-24  Score=160.11  Aligned_cols=152  Identities=30%  Similarity=0.357  Sum_probs=115.7

Q ss_pred             CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCC------CChHH
Q psy6390          35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQG------DSEID  108 (197)
Q Consensus        35 ~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~------~~~~~  108 (197)
                      ....|||+|||-|.+...   ..+..++|..|++||++.+.+ |+..+||||++|++|||.||-..|+.      ..+.+
T Consensus       389 ~di~vKIaDlGNACW~~k---hFT~DIQTRQYRapEVllGsg-Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDED  464 (590)
T KOG1290|consen  389 CDIRVKIADLGNACWVHK---HFTEDIQTRQYRAPEVLLGSG-YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDED  464 (590)
T ss_pred             cceeEEEeeccchhhhhh---hhchhhhhhhccCcceeecCC-CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHH
Confidence            446789999999987642   345678999999999999977 99999999999999999999988864      24678


Q ss_pred             HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc-------------cCCCCHhHHHHHHhhcccCCCCCCCH
Q psy6390         109 QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH-------------VKNLDQDGLDLLEKTLIYCPATRINA  175 (197)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~li~~~l~~~p~~R~s~  175 (197)
                      +++.|+++++..++..........+|..+.....+...-+-             ......++.+++.-||+.+|++|+||
T Consensus       465 HiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA  544 (590)
T KOG1290|consen  465 HIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTA  544 (590)
T ss_pred             HHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccH
Confidence            99999999999888655544444444333222221111111             12234567899999999999999999


Q ss_pred             HHHhcCcccCCCCCc
Q psy6390         176 ENALKHKYFADKTDL  190 (197)
Q Consensus       176 ~ell~hp~~~~~~~~  190 (197)
                      .+.|+|||+.....+
T Consensus       545 ~~cl~hPwLn~~~~~  559 (590)
T KOG1290|consen  545 AQCLKHPWLNPVAGP  559 (590)
T ss_pred             HHHhcCccccCCCCC
Confidence            999999999866554

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.90  E-value=1.2e-22  Score=147.93  Aligned_cols=144  Identities=24%  Similarity=0.370  Sum_probs=112.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+......  ......++..|++||.+.+
T Consensus        98 ~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~~~~Pe~~~~  175 (256)
T cd08530          98 KLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--MAKTQIGTPHYMAPEVWKG  175 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--CcccccCCccccCHHHHCC
Confidence            4589999999999999999999         666      4467899999999766544  2233467889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|+.||...+.......+......                            ......+
T Consensus       176 ~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  226 (256)
T cd08530         176 RP-YSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP----------------------------PIPPIYS  226 (256)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCchhhC
Confidence            44 788999999999999999999999887765444333211000                            0012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .++.+++.+||..+|.+||++.++++||++
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         227 QDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            789999999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.89  E-value=1e-22  Score=150.20  Aligned_cols=142  Identities=19%  Similarity=0.268  Sum_probs=108.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|++.|++||         |+|      .++.++|+|||.+........  ......++..|+|||.+
T Consensus       117 ~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  196 (280)
T cd05049         117 GELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESI  196 (280)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhh
Confidence            3588999999999999999999         666      456789999999875432211  12233457789999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||++|++++ |..||......+....+.......                            ...
T Consensus       197 ~~~~-~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~  247 (280)
T cd05049         197 MYRK-FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQ----------------------------RPR  247 (280)
T ss_pred             ccCC-cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCC----------------------------CCC
Confidence            7654 8899999999999999998 999998777666555543211110                            012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||+.||++||+++|+++
T Consensus       248 ~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         248 TCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            36688999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG1989|consensus

Probab=99.89  E-value=7.9e-24  Score=168.47  Aligned_cols=140  Identities=21%  Similarity=0.286  Sum_probs=105.2

Q ss_pred             cCCHHHHHHHHHHHHhhhccc--cc---------------CCCCcEEEeecCCccccCCCc-cc--------cccceecc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC--IK---------------PKSNIVKVADFGLARAFGVPV-RI--------YTHEVVTL   64 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l--lk---------------p~~~~vkl~Dfg~s~~~~~~~-~~--------~~~~~~~~   64 (197)
                      +|+|.++.+|++|+++|+++|  ++               ..+++.||||||.+......- ..        .-....|+
T Consensus       140 ~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp  219 (738)
T KOG1989|consen  140 RLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTP  219 (738)
T ss_pred             cCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCc
Confidence            499999999999999999999  22               266789999999986432111 10        01123489


Q ss_pred             ceeCchhhc--CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy6390          65 WYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS  142 (197)
Q Consensus        65 ~y~aPE~~~--~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (197)
                      .|++||.+.  ++.+++.|+|||+|||+||-|+....||+......++.--.                      .++.  
T Consensus       220 ~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y----------------------~~P~--  275 (738)
T KOG1989|consen  220 QYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNY----------------------SFPP--  275 (738)
T ss_pred             cccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccc----------------------cCCC--
Confidence            999999984  34558999999999999999999999998764332221111                      1111  


Q ss_pred             hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       143 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                             .+.++..+++||+.||+.||.+||++.+++.+
T Consensus       276 -------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  276 -------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             -------CccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence                   15578899999999999999999999998764

>KOG0668|consensus

Probab=99.89  E-value=2.3e-23  Score=143.64  Aligned_cols=178  Identities=29%  Similarity=0.580  Sum_probs=131.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCCC-------CcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPKS-------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+|+..+++.++.|+++||.||         +||.|       ..++|+|+|+|...-+.. .....+.+..|-.||++
T Consensus       126 y~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~-eYnVRVASRyfKGPELL  204 (338)
T KOG0668|consen  126 YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELL  204 (338)
T ss_pred             hhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCc-eeeeeeehhhcCCchhe
Confidence            34689999999999999999999         88854       456999999997654433 34456778999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCC-CCCChHHHHHHHHhhcCCCCCCCCC---CCCCCCCCC-----CCCcccch
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLF-QGDSEIDQLFRIFRVLTTPTEDNWP---GVSKLPDYK-----TTFPEWSN  143 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~  143 (197)
                      .....++..-|+||+||++..|+..+.|| .+.++.+++-++-.++|...-...-   .+.-.+.+.     .....|..
T Consensus       205 Vdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~  284 (338)
T KOG0668|consen  205 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSR  284 (338)
T ss_pred             eechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHH
Confidence            88777999999999999999999977665 6778889988888887763211000   000011111     11222333


Q ss_pred             hhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       144 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ..........+.++.||+.++|..|..+|+||.|++.||||..+
T Consensus       285 Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  285 FINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             hCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence            33333334467899999999999999999999999999999754

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.89  E-value=9.1e-23  Score=156.44  Aligned_cols=143  Identities=17%  Similarity=0.247  Sum_probs=106.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      .++++..+.+++.||++||+||         |||      ++..++|+|||+++.......  ......++..|+|||++
T Consensus       207 ~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  286 (374)
T cd05106         207 WPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI  286 (374)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHh
Confidence            3589999999999999999999         777      446689999999976543221  11122345679999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||++|++++ |..||..................+.                           ...
T Consensus       287 ~~~~-~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~---------------------------~~~  338 (374)
T cd05106         287 FDCV-YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS---------------------------RPD  338 (374)
T ss_pred             cCCC-CCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc---------------------------CCC
Confidence            7644 8999999999999999997 9999977654433333322110000                           012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+.++.+++.+||+.||++||+++++++
T Consensus       339 ~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         339 FAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            25688999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG4645|consensus

Probab=99.89  E-value=5.8e-24  Score=174.98  Aligned_cols=156  Identities=25%  Similarity=0.356  Sum_probs=123.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc----ccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~~~~y~aPE   70 (197)
                      +..+|...+.+..|++.|++||         |||      .++.+|++|||.|..+.....    ......||+.|||||
T Consensus      1329 ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPE 1408 (1509)
T KOG4645|consen 1329 RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPE 1408 (1509)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCch
Confidence            3488889999999999999999         777      557789999999987755431    223568999999999


Q ss_pred             hhcCCC--CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHH-HHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          71 VLLGSQ--RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL-FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        71 ~~~~~~--~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      ++.+..  +-..++||||+|||+.||.+|+-||...+..-.+ +++-....++                           
T Consensus      1409 vit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq--------------------------- 1461 (1509)
T KOG4645|consen 1409 VITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQ--------------------------- 1461 (1509)
T ss_pred             hhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCC---------------------------
Confidence            997643  3567899999999999999999999876655443 3333222211                           


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                       .+..+|.+.+++|.+||..||++|+++.|+++|.|-+...+.+..
T Consensus      1462 -~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~~s~ 1506 (1509)
T KOG4645|consen 1462 -IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDEDSS 1506 (1509)
T ss_pred             -CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccccchh
Confidence             113378899999999999999999999999999999877766544

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.89  E-value=1.8e-22  Score=147.34  Aligned_cols=142  Identities=18%  Similarity=0.223  Sum_probs=108.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc---cccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI---YTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~---~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|++.|++||         |+|      ++..++|+|||.+.........   .....++..|+|||.
T Consensus        90 ~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  169 (257)
T cd05116          90 KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPEC  169 (257)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhH
Confidence            4689999999999999999999         777      4456899999999866443221   112233578999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.... ++.++|+||+||++|++++ |..||......+....+......                            ...
T Consensus       170 ~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~----------------------------~~~  220 (257)
T cd05116         170 MNYYK-FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM----------------------------ECP  220 (257)
T ss_pred             hccCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC----------------------------CCC
Confidence            86544 7889999999999999997 99999887766555554321100                            011


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...+.++.++|.+||+.||++||++.+|.+
T Consensus       221 ~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         221 QRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             CCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence            346789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.89  E-value=1.7e-22  Score=147.32  Aligned_cols=143  Identities=19%  Similarity=0.239  Sum_probs=112.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+.......  .......++..|+|||.+
T Consensus       100 ~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (262)
T cd00192         100 STLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESL  179 (262)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHh
Confidence            5689999999999999999999         777      44788999999998765432  122334567899999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .... ++.++|+||+|++++++++ |..||...........+......                            ....
T Consensus       180 ~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  230 (262)
T cd00192         180 KDGI-FTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL----------------------------PKPE  230 (262)
T ss_pred             ccCC-cchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCc
Confidence            7654 8899999999999999999 69999888766666555431000                            1113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++..+.+++.+||..||++|||+++++++
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         231 YCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             cCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            357899999999999999999999999864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.89  E-value=2.7e-22  Score=150.74  Aligned_cols=149  Identities=27%  Similarity=0.379  Sum_probs=114.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++..+..++.|++.|+.||         |+|      +++.++|+|||.+......    ....++..|+|||.+.
T Consensus       119 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~  194 (317)
T cd06635         119 KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA----NSFVGTPYWMAPEVIL  194 (317)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc----ccccCCccccChhhhh
Confidence            45689999999999999999999         666      4477899999998654332    2345788899999985


Q ss_pred             C--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 G--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .  ....+.++|+||+||+++++++|..||...........+........                           ...
T Consensus       195 ~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~  247 (317)
T cd06635         195 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL---------------------------QSN  247 (317)
T ss_pred             cCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCC---------------------------CCc
Confidence            2  23478899999999999999999999987766555555433211100                           002


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ..+..+.+++.+||+.+|.+||++.++++|+|+....
T Consensus       248 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  284 (317)
T cd06635         248 EWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER  284 (317)
T ss_pred             cccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence            3567889999999999999999999999999986543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.89  E-value=2.1e-22  Score=149.30  Aligned_cols=147  Identities=18%  Similarity=0.252  Sum_probs=110.8

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccceeccceeCchhhcC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~~~   74 (197)
                      .+...+..++.|++.||+||         |||      +++.++|+|||.++........  .....++..|+|||.+.+
T Consensus       116 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  195 (288)
T cd05061         116 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD  195 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhcc
Confidence            45678899999999999999         777      4567899999998755332111  112244678999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++|+||+||+++++++ |..||.+....+....+......                            ......
T Consensus       196 ~~-~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  246 (288)
T cd05061         196 GV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL----------------------------DQPDNC  246 (288)
T ss_pred             CC-CChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCCC
Confidence            44 7899999999999999998 78899877666655444321000                            001234


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc------CcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK------HKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~------hp~~~~~  187 (197)
                      +..+.+++.+||+.||++|||+.++++      ||||+++
T Consensus       247 ~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         247 PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            678999999999999999999999987      9999876

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.89  E-value=2.3e-22  Score=146.28  Aligned_cols=147  Identities=27%  Similarity=0.445  Sum_probs=112.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.|++||         |+|      +++.++|+|||.+........  ......++..|++||.+.
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~  176 (260)
T cd06606          97 KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR  176 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhc
Confidence            689999999999999999999         555      567889999999887655432  123456788999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      ... .+.++|+||+|++++++++|..||........  .+........                        ........
T Consensus       177 ~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~------------------------~~~~~~~~  229 (260)
T cd06606         177 GEE-YGRAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGSSGE------------------------PPEIPEHL  229 (260)
T ss_pred             CCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccccCC------------------------CcCCCccc
Confidence            655 78999999999999999999999987662211  1111110000                        00111334


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      +..+.+++.+||..||.+||++.+++.||||
T Consensus       230 ~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         230 SEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             CHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            7889999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.89  E-value=2.3e-22  Score=148.46  Aligned_cols=142  Identities=18%  Similarity=0.214  Sum_probs=106.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCccc--cccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|++.||+||         |||+      ++.++|+|||+++........  .....++..|+|||.+
T Consensus       104 ~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  183 (279)
T cd05109         104 DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI  183 (279)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHh
Confidence            4589999999999999999999         7774      466899999999876432221  1122346789999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||++|++++ |..||...........+.. ...++                           ...
T Consensus       184 ~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~---------------------------~~~  234 (279)
T cd05109         184 LHRR-FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-GERLP---------------------------QPP  234 (279)
T ss_pred             ccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcCC---------------------------CCc
Confidence            7644 8899999999999999998 8999977665444333321 11100                           012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||+.||++||++.+++.
T Consensus       235 ~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         235 ICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            35678899999999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.89  E-value=3e-22  Score=147.89  Aligned_cols=143  Identities=15%  Similarity=0.174  Sum_probs=106.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~   71 (197)
                      ...+++..+..++.|++.||+||         |||      +++.+||+|||.++.......  ......++..|++||.
T Consensus       103 ~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~  182 (279)
T cd05111         103 RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALES  182 (279)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHH
Confidence            34689999999999999999999         676      456689999999986543221  1223345678999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++|+||+||++|++++ |..||.+.........+... ..+.                           ..
T Consensus       183 ~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~---------------------------~~  233 (279)
T cd05111         183 ILFGR-YTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG-ERLA---------------------------QP  233 (279)
T ss_pred             hccCC-cCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CcCC---------------------------CC
Confidence            97644 8899999999999999998 99999877654433322111 0000                           00


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...+..+.+++.+||..||++|||+.|+++
T Consensus       234 ~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         234 QICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            124567889999999999999999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.89  E-value=2.1e-22  Score=148.85  Aligned_cols=142  Identities=16%  Similarity=0.218  Sum_probs=109.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC------CcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.||+||         |||.|      ..+||+|||+++.......  ......+++.|+|||.+.
T Consensus       120 ~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05091         120 TLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM  199 (283)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHh
Confidence            488889999999999999999         77744      5689999999876533221  122334567899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+||+++++++ |..||.+....+....+......+                            ....
T Consensus       200 ~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~----------------------------~~~~  250 (283)
T cd05091         200 YGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLP----------------------------CPDD  250 (283)
T ss_pred             cCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC----------------------------CCCC
Confidence            645 7899999999999999998 888998877666655554321110                            1134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .+..+.+++.+||+.+|++||++.++++.
T Consensus       251 ~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         251 CPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             CCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            67789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.89  E-value=2.3e-22  Score=146.76  Aligned_cols=143  Identities=17%  Similarity=0.208  Sum_probs=109.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-cccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.++........ .....++..|++||.+.
T Consensus        95 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~  174 (256)
T cd05113          95 KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLL  174 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHh
Confidence            3689999999999999999999         666      4467899999998765432211 11223467899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++|+||+|+++|++++ |..||......+....+........                            ...
T Consensus       175 ~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------------~~~  225 (256)
T cd05113         175 YSK-FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYR----------------------------PHL  225 (256)
T ss_pred             cCc-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCC----------------------------CCC
Confidence            644 7889999999999999998 9999987776655555533211100                            022


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .+..+.+++.+||+.||.+||++.+++.+
T Consensus       226 ~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         226 ASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            46789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG4257|consensus

Probab=99.89  E-value=2.2e-23  Score=161.29  Aligned_cols=147  Identities=20%  Similarity=0.227  Sum_probs=117.9

Q ss_pred             hHHHhhhcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCcccccc-ceecccee
Q psy6390           4 LIQLEWEQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIYTH-EVVTLWYR   67 (197)
Q Consensus         4 ~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~-~~~~~~y~   67 (197)
                      .++-+...|+...+..|.+||..||+||               +..+..+|||+|||+|+.+..+...... ..-+..||
T Consensus       480 yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWm  559 (974)
T KOG4257|consen  480 YLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWM  559 (974)
T ss_pred             HHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeec
Confidence            3444556799999999999999999999               4447788999999999998765432222 12378999


Q ss_pred             CchhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          68 APEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        68 aPE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      |||.+.-++ ++.++|+|-|||++||++. |..||.+-.+.+.+-++...-..                           
T Consensus       560 aPESINfRr-FTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRl---------------------------  611 (974)
T KOG4257|consen  560 APESINFRR-FTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERL---------------------------  611 (974)
T ss_pred             Cccccchhc-ccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCC---------------------------
Confidence            999998756 9999999999999999988 99999998877776665432222                           


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                       +.+++++..+..|+.+||+++|.+||++.|+.
T Consensus       612 -P~P~nCPp~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  612 -PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             -CCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence             22267889999999999999999999988864

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.89  E-value=1.2e-22  Score=150.36  Aligned_cols=153  Identities=22%  Similarity=0.315  Sum_probs=110.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.|+.||          |+|      +++.++|+|||++.......  .....++..|+|||.+.
T Consensus        98 ~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--~~~~~~~~~~~aPE~~~  175 (284)
T cd06620          98 GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--ADTFVGTSTYMSPERIQ  175 (284)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--cCccccCcccCCHHHHc
Confidence            4589999999999999999998          445      55778999999986543221  12346789999999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHH--------HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhh
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEID--------QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC  145 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (197)
                      +. .++.++|+||+||+++++++|..||.......        ..............    .          .+      
T Consensus       176 ~~-~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----------~~------  234 (284)
T cd06620         176 GG-KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP----R----------LP------  234 (284)
T ss_pred             cC-CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC----C----------CC------
Confidence            64 47889999999999999999999998654321        01111110000000    0          00      


Q ss_pred             hhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       146 ~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                          ...++..+.+++.+||+.||++|||++|+++||||.+-..
T Consensus       235 ----~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~  274 (284)
T cd06620         235 ----SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR  274 (284)
T ss_pred             ----chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence                0125578899999999999999999999999999965433

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.89  E-value=2.4e-22  Score=148.99  Aligned_cols=141  Identities=18%  Similarity=0.271  Sum_probs=108.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.||+||         |||      +++.++|+|||.++.......  ......++..|+|||.+.
T Consensus       116 ~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  195 (288)
T cd05093         116 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  195 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhc
Confidence            489999999999999999999         777      456789999999976533221  112234467899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+||++++|++ |..||......+....+.......                            ....
T Consensus       196 ~~~-~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~----------------------------~~~~  246 (288)
T cd05093         196 YRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQ----------------------------RPRT  246 (288)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCC----------------------------CCCC
Confidence            644 7899999999999999998 899998877666555553311000                            0123


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||+.||.+|||+.++++
T Consensus       247 ~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         247 CPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            5678999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.89  E-value=1.6e-22  Score=148.11  Aligned_cols=138  Identities=18%  Similarity=0.177  Sum_probs=102.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCCCc-------------EEEeecCCccccCCCccccccceecccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKSNI-------------VKVADFGLARAFGVPVRIYTHEVVTLWYR   67 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~-------------vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~   67 (197)
                      ..+++..+..++.||++||+||         |+|+|..             ++++|||.+......    ....++..|+
T Consensus       100 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~----~~~~~~~~y~  175 (262)
T cd05077         100 DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR----QECVERIPWI  175 (262)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc----cccccccccc
Confidence            4589999999999999999999         7774422             689999998655322    2345678899


Q ss_pred             CchhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          68 APEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        68 aPE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      |||.+.....++.++||||+||++|++++ |..|+......+..... .   ...                         
T Consensus       176 aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~-~---~~~-------------------------  226 (262)
T cd05077         176 APECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFY-E---GQC-------------------------  226 (262)
T ss_pred             ChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHH-h---cCc-------------------------
Confidence            99998755558899999999999999984 88888765433222111 1   000                         


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                       ......+..+.+++.+||+.||.+||++.+|+++
T Consensus       227 -~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         227 -MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             -cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence             0001134678899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.89  E-value=2.6e-22  Score=149.87  Aligned_cols=147  Identities=14%  Similarity=0.159  Sum_probs=105.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .++...+.+++.||+.||+||         |||+      ++.+||+|||.++.......  ......++..|+|||.+.
T Consensus       134 ~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  213 (304)
T cd05096         134 AISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL  213 (304)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh
Confidence            467788999999999999999         7774      46789999999976533221  112234477899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh--CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT--RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      ... ++.++|+||+||++|++++  +..||...........+............                     ....+
T Consensus       214 ~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~  271 (304)
T cd05096         214 MGK-FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVY---------------------LFRPP  271 (304)
T ss_pred             cCC-CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhcccccc---------------------ccCCC
Confidence            644 8899999999999999987  56788776655555443332111100000                     00113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                      .++..+.+++.+||+.||++|||++++.
T Consensus       272 ~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         272 PCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             CCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            4678899999999999999999999995

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.89  E-value=2.7e-22  Score=147.12  Aligned_cols=143  Identities=14%  Similarity=0.094  Sum_probs=107.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-cccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y~aPE~~   72 (197)
                      ...+++..+..++.|++.||+||         |+|      +++.++++|||.+......... .....++..|+|||.+
T Consensus       101 ~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~  180 (266)
T cd05064         101 EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAI  180 (266)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHH
Confidence            34689999999999999999999         666      4567899999987654322111 1122345789999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||++|++++ |..||......+....+......+                            ...
T Consensus       181 ~~~~-~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~  231 (266)
T cd05064         181 QYHH-FSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLP----------------------------APR  231 (266)
T ss_pred             hhCC-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC----------------------------CCC
Confidence            7644 8899999999999999775 999998877766655553321110                            113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .++..+.+++.+||+.+|++||+++++++
T Consensus       232 ~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         232 NCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             CCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            35678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.89  E-value=2.7e-22  Score=146.42  Aligned_cols=144  Identities=17%  Similarity=0.199  Sum_probs=108.4

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccCCC------CcEEEeecCCccccCCCccc---cccceeccceeCc
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRI---YTHEVVTLWYRAP   69 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~~~~~---~~~~~~~~~y~aP   69 (197)
                      ....+++..+..++.|++.||+||         |+|+|      ..++|+|||.+.........   .....++..|+||
T Consensus        88 ~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  167 (257)
T cd05115          88 KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAP  167 (257)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCH
Confidence            344689999999999999999999         77744      56899999999755432211   1112235689999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      |.+.... ++.++|+||+||++|++++ |..||......+....+......                            .
T Consensus       168 E~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~  218 (257)
T cd05115         168 ECINFRK-FSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL----------------------------D  218 (257)
T ss_pred             HHHccCC-CCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC----------------------------C
Confidence            9987644 7889999999999999996 99999887766655444321110                            0


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .....+.++.+++.+||..||++||++.++.+
T Consensus       219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            11335788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.89  E-value=2.7e-22  Score=147.39  Aligned_cols=142  Identities=19%  Similarity=0.148  Sum_probs=107.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|+++||+||         |||      +++.++|+|||.++........  .....++..|++||...
T Consensus       108 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  187 (272)
T cd05075         108 YLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLA  187 (272)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHcc
Confidence            478999999999999999999         677      4566899999999876433211  12224567899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+||++|++++ |..||.+.........+......                            .....
T Consensus       188 ~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  238 (272)
T cd05075         188 DRV-YTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL----------------------------KQPPD  238 (272)
T ss_pred             CCC-cChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCC
Confidence            644 8899999999999999999 88999876665544443321000                            00133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .+..+.+++.+||+.||++|||+++++++
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         239 CLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            56788999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.89  E-value=3.2e-22  Score=153.53  Aligned_cols=144  Identities=18%  Similarity=0.264  Sum_probs=106.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCccc--cccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.||++||+||         |||+      +..++|+|||+++........  .....++..|+|||.+
T Consensus       209 ~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  288 (375)
T cd05104         209 LALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESI  288 (375)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHh
Confidence            4589999999999999999999         7774      456799999999865432211  1122345679999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||++|++++ |..||..................+                           ....
T Consensus       289 ~~~~-~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  340 (375)
T cd05104         289 FNCV-YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM---------------------------LSPE  340 (375)
T ss_pred             cCCC-CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC---------------------------CCCC
Confidence            7754 8899999999999999998 889997765444433332210000                           0012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+.++.+++.+||+.||++||++.++++.
T Consensus       341 ~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         341 CAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            246789999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0193|consensus

Probab=99.88  E-value=3.9e-23  Score=159.01  Aligned_cols=149  Identities=20%  Similarity=0.209  Sum_probs=111.9

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCC--CccccccceeccceeCch
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGV--PVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~--~~~~~~~~~~~~~y~aPE   70 (197)
                      ..-+|....++.|++||++||.||         ||.      +++.|||+|||++..-..  .........+...|||||
T Consensus       481 ~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPE  560 (678)
T KOG0193|consen  481 QETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPE  560 (678)
T ss_pred             hhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHH
Confidence            334689999999999999999999         444      337899999999865432  222234456789999999


Q ss_pred             hhcC--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          71 VLLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        71 ~~~~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ++..  ..+|+..+||||||+|+|||++|..||........+..+.+....+.                        ...
T Consensus       561 vIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd------------------------~s~  616 (678)
T KOG0193|consen  561 VIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD------------------------LSK  616 (678)
T ss_pred             HHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc------------------------chh
Confidence            9863  34589999999999999999999999995555544443333211111                        112


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...+.++++++|+..||..++++||.+.+|+.
T Consensus       617 ~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  617 IRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             hhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            22556779999999999999999999999875

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.88  E-value=3.9e-22  Score=148.08  Aligned_cols=141  Identities=20%  Similarity=0.289  Sum_probs=107.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.|++||         |+|      +++.++|+|||.+........  ......++..|+|||.+.
T Consensus       119 ~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  198 (291)
T cd05094         119 ELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  198 (291)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhc
Confidence            488999999999999999999         777      446789999999976543221  122345678899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+||++|+|++ |..||...........+......                            .....
T Consensus       199 ~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  249 (291)
T cd05094         199 YRK-FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVL----------------------------ERPRV  249 (291)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCC----------------------------CCCcc
Confidence            644 7889999999999999998 99999877666555443221000                            00123


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||+.||++||++.++++
T Consensus       250 ~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         250 CPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            5678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.88  E-value=3.5e-22  Score=147.35  Aligned_cols=142  Identities=18%  Similarity=0.258  Sum_probs=106.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccc--cccceeccceeCch
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPE   70 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE   70 (197)
                      .+++..+..++.||+.|++||         |+|+|         ..++|+|||.++........  ......+..|+|||
T Consensus       112 ~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  191 (277)
T cd05036         112 SLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPE  191 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHH
Confidence            489999999999999999999         66633         35799999999865322111  11223356899999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .+.+.. ++.++||||+||++|++++ |..||...........+......                            ..
T Consensus       192 ~~~~~~-~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~----------------------------~~  242 (277)
T cd05036         192 AFLDGI-FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL----------------------------DP  242 (277)
T ss_pred             HHhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC----------------------------CC
Confidence            997655 8999999999999999997 99999887665544433221000                            00


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ...++..+.+++.+||+.+|++||++.++++|
T Consensus       243 ~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         243 PKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            13356789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.88  E-value=5e-22  Score=145.43  Aligned_cols=141  Identities=20%  Similarity=0.270  Sum_probs=107.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc-ccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY-THEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~-~~~~~~~~y~aPE~~~~   74 (197)
                      .+++..+..++.|+++||+||         |+|      +++.++|+|||.+.......... .....+..|+|||.+.+
T Consensus       100 ~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  179 (263)
T cd05052         100 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY  179 (263)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhcc
Confidence            588999999999999999999         777      44678999999987654432111 11223567999998876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++|+||+||++|++++ |..||.+.+..+....+......                            ......
T Consensus       180 ~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  230 (263)
T cd05052         180 NK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRM----------------------------ERPEGC  230 (263)
T ss_pred             CC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC----------------------------CCCCCC
Confidence            44 7889999999999999998 99999887665554444321100                            011336


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      +..+.+++.+||+.||++||++.++++
T Consensus       231 ~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         231 PPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.88  E-value=3.8e-22  Score=149.81  Aligned_cols=143  Identities=17%  Similarity=0.205  Sum_probs=107.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~   72 (197)
                      ..++...+..++.|++.||+||         |||      +++.+||+|||+++........  ......+..|++||.+
T Consensus       104 ~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~  183 (316)
T cd05108         104 DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESI  183 (316)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHh
Confidence            3588899999999999999999         777      4467899999999876543221  1122346789999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||++|++++ |..||.+....+....+.. ....+                           ...
T Consensus       184 ~~~~-~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~---------------------------~~~  234 (316)
T cd05108         184 LHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-GERLP---------------------------QPP  234 (316)
T ss_pred             ccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhC-CCCCC---------------------------CCC
Confidence            7644 8899999999999999987 9999987765543332211 10000                           012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+..+.+++.+||..||.+||++.+++.+
T Consensus       235 ~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         235 ICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            355688999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0586|consensus

Probab=99.88  E-value=2e-23  Score=160.71  Aligned_cols=152  Identities=22%  Similarity=0.355  Sum_probs=123.4

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      +.+..+..++.++.|+.+|++||         ||.      .+.++||+|||++..+... ....+.+|++.|.|||++.
T Consensus       149 ~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~-~~lqt~cgsppyAaPEl~~  227 (596)
T KOG0586|consen  149 HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG-LMLQTFCGSPPYAAPELFN  227 (596)
T ss_pred             cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc-ccccccCCCCCccChHhhc
Confidence            34577899999999999999999         333      6677999999999887633 3455679999999999999


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +....++.+|+||+|+++|.++.|..||++.+-.....+.....-                             ...-.+
T Consensus       228 g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~-----------------------------rIp~~m  278 (596)
T KOG0586|consen  228 GKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY-----------------------------RIPFYM  278 (596)
T ss_pred             CcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee-----------------------------ccccee
Confidence            877678999999999999999999999998765544444332111                             111337


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      +.+++++|+++|..+|.+|++.+++..|.|.......
T Consensus       279 s~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  279 SCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             echhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence            7899999999999999999999999999998766544

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.88  E-value=5.2e-22  Score=144.78  Aligned_cols=141  Identities=21%  Similarity=0.232  Sum_probs=108.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-cccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++..++.++.|+++||+||         |+|      +++.++|+|||.++........ .....++..|+|||.+..
T Consensus        96 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (256)
T cd05114          96 KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNF  175 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhccc
Confidence            589999999999999999999         666      4567899999998765432221 112234568999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++|+||+|+++|++++ |+.||...+..+....+.......                            .....
T Consensus       176 ~~-~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~----------------------------~~~~~  226 (256)
T cd05114         176 SK-YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY----------------------------RPKLA  226 (256)
T ss_pred             Cc-cchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC----------------------------CCCCC
Confidence            44 7899999999999999999 899998887776666654321100                            00124


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      +..+.+++.+||+.+|++||+++++++
T Consensus       227 ~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         227 SMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            567899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0196|consensus

Probab=99.88  E-value=1.6e-23  Score=165.22  Aligned_cols=151  Identities=17%  Similarity=0.188  Sum_probs=129.7

Q ss_pred             ChhhHHHhhhcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCcccccccee---
Q psy6390           1 FCNLIQLEWEQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIYTHEVV---   62 (197)
Q Consensus         1 ~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~---   62 (197)
                      ++.|+|.+...|+..++..+++-|++||+||               |...|..+|++|||+|+.+.++........|   
T Consensus       717 LDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKI  796 (996)
T KOG0196|consen  717 LDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKI  796 (996)
T ss_pred             HHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCcc
Confidence            3678999998999999999999999999999               5668888999999999988654422222222   


Q ss_pred             ccceeCchhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCccc
Q psy6390          63 TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW  141 (197)
Q Consensus        63 ~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (197)
                      +.+|.|||.+..++ ++.++|+||+|+++||+++ |.-||-..++.+.+..+.+....|++                   
T Consensus       797 PiRWTAPEAIa~RK-FTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP-------------------  856 (996)
T KOG0196|consen  797 PIRWTAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP-------------------  856 (996)
T ss_pred             ceeecChhHhhhcc-cCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC-------------------
Confidence            78999999998866 9999999999999999887 99999999999999999887666554                   


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                               ..++..+.+|+..||++|-..||++++|+.
T Consensus       857 ---------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  857 ---------MDCPAALYQLMLDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             ---------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence                     557889999999999999999999999875

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=4.4e-22  Score=145.22  Aligned_cols=141  Identities=17%  Similarity=0.231  Sum_probs=107.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccc---cceeccceeCchhh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYT---HEVVTLWYRAPEVL   72 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~---~~~~~~~y~aPE~~   72 (197)
                      .+++..+..++.|++.|++||         |+|      .++.++|+|||.++..........   ...++..|+|||.+
T Consensus        91 ~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  170 (257)
T cd05060          91 EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECI  170 (257)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHh
Confidence            589999999999999999999         777      446689999999986644332211   11234679999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+|+++|++++ |..||...+..+....+......                            ....
T Consensus       171 ~~~~-~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  221 (257)
T cd05060         171 NYGK-FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL----------------------------PRPE  221 (257)
T ss_pred             cCCC-CCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC----------------------------CCCC
Confidence            7644 8899999999999999997 99999877765555444321100                            0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .++..+.+++.+||..+|++||++.++++
T Consensus       222 ~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         222 ECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            35678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.88  E-value=4.1e-22  Score=147.71  Aligned_cols=154  Identities=25%  Similarity=0.331  Sum_probs=110.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.|+++||+||         |+|      .++.++|+|||.++....... ......++..|++||.+.
T Consensus       100 ~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  179 (288)
T cd05583         100 EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIR  179 (288)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhc
Confidence            4588999999999999999999         555      557789999999876543321 122335788999999986


Q ss_pred             CCC-CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQ-RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~-~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ..+.++|+||+|++++++++|..||...........+........                         ......
T Consensus       180 ~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~  234 (288)
T cd05583         180 GGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK-------------------------PPFPKT  234 (288)
T ss_pred             CCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC-------------------------CCCCcc
Confidence            533 367889999999999999999999864332211111111100000                         001133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCC---HHHHhcCcccCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRIN---AENALKHKYFADKT  188 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s---~~ell~hp~~~~~~  188 (197)
                      .+..+.+++.+||+.||++|||   +.++++||||+.+.
T Consensus       235 ~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~  273 (288)
T cd05583         235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID  273 (288)
T ss_pred             cCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence            5678899999999999999998   56789999999874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.88  E-value=5e-22  Score=147.95  Aligned_cols=141  Identities=21%  Similarity=0.236  Sum_probs=106.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..++.++.|++.||+||         |||+      +..+||+|||++........ ......+..|+|||.+...
T Consensus       115 ~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~  193 (297)
T cd05089         115 TLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVK-KTMGRLPVRWMAIESLNYS  193 (297)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccceec-cCCCCcCccccCchhhccC
Confidence            488999999999999999999         7774      45679999999864322111 1112235579999998764


Q ss_pred             CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      . ++.++|+||+||++|+|++ |..||...........+......                            .....++
T Consensus       194 ~-~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  244 (297)
T cd05089         194 V-YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRM----------------------------EKPRNCD  244 (297)
T ss_pred             C-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCCCCCC
Confidence            4 7899999999999999997 99999887766655544321110                            0113367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+.+++.+||+.+|.+||+++++++.
T Consensus       245 ~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         245 DEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            889999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.88  E-value=5.8e-22  Score=144.81  Aligned_cols=142  Identities=19%  Similarity=0.247  Sum_probs=109.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++|++||         |+|      +++.++|+|||.+..............++..|++||.+..
T Consensus        99 ~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~  178 (261)
T cd05148          99 QVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASH  178 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHcc
Confidence            4589999999999999999999         666      4567899999999766443322333345678999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++|+||+|++++++++ |..||...........+......+                            .....
T Consensus       179 ~~-~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  229 (261)
T cd05148         179 GT-FSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMP----------------------------CPAKC  229 (261)
T ss_pred             CC-CCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCC----------------------------CCCCC
Confidence            44 7889999999999999998 899998877666655544211110                            01335


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      +..+.+++.+||..||++|||+.++++
T Consensus       230 ~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         230 PQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.88  E-value=8.5e-23  Score=147.41  Aligned_cols=138  Identities=23%  Similarity=0.266  Sum_probs=104.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |||      .++.++++|||.+.......   ....++..|+|||.+..
T Consensus        80 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~y~aPE~~~~  156 (237)
T cd05576          80 LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---DGEAVENMYCAPEVGGI  156 (237)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc---ccCCcCccccCCcccCC
Confidence            4589999999999999999999         666      55778999999876554321   22345678999999865


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..++......     +.               ...  ..           .....++
T Consensus       157 ~~-~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~---------------~~~--~~-----------~~~~~~~  202 (237)
T cd05576         157 SE-ETEACDWWSLGAILFELLTGKTLVECHPSG-----IN---------------THT--TL-----------NIPEWVS  202 (237)
T ss_pred             CC-CCchhhHHHHHHHHHHHHHCcchhhcCchh-----cc---------------ccc--cc-----------CCcccCC
Confidence            44 788999999999999999998776432110     00               000  00           0113367


Q ss_pred             HhHHHHHHhhcccCCCCCCCH-----HHHhcCccc
Q psy6390         155 QDGLDLLEKTLIYCPATRINA-----ENALKHKYF  184 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~-----~ell~hp~~  184 (197)
                      ..+.+++.+||+.||++|+++     ++++.||||
T Consensus       203 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         203 EEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            889999999999999999986     899999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.88  E-value=5.8e-22  Score=144.87  Aligned_cols=142  Identities=20%  Similarity=0.251  Sum_probs=108.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-cccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+......... .....++..|+|||.+.
T Consensus        98 ~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  177 (261)
T cd05072          98 GKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN  177 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhc
Confidence            4588899999999999999999         677      4467899999999866432211 12233467899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++|+||+||++|++++ |..||...........+......                            .....
T Consensus       178 ~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  228 (261)
T cd05072         178 FGS-FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM----------------------------PRMEN  228 (261)
T ss_pred             cCC-CChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCC
Confidence            644 7889999999999999998 99999887766655554321110                            01133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||..+|++||+++++.+
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         229 CPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             CCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            5678999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.88  E-value=4.2e-22  Score=146.37  Aligned_cols=142  Identities=18%  Similarity=0.130  Sum_probs=108.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..++.++.|++.||+||         |||      +++.++|+|||.++........  ......+..|+|||.+.
T Consensus       109 ~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  188 (273)
T cd05035         109 KLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA  188 (273)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcc
Confidence            589999999999999999999         777      4467899999999865433211  11123467899999986


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++|+||+||++|++++ |..||.+....+....+......                            .....
T Consensus       189 ~~~-~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  239 (273)
T cd05035         189 DRV-YTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRL----------------------------KQPED  239 (273)
T ss_pred             cCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCcC
Confidence            544 7899999999999999999 88999887766655444321100                            01133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .+..+.+++.+||+.||.+|||+.+++++
T Consensus       240 ~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         240 CLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            66789999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.88  E-value=4.4e-22  Score=148.09  Aligned_cols=146  Identities=18%  Similarity=0.168  Sum_probs=105.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-------cccccceeccceeC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-------RIYTHEVVTLWYRA   68 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-------~~~~~~~~~~~y~a   68 (197)
                      ..++..+..++.|+++||+||         |||      +++.++|+|||+|+......       .......||+.|+|
T Consensus       122 ~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a  201 (294)
T PHA02882        122 CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAG  201 (294)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccC
Confidence            367888999999999999999         777      34668999999997653211       11123468999999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHH-H-HhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFR-I-FRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      ||+..+.. ++.++||||+||+++++++|..||.+......... . .........                       .
T Consensus       202 pe~~~~~~-~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~  257 (294)
T PHA02882        202 LDAHNGAC-VTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHE-----------------------G  257 (294)
T ss_pred             HHHhCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhh-----------------------h
Confidence            99987644 89999999999999999999999987632222111 1 000000000                       0


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ....+..+..+.+++..|+..+|++||+.+++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        258 KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            0011345678999999999999999999999874

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.88  E-value=5.2e-22  Score=145.55  Aligned_cols=143  Identities=16%  Similarity=0.195  Sum_probs=108.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|++.|++||         |+|      +++.++|+|||.++.......  ......++..|+|||.+
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~  180 (266)
T cd05033         101 GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAI  180 (266)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhh
Confidence            4689999999999999999999         666      456789999999987642111  11122345789999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+|++++++++ |..||...........+......+.                            ..
T Consensus       181 ~~~~-~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------------~~  231 (266)
T cd05033         181 AYRK-FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPP----------------------------PM  231 (266)
T ss_pred             ccCC-CccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------CC
Confidence            7644 7899999999999999997 9999987776655555433211110                            02


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+..+.+++.+||+.+|++||++++++++
T Consensus       232 ~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         232 DCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.88  E-value=4.9e-22  Score=146.51  Aligned_cols=141  Identities=19%  Similarity=0.238  Sum_probs=105.8

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccceeccceeCchhhcC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~~~   74 (197)
                      ++...+..++.|+++||+||         |||      +++.++|+|||.++........  .....++..|+|||.+.+
T Consensus       116 ~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05062         116 PSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  195 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc
Confidence            56778999999999999999         666      4567899999998755332211  112344678999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++|+||+||++|++++ |..||.+.........+.......                            .....
T Consensus       196 ~~-~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  246 (277)
T cd05062         196 GV-FTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLD----------------------------KPDNC  246 (277)
T ss_pred             CC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC----------------------------CCCCC
Confidence            44 8899999999999999998 788998776655554443211000                            01235


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +..+.+++.+||+.||++|||+.|++++
T Consensus       247 ~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         247 PDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            6789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG1006|consensus

Probab=99.88  E-value=1.7e-23  Score=147.00  Aligned_cols=155  Identities=20%  Similarity=0.232  Sum_probs=119.0

Q ss_pred             HhhhcCCHHHHHHHHHHHHhhhccc----------ccCCC------CcEEEeecCCccccCCCccccccceeccceeCch
Q psy6390           7 LEWEQVGTYQVKITTRLFLQATSFC----------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus         7 ~~~~~l~~~~~~~~~~qi~~~l~~l----------lkp~~------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      .+..+++|.-+..+....+.||.||          +||+|      +.|||||||++..+..+ ...+...|...|||||
T Consensus       159 vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S-iAkT~daGCrpYmAPE  237 (361)
T KOG1006|consen  159 VQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS-IAKTVDAGCRPYMAPE  237 (361)
T ss_pred             HHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH-HHhhhccCCccccChh
Confidence            3456799999999999999999999          88855      67899999999876443 2334568899999999


Q ss_pred             hhcCCC-CCCCchhhhhhhHHHHHHHhCCCCCCCCCh-HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          71 VLLGSQ-RYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        71 ~~~~~~-~~~~~~Diws~g~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      .+.... .++-++|+||+|++++|+.+|..||.+++. .+++..+..   ..++    .+...                .
T Consensus       238 Ri~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~---gdpp----~l~~~----------------~  294 (361)
T KOG1006|consen  238 RIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI---GDPP----ILLFD----------------K  294 (361)
T ss_pred             ccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc---CCCC----eecCc----------------c
Confidence            997543 388999999999999999999999998865 233333332   2111    11000                0


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      .-...+..+..+|..||.+|-+.||+..+++++||++
T Consensus       295 ~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr  331 (361)
T KOG1006|consen  295 ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYR  331 (361)
T ss_pred             cccccCHHHHHHHHHHhhcccccCcchhhhhcCchhh
Confidence            0133678899999999999999999999999999986

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.88  E-value=2.3e-22  Score=147.02  Aligned_cols=142  Identities=25%  Similarity=0.328  Sum_probs=107.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC--ccccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~--~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..++...+..++.|+++||+||         |.+      +++.+||+|||.+......  ............|+|||.+
T Consensus        98 ~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~  177 (259)
T PF07714_consen   98 EPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVL  177 (259)
T ss_dssp             TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4699999999999999999999         333      6788999999999876322  1222344567899999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .... ++.++||||||+++|++++ |..||......+....+.......                            ...
T Consensus       178 ~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~  228 (259)
T PF07714_consen  178 KDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP----------------------------IPD  228 (259)
T ss_dssp             HHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT----------------------------SBT
T ss_pred             cccc-ccccccccccccccccccccccccccccccccccccccccccce----------------------------ecc
Confidence            7755 7899999999999999999 789998887777666664321111                            113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||..||++||++.++++
T Consensus       229 ~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  229 NCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             TSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             chhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            46788999999999999999999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.88  E-value=3.6e-22  Score=148.31  Aligned_cols=143  Identities=21%  Similarity=0.282  Sum_probs=108.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.++........  .....++..|+|||.+
T Consensus       127 ~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  206 (293)
T cd05053         127 ETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEAL  206 (293)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHh
Confidence            4689999999999999999999         666      5567899999999865432211  1112335679999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||++|++++ |..||.+....+....+......                            ....
T Consensus       207 ~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  257 (293)
T cd05053         207 FDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRM----------------------------EKPQ  257 (293)
T ss_pred             ccCC-cCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC----------------------------CCCC
Confidence            6644 7899999999999999997 99999877766555544321100                            0012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+..+.+|+.+||..||++|||+++++++
T Consensus       258 ~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         258 NCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             CCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.88  E-value=4.2e-22  Score=145.48  Aligned_cols=138  Identities=15%  Similarity=0.137  Sum_probs=102.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCCCc--------------EEEeecCCccccCCCccccccceeccce
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKSNI--------------VKVADFGLARAFGVPVRIYTHEVVTLWY   66 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~--------------vkl~Dfg~s~~~~~~~~~~~~~~~~~~y   66 (197)
                      ..+++..+..++.||+.||+||         |||+|..              ++++|||.+......    ....++..|
T Consensus        95 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~----~~~~~~~~y  170 (258)
T cd05078          95 NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK----EILLERIPW  170 (258)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCc----hhccccCCc
Confidence            3589999999999999999999         7774422              589999998655432    123567889


Q ss_pred             eCchhhcCCCCCCCchhhhhhhHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhh
Q psy6390          67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC  145 (197)
Q Consensus        67 ~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (197)
                      +|||.+.+...++.++|+||+|+++|++++| ..|+...+........... .                           
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~-~---------------------------  222 (258)
T cd05078         171 VPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDR-H---------------------------  222 (258)
T ss_pred             cCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHcc-c---------------------------
Confidence            9999997655578899999999999999998 4666655544333222110 0                           


Q ss_pred             hhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       146 ~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                        ......+.++.+++.+||+.||++|||++++++.
T Consensus       223 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         223 --QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             --cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence              0012244678999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.88  E-value=6e-22  Score=144.48  Aligned_cols=143  Identities=21%  Similarity=0.212  Sum_probs=107.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-cccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.|++||         |+|      +++.++|+|||.++........ .....++..|+|||.+.
T Consensus        95 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~  174 (256)
T cd05059          95 GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFD  174 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhc
Confidence            3589999999999999999999         666      4567899999998765432211 11122345799999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+|+++|++++ |..||......+....+......                            .....
T Consensus       175 ~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  225 (256)
T cd05059         175 YSR-FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL----------------------------YRPKL  225 (256)
T ss_pred             cCC-CCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC----------------------------CCCCC
Confidence            644 7889999999999999998 89999877666555444321100                            01123


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .+..+.+++.+||..+|++|||+.++++.
T Consensus       226 ~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         226 APTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             CCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            67889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.88  E-value=6e-22  Score=146.98  Aligned_cols=154  Identities=24%  Similarity=0.340  Sum_probs=112.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+....... .......++..|++||.+.
T Consensus       100 ~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  179 (290)
T cd05613         100 ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVR  179 (290)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhcc
Confidence            4589999999999999999999         555      56788999999987654322 1122345788999999986


Q ss_pred             CC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +. ...+.++|+||+|+++|++++|..||...........+.........                         .....
T Consensus       180 ~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~  234 (290)
T cd05613         180 GGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP-------------------------PYPQE  234 (290)
T ss_pred             CCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC-------------------------CCCcc
Confidence            53 23678899999999999999999998654322222222211111000                         00133


Q ss_pred             CCHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADKT  188 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~~  188 (197)
                      ++..+.+++.+||+.||++|+     ++++++.||||+...
T Consensus       235 ~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            567889999999999999997     899999999998774

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.88  E-value=6.9e-22  Score=146.01  Aligned_cols=141  Identities=16%  Similarity=0.248  Sum_probs=107.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.|++||         |+|      +++.++|+|||.+........  ......+++.|+|||.+.
T Consensus       118 ~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (280)
T cd05092         118 QLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL  197 (280)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhc
Confidence            488999999999999999999         666      456789999999875533211  112233467899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+||++|++++ |..||......+....+......                            .....
T Consensus       198 ~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  248 (280)
T cd05092         198 YRK-FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGREL----------------------------ERPRT  248 (280)
T ss_pred             cCC-cCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccC----------------------------CCCCC
Confidence            655 8899999999999999998 89999877666555444321110                            00123


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ++..+.+++.+||+.||.+||+++++++
T Consensus       249 ~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         249 CPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            6678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.88  E-value=8.6e-22  Score=143.91  Aligned_cols=141  Identities=18%  Similarity=0.234  Sum_probs=107.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-cccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.|++.||+||         |+|      +++.++|+|||.+......... .....++..|+|||.+.
T Consensus        97 ~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  176 (260)
T cd05070          97 RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL  176 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHh
Confidence            3589999999999999999999         666      4467899999999765432211 11223456799999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... .+.++|+||+|++++++++ |..||...+..+....+......                            .....
T Consensus       177 ~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  227 (260)
T cd05070         177 YGR-FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM----------------------------PCPQD  227 (260)
T ss_pred             cCC-CcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCc
Confidence            644 7889999999999999999 89999887766655554321110                            01133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                      .+..+.+++.+||..+|++|||++++.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         228 CPISLHELMLQCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             CCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            567899999999999999999999987

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.1e-21  Score=143.65  Aligned_cols=146  Identities=26%  Similarity=0.408  Sum_probs=110.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC---ccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~---~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|+++||.||         |+|      +++.++|+|||.++.....   ........++..|+|||.
T Consensus       101 ~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (264)
T cd06653         101 GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEV  180 (264)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhh
Confidence            3588999999999999999999         555      5677899999999765321   111123457889999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. .+.++|+||+||+++++++|..||...........+..   .+..                        .....
T Consensus       181 ~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~------------------------~~~p~  232 (264)
T cd06653         181 ISGEG-YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTK------------------------PMLPD  232 (264)
T ss_pred             hcCCC-CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCCC------------------------CCCCc
Confidence            97644 78899999999999999999999987655444433321   1110                        01124


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      .++..+.+++.+||. +|.+||++.+++.|||+
T Consensus       233 ~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         233 GVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             ccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            467889999999999 57999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.88  E-value=6.5e-22  Score=145.00  Aligned_cols=143  Identities=23%  Similarity=0.341  Sum_probs=106.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      .++.++|+|||.+..............++..|+|||.+.+
T Consensus       101 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  180 (267)
T cd08228         101 RLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE  180 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhcc
Confidence            3489999999999999999999         555      4567899999998876543333334467889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh--HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE--IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .. .+.++|+||+|+++|++++|..||.....  ......+ .....++.                          ....
T Consensus       181 ~~-~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~--------------------------~~~~  232 (267)
T cd08228         181 NG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKI-EQCDYPPL--------------------------PTEH  232 (267)
T ss_pred             CC-CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHH-hcCCCCCC--------------------------Chhh
Confidence            44 78899999999999999999999865432  2222222 11111100                          0023


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||+.+|++||+++++++
T Consensus       233 ~~~~~~~li~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         233 YSEKLRELVSMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             cCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence            5678999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.88  E-value=1e-21  Score=142.84  Aligned_cols=142  Identities=18%  Similarity=0.220  Sum_probs=104.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc--ccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY--THEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~--~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|+++||+||         |+|      .++.++|+|||.+..........  .....+..|+|||.+
T Consensus        89 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  168 (252)
T cd05084          89 PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEAL  168 (252)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhh
Confidence            3589999999999999999999         666      45678999999987544321111  111224579999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||++|++++ |..||...........+......                            ....
T Consensus       169 ~~~~-~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  219 (252)
T cd05084         169 NYGR-YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL----------------------------PCPE  219 (252)
T ss_pred             cCCC-CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC----------------------------CCcc
Confidence            7644 7889999999999999997 88999776655444433221100                            0012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||+.+|++|||+.++++
T Consensus       220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            35678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.88  E-value=1.1e-21  Score=143.37  Aligned_cols=142  Identities=18%  Similarity=0.174  Sum_probs=103.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc----ccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~~~~y~aPE   70 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||+++.......    ......++..|+|||
T Consensus        93 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  172 (262)
T cd05058          93 HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALE  172 (262)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChh
Confidence            3467788899999999999999         666      446789999999875532211    111234467899999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .+.+.. ++.++|+||+||++|++++ |.+||...+..+....+......                            ..
T Consensus       173 ~~~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~  223 (262)
T cd05058         173 SLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL----------------------------LQ  223 (262)
T ss_pred             HhccCc-cchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC----------------------------CC
Confidence            987644 8899999999999999999 56777766555444333221000                            00


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ....+..+.+++.+||..+|++||++.++++
T Consensus       224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            1235678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.88  E-value=1.3e-21  Score=145.53  Aligned_cols=148  Identities=14%  Similarity=0.172  Sum_probs=108.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC------CcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..++.++.|+++||+||         |||+|      +.++|+|||.++.......  ......++..|+|||.+.
T Consensus       126 ~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (296)
T cd05051         126 SLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL  205 (296)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhh
Confidence            589999999999999999999         77744      5679999999876533221  112234567899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh--CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT--RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.. ++.++|+||+||++|++++  +..||........+..............                     ......
T Consensus       206 ~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~  263 (296)
T cd05051         206 LGK-FTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQI---------------------YLPRPP  263 (296)
T ss_pred             cCC-CCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccc---------------------cCCCcc
Confidence            644 7899999999999999987  6788877666665555433211110000                     000113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+.++.+++.+||+.||++|||+.++++
T Consensus       264 ~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         264 NCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             CCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            35678999999999999999999999963

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.87  E-value=1.1e-21  Score=143.35  Aligned_cols=142  Identities=20%  Similarity=0.272  Sum_probs=108.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++.++..++.|++.||+||         |+|      +++.++|+|||.+....... .......++..|+|||.+.
T Consensus        97 ~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~  176 (260)
T cd05067          97 IKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhc
Confidence            3589999999999999999999         666      55778999999997664221 1122334567899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++|+||+|++++++++ |..||.+.+.......+......+                            ....
T Consensus       177 ~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~  227 (260)
T cd05067         177 YGT-FTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMP----------------------------RPDN  227 (260)
T ss_pred             cCC-cCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCC----------------------------CCCC
Confidence            644 7889999999999999998 999998877666555543211110                            0123


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||+.+|++||++++++.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         228 CPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            5678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.87  E-value=1.2e-21  Score=144.87  Aligned_cols=142  Identities=15%  Similarity=0.227  Sum_probs=107.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++.++..++.|++.||+||         |+|      ++..++|+|||+++......  .......++..|+|||.+.
T Consensus       120 ~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05090         120 SLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM  199 (283)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhc
Confidence            478899999999999999999         777      44668999999997653321  1122234467899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+||+++++++ |..||.+.........+......                            .....
T Consensus       200 ~~~-~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  250 (283)
T cd05090         200 YGK-FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL----------------------------PCSED  250 (283)
T ss_pred             cCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC----------------------------CCCCC
Confidence            644 7899999999999999998 99999876655444443221000                            01123


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ++..+.+++.+||+.||++||++.+++++
T Consensus       251 ~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         251 CPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             CCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            56789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.87  E-value=1.3e-21  Score=145.19  Aligned_cols=142  Identities=17%  Similarity=0.201  Sum_probs=107.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.++.......  ......++..|+|||.+
T Consensus       122 ~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~  201 (290)
T cd05045         122 RALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESL  201 (290)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHH
Confidence            3588999999999999999999         666      456789999999876533221  11223446789999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+|+++++|++ |..||.+.........+......                            ....
T Consensus       202 ~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  252 (290)
T cd05045         202 FDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRM----------------------------ERPE  252 (290)
T ss_pred             ccCC-cchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC----------------------------CCCC
Confidence            7644 7899999999999999998 99999877665554443221100                            0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||+.+|++||+++++++
T Consensus       253 ~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         253 NCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             CCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            36678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.87  E-value=1.2e-21  Score=143.63  Aligned_cols=143  Identities=23%  Similarity=0.327  Sum_probs=106.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |+|      .++.++|+|||.+..............++..|+|||.+.+
T Consensus       101 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~  180 (267)
T cd08229         101 RLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE  180 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcC
Confidence            3589999999999999999999         666      5567899999998766543333334567889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH--HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI--DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .. .+.++|+||+|+++|++++|..||.+....  .....+... ..++                          .....
T Consensus       181 ~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~--------------------------~~~~~  232 (267)
T cd08229         181 NG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-DYPP--------------------------LPSDH  232 (267)
T ss_pred             CC-ccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC-CCCC--------------------------CCccc
Confidence            44 788999999999999999999998654322  111111110 0000                          00023


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||+.||++|||+.+|++
T Consensus       233 ~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         233 YSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             ccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence            6678999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.87  E-value=1.1e-21  Score=144.59  Aligned_cols=139  Identities=18%  Similarity=0.192  Sum_probs=103.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCCCCc-------------EEEeecCCccccCCCccccccceeccce
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPKSNI-------------VKVADFGLARAFGVPVRIYTHEVVTLWY   66 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~-------------vkl~Dfg~s~~~~~~~~~~~~~~~~~~y   66 (197)
                      ...+++..+..++.|++.||+||         |||+|..             ++++|||.+......    ....++..|
T Consensus       111 ~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~  186 (274)
T cd05076         111 KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR----EERVERIPW  186 (274)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc----cccccCCcc
Confidence            45689999999999999999999         7775533             689999987644222    123567889


Q ss_pred             eCchhhcCCCCCCCchhhhhhhHHHHHHH-hCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhh
Q psy6390          67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIA-TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC  145 (197)
Q Consensus        67 ~aPE~~~~~~~~~~~~Diws~g~~l~~ll-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (197)
                      +|||.+.+...++.++|+||+||++|+++ .|..||................ .                          
T Consensus       187 ~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~--------------------------  239 (274)
T cd05076         187 IAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKH-R--------------------------  239 (274)
T ss_pred             cCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhcc-C--------------------------
Confidence            99999876555789999999999999985 5889987665443322111100 0                          


Q ss_pred             hhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       146 ~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                         .....+..+.+++.+||+.+|++||++++++++
T Consensus       240 ---~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         240 ---LPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             ---CCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence               001234578899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.87  E-value=1.3e-21  Score=144.39  Aligned_cols=142  Identities=18%  Similarity=0.172  Sum_probs=107.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..++.++.|++.||+||         |+|      +++.++|+|||+++.+.....  ......++..|+|||.+
T Consensus       112 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~  191 (280)
T cd05043         112 QALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESL  191 (280)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHH
Confidence            3589999999999999999999         666      457789999999986533221  11223456789999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|++++ |..||......+....+......                            ....
T Consensus       192 ~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  242 (280)
T cd05043         192 VNKE-YSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRL----------------------------AQPI  242 (280)
T ss_pred             hcCC-CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCC----------------------------CCCC
Confidence            7644 7899999999999999998 99999877665544433321000                            0012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||..||++|||+.++++
T Consensus       243 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         243 NCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            35678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.87  E-value=1.9e-21  Score=142.16  Aligned_cols=141  Identities=20%  Similarity=0.260  Sum_probs=107.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++..+..++.|++.||+||         |+|      +++.++|+|||.+........ ......++..|+|||...+
T Consensus        98 ~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~  177 (260)
T cd05069          98 YLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY  177 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhcc
Confidence            478899999999999999999         666      446689999999976543221 1122345678999998876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. .+.++|+||+|+++|++++ |..||.+....+....+......+                            .....
T Consensus       178 ~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  228 (260)
T cd05069         178 GR-FTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMP----------------------------CPQGC  228 (260)
T ss_pred             CC-cChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CCccc
Confidence            44 7899999999999999999 999998877665555443211110                            01235


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      +..+.+++.+||..||++||+++++++
T Consensus       229 ~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         229 PESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.87  E-value=1.8e-21  Score=141.89  Aligned_cols=138  Identities=20%  Similarity=0.229  Sum_probs=106.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|++.||+||         |+|      +++.++|+|||.++......   .....+..|+|||.+...
T Consensus        98 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~  174 (256)
T cd05082          98 VLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREK  174 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC---CCCccceeecCHHHHccC
Confidence            488999999999999999999         666      55778999999987554322   122345679999998764


Q ss_pred             CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      . ++.++|+||+||++|++++ |..||...........+......                            ...+.++
T Consensus       175 ~-~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  225 (256)
T cd05082         175 K-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM----------------------------DAPDGCP  225 (256)
T ss_pred             C-CCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCCCCCC
Confidence            4 7889999999999999997 99999877665555544321000                            0113467


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+.+++.+||+.+|++|||+.++++
T Consensus       226 ~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         226 PVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            88999999999999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG1035|consensus

Probab=99.87  E-value=5.4e-22  Score=162.68  Aligned_cols=146  Identities=24%  Similarity=0.336  Sum_probs=106.6

Q ss_pred             CHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCcccc------------------CCCcccccc
Q psy6390          13 GTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAF------------------GVPVRIYTH   59 (197)
Q Consensus        13 ~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~------------------~~~~~~~~~   59 (197)
                      ..+.++.+++||++||+|+         |||      ++..|||+|||+|...                  +.+....+.
T Consensus       695 ~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts  774 (1351)
T KOG1035|consen  695 QRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTS  774 (1351)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccccc
Confidence            4788999999999999999         888      5577899999999762                  011123456


Q ss_pred             ceeccceeCchhhcCCC--CCCCchhhhhhhHHHHHHHhCCCCCCCC-ChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy6390          60 EVVTLWYRAPEVLLGSQ--RYSCPVDVWSIGCIFAEIATRKPLFQGD-SEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT  136 (197)
Q Consensus        60 ~~~~~~y~aPE~~~~~~--~~~~~~Diws~g~~l~~ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (197)
                      .+||..|+|||++.+..  .|+.|+|+||+|++++||+..   |... .+...+..+.....+.+          +++. 
T Consensus       775 ~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~TsMERa~iL~~LR~g~iP~~----------~~f~-  840 (1351)
T KOG1035|consen  775 QVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTSMERASILTNLRKGSIPEP----------ADFF-  840 (1351)
T ss_pred             ccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCchHHHHHHHHhcccCCCCCC----------cccc-
Confidence            79999999999997654  599999999999999999864   5433 23333433322111111          0100 


Q ss_pred             CCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         137 TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                                    ...-.....+|+.|++.||++||||.|+|++.||.-
T Consensus       841 --------------~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  841 --------------DPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             --------------cccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence                          111245678999999999999999999999999973

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.87  E-value=1.4e-21  Score=143.98  Aligned_cols=141  Identities=20%  Similarity=0.250  Sum_probs=107.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.||+||         |+|      +++.++|+|||.++.......  ......++..|+|||.+.
T Consensus       115 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05032         115 PPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK  194 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHh
Confidence            367889999999999999999         666      557789999999876543221  112234577899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. .+.++|+||+||++|++++ |..||...+.......+... ..+                           .....
T Consensus       195 ~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~  245 (277)
T cd05032         195 DGV-FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG-GHL---------------------------DLPEN  245 (277)
T ss_pred             cCC-CCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcC-CCC---------------------------CCCCC
Confidence            644 7899999999999999998 99999877766555544311 000                           00122


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||+.+|++|||+.++++
T Consensus       246 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         246 CPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            4678899999999999999999999974

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.87  E-value=2.2e-21  Score=141.99  Aligned_cols=141  Identities=21%  Similarity=0.261  Sum_probs=107.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-cccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++..+..++.|+++||+||         |+|      +++.++|+|||.+......... .....++..|+|||...+
T Consensus        98 ~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  177 (262)
T cd05071          98 YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY  177 (262)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhcc
Confidence            478999999999999999999         777      4456899999999765433221 122345678999998876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++|+||+||++|++++ |..||...........+......+                            .....
T Consensus       178 ~~-~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  228 (262)
T cd05071         178 GR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP----------------------------CPPEC  228 (262)
T ss_pred             CC-CCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCC----------------------------Ccccc
Confidence            44 7899999999999999999 888998776665554442210000                            01235


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      +..+.+++.+||+.||++||+++++++
T Consensus       229 ~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         229 PESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.87  E-value=1.6e-21  Score=145.60  Aligned_cols=143  Identities=21%  Similarity=0.267  Sum_probs=108.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~   72 (197)
                      ..++...+..++.|+++||+||         |||      +++.++|+|||.++........  .....++..|+|||.+
T Consensus       132 ~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  211 (304)
T cd05101         132 EQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEAL  211 (304)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhh
Confidence            3578889999999999999999         777      4466899999999866432211  1223446789999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+|+++|++++ |..||.+.+..+....+......                            ....
T Consensus       212 ~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  262 (304)
T cd05101         212 FDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM----------------------------DKPA  262 (304)
T ss_pred             ccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC----------------------------CCCC
Confidence            7644 7899999999999999998 78888877766655554321100                            0013


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+..+.+++.+||..+|.+||++.++++.
T Consensus       263 ~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         263 NCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             CCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            367889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.87  E-value=2.4e-21  Score=141.18  Aligned_cols=143  Identities=20%  Similarity=0.226  Sum_probs=107.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.|++||         |+|      .++.++|+|||.+........ ......++..|+|||.+.
T Consensus        95 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~  174 (256)
T cd05112          95 GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFS  174 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhc
Confidence            4588999999999999999999         666      456789999999875543211 112233467899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+|+++|++++ |..||...........+.......                            ....
T Consensus       175 ~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~  225 (256)
T cd05112         175 FSK-YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLY----------------------------KPRL  225 (256)
T ss_pred             cCC-cChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCC----------------------------CCCC
Confidence            644 7889999999999999998 999998777665555543211000                            0022


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .+..+.+++.+||+.+|++|||+++++++
T Consensus       226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         226 ASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            46789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.87  E-value=2.9e-21  Score=144.91  Aligned_cols=141  Identities=20%  Similarity=0.260  Sum_probs=106.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~~   73 (197)
                      .++..++..++.|++.||+||         |||      +++.++|+|||.++........  .....++..|+|||.+.
T Consensus       130 ~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  209 (314)
T cd05099         130 QLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALF  209 (314)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHc
Confidence            488899999999999999999         666      5577899999999765432111  11123346799999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+|+++|++++ |..||.+.+..+....+......                            .....
T Consensus       210 ~~~-~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  260 (314)
T cd05099         210 DRV-YTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRM----------------------------DKPSN  260 (314)
T ss_pred             cCC-cCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCC
Confidence            644 8899999999999999998 88999877766655554321000                            00133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ++..+.+++.+||..||++||++.++++
T Consensus       261 ~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         261 CTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            5678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.87  E-value=2.2e-21  Score=145.10  Aligned_cols=142  Identities=20%  Similarity=0.263  Sum_probs=106.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc--ccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY--THEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~--~~~~~~~~y~aPE~~~   73 (197)
                      .++..++..++.|++.||+||         |+|      +++.++|+|||.+..........  ....++..|+|||.+.
T Consensus       136 ~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  215 (307)
T cd05098         136 QLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF  215 (307)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhc
Confidence            488899999999999999999         666      45678999999987654321111  1123356899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+||++|++++ |..||...+..+....+......                            .....
T Consensus       216 ~~~-~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  266 (307)
T cd05098         216 DRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM----------------------------DKPSN  266 (307)
T ss_pred             cCC-CCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCC----------------------------CCCCc
Confidence            644 7899999999999999998 88898776655444433221000                            01133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .+..+.+++.+||..+|++||++.+++++
T Consensus       267 ~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         267 CTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            56889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.87  E-value=3e-21  Score=144.09  Aligned_cols=141  Identities=18%  Similarity=0.283  Sum_probs=106.0

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhcC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~~   74 (197)
                      +++.++..++.|++.||+||         |+|      .+..++|+|||.++.......  ......++..|+|||.+.+
T Consensus       138 l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  217 (302)
T cd05055         138 LTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN  217 (302)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhcc
Confidence            89999999999999999999         677      446679999999986543321  1112345678999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++|+||+||++|++++ |..||..................+                           ......
T Consensus       218 ~~-~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~  269 (302)
T cd05055         218 CV-YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM---------------------------AQPEHA  269 (302)
T ss_pred             CC-CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC---------------------------CCCCCC
Confidence            55 7889999999999999998 999998766554443332210000                           001235


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      +..+.+++.+||+.+|++||++.++++
T Consensus       270 ~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         270 PAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.87  E-value=1.4e-21  Score=145.88  Aligned_cols=141  Identities=22%  Similarity=0.247  Sum_probs=104.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..++.++.|++.|++||         |+|      +++.++|+|||++....... .......+..|+|||.+...
T Consensus       120 ~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  198 (303)
T cd05088         120 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYS  198 (303)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhh-hcccCCCcccccCHHHHhcc
Confidence            588999999999999999999         777      44678999999986432111 11112335679999988664


Q ss_pred             CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      . ++.++|+||+||+++++++ |..||...+..+....+......                            ......+
T Consensus       199 ~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  249 (303)
T cd05088         199 V-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL----------------------------EKPLNCD  249 (303)
T ss_pred             C-CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcC----------------------------CCCCCCC
Confidence            4 7899999999999999998 99999877665544433210000                            0012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+.+++.+||+.+|++||++++++++
T Consensus       250 ~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         250 DEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.87  E-value=4.1e-21  Score=140.95  Aligned_cols=143  Identities=21%  Similarity=0.334  Sum_probs=110.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.|++.||.||          |+|      +++.++|+|||.+....... ......++..|++||.+.
T Consensus       108 ~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~  186 (269)
T cd08528         108 QRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES-KLTSVVGTILYSCPEIVK  186 (269)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc-ccccccCcccCcChhhhc
Confidence            4589999999999999999999          444      55678999999997655433 233456788999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++|+||+|+++|++++|..||...........+......+..                           ....
T Consensus       187 ~~~-~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  238 (269)
T cd08528         187 NEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLP---------------------------EGMY  238 (269)
T ss_pred             CCC-CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCC---------------------------cccC
Confidence            644 789999999999999999999999877665554444321111100                           0135


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +..+.+++.+||+.||++||++.|+..+
T Consensus       239 ~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         239 SEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             CHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            6789999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=2.8e-21  Score=141.21  Aligned_cols=142  Identities=21%  Similarity=0.271  Sum_probs=108.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.|++||         |+|      +++.++|+|||.+........ .......+..|+|||.+.
T Consensus        98 ~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  177 (261)
T cd05034          98 KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAAN  177 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhc
Confidence            3589999999999999999999         666      456789999999876643211 111223356899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. .+.++|+||+|++++++++ |+.||.+.........+......+.                            ...
T Consensus       178 ~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------------~~~  228 (261)
T cd05034         178 YGR-FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPR----------------------------PPN  228 (261)
T ss_pred             cCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------CCC
Confidence            644 7899999999999999998 9999988777666666543211110                            122


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||..+|++||+++++++
T Consensus       229 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         229 CPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             CCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            4678899999999999999999999873

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.87  E-value=3.3e-21  Score=141.60  Aligned_cols=142  Identities=21%  Similarity=0.231  Sum_probs=107.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-cccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.||+||         |+|      .++.++|+|||.++........ .....++..|+|||.+.
T Consensus       102 ~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (270)
T cd05056         102 YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESIN  181 (270)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhc
Confidence            3589999999999999999999         777      4467899999998765433211 11223356799999986


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++|+||+|++++++++ |..||......+....+......                            .....
T Consensus       182 ~~~-~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~  232 (270)
T cd05056         182 FRR-FTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL----------------------------PMPPN  232 (270)
T ss_pred             cCC-CCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC----------------------------CCCCC
Confidence            544 7899999999999999986 99999887766665554321100                            01133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+|+..+|.+|||+.+++.
T Consensus       233 ~~~~~~~li~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         233 CPPTLYSLMTKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            5778999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.87  E-value=4e-21  Score=143.49  Aligned_cols=142  Identities=16%  Similarity=0.149  Sum_probs=105.2

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.||+||         |||      +++.+||+|||.++........  .....++..|++||.+.
T Consensus       105 ~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (303)
T cd05110         105 NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH  184 (303)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhc
Confidence            588999999999999999999         777      4466899999999865432211  12234467899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+||++|++++ |..||.+.........+ .....++                           ....
T Consensus       185 ~~~-~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~---------------------------~~~~  235 (303)
T cd05110         185 YRK-FTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGERLP---------------------------QPPI  235 (303)
T ss_pred             cCC-CChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCCCC---------------------------CCCC
Confidence            644 7899999999999999997 88999776544433322 2111000                           0123


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .+..+.+++.+||..+|++||+++++++.
T Consensus       236 ~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         236 CTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            45688999999999999999999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.87  E-value=5e-21  Score=139.44  Aligned_cols=140  Identities=19%  Similarity=0.249  Sum_probs=107.8

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccc-cceeccceeCchhhcCC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYT-HEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~-~~~~~~~y~aPE~~~~~   75 (197)
                      +++..+..++.|++.|++||         |+|      +++.++|+|||.+........... ...++..|+|||.+.. 
T Consensus       100 ~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-  178 (258)
T smart00219      100 LSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKD-  178 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhcc-
Confidence            89999999999999999999         666      446789999999976654322111 1235788999999855 


Q ss_pred             CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...+.++|+||+|++++++++ |..||...+.......+......                            ......+
T Consensus       179 ~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  230 (258)
T smart00219      179 GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL----------------------------PKPENCP  230 (258)
T ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCCCcCC
Confidence            337899999999999999998 88999877666666554321110                            0012267


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+.+++.+||..||++|||+.++++
T Consensus       231 ~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      231 PEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            88999999999999999999999985

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.87  E-value=2.5e-21  Score=142.29  Aligned_cols=140  Identities=22%  Similarity=0.250  Sum_probs=104.2

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|++.|++||         |+|      +++.++|+|||++....... .......+..|+|||.+...
T Consensus       108 ~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~-~~~~~~~~~~y~apE~~~~~  186 (270)
T cd05047         108 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYS  186 (270)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhh-hccCCCCccccCChHHHccC
Confidence            488999999999999999999         777      44667999999986332111 11112235679999998664


Q ss_pred             CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      . ++.++|+||+||+++++++ |..||...+..+....+......                            ......+
T Consensus       187 ~-~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  237 (270)
T cd05047         187 V-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL----------------------------EKPLNCD  237 (270)
T ss_pred             C-CCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCC----------------------------CCCCcCC
Confidence            4 8899999999999999997 99999877665555444221000                            0012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+.+++.+||..||.+|||++++++
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         238 DEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHH
Confidence            78899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=3.8e-21  Score=140.57  Aligned_cols=142  Identities=23%  Similarity=0.287  Sum_probs=107.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-cccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.|+.||         |+|      +++.++|+|||.++........ ......+..|+|||.+.
T Consensus        98 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  177 (261)
T cd05068          98 RALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAAL  177 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccc
Confidence            3589999999999999999999         777      4467899999999876532211 11112245799999887


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++|+||+|++++++++ |..||.+.........+......+                            ....
T Consensus       178 ~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~  228 (261)
T cd05068         178 YNR-FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMP----------------------------CPPG  228 (261)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CCCc
Confidence            644 7899999999999999999 999998877666555553321110                            0023


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||+.+|.+||++.++++
T Consensus       229 ~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         229 CPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             CCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            5678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.86  E-value=5.1e-21  Score=139.51  Aligned_cols=143  Identities=21%  Similarity=0.199  Sum_probs=108.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc---cccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI---YTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~---~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+.........   .....++..|+|||.
T Consensus        92 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~  171 (257)
T cd05040          92 GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPES  171 (257)
T ss_pred             ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHH
Confidence            3589999999999999999999         666      4577899999999876442211   112345678999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++|+||+||++++|++ |..||......+....+.......                           ...
T Consensus       172 ~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~  223 (257)
T cd05040         172 LRTRT-FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERL---------------------------ERP  223 (257)
T ss_pred             hcccC-cCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcC---------------------------CCC
Confidence            87644 7889999999999999998 999998777666555543211000                           000


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...+..+.+++.+||+.+|++||++.++++
T Consensus       224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         224 EACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             ccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            235678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.86  E-value=4.9e-21  Score=140.48  Aligned_cols=143  Identities=17%  Similarity=0.216  Sum_probs=106.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc---ccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~---~~~~~~~~y~aPE   70 (197)
                      ...+++..+..++.|++.|++||         |+|      ++..++|+|||.+..........   .....+..|+|||
T Consensus       101 ~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE  180 (268)
T cd05063         101 DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPE  180 (268)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHH
Confidence            35689999999999999999999         666      44567999999987654321111   1112345799999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .+.... ++.++|+||+||++|++++ |..||......+....+......+.                            
T Consensus       181 ~~~~~~-~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~----------------------------  231 (268)
T cd05063         181 AIAYRK-FTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPA----------------------------  231 (268)
T ss_pred             HhhcCC-cChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCC----------------------------
Confidence            987644 7899999999999999987 9999987776665555532211110                            


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ....+..+.+++.+||..+|++||++.++++
T Consensus       232 ~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         232 PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            0235678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0199|consensus

Probab=99.86  E-value=1.6e-21  Score=152.63  Aligned_cols=145  Identities=22%  Similarity=0.229  Sum_probs=117.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCcccccc---ceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIYTH---EVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~---~~~~~~y~aPE~   71 (197)
                      ..|-...++.|+.||+.||.||               +.-.-.+|||+|||+.+.++...+.+..   .-.+..|-|||.
T Consensus       207 ~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEs  286 (1039)
T KOG0199|consen  207 AILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPES  286 (1039)
T ss_pred             cceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhH
Confidence            3578889999999999999999               2225578999999999988765544422   223678999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++|+|++||++|||++ |..||.+.....++.++...-                            .-...
T Consensus       287 Lrh~k-FShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e----------------------------rLpRP  337 (1039)
T KOG0199|consen  287 LRHRK-FSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE----------------------------RLPRP  337 (1039)
T ss_pred             hcccc-ccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc----------------------------cCCCC
Confidence            98866 9999999999999999999 899999999999988874211                            11223


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKY  183 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~  183 (197)
                      +.+++++.+++.+||..+|..|||+..|.+.-+
T Consensus       338 k~csedIY~imk~cWah~paDRptFsair~~~~  370 (1039)
T KOG0199|consen  338 KYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV  370 (1039)
T ss_pred             CCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence            568899999999999999999999998865433

>KOG0200|consensus

Probab=99.86  E-value=2.8e-21  Score=155.78  Aligned_cols=139  Identities=20%  Similarity=0.248  Sum_probs=106.2

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCcccc-ccce--eccceeCchhhc
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIY-THEV--VTLWYRAPEVLL   73 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~-~~~~--~~~~y~aPE~~~   73 (197)
                      ++..++..++.||+.|++||               +..++..+||+|||+|+......... ....  -+..|||||.+.
T Consensus       415 L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~  494 (609)
T KOG0200|consen  415 LTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF  494 (609)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhc
Confidence            89999999999999999999               33377889999999998654432222 1112  356799999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCC-hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDS-EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      ... ++.++|+||+|+++||+++ |..||.+.. ..+....+..+.                            ....+.
T Consensus       495 ~~~-ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~----------------------------r~~~P~  545 (609)
T KOG0200|consen  495 DRV-FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGN----------------------------RMEQPE  545 (609)
T ss_pred             cCc-ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCC----------------------------CCCCCC
Confidence            844 9999999999999999998 889998754 334433332211                            011224


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                      .++.++.++++.||+.+|++||++.++.
T Consensus       546 ~c~~eiY~iM~~CW~~~p~~RP~F~~~~  573 (609)
T KOG0200|consen  546 HCSDEIYDLMKSCWNADPEDRPTFSECV  573 (609)
T ss_pred             CCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence            4688999999999999999999999876

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.86  E-value=5e-21  Score=141.88  Aligned_cols=141  Identities=16%  Similarity=0.263  Sum_probs=105.5

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.||+||         |+|      +++.++|+|||.+........  .......+..|+|||.+.
T Consensus       126 ~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (288)
T cd05050         126 PLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF  205 (288)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHh
Confidence            478889999999999999999         666      456789999999875432211  112233467799999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+||++|++++ |..||.+....+....+......                            .....
T Consensus       206 ~~~-~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  256 (288)
T cd05050         206 YNR-YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVL----------------------------SCPDN  256 (288)
T ss_pred             cCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCCCC
Confidence            644 8899999999999999997 88888777666555444221000                            00123


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||+.+|++|||++|+++
T Consensus       257 ~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         257 CPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             CCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            5678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.86  E-value=5.4e-21  Score=140.27  Aligned_cols=142  Identities=18%  Similarity=0.207  Sum_probs=107.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc---ccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~---~~~~~~~~y~aPE~   71 (197)
                      ..+++.++..++.|+++|++||         |+|      +++.++|+|||.+..........   ....++..|++||.
T Consensus       101 ~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~  180 (267)
T cd05066         101 GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA  180 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhH
Confidence            4589999999999999999999         666      44678999999998664322111   11123567999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++|+||+||+++++++ |..||......+....+......+                            ..
T Consensus       181 ~~~~~-~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~  231 (267)
T cd05066         181 IAYRK-FTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLP----------------------------AP  231 (267)
T ss_pred             hccCc-cCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCC----------------------------CC
Confidence            97644 7899999999999999886 999998776665555543221110                            01


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...+..+.+++.+||+.+|.+||++.++++
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         232 MDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             CCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            235678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=6.6e-21  Score=138.90  Aligned_cols=138  Identities=17%  Similarity=0.201  Sum_probs=106.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..++.++.|++.|++||         |+|      .++.++|+|||.++.......   ....+..|+|||.+...
T Consensus        98 ~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~ape~~~~~  174 (256)
T cd05039          98 VITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD---SGKLPVKWTAPEALREK  174 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc---cCCCcccccCchhhcCC
Confidence            589999999999999999999         777      456789999999987643222   22345679999998764


Q ss_pred             CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      . ++.++|+||+|++++++++ |..||......+....+......                            ......+
T Consensus       175 ~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  225 (256)
T cd05039         175 K-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM----------------------------EAPEGCP  225 (256)
T ss_pred             c-CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCccCCC
Confidence            4 7889999999999999997 99999877665554444321000                            0012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+.+++.+||..+|++||++++++.
T Consensus       226 ~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         226 PEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHH
Confidence            88999999999999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0695|consensus

Probab=99.86  E-value=1.9e-21  Score=141.20  Aligned_cols=154  Identities=20%  Similarity=0.290  Sum_probs=122.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ++++|.+++.+..+|.-||.||               +....+++||+|||.++..-.+.+...+.+||+-|.|||++.+
T Consensus       346 rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrg  425 (593)
T KOG0695|consen  346 RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG  425 (593)
T ss_pred             hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcc
Confidence            5699999999999999999999               3336689999999999987666677778899999999999988


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCC-------CChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQG-------DSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      .. |+..+|.|++||++++|+.|+.||+-       .+..+.+..++-.                            ..-
T Consensus       426 ee-ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile----------------------------kqi  476 (593)
T KOG0695|consen  426 EE-YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE----------------------------KQI  476 (593)
T ss_pred             cc-cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh----------------------------hcc
Confidence            55 99999999999999999999999963       2334444443310                            011


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCC------CHHHHhcCcccCCCCCcchh
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRI------NAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~------s~~ell~hp~~~~~~~~~~~  193 (197)
                      ..+..+|-.+..+++.-|++||++|+      ...++-.|+||+.+ +++-+
T Consensus       477 riprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i-dwd~l  527 (593)
T KOG0695|consen  477 RIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI-DWDLL  527 (593)
T ss_pred             cccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC-CHHHH
Confidence            12244667788999999999999998      46789999999954 44433

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.86  E-value=8e-21  Score=138.04  Aligned_cols=142  Identities=18%  Similarity=0.261  Sum_probs=105.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc--ccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY--THEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~--~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|++.|++||         |+|      +++.++|+|||.+..........  .....+..|+|||.+
T Consensus        88 ~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  167 (251)
T cd05041          88 NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEAL  167 (251)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhh
Confidence            4588999999999999999999         666      44678999999987654221111  112235679999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||+++++++ |..||...........+......+                            ...
T Consensus       168 ~~~~-~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~  218 (251)
T cd05041         168 NYGR-YTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP----------------------------APQ  218 (251)
T ss_pred             ccCC-CCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC----------------------------CCc
Confidence            7644 8899999999999999998 888998776555444432211000                            012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||..+|.+|||++|+++
T Consensus       219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         219 LCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             cCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            35678999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.86  E-value=5.5e-21  Score=147.52  Aligned_cols=143  Identities=21%  Similarity=0.261  Sum_probs=105.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|+++||+||         |||      ++..++|+|||+++.......  ......++..|+|||.+
T Consensus       232 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  311 (400)
T cd05105         232 EGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESI  311 (400)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhh
Confidence            3589999999999999999999         666      456789999999976533211  12223456789999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|++++ |..||..................+                           ....
T Consensus       312 ~~~~-~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  363 (400)
T cd05105         312 FDNL-YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRM---------------------------AKPD  363 (400)
T ss_pred             cCCC-CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCC---------------------------CCCc
Confidence            7644 7899999999999999997 889987654433333222210000                           0013


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .++..+.+++.+||+.||++||++.++.+
T Consensus       364 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         364 HATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             cCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            46788999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=7e-21  Score=141.63  Aligned_cols=148  Identities=14%  Similarity=0.152  Sum_probs=106.2

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.||+||         |+|      +++.+||+|||++........  ......++..|+|||.+.
T Consensus       125 ~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  204 (295)
T cd05097         125 SVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL  204 (295)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhc
Confidence            368889999999999999999         777      445689999999875433211  112234467899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh--CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT--RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      ... ++.++|+||+||+++++++  +..||...........+...........                     .....+
T Consensus       205 ~~~-~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~  262 (295)
T cd05097         205 LGK-FTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQI---------------------YLSQTP  262 (295)
T ss_pred             cCC-cCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccc---------------------cCCCCC
Confidence            644 8899999999999999988  6678877666555544433211100000                     001113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||+.||++||+++++++
T Consensus       263 ~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         263 LCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            35688999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.86  E-value=5.5e-21  Score=144.62  Aligned_cols=142  Identities=20%  Similarity=0.258  Sum_probs=107.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~~~~~y~aPE~~~   73 (197)
                      .++...+..++.|++.||+||         |+|      +++.++|+|||.++........  .....++..|+|||.+.
T Consensus       130 ~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  209 (334)
T cd05100         130 QLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALF  209 (334)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhc
Confidence            478888999999999999999         677      4567899999998765432111  11223356799999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+|+++|+|++ |..||.+.+..+....+......                            .....
T Consensus       210 ~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  260 (334)
T cd05100         210 DRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRM----------------------------DKPAN  260 (334)
T ss_pred             cCC-cCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCC
Confidence            644 7889999999999999998 88999887766655544321000                            01133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .+..+.+++.+||+.+|++||++.+++++
T Consensus       261 ~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         261 CTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            56789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.86  E-value=8.8e-21  Score=137.73  Aligned_cols=142  Identities=18%  Similarity=0.253  Sum_probs=106.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc-ccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY-THEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~-~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||.|+         |+|      +++.++|+|||.+.......... ....++..|+|||.+.
T Consensus        88 ~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  167 (250)
T cd05085          88 DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALN  167 (250)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhc
Confidence            3588999999999999999999         666      45668999999987543321111 1123356799999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+|+++|++++ |..||...........+......                            .....
T Consensus       168 ~~~-~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  218 (250)
T cd05085         168 YGR-YSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM----------------------------SCPQK  218 (250)
T ss_pred             cCC-CCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCC
Confidence            644 7889999999999999998 99999877665555444321100                            00123


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||..+|++||++.++++
T Consensus       219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         219 CPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             CCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            5678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=7.9e-21  Score=140.23  Aligned_cols=142  Identities=20%  Similarity=0.238  Sum_probs=107.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc--ccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY--THEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~--~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|++.||+||         |+|      +++.++|+|||.++.........  ....++..|++||.+
T Consensus       104 ~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  183 (279)
T cd05057         104 DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESI  183 (279)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHh
Confidence            4589999999999999999999         777      44678999999998664322211  112235689999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .... ++.++|+||+|++++++++ |..||......+....+......                            ....
T Consensus       184 ~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  234 (279)
T cd05057         184 LHRI-YTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERL----------------------------PQPP  234 (279)
T ss_pred             hcCC-cCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCC----------------------------CCCC
Confidence            6544 7889999999999999998 99999887766555444321100                            0012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||..||.+||++.++++
T Consensus       235 ~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         235 ICTIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            25568899999999999999999998763

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.86  E-value=7.9e-21  Score=144.25  Aligned_cols=144  Identities=19%  Similarity=0.259  Sum_probs=104.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..++...+..++.|+++||+||         |||      +++.++|+|||++........  ......++..|+|||.+
T Consensus       174 ~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  253 (343)
T cd05103         174 KVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI  253 (343)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHh
Confidence            4588999999999999999999         777      456789999999876532211  11122345679999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+|++++++++ |..||...................                           ....
T Consensus       254 ~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  305 (343)
T cd05103         254 FDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM---------------------------RAPD  305 (343)
T ss_pred             cCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC---------------------------CCCC
Confidence            7644 8899999999999999997 899987654332222221100000                           0002


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+..+.+++.+||+.||++||++.++++|
T Consensus       306 ~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         306 YTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            245688999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.86  E-value=6.8e-21  Score=139.52  Aligned_cols=143  Identities=23%  Similarity=0.346  Sum_probs=105.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++|++||         |+|      .++.++|+|||.+..............++..|+|||.+.+
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~  180 (267)
T cd08224         101 RLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE  180 (267)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhcc
Confidence            3489999999999999999999         665      5567899999998766543333334467888999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh--HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE--IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .. ++.++|+||+||++|++++|..||.....  .+....+......       .          .          ....
T Consensus       181 ~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------~----------~----------~~~~  232 (267)
T cd08224         181 NG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYP-------P----------L----------PADH  232 (267)
T ss_pred             CC-CCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCC-------C----------C----------Chhh
Confidence            44 78899999999999999999999865432  1122221110000       0          0          0023


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||..+|++|||+.++++
T Consensus       233 ~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         233 YSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             cCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            5678999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0587|consensus

Probab=99.86  E-value=6.5e-22  Score=157.64  Aligned_cols=155  Identities=24%  Similarity=0.353  Sum_probs=125.5

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ...++.|..+..|++.++.|+.+|         ||.      .++.|||.|||.+....+......+.+||+.|||||++
T Consensus       116 ~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEVi  195 (953)
T KOG0587|consen  116 KGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVI  195 (953)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceee
Confidence            356799999999999999999999         333      77889999999999887766666778999999999999


Q ss_pred             cCC----CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          73 LGS----QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        73 ~~~----~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ...    ..|+..+|+||+|++..||-.|.+|+....+...+..+.+   .|+    +...                   
T Consensus       196 ac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR---NPP----PkLk-------------------  249 (953)
T KOG0587|consen  196 ACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---NPP----PKLK-------------------  249 (953)
T ss_pred             ecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC---CCC----cccc-------------------
Confidence            532    2377899999999999999999999988877766655532   221    1111                   


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .+.+-++.+.++|..||..|-++||+..++++|||++...
T Consensus       250 rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~  289 (953)
T KOG0587|consen  250 RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP  289 (953)
T ss_pred             chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence            1133457889999999999999999999999999998554

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.85  E-value=8.8e-21  Score=139.16  Aligned_cols=141  Identities=18%  Similarity=0.248  Sum_probs=105.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC------C-----cEEEeecCCccccCCCcc--ccccceeccceeC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS------N-----IVKVADFGLARAFGVPVR--IYTHEVVTLWYRA   68 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~-----~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~a   68 (197)
                      .+++.++..++.|++.|++||         |+|+|      .     .++|+|||+++.......  ......++..|+|
T Consensus       102 ~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  181 (269)
T cd05044         102 LLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMA  181 (269)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccC
Confidence            378899999999999999999         66633      3     689999999876533211  1112344678999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      ||.+.+.. ++.++|+||+||++|++++ |..||......+....+......                            
T Consensus       182 PE~~~~~~-~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------------------------  232 (269)
T cd05044         182 PESLLDGK-FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRL----------------------------  232 (269)
T ss_pred             HHHHccCC-cccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCcc----------------------------
Confidence            99997655 8899999999999999998 99999877665554443211000                            


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ......+..+.+++.+||..+|.+||++.++++
T Consensus       233 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         233 QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             CCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            011335678899999999999999999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.85  E-value=1.2e-20  Score=135.86  Aligned_cols=146  Identities=38%  Similarity=0.586  Sum_probs=110.0

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCCC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ   76 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~~   76 (197)
                      ++...+..++.+++.++.+|         |+|      +++.++|+|||.+....... ......++..|++||......
T Consensus        84 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~  162 (244)
T smart00220       84 LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPEVLLGKG  162 (244)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHHHHccCC
Confidence            78999999999999999999         444      55789999999998765432 223446688899999997544


Q ss_pred             CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHh
Q psy6390          77 RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD  156 (197)
Q Consensus        77 ~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (197)
                       ++.++|+|++|++++++++|..||.....................                         .....++..
T Consensus       163 -~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~  216 (244)
T smart00220      163 -YGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP-------------------------PPEWKISPE  216 (244)
T ss_pred             -CCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc-------------------------cccccCCHH
Confidence             788999999999999999999999874333333222211000000                         000115678


Q ss_pred             HHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         157 GLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       157 ~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      +.+++.+||..+|++||++.++++||||
T Consensus       217 ~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      217 AKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             HHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            9999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.85  E-value=1.1e-20  Score=140.63  Aligned_cols=148  Identities=14%  Similarity=0.158  Sum_probs=104.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.|++||         |||+      ++.++|+|||.++.......  ......++..|++||...
T Consensus       126 ~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  205 (296)
T cd05095         126 TISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL  205 (296)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHh
Confidence            477788999999999999999         7774      46679999999876533211  111223467899999887


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh--CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT--RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      ... ++.++|+||+||++|++++  |..||...+..+..............    .     .            ......
T Consensus       206 ~~~-~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~-----~------------~~~~~~  263 (296)
T cd05095         206 LGK-FTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGR----Q-----V------------YLPKPA  263 (296)
T ss_pred             cCC-ccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccc----c-----c------------cCCCCC
Confidence            644 8899999999999999998  77888766655544333221100000    0     0            000113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||+.||++||++.++++
T Consensus       264 ~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         264 LCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             CCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            35678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.85  E-value=1.3e-20  Score=137.33  Aligned_cols=138  Identities=20%  Similarity=0.233  Sum_probs=105.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|++.|++||         |+|      .++.++|+|||.+.......   .....+..|+|||.+.+.
T Consensus        96 ~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~y~~pe~~~~~  172 (254)
T cd05083          96 LVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---DNSKLPVKWTAPEALKHK  172 (254)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC---CCCCCCceecCHHHhccC
Confidence            589999999999999999999         777      44678999999987543221   122345689999998664


Q ss_pred             CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      . ++.++|+||+|++++++++ |..||......+....+......                            .....++
T Consensus       173 ~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  223 (254)
T cd05083         173 K-FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM----------------------------EPPEGCP  223 (254)
T ss_pred             C-cCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC----------------------------CCCCcCC
Confidence            4 8889999999999999997 99999877765554443321000                            0013356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+.+++.+||+.+|.+||++++++.
T Consensus       224 ~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         224 ADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            78999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.85  E-value=1.2e-20  Score=138.55  Aligned_cols=143  Identities=19%  Similarity=0.225  Sum_probs=106.2

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc--cccce---eccceeC
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI--YTHEV---VTLWYRA   68 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~--~~~~~---~~~~y~a   68 (197)
                      ...+++.++..++.|++.|++||         |+|      .+..++|+|||.+.........  .....   .+..|+|
T Consensus       100 ~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~  179 (269)
T cd05065         100 DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTA  179 (269)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecC
Confidence            34589999999999999999999         666      4467899999998765332111  11111   2457999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      ||.+.+.. ++.++|+||+||++|++++ |..||......+....+......+.                          
T Consensus       180 PE~~~~~~-~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~--------------------------  232 (269)
T cd05065         180 PEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPP--------------------------  232 (269)
T ss_pred             HhHhccCc-ccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCC--------------------------
Confidence            99987644 7889999999999999886 9999987776655555432111100                          


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                        ....+..+.+++.+||..+|.+||++++++.
T Consensus       233 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         233 --PMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             --cccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence              1235678899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.85  E-value=1.7e-20  Score=137.07  Aligned_cols=141  Identities=20%  Similarity=0.255  Sum_probs=105.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++...+..++.|++.||+||         |+|      .++.++|+|||.+........ ......++..|+|||.+..
T Consensus        98 ~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  177 (260)
T cd05073          98 KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF  177 (260)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhcc
Confidence            478889999999999999999         666      446789999999876543221 1112334577999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++|+||+||+++++++ |..||...+.......+......                            ......
T Consensus       178 ~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  228 (260)
T cd05073         178 GS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM----------------------------PRPENC  228 (260)
T ss_pred             CC-cCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC----------------------------CCcccC
Confidence            44 7889999999999999998 99999877665555444321100                            001335


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      +..+.+++.+||+.+|++||++.++++
T Consensus       229 ~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         229 PEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            678999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.85  E-value=1.4e-20  Score=138.34  Aligned_cols=141  Identities=17%  Similarity=0.153  Sum_probs=106.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.|++||         |||      ++..++|+|||.++.......  ......++..|++||.+.
T Consensus       109 ~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  188 (273)
T cd05074         109 TLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLA  188 (273)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHh
Confidence            478899999999999999999         666      457789999999886543221  112223467899999987


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++|+||+||++|++++ |..||...+.......+.... ..                           .....
T Consensus       189 ~~~-~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~  239 (273)
T cd05074         189 DNV-YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN-RL---------------------------KQPPD  239 (273)
T ss_pred             cCc-cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC-cC---------------------------CCCCC
Confidence            644 7889999999999999998 889998776655444433210 00                           00023


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||+.+|++||++.++++
T Consensus       240 ~~~~~~~l~~~~l~~~p~~Rps~~~~~~  267 (273)
T cd05074         240 CLEDVYELMCQCWSPEPKCRPSFQHLRD  267 (273)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            5678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG4278|consensus

Probab=99.85  E-value=1.2e-20  Score=146.49  Aligned_cols=143  Identities=20%  Similarity=0.231  Sum_probs=113.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCccccc-cceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIYT-HEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~-~~~~~~~y~aPE~~   72 (197)
                      ...++-..+..++.||.+||+||               |..+|..||++|||+++.+..+....+ ..--+..|.|||.+
T Consensus       359 r~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsL  438 (1157)
T KOG4278|consen  359 RSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL  438 (1157)
T ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccc
Confidence            34577788999999999999999               555888999999999998755433222 12227789999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .-.. ++.++|+|+|||+|||+.+ |..||.+-+....+..+....                            ..+...
T Consensus       439 AyNt-FSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy----------------------------RM~~Pe  489 (1157)
T KOG4278|consen  439 AYNT-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY----------------------------RMDGPE  489 (1157)
T ss_pred             cccc-cccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc----------------------------cccCCC
Confidence            7655 8999999999999999988 999999887766655543311                            123336


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .++....+|++.||+++|+.||+++|+-+
T Consensus       490 GCPpkVYeLMraCW~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  490 GCPPKVYELMRACWNWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             CCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence            68889999999999999999999998753

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.85  E-value=1.8e-20  Score=138.59  Aligned_cols=157  Identities=17%  Similarity=0.173  Sum_probs=104.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc---cccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI---YTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~---~~~~~~~~~y~aPE~   71 (197)
                      ..+++.+++.++.|++.||+||         |||      +++.++|+|||.++........   .....++..|+|||.
T Consensus       102 ~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~  181 (283)
T cd05080         102 HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVEC  181 (283)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhH
Confidence            4699999999999999999999         777      4467899999999866432211   112244667999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.... .+.++|+||+|++++++++|..|+......  ...+......  ............         .........
T Consensus       182 ~~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~  247 (283)
T cd05080         182 LKENK-FSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQG--QMTVVRLIELLE---------RGMRLPCPK  247 (283)
T ss_pred             hcccC-CCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhccccc--ccchhhhhhhhh---------cCCCCCCCC
Confidence            87644 789999999999999999999998654321  1111100000  000000000000         000001123


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||+.+|++|||++++++
T Consensus       248 ~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         248 NCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            46789999999999999999999999884

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.84  E-value=3.2e-20  Score=143.26  Aligned_cols=143  Identities=17%  Similarity=0.226  Sum_probs=106.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .++...+.+++.|++.||+||         |||      ++..++|+|||+++.......  ......++..|+|||.+.
T Consensus       235 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  314 (401)
T cd05107         235 ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF  314 (401)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhc
Confidence            488899999999999999999         676      346789999999976432211  112234578899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++|+||+|++++++++ |..||......+...........+                           .....
T Consensus       315 ~~~-~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~---------------------------~~p~~  366 (401)
T cd05107         315 NNL-YTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRM---------------------------AKPAH  366 (401)
T ss_pred             CCC-CCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCC---------------------------CCCCC
Confidence            644 7899999999999999998 888987765544443332210000                           01133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ++.++.+++.+||+.+|++||+++++++.
T Consensus       367 ~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         367 ASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            57889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG1094|consensus

Probab=99.84  E-value=9.2e-21  Score=145.80  Aligned_cols=147  Identities=15%  Similarity=0.151  Sum_probs=113.1

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCC--CccccccceeccceeCchhhcC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGV--PVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~--~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      +......++++||++||+||               |...+.++||+|||.++.+=+  ......-.+-+.+|||||.+.-
T Consensus       634 ~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsill  713 (807)
T KOG1094|consen  634 AETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILL  713 (807)
T ss_pred             cccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHh
Confidence            35556777999999999999               555889999999999985422  2222222355889999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh--CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT--RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+ +++++|+|++|+++||+++  ...||....+.+.......++.........                     ..++.
T Consensus       714 gk-FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l---------------------~~P~~  771 (807)
T KOG1094|consen  714 GK-FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVL---------------------SRPPA  771 (807)
T ss_pred             cc-ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceec---------------------cCCCc
Confidence            66 9999999999999999977  678998888877777666555544433222                     12255


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ++..+.+++.+||..+.++||+++++..
T Consensus       772 cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  772 CPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             CcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            7788999999999999999999999853

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.84  E-value=3.6e-20  Score=135.98  Aligned_cols=145  Identities=17%  Similarity=0.150  Sum_probs=102.3

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhcC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++..+..++.|++.||+||         |||      +++.+||+|||.+........  ......++..|+|||++..
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (269)
T cd05042          97 AQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEI  176 (269)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhh
Confidence            46778899999999999999         777      446789999999865432211  1122344677999999753


Q ss_pred             ------CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          75 ------SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        75 ------~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                            ...++.++|+||+||++|++++ |..||......+.+.............                       .
T Consensus       177 ~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------------~  233 (269)
T cd05042         177 RGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK-----------------------P  233 (269)
T ss_pred             ccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC-----------------------C
Confidence                  1236789999999999999998 888998777666555543321110000                       0


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ......+....+++..|+ .||++|||++++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         234 QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             cccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            011335677888999888 59999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.84  E-value=2.8e-20  Score=135.71  Aligned_cols=136  Identities=16%  Similarity=0.162  Sum_probs=100.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC------C-------cEEEeecCCccccCCCccccccceeccceeC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS------N-------IVKVADFGLARAFGVPVRIYTHEVVTLWYRA   68 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~-------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~a   68 (197)
                      .+++..+..++.|++.||+||         |||+|      +       .++|+|||.+.....    .....++..|+|
T Consensus        97 ~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~y~a  172 (259)
T cd05037          97 NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS----REERVERIPWIA  172 (259)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc----ccccccCCCccC
Confidence            689999999999999999999         77744      2       589999999876543    122345678999


Q ss_pred             chhhcCC-CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          69 PEVLLGS-QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        69 PE~~~~~-~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      ||.+... ..++.++|+||+|++++++++ |..|+..............    ..  .                      
T Consensus       173 PE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~----~~--~----------------------  224 (259)
T cd05037         173 PECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD----QH--R----------------------  224 (259)
T ss_pred             hhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc----CC--C----------------------
Confidence            9999765 347889999999999999999 5777766543222221110    00  0                      


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                        ........+.+++.+||..+|++|||+.++++
T Consensus       225 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         225 --LPMPDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             --CCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence              00111267889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.84  E-value=5e-20  Score=135.28  Aligned_cols=146  Identities=16%  Similarity=0.133  Sum_probs=101.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+...+..++.|++.|++||         |||      ++..++|+|||.+........  ......++..|+|||++.
T Consensus        96 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  175 (269)
T cd05087          96 TPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVD  175 (269)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhc
Confidence            356677889999999999999         666      446789999999875433221  112234577899999985


Q ss_pred             CCC------CCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          74 GSQ------RYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        74 ~~~------~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      ...      .++.++|+||+|+++|++++ |..||......+.............          ..             
T Consensus       176 ~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------~~-------------  232 (269)
T cd05087         176 EVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKL----------PK-------------  232 (269)
T ss_pred             cccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCC----------CC-------------
Confidence            321      25789999999999999996 9999987665554433221100000          00             


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .......+..+.+++.+|+ .+|++|||+++|+.
T Consensus       233 ~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         233 PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            0001224567889999998 68999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0194|consensus

Probab=99.84  E-value=5.3e-21  Score=146.93  Aligned_cols=141  Identities=21%  Similarity=0.254  Sum_probs=111.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .++..+...++.+.+.||+||               |...+..+||+|||+|+............--+.+|+|||.+...
T Consensus       258 ~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~  337 (474)
T KOG0194|consen  258 SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTG  337 (474)
T ss_pred             CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccC
Confidence            599999999999999999999               33356778999999998664222212133357899999999876


Q ss_pred             CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhh-cCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRV-LTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      . ++.++||||+||++||+++ |..||.+....+...++... ...+.+                            ...
T Consensus       338 ~-~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~----------------------------~~~  388 (474)
T KOG0194|consen  338 I-FSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP----------------------------SKT  388 (474)
T ss_pred             c-cccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC----------------------------CCC
Confidence            4 9999999999999999999 88899999999888888442 111111                            235


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      +..+..++.+|+..||+.|+++.++.+
T Consensus       389 p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  389 PKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHHHHHHHHHhccCChhhccCHHHHHH
Confidence            678889999999999999999998764

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.83  E-value=3.7e-20  Score=137.03  Aligned_cols=158  Identities=16%  Similarity=0.212  Sum_probs=102.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE~   71 (197)
                      ..+++.++..++.|++.||+||         |+|      +++.++|+|||.+........   ......++..|+|||.
T Consensus       104 ~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~  183 (284)
T cd05079         104 NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPEC  183 (284)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHH
Confidence            3589999999999999999999         777      446789999999986643221   1122345678999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++|+||+||++++++++..+......  ..   ....+....+.....        ...............
T Consensus       184 ~~~~~-~~~~~Di~slG~il~ellt~~~~~~~~~~--~~---~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~  249 (284)
T cd05079         184 LIQSK-FYIASDVWSFGVTLYELLTYCDSESSPMT--LF---LKMIGPTHGQMTVTR--------LVRVLEEGKRLPRPP  249 (284)
T ss_pred             hccCC-CCccccchhhhhhhhhhhcCCCCCccccc--hh---hhhcccccccccHHH--------HHHHHHcCccCCCCC
Confidence            87644 78899999999999999997655322110  00   000000000000000        000000000001123


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++..+.+|+.+||+.||.+||++++++++
T Consensus       250 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         250 NCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            467899999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.83  E-value=5e-20  Score=144.58  Aligned_cols=160  Identities=19%  Similarity=0.240  Sum_probs=102.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-cccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-YTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-~~~~~~~~~y~aPE~~~~   74 (197)
                      .++...++.++.|+++||+||         |||      .++.++|+|||++......... .....+++.|+|||.+..
T Consensus       305 ~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~  384 (507)
T PLN03224        305 KRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM  384 (507)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence            356778999999999999999         777      4467899999999765432211 112234789999999853


Q ss_pred             CCC---------------------CCCchhhhhhhHHHHHHHhCCC-CCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC
Q psy6390          75 SQR---------------------YSCPVDVWSIGCIFAEIATRKP-LFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP  132 (197)
Q Consensus        75 ~~~---------------------~~~~~Diws~g~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (197)
                      ...                     ...+.|+||+||++++|+++.. |+..............   . ....|.....  
T Consensus       385 ~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~---~-~~~~~r~~~~--  458 (507)
T PLN03224        385 PQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYD---N-DLNRWRMYKG--  458 (507)
T ss_pred             CCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhcc---c-hHHHHHhhcc--
Confidence            210                     1234799999999999999864 6643221111000000   0 0000000000  


Q ss_pred             CCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCC---CCCCCHHHHhcCcccCC
Q psy6390         133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCP---ATRINAENALKHKYFAD  186 (197)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~R~s~~ell~hp~~~~  186 (197)
                       ....         -..+...+..++||+.+||..+|   .+|+|++|+|+||||..
T Consensus       459 -~~~~---------~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        459 -QKYD---------FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             -cCCC---------cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence             0000         01234578899999999999866   68999999999999965

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.83  E-value=1.4e-19  Score=132.82  Aligned_cols=146  Identities=16%  Similarity=0.197  Sum_probs=101.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|++.||+||         |||      .++.++|+|||.+.......  .......++..|+|||++.
T Consensus        95 ~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  174 (268)
T cd05086          95 NSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVG  174 (268)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcc
Confidence            467778899999999999999         777      44668999999986432211  1122345688999999985


Q ss_pred             CC------CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          74 GS------QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        74 ~~------~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      ..      ..++.++|+||+||++|++++ +..||......+....+........   .         .           
T Consensus       175 ~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~---------~-----------  231 (268)
T cd05086         175 EFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKL---F---------K-----------  231 (268)
T ss_pred             cccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccccc---C---------C-----------
Confidence            31      125678999999999999997 5778877766655555432111000   0         0           


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .......+..+.+++..|| .+|.+||+++++++
T Consensus       232 ~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         232 PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            0001235677889999999 67999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0608|consensus

Probab=99.83  E-value=1e-20  Score=147.03  Aligned_cols=152  Identities=26%  Similarity=0.387  Sum_probs=113.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCcccc---------CCCc-----------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAF---------GVPV-----------   54 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~---------~~~~-----------   54 (197)
                      ..|.|+-++.|+.++..|+++.         |||+      ++++||+|||++.-+         ....           
T Consensus       724 gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~  803 (1034)
T KOG0608|consen  724 GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSP  803 (1034)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCch
Confidence            4599999999999999999998         8884      478899999997543         1000           


Q ss_pred             ----------------------cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHH
Q psy6390          55 ----------------------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFR  112 (197)
Q Consensus        55 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~  112 (197)
                                            ...+..+||+-|+|||++...+ ++..+|.||+||+||+|+.|++||......+.-.+
T Consensus       804 e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g-~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~k  882 (1034)
T KOG0608|consen  804 EWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG-YTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYK  882 (1034)
T ss_pred             hhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC-ccccchhhHhhHHHHHHhhCCCCccCCCCCcceee
Confidence                                  0123458899999999998755 89999999999999999999999988765544433


Q ss_pred             HHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCC---CHHHHhcCcccCCCC
Q psy6390         113 IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI---NAENALKHKYFADKT  188 (197)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---s~~ell~hp~~~~~~  188 (197)
                      ++.         |....                .-..-.++|.++.++|.++ +.+++.|+   .++++..||||+++.
T Consensus       883 v~n---------w~~~l----------------~~~~~~~ls~e~~~li~kL-c~sad~RLGkng~d~vKaHpfFkgID  935 (1034)
T KOG0608|consen  883 VIN---------WRNFL----------------HIPYQGNLSKEALDLIQKL-CCSADSRLGKNGADQVKAHPFFKGID  935 (1034)
T ss_pred             eee---------hhhcc----------------ccccccccCHHHHHHHHHH-hcChhhhhcccchhhhhcCccccccc
Confidence            321         11111                0011145789999999875 56688998   477899999999773

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.83  E-value=6.2e-20  Score=151.07  Aligned_cols=143  Identities=22%  Similarity=0.228  Sum_probs=102.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC------CcEEEeecCCccccCCCc------------------ccc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPV------------------RIY   57 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~~~------------------~~~   57 (197)
                      .++...+..++.||++||+||         |||+|      +.++|+|||+++......                  ...
T Consensus       109 ~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~  188 (932)
T PRK13184        109 KTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIP  188 (932)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccC
Confidence            356677899999999999999         88854      567999999997652110                  001


Q ss_pred             ccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy6390          58 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT  137 (197)
Q Consensus        58 ~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (197)
                      ...+||+.|+|||.+.+.. .+.++|+||+||++++|++|..||............  ....+. .              
T Consensus       189 g~~vGT~~YmAPE~l~g~~-~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~--~i~~P~-~--------------  250 (932)
T PRK13184        189 GKIVGTPDYMAPERLLGVP-ASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRD--VILSPI-E--------------  250 (932)
T ss_pred             CCCCCCCCCCCHHHhcCCC-CCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhh--hccChh-h--------------
Confidence            1236899999999997754 789999999999999999999999775443222111  000000 0              


Q ss_pred             CcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         138 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                               ......++..+.+++.+||..||++|++..+.+.
T Consensus       251 ---------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        251 ---------VAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             ---------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                     0001346788999999999999999987766554

>KOG1027|consensus

Probab=99.82  E-value=4.1e-21  Score=152.47  Aligned_cols=142  Identities=23%  Similarity=0.303  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHhhhccc---------ccCCC-----------CcEEEeecCCccccCCCcc---ccccceeccceeCchh
Q psy6390          15 YQVKITTRLFLQATSFC---------IKPKS-----------NIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPEV   71 (197)
Q Consensus        15 ~~~~~~~~qi~~~l~~l---------lkp~~-----------~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE~   71 (197)
                      ...+..+.|+++||++|         |||.|           ..++|+|||+++.+.....   ...+..||-.|+|||+
T Consensus       606 i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~  685 (903)
T KOG1027|consen  606 IDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQ  685 (903)
T ss_pred             ccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHH
Confidence            45788999999999999         77744           4468999999998755332   2345678999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.... -..++||+|+||++|..++ |..||...-..+.  .|..   ...     .          +     ..++   
T Consensus       686 L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~---~~~-----~----------L-----~~L~---  736 (903)
T KOG1027|consen  686 LREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILT---GNY-----T----------L-----VHLE---  736 (903)
T ss_pred             Hhccc-cCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhc---Ccc-----c----------e-----eeec---
Confidence            98766 4679999999999999988 5899975432221  1111   000     0          0     0000   


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      +....+++|||.+|++.+|..||+|.++|.||+|=
T Consensus       737 ~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  737 PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW  771 (903)
T ss_pred             cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence            11112889999999999999999999999999984

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.82  E-value=2.1e-19  Score=132.29  Aligned_cols=143  Identities=18%  Similarity=0.194  Sum_probs=107.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCC-ccccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVP-VRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~-~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++..+..++.|++.||+||         |+|+      ++.++++|||.+...... ........++..|+|||.+.+
T Consensus       113 ~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  192 (275)
T cd05046         113 PLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE  192 (275)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhcc
Confidence            589999999999999999999         7774      466789999998654322 112233456778999999876


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. .+.++|+||+|++++++++ |..||...........+......     +                      ......
T Consensus       193 ~~-~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~-----~----------------------~~~~~~  244 (275)
T cd05046         193 DD-FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLE-----L----------------------PVPEGC  244 (275)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcC-----C----------------------CCCCCC
Confidence            44 7789999999999999998 88898766655554443211000     0                      001336


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +..+.+++.+||..||++||++.+++++
T Consensus       245 ~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         245 PSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            6789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.82  E-value=1.5e-19  Score=133.76  Aligned_cols=157  Identities=17%  Similarity=0.212  Sum_probs=101.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc---ccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~---~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|++.||+||         |||      +++.++|+|||++..........   ....++..|+|||.
T Consensus       103 ~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  182 (284)
T cd05081         103 ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPES  182 (284)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHH
Confidence            3589999999999999999999         666      44678999999998664322211   11123456999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc-hhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS-NFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  150 (197)
                      +.+.. ++.++|+||+||++++++++..++..... .....+    +.....        ......+.... ........
T Consensus       183 ~~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~----~~~~~~--------~~~~~~~~~~~~~~~~~~~~  248 (284)
T cd05081         183 LTESK-FSVASDVWSFGVVLYELFTYSDKSCSPPA-EFMRMM----GNDKQG--------QMIVYHLIELLKNNGRLPAP  248 (284)
T ss_pred             hccCC-cChHHHHHHHHHHHHHHhhcCCcCCCcch-hhhhhc----cccccc--------ccchHHHHHHHhcCCcCCCC
Confidence            97644 78999999999999999998765433221 111100    000000        00000000000 00000112


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..++..+.+++.+||..+|++|||+.++++
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         249 PGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            446788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.81  E-value=1.9e-19  Score=133.02  Aligned_cols=145  Identities=20%  Similarity=0.290  Sum_probs=102.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc---ccceeccceeCchhh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVL   72 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~---~~~~~~~~y~aPE~~   72 (197)
                      .+++..+..++.|++.||+||         |+|      +++.++|+|||.+..........   ....++..|++||.+
T Consensus       105 ~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~  184 (284)
T cd05038         105 QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECL  184 (284)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHH
Confidence            489999999999999999999         666      45778999999998765322211   112345679999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHH-----------HHHHHhhcCCCCCCCCCCCCCCCCCCCCCccc
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ-----------LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW  141 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (197)
                      .+.. .+.++|+||+|++++++++|..|+........           ...+........                    
T Consensus       185 ~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------  243 (284)
T cd05038         185 RTSK-FSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE--------------------  243 (284)
T ss_pred             ccCC-CCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCC--------------------
Confidence            7654 78899999999999999999988755322110           111111000000                    


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                          ........+..+.+++.+||..+|++|||+.++++
T Consensus       244 ----~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         244 ----RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             ----cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                00001235578999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1167|consensus

Probab=99.80  E-value=1.2e-19  Score=134.49  Aligned_cols=178  Identities=28%  Similarity=0.439  Sum_probs=118.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC-------CcEEEeecCCccccCC----------------C--c-
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS-------NIVKVADFGLARAFGV----------------P--V-   54 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-------~~vkl~Dfg~s~~~~~----------------~--~-   54 (197)
                      ..++..+++.+++.++.||+++         |||.|       +.-.|.|||+|.....                .  . 
T Consensus       127 ~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~  206 (418)
T KOG1167|consen  127 RSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGK  206 (418)
T ss_pred             hcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccC
Confidence            3588999999999999999999         88855       3347999999872100                0  0 


Q ss_pred             -------------------------cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCC-CChHH
Q psy6390          55 -------------------------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQG-DSEID  108 (197)
Q Consensus        55 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~-~~~~~  108 (197)
                                               .......||+.|+|||++...+..++++||||.|+++..+++++.||.. .++.+
T Consensus       207 ~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~  286 (418)
T KOG1167|consen  207 DVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDAD  286 (418)
T ss_pred             cccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccc
Confidence                                     0001235799999999999877789999999999999999999988754 34444


Q ss_pred             HHHHHHhhcCCCCC--------C--CCCC--CCCCCCCCCCCccc-ch---------hhhhhccCCCCHhHHHHHHhhcc
Q psy6390         109 QLFRIFRVLTTPTE--------D--NWPG--VSKLPDYKTTFPEW-SN---------FCLDKHVKNLDQDGLDLLEKTLI  166 (197)
Q Consensus       109 ~~~~~~~~~~~~~~--------~--~~~~--~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~li~~~l~  166 (197)
                      .+.++.-..+...-        .  .|..  +...++....+... ..         ...+......+..+.+|+.+||.
T Consensus       287 al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le  366 (418)
T KOG1167|consen  287 ALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLE  366 (418)
T ss_pred             hHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHcc
Confidence            44444333332110        0  1110  00111111111111 01         11222234456689999999999


Q ss_pred             cCCCCCCCHHHHhcCcccCCC
Q psy6390         167 YCPATRINAENALKHKYFADK  187 (197)
Q Consensus       167 ~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .||.+|+||+++|+||||.+.
T Consensus       367 ~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  367 LNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             CChhhcccHHHHhcCcCCcch
Confidence            999999999999999999854

>KOG1025|consensus

Probab=99.80  E-value=8.1e-19  Score=139.80  Aligned_cols=148  Identities=16%  Similarity=0.182  Sum_probs=115.9

Q ss_pred             hhHHHhhhcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCcccccccee--ccc
Q psy6390           3 NLIQLEWEQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPVRIYTHEVV--TLW   65 (197)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~--~~~   65 (197)
                      +.++....++....+..+.+||++||.||               |..+-.++|++|||+++.............|  .+.
T Consensus       786 Dyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pik  865 (1177)
T KOG1025|consen  786 DYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIK  865 (1177)
T ss_pred             HHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcH
Confidence            34556667899999999999999999999               3334568899999999988766554444333  678


Q ss_pred             eeCchhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchh
Q psy6390          66 YRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF  144 (197)
Q Consensus        66 y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (197)
                      |||-|.+.... +++++||||+||++||+++ |..|+++....+.-..+...    .+                      
T Consensus       866 wmale~i~~~~-~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g----eR----------------------  918 (1177)
T KOG1025|consen  866 WMALESIRIRK-YTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG----ER----------------------  918 (1177)
T ss_pred             HHHHHHhhccC-CCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc----cc----------------------
Confidence            99999997755 9999999999999999998 99999988766554443221    10                      


Q ss_pred             hhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       145 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                        -..++..+.+...++.+||..|+..||+++++.
T Consensus       919 --LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  919 --LSQPPICTIDVYMVMVKCWMIDADSRPTFKELA  951 (1177)
T ss_pred             --CCCCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence              011255788999999999999999999999865

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.79  E-value=5e-19  Score=144.58  Aligned_cols=123  Identities=21%  Similarity=0.291  Sum_probs=93.5

Q ss_pred             cEEEeecCCccccCCCc--cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy6390          38 IVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFR  115 (197)
Q Consensus        38 ~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~  115 (197)
                      .+++.|||.++......  ......+||+.|+|||++.+.. ++.++||||+||++|+|++|..||.+.........+..
T Consensus       516 ~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~-~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~  594 (669)
T cd05610         516 VKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKP-HGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILN  594 (669)
T ss_pred             ccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            45788899887653221  1223458899999999998755 89999999999999999999999988877766665533


Q ss_pred             hcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         116 VLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ....     ++.                     ....++..+.+++.+||..||.+||++.++++||||...
T Consensus       595 ~~~~-----~p~---------------------~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~  640 (669)
T cd05610         595 RDIP-----WPE---------------------GEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGV  640 (669)
T ss_pred             cCCC-----CCc---------------------ccccCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcCC
Confidence            1100     000                     002356788999999999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0590|consensus

Probab=99.79  E-value=7.8e-20  Score=146.27  Aligned_cols=158  Identities=22%  Similarity=0.271  Sum_probs=118.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc----cccccceeccceeCchh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV----RIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~----~~~~~~~~~~~y~aPE~   71 (197)
                      .++..++..++.|++.|++|+         +|+      .++.+||+|||.+..+....    ......+|+-.|+|||+
T Consensus       416 ~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~  495 (601)
T KOG0590|consen  416 KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEV  495 (601)
T ss_pred             ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCccc
Confidence            588999999999999999999         666      55688999999998764422    34456788999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +..........||||.|+++..|..|+.||......+....-....                    ..............
T Consensus       496 ~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~  555 (601)
T KOG0590|consen  496 LTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYS--------------------DQRNIFEGPNRLLS  555 (601)
T ss_pred             ccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccc--------------------cccccccChHHHHH
Confidence            9886644567999999999999999999997654433321000000                    00000111223335


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ..+...+.+|.+||+.||.+|.|+++|++.+||+.+.
T Consensus       556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  556 LLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             hchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            5678889999999999999999999999999999774

>KOG1024|consensus

Probab=99.76  E-value=7.2e-18  Score=124.71  Aligned_cols=142  Identities=18%  Similarity=0.165  Sum_probs=109.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------------ccCCCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------------IKPKSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------------lkp~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      +.++..++-.++.|++.|++||               +-.+.-.|||+|=.+|+.+-+..  ......-.+..||+||.+
T Consensus       391 qtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal  470 (563)
T KOG1024|consen  391 QTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEAL  470 (563)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHH
Confidence            4688899999999999999999               22355678999999998653322  222334558899999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .... |+.++|+|||||++|||++ |+.|+..-++.+...-+...-.-                            ..+-
T Consensus       471 ~n~~-yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRl----------------------------aQP~  521 (563)
T KOG1024|consen  471 QNSH-YSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRL----------------------------AQPF  521 (563)
T ss_pred             hhhh-hcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcccee----------------------------cCCC
Confidence            8756 9999999999999999998 99999887766554443321100                            1114


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      +++.++..++.-||...|++||+.+|+..
T Consensus       522 NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  522 NCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             CCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            47889999999999999999999999865

>KOG1187|consensus

Probab=99.75  E-value=6.6e-18  Score=128.16  Aligned_cols=156  Identities=18%  Similarity=0.131  Sum_probs=101.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc------------ccC------CCCcEEEeecCCccccCCCccccccc-eeccceeCchh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC------------IKP------KSNIVKVADFGLARAFGVPVRIYTHE-VVTLWYRAPEV   71 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l------------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~-~~~~~y~aPE~   71 (197)
                      .++.....+|+.++|+||+||            ||+      ++...||+|||+|+..+......... .||..|++||.
T Consensus       170 ~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy  249 (361)
T KOG1187|consen  170 PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEY  249 (361)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhh
Confidence            678999999999999999999            444      67888999999997665411112222 78999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC--hHHHHHH-HHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS--EIDQLFR-IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ..... .+.++||||+|+++.|+++|+.+.+...  ....+.. ....+...      ......+..-........    
T Consensus       250 ~~~g~-lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~------~~~eiiD~~l~~~~~~~~----  318 (361)
T KOG1187|consen  250 ASTGK-LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG------KLREIVDPRLKEGEYPDE----  318 (361)
T ss_pred             hccCC-cCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc------chhheeCCCccCCCCChH----
Confidence            97744 8899999999999999999998776432  1111111 11111110      001111100000000000    


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                         ..-..+..+..+|++.+|+.||++.|+++
T Consensus       319 ---~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  319 ---KEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             ---HHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence               01123678889999999999999999753

>KOG3653|consensus

Probab=99.75  E-value=9.2e-19  Score=131.67  Aligned_cols=163  Identities=20%  Similarity=0.133  Sum_probs=100.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc------------------ccC------CCCcEEEeecCCccccCCC--ccccccceec
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC------------------IKP------KSNIVKVADFGLARAFGVP--VRIYTHEVVT   63 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l------------------lkp------~~~~vkl~Dfg~s~~~~~~--~~~~~~~~~~   63 (197)
                      ..++...+++++..++.||+||                  ||.      ++.++-|+|||+|..+...  .......+||
T Consensus       302 ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT  381 (534)
T KOG3653|consen  302 NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGT  381 (534)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhh
Confidence            3588999999999999999999                  333      4455679999999887542  2234458999


Q ss_pred             cceeCchhhcCCCCCC-----CchhhhhhhHHHHHHHhCCCCCC-CCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q psy6390          64 LWYRAPEVLLGSQRYS-----CPVDVWSIGCIFAEIATRKPLFQ-GDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT  137 (197)
Q Consensus        64 ~~y~aPE~~~~~~~~~-----~~~Diws~g~~l~~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (197)
                      .+|||||++-+..++.     .+.||||+|.++||++++...+. +..+.-.+..-.++...|..+.+.......   +.
T Consensus       382 ~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~k---K~  458 (534)
T KOG3653|consen  382 RRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRK---KQ  458 (534)
T ss_pred             hhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhh---cc
Confidence            9999999997654443     47999999999999999654332 211111111111111111111111111011   11


Q ss_pred             CcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHH
Q psy6390         138 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA  178 (197)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~el  178 (197)
                      .+.+......   ......+.+.+..||+.||+.|+||.-+
T Consensus       459 RP~~p~~W~~---h~~~~~l~et~EeCWDhDaeARLTA~Cv  496 (534)
T KOG3653|consen  459 RPKIPDAWRK---HAGMAVLCETIEECWDHDAEARLTAGCV  496 (534)
T ss_pred             CCCChhhhhc---CccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence            1111111111   1233568899999999999999998753

>KOG4250|consensus

Probab=99.75  E-value=1.4e-18  Score=136.20  Aligned_cols=161  Identities=21%  Similarity=0.247  Sum_probs=109.0

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccCCCCc----------EEEeecCCccccCCCccccccceeccceeC
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKPKSNI----------VKVADFGLARAFGVPVRIYTHEVVTLWYRA   68 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~----------vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~a   68 (197)
                      +.++|+|.+++.++.++..||.||         |||.|+.          .||+|||.|+.+++.. .....+||..|.+
T Consensus       113 N~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s-~~~S~vGT~~YLh  191 (732)
T KOG4250|consen  113 NAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS-LFTSLVGTEEYLH  191 (732)
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC-eeeeecCchhhcC
Confidence            346899999999999999999999         8996543          3999999999887765 4556799999999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHH-hhcCCCCCC----CCCCCCCCCCCCCCCcccch
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF-RVLTTPTED----NWPGVSKLPDYKTTFPEWSN  143 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  143 (197)
                      ||++.....++..+|.||+||++|+..+|..||...........+. ......+..    ..+.......++..++--. 
T Consensus       192 Pel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~-  270 (732)
T KOG4250|consen  192 PELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPN-  270 (732)
T ss_pred             hHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcc-
Confidence            9999854668999999999999999999999996543322111111 111111111    1111112222333333211 


Q ss_pred             hhhhhccCCCCHhHHHHHHhhcccCCCCCCC
Q psy6390         144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRIN  174 (197)
Q Consensus       144 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s  174 (197)
                          ...+.....+..++..||..+|++|..
T Consensus       271 ----~Ls~~l~~~~~kwLa~~L~~~~~~~~~  297 (732)
T KOG4250|consen  271 ----HLSRGLATRLTKWLASMLEWNPRKRGH  297 (732)
T ss_pred             ----cccHHHHhhhhHHHHHHHhhhHHHhCC
Confidence                011122234567889999999999983

>KOG0984|consensus

Probab=99.74  E-value=4.9e-18  Score=115.68  Aligned_cols=105  Identities=24%  Similarity=0.336  Sum_probs=85.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccCCC------CcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp~~------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++|.-+-+++..++.||.||          +||+|      +.||+||||+|..+.++. ..+...|...|||||.+.
T Consensus       143 ~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi-Akt~daGCkpYmaPEri~  221 (282)
T KOG0984|consen  143 GTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI-AKTMDAGCKPYMAPERIN  221 (282)
T ss_pred             CcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh-HHHHhcCCCccCChhhcC
Confidence            4699999999999999999999          88854      778999999998775542 233467889999999985


Q ss_pred             C---CCCCCCchhhhhhhHHHHHHHhCCCCCCCCC-hHHHHHHHHh
Q psy6390          74 G---SQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-EIDQLFRIFR  115 (197)
Q Consensus        74 ~---~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~-~~~~~~~~~~  115 (197)
                      .   ...|+-++||||+|+++.||.+++.||..+. +.+++..+..
T Consensus       222 ~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  222 PELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             cccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence            3   2348899999999999999999999998864 4455555543

>KOG0576|consensus

Probab=99.73  E-value=7.8e-18  Score=131.46  Aligned_cols=155  Identities=22%  Similarity=0.304  Sum_probs=121.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc-
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL-   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~-   73 (197)
                      ..++|.++....++.++|++||         ||.      +.+-+|++|||.+..++-........+||+.|||||+-. 
T Consensus       107 gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaav  186 (829)
T KOG0576|consen  107 GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAV  186 (829)
T ss_pred             ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHH
Confidence            3689999999999999999999         444      668899999999987765444455679999999999863 


Q ss_pred             -CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 -GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 -~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                       ....|...+|+|++|++..++-..++|.....+...+..+....-.++.-                        +....
T Consensus       187 erkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l------------------------kDk~k  242 (829)
T KOG0576|consen  187 ERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL------------------------KDKTK  242 (829)
T ss_pred             HhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc------------------------cCCcc
Confidence             23448899999999999999988888877777777776665433332210                        11122


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      -++.+.+|++.+|-.||++||+++.+|+|||+.+..
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l  278 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTL  278 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhheeceeeccch
Confidence            457889999999999999999999999999987653

>KOG2052|consensus

Probab=99.68  E-value=1.6e-16  Score=119.04  Aligned_cols=152  Identities=21%  Similarity=0.199  Sum_probs=98.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-----------------ccC------CCCcEEEeecCCccccCCCcc----cccccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-----------------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVV   62 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-----------------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~   62 (197)
                      .+++...+.+++..+++||+||                 ||.      +|+.+-|+|+|+|-.......    .....+|
T Consensus       303 ~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVG  382 (513)
T KOG2052|consen  303 NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVG  382 (513)
T ss_pred             ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccc
Confidence            5699999999999999999999                 555      556667999999976544322    2345689


Q ss_pred             ccceeCchhhcCCCC---C-C-CchhhhhhhHHHHHHHhC----------CCCCCCCChHHH-HHHHHhhcCCCCCCCCC
Q psy6390          63 TLWYRAPEVLLGSQR---Y-S-CPVDVWSIGCIFAEIATR----------KPLFQGDSEIDQ-LFRIFRVLTTPTEDNWP  126 (197)
Q Consensus        63 ~~~y~aPE~~~~~~~---~-~-~~~Diws~g~~l~~ll~~----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  126 (197)
                      |.+|||||++...-+   + + ..+||||||.|+||+..+          ++||....+.+. ...|.+           
T Consensus       383 TKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrk-----------  451 (513)
T KOG2052|consen  383 TKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRK-----------  451 (513)
T ss_pred             eeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhc-----------
Confidence            999999999964322   1 1 469999999999999763          244433222111 111211           


Q ss_pred             CCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         127 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                       ........+..+.....      ...-..+..+++.||..||.-|.||-.+-
T Consensus       452 -VVCv~~~RP~ipnrW~s------~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  452 -VVCVQKLRPNIPNRWKS------DPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             -ceeecccCCCCCccccc------CHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence             11111112211111100      00113567899999999999999988764

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.67  E-value=4e-16  Score=132.88  Aligned_cols=152  Identities=18%  Similarity=0.186  Sum_probs=92.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc------------ccCCCCc------EEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC------------IKPKSNI------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l------------lkp~~~~------vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .++.....+++.|+++|++||            +||+|..      .++. +|.+.....    .....++..|+|||++
T Consensus       776 ~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----~~~~~~t~~y~aPE~~  850 (968)
T PLN00113        776 NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----DTKCFISSAYVAPETR  850 (968)
T ss_pred             cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----CCCccccccccCcccc
Confidence            488899999999999999999            5554422      2332 444332211    1223668899999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH-HHHHHHHhhcC-CCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI-DQLFRIFRVLT-TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .+.. ++.++||||+||++||+++|+.||...... .......+... ......+..    +.......         ..
T Consensus       851 ~~~~-~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---------~~  916 (968)
T PLN00113        851 ETKD-ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWID----PSIRGDVS---------VN  916 (968)
T ss_pred             cCCC-CCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeC----ccccCCCC---------cc
Confidence            7644 899999999999999999999998542110 01111111000 000000000    00000000         00


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .....++.+++.+||+.||++|||++|+++.
T Consensus       917 ~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        917 QNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            0112356789999999999999999999864

>KOG0606|consensus

Probab=99.62  E-value=7e-16  Score=126.12  Aligned_cols=140  Identities=26%  Similarity=0.357  Sum_probs=109.6

Q ss_pred             HHhhhccc---------ccCCC------CcEEEeecCCccccCCCcc---------------ccccceeccceeCchhhc
Q psy6390          24 FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVR---------------IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        24 i~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~~~~---------------~~~~~~~~~~y~aPE~~~   73 (197)
                      ++.+++||         +||+|      +++|++|||+++.......               .....+||+.|.|||++.
T Consensus       152 mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil  231 (1205)
T KOG0606|consen  152 MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL  231 (1205)
T ss_pred             hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh
Confidence            36778999         77766      6679999999986532110               112358899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      ..+ |+..+|.|++|+++|+++.|..||.+....+.+...+......++.                          ....
T Consensus       232 rqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~--------------------------dea~  284 (1205)
T KOG0606|consen  232 RQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE--------------------------DEAL  284 (1205)
T ss_pred             hhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc--------------------------CcCC
Confidence            755 9999999999999999999999999999988887776543332211                          2456


Q ss_pred             CHhHHHHHHhhcccCCCCCC---CHHHHhcCcccCCCCCc
Q psy6390         154 DQDGLDLLEKTLIYCPATRI---NAENALKHKYFADKTDL  190 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~---s~~ell~hp~~~~~~~~  190 (197)
                      ..++.+++.++|+.+|-.|.   .+-++.+|+||+.++-.
T Consensus       285 p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~  324 (1205)
T KOG0606|consen  285 PPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK  324 (1205)
T ss_pred             CHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence            78999999999999999998   45678899999977543

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.57  E-value=1.7e-14  Score=101.46  Aligned_cols=112  Identities=33%  Similarity=0.485  Sum_probs=92.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------C-CCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------K-SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~-~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++...+..++.++++++++|         |+|      . +..++|+|||.+..............+...|++||.+..
T Consensus        88 ~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  167 (215)
T cd00180          88 KLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLG  167 (215)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcc
Confidence            589999999999999999999         455      3 578999999999766543222333456788999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ....+.+.|+|++|++++++                                                            
T Consensus       168 ~~~~~~~~D~~~lg~~~~~l------------------------------------------------------------  187 (215)
T cd00180         168 KGYYSEKSDIWSLGVILYEL------------------------------------------------------------  187 (215)
T ss_pred             cCCCCchhhhHHHHHHHHHH------------------------------------------------------------
Confidence            52478899999999999998                                                            


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHK  182 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp  182 (197)
                      ..+.+++.+|++.||++||+++++++|+
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence            2556899999999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0603|consensus

Probab=99.56  E-value=3.8e-15  Score=116.03  Aligned_cols=138  Identities=24%  Similarity=0.343  Sum_probs=109.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++...+.+...++-|++++         +|+      .+|++++.|||.++..-....    .+||..|||||++.+ 
T Consensus        93 ~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~----~cgt~eymApEI~~g-  167 (612)
T KOG0603|consen   93 MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI----ACGTYEYRAPEIING-  167 (612)
T ss_pred             chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh----cccchhhhhhHhhhc-
Confidence            477888899999999999999         545      568899999999987643322    288999999999983 


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                        ....+|+||+|++.+++++|..||.+    +...+|...-...                             ....+.
T Consensus       168 --h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~-----------------------------p~~l~~  212 (612)
T KOG0603|consen  168 --HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEM-----------------------------PRELSA  212 (612)
T ss_pred             --cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCC-----------------------------chhhhH
Confidence              56889999999999999999999987    4444443311111                             134677


Q ss_pred             hHHHHHHhhcccCCCCCCCH-----HHHhcCcccCCCC
Q psy6390         156 DGLDLLEKTLIYCPATRINA-----ENALKHKYFADKT  188 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~-----~ell~hp~~~~~~  188 (197)
                      .+.+++..|+..+|.+|...     .|+++|+||+.++
T Consensus       213 ~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~  250 (612)
T KOG0603|consen  213 EARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSID  250 (612)
T ss_pred             HHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeee
Confidence            89999999999999999954     6899999998763

>KOG0195|consensus

Probab=99.55  E-value=3.3e-14  Score=101.21  Aligned_cols=141  Identities=16%  Similarity=0.124  Sum_probs=96.8

Q ss_pred             CCHHHHHHHHHHHHhhhccc--cc---C----CCCcEEEeecCCccccCCCccccc---cceeccceeCchhhcCCCCC-
Q psy6390          12 VGTYQVKITTRLFLQATSFC--IK---P----KSNIVKVADFGLARAFGVPVRIYT---HEVVTLWYRAPEVLLGSQRY-   78 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l--lk---p----~~~~vkl~Dfg~s~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~-   78 (197)
                      ++..++.+++.+++.|++||  +.   |    +..+|.|-+=-.++...-+.....   ...-.+.||+||.+...+.. 
T Consensus       286 vd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawmspealqrkped~  365 (448)
T KOG0195|consen  286 VDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDL  365 (448)
T ss_pred             EecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCCHHHHhcCchhc
Confidence            66788999999999999999  32   2    333443332222222111111111   22337899999999754322 


Q ss_pred             -CCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhH
Q psy6390          79 -SCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG  157 (197)
Q Consensus        79 -~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (197)
                       -.++|+|||++++||+.++..||...++.+.--++--.                .           .....++.++...
T Consensus       366 n~raadmwsfaillwel~trevpfadlspmecgmkiale----------------g-----------lrv~ippgis~hm  418 (448)
T KOG0195|consen  366 NIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE----------------G-----------LRVHIPPGISRHM  418 (448)
T ss_pred             chhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc----------------c-----------ccccCCCCccHHH
Confidence             25799999999999999999999988877665444210                0           0113347788999


Q ss_pred             HHHHHhhcccCCCCCCCHHHHh
Q psy6390         158 LDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       158 ~~li~~~l~~~p~~R~s~~ell  179 (197)
                      ..|+.-|++.||.+||.+..++
T Consensus       419 ~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  419 NKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             HHHHHHHhcCCCCcCCCcceeh
Confidence            9999999999999999988765

>KOG1033|consensus

Probab=99.45  E-value=8.6e-14  Score=106.61  Aligned_cols=144  Identities=26%  Similarity=0.360  Sum_probs=98.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc------ccC------CCCcEEEeecCCccccCCCc------cccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC------IKP------KSNIVKVADFGLARAFGVPV------RIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l------lkp------~~~~vkl~Dfg~s~~~~~~~------~~~~~~~~~~~y~aPE~   71 (197)
                      .+-+...+..++.|++.|++|=      +||      .+..+||+|||+........      ...+..+||..||+||.
T Consensus       354 e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQ  433 (516)
T KOG1033|consen  354 EERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQ  433 (516)
T ss_pred             cccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHH
Confidence            3466778889999999999753      666      34558999999976543322      23456789999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. |+.++||||||+++++++. -...++    .......++.      +.++     +.+                
T Consensus       434 i~g~~-y~~kvdIyaLGlil~EL~~~f~T~~e----r~~t~~d~r~------g~ip-----~~~----------------  481 (516)
T KOG1033|consen  434 IRGQQ-YSEKVDIYALGLILAELLIQFSTQFE----RIATLTDIRD------GIIP-----PEF----------------  481 (516)
T ss_pred             Hhhhh-hhhhcchhhHHHHHHHHHHHhccHHH----HHHhhhhhhc------CCCC-----hHH----------------
Confidence            98855 9999999999999999987 222221    1111111110      0000     000                


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      ..--..-..|+..|+...|.+||++.+.--|+|.+
T Consensus       482 ~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~~  516 (516)
T KOG1033|consen  482 LQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFLQ  516 (516)
T ss_pred             hhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence            00113456899999999999999988888888753

>KOG1152|consensus

Probab=99.44  E-value=6.5e-14  Score=108.46  Aligned_cols=91  Identities=25%  Similarity=0.378  Sum_probs=76.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++|.+++.++.|++.|+++|         ||.      .|+.+||+|||.|....+.-  ....+||..|.|||++.+
T Consensus       665 p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgp--fd~f~gtv~~aapevl~g  742 (772)
T KOG1152|consen  665 PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGP--FDVFVGTVDYAAPEVLGG  742 (772)
T ss_pred             CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCCC--cceeeeeccccchhhhCC
Confidence            3599999999999999999999         554      77889999999997654432  335689999999999998


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQ  102 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~  102 (197)
                      .+..+...|||++|+++|.+.....||-
T Consensus       743 ~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  743 EKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             CccCCCcchhhhhhheeeEEEeccCCCc
Confidence            8877888999999999999888777763

>KOG1345|consensus

Probab=99.44  E-value=1.4e-13  Score=97.87  Aligned_cols=150  Identities=26%  Similarity=0.310  Sum_probs=102.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC--------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP--------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp--------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .++.|...+.++.|+++|+.|+         ||-        +...|||||||.++..+........   +..|.+||.+
T Consensus       116 ~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~---~~~y~~pe~~  192 (378)
T KOG1345|consen  116 AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEY---VNNYHAPELC  192 (378)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhhhh---hcccCCcHHH
Confidence            5689999999999999999999         444        3356799999999876654332222   4568899987


Q ss_pred             cCCCC----CCCchhhhhhhHHHHHHHhCCCCCCCCChHHH-HHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          73 LGSQR----YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ-LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        73 ~~~~~----~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      ....+    ..+.+|+|.+|++++..++|..|++.....+. ..+...-.+...                      ....
T Consensus       193 ~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~----------------------~~~P  250 (378)
T KOG1345|consen  193 DTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN----------------------PALP  250 (378)
T ss_pred             hhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC----------------------ccCc
Confidence            53222    45789999999999999999999985432222 222222111110                      0112


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCC---CCHHHHhcCccc
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATR---INAENALKHKYF  184 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R---~s~~ell~hp~~  184 (197)
                      +.....++.+..+.++-|..+++.|   .+++.-...-|.
T Consensus       251 ~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~  290 (378)
T KOG1345|consen  251 KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK  290 (378)
T ss_pred             hhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence            2234467888899999999999999   555555555664

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.37  E-value=3.8e-12  Score=90.66  Aligned_cols=103  Identities=32%  Similarity=0.455  Sum_probs=78.6

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhcCC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      +++..+..++.+++.++.+|         ++|      .+..++|+|||.+....... .......++..|++||.+...
T Consensus        95 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  174 (225)
T smart00221       95 LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGG  174 (225)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCC
Confidence            88999999999999999998         444      45889999999988765432 112334667889999998433


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCC-CChH-HHHHHHH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQG-DSEI-DQLFRIF  114 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~-~~~~-~~~~~~~  114 (197)
                      ..++.++|+|++|++++++++|+.||.. .+.. .....+.
T Consensus       175 ~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~  215 (225)
T smart00221      175 KGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS  215 (225)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence            4477899999999999999999999977 3333 4444444

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1023|consensus

Probab=99.35  E-value=2.5e-12  Score=99.78  Aligned_cols=148  Identities=20%  Similarity=0.261  Sum_probs=98.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------cc------CCCCcEEEeecCCccccCC--CccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IK------PKSNIVKVADFGLARAFGV--PVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lk------p~~~~vkl~Dfg~s~~~~~--~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..++..-...++++|+.||+||          ++      ..+..+||+|||+......  .........-...|.|||.
T Consensus        43 ~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPel  122 (484)
T KOG1023|consen   43 IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPEL  122 (484)
T ss_pred             cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHH
Confidence            3567777888999999999999          33      3556679999999876532  1111122234678999999


Q ss_pred             hcCCC--C----CCCchhhhhhhHHHHHHHhCCCCCCCCC----hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCccc
Q psy6390          72 LLGSQ--R----YSCPVDVWSIGCIFAEIATRKPLFQGDS----EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW  141 (197)
Q Consensus        72 ~~~~~--~----~~~~~Diws~g~~l~~ll~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (197)
                      +....  .    .+.+.|+||+|++++++++...||....    ..+...++......+.+   +...            
T Consensus       123 lr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~r---P~i~------------  187 (484)
T KOG1023|consen  123 LRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFR---PSIE------------  187 (484)
T ss_pred             hcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcC---cchh------------
Confidence            96531  1    4678999999999999999999997632    22233333221111110   0000            


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                       ..      .....++..++..||..+|+.||+++++-
T Consensus       188 -~~------~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  188 -LL------NELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             -hh------hhcchHHHHHHHHhcccChhhCccHHHHH
Confidence             00      02334788999999999999999999864

>KOG1240|consensus

Probab=99.31  E-value=6.4e-12  Score=103.98  Aligned_cols=142  Identities=24%  Similarity=0.342  Sum_probs=95.6

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccCCCCcE------EEeecCCcccc----CCCccc---cccceeccceeCc
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAF----GVPVRI---YTHEVVTLWYRAP   69 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp~~~~v------kl~Dfg~s~~~----~~~~~~---~~~~~~~~~y~aP   69 (197)
                      +...+.+.|+-|+++||.-+         ||.+|..+      .|+||..-+..    +++.+.   ..+...-..|.||
T Consensus       117 L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAP  196 (1431)
T KOG1240|consen  117 LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAP  196 (1431)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecCh
Confidence            56778899999999999988         77777554      69999876542    112221   1222334689999


Q ss_pred             hhhcCC---------CC-CCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy6390          70 EVLLGS---------QR-YSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF  138 (197)
Q Consensus        70 E~~~~~---------~~-~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (197)
                      |.+...         .+ .+++.||+|+||++.|++. |+++|.-.    ++-...+   .                  .
T Consensus       197 ERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----QL~aYr~---~------------------~  251 (1431)
T KOG1240|consen  197 ERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----QLLAYRS---G------------------N  251 (1431)
T ss_pred             HhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----HHHhHhc---c------------------C
Confidence            998541         11 5678999999999999988 89998622    1111110   0                  0


Q ss_pred             cccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         139 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ....+..+++.   -+...+.++..|++.||++|.+|++.|+.
T Consensus       252 ~~~~e~~Le~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  252 ADDPEQLLEKI---EDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ccCHHHHHHhC---cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            00111112221   23478899999999999999999998875

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.25  E-value=2.3e-10  Score=85.53  Aligned_cols=156  Identities=31%  Similarity=0.488  Sum_probs=111.5

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCC-cEEEeecCCccccCCCcc------ccccceeccceeC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSN-IVKVADFGLARAFGVPVR------IYTHEVVTLWYRA   68 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~-~vkl~Dfg~s~~~~~~~~------~~~~~~~~~~y~a   68 (197)
                      .+++..+..++.|++.++.|+         +||      .+. .++++|||.++.......      ......++..|++
T Consensus        97 ~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~  176 (384)
T COG0515          97 PLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA  176 (384)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCC
Confidence            589999999999999999888         666      334 689999999986544321      2356688999999


Q ss_pred             chhhcCC--CCCCCchhhhhhhHHHHHHHhCCCCCCCCCh---HHHHHHHHhhcCCC-CCCCCCCCCCCCCCCCCCcccc
Q psy6390          69 PEVLLGS--QRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---IDQLFRIFRVLTTP-TEDNWPGVSKLPDYKTTFPEWS  142 (197)
Q Consensus        69 PE~~~~~--~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  142 (197)
                      ||.+.+.  ...+...|+|++|+++++++.+..||.....   .............+ .....         .....   
T Consensus       177 pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~---  244 (384)
T COG0515         177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL---------SPSNP---  244 (384)
T ss_pred             HHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccccccc---------Ccccc---
Confidence            9999873  3478899999999999999999999877664   23333332222211 00000         00000   


Q ss_pred             hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       143 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                              ........+++.+++..+|..|.+..+...+++...
T Consensus       245 --------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         245 --------ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             --------chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence                    122357889999999999999999999888876653

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.17  E-value=1.1e-11  Score=90.64  Aligned_cols=122  Identities=17%  Similarity=0.182  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC----
Q psy6390          15 YQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS----   75 (197)
Q Consensus        15 ~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~----   75 (197)
                      ..-..+..|+++.+++|         |+|      +++.+.|+||+.....+.....   ...+..|.|||.....    
T Consensus       145 ~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~---~~~~~~~~PPe~~~~~~~~~  221 (288)
T PF14531_consen  145 AARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC---SEFPVAFTPPELESCAGQFG  221 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG---GGS-TTTS-HHHHHHHTSCH
T ss_pred             HHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeec---cCCCcccCChhhhhhhcccC
Confidence            33455668899988888         555      6789999999887655432221   3345789999987432    


Q ss_pred             ---CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          76 ---QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        76 ---~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                         ..++.+.|.|++|+++|.+.++..||...........                                ..... .+
T Consensus       222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~--------------------------------~f~~C-~~  268 (288)
T PF14531_consen  222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW--------------------------------DFSRC-RD  268 (288)
T ss_dssp             HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG--------------------------------GGTTS-S-
T ss_pred             cccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc--------------------------------cchhc-CC
Confidence               2367899999999999999999999975532100000                                11122 25


Q ss_pred             CCHhHHHHHHhhcccCCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATR  172 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R  172 (197)
                      +++..++||.+||+.||.+|
T Consensus       269 ~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  269 MPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             --HHHHHHHHHHT-SSGGGS
T ss_pred             cCHHHHHHHHHHccCCcccC
Confidence            78899999999999999988

>KOG4158|consensus

Probab=99.13  E-value=4.5e-10  Score=84.34  Aligned_cols=153  Identities=19%  Similarity=0.154  Sum_probs=98.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCCCc----------EEEeecCCccccCC-----C-ccccccceeccc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKSNI----------VKVADFGLARAFGV-----P-VRIYTHEVVTLW   65 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~----------vkl~Dfg~s~~~~~-----~-~~~~~~~~~~~~   65 (197)
                      ..+.-..+-++.|+++|+.||         +|.+|..          +.++|||.+---..     + .......-|.-.
T Consensus       337 ~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~  416 (598)
T KOG4158|consen  337 HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAK  416 (598)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcce
Confidence            456667788999999999999         6665544          47999998643221     1 011112234567


Q ss_pred             eeCchhhcCCCCC-----CCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcc
Q psy6390          66 YRAPEVLLGSQRY-----SCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE  140 (197)
Q Consensus        66 y~aPE~~~~~~~~-----~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (197)
                      -||||+....+..     -.++|.|++|.+.||++....||-+......-.+..+                         
T Consensus       417 lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq-------------------------  471 (598)
T KOG4158|consen  417 LMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ-------------------------  471 (598)
T ss_pred             ecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh-------------------------
Confidence            7999998643321     1489999999999999999999866322111000000                         


Q ss_pred             cchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHH---HHhc------CcccCCCCCc
Q psy6390         141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE---NALK------HKYFADKTDL  190 (197)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~---ell~------hp~~~~~~~~  190 (197)
                        ...+......++..+++++..+|+.||++|++..   .+++      |.|+++.+..
T Consensus       472 --e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~~~~vka~~~~  528 (598)
T KOG4158|consen  472 --ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRMGEDVKAMMEK  528 (598)
T ss_pred             --hhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHHhcCchHHHHhccc
Confidence              0001112244778999999999999999999844   4443      5566655543

>KOG0590|consensus

Probab=98.98  E-value=1.6e-10  Score=93.27  Aligned_cols=152  Identities=25%  Similarity=0.321  Sum_probs=112.5

Q ss_pred             cCCHHHHHHHHHHHHhhhccc----------ccC------CCC-cEEEeecCCccccCC-Cc--ccccccee-ccceeCc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC----------IKP------KSN-IVKVADFGLARAFGV-PV--RIYTHEVV-TLWYRAP   69 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~-~vkl~Dfg~s~~~~~-~~--~~~~~~~~-~~~y~aP   69 (197)
                      ..+...+-.++.|+.+|+.|+          ++|      .++ .++++|||+|..+.. ..  ......+| ++.|+||
T Consensus       119 ~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~  198 (601)
T KOG0590|consen  119 GTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAP  198 (601)
T ss_pred             CCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCc
Confidence            467778889999999999999          666      345 789999999987755 22  22334577 9999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      |...+.....+..|+||.|+++..+++|..|+......+....                 .+....       .......
T Consensus       199 E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~-----------------~~~~~~-------~~~~~~~  254 (601)
T KOG0590|consen  199 EHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS-----------------SWKSNK-------GRFTQLP  254 (601)
T ss_pred             ccccchhhcCCCcccccccccccccccCCCCccccccccccce-----------------eecccc-------cccccCc
Confidence            9998754467889999999999999999998876544331100                 000000       0001122


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      +..++....+++.+++..+|..|.+.+++..+||+..
T Consensus       255 ~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  255 WNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cccCChhhhhcccccccCCchhccccccccccccccc
Confidence            2456778889999999999999999999999999987

>KOG1164|consensus

Probab=98.86  E-value=4.6e-08  Score=73.91  Aligned_cols=100  Identities=23%  Similarity=0.128  Sum_probs=78.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-------CC----CcEEEeecCCcc--ccCCCc--------ccccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-------KS----NIVKVADFGLAR--AFGVPV--------RIYTH   59 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~----~~vkl~Dfg~s~--~~~~~~--------~~~~~   59 (197)
                      +.++...+..++.|++.+|+++         |||       ..    ..+.|.|||+++  ......        .....
T Consensus       117 ~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~  196 (322)
T KOG1164|consen  117 GRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGL  196 (322)
T ss_pred             CCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccC
Confidence            6799999999999999999988         777       21    468999999998  321111        00123


Q ss_pred             ceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHH
Q psy6390          60 EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL  110 (197)
Q Consensus        60 ~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~  110 (197)
                      ..||.+|.++....+.. .+.+-|+||++.++.+++.|..|+.+.......
T Consensus       197 ~rGT~ry~S~~~H~~~e-~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~  246 (322)
T KOG1164|consen  197 FRGTLRYASINVHLGIE-QGRRDDLESLFYMLLELLKGSLPWEALEMTDLK  246 (322)
T ss_pred             CCCccccccHHHhCCCc-cCCchhhhhHHHHHHHHhcCCCCCccccccchH
Confidence            45899999999887744 789999999999999999999999776543333

>KOG0606|consensus

Probab=98.81  E-value=8.4e-09  Score=85.69  Aligned_cols=150  Identities=25%  Similarity=0.351  Sum_probs=112.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCC------C----------------
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGV------P----------------   53 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~------~----------------   53 (197)
                      +.++.-++.++..+..+.++|         ++|      .+++.+++|||.....+.      .                
T Consensus       900 ~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~  979 (1205)
T KOG0606|consen  900 CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSE  979 (1205)
T ss_pred             CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccc
Confidence            367777888899999999999         333      567788999883322100      0                


Q ss_pred             ------c---cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy6390          54 ------V---RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDN  124 (197)
Q Consensus        54 ------~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (197)
                            .   .......+|+-|.+||...+.. -...+|+|++|+++++.++|..||...........+......     
T Consensus       980 ~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~----- 1053 (1205)
T KOG0606|consen  980 RRPQLSADEARRKHAVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIP----- 1053 (1205)
T ss_pred             cccccccchhhccccccCCCcccCCccccccc-CCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCC-----
Confidence                  0   0122346799999999998866 678899999999999999999999988877777555432111     


Q ss_pred             CCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHH---HHhcCcccCCC
Q psy6390         125 WPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAE---NALKHKYFADK  187 (197)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~---ell~hp~~~~~  187 (197)
                      |+                     ......+..+.+++.+.+..+|.+|..+.   ++-.||||++.
T Consensus      1054 ~p---------------------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1054 WP---------------------EGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred             CC---------------------CCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence            11                     11244677889999999999999999888   89999999876

>KOG1165|consensus

Probab=98.64  E-value=1.2e-07  Score=69.89  Aligned_cols=101  Identities=21%  Similarity=0.316  Sum_probs=83.1

Q ss_pred             hhHHHhhhcCCHHHHHHHHHHHHhhhccc---------ccCCCC-----------cEEEeecCCccccCCCccc------
Q psy6390           3 NLIQLEWEQVGTYQVKITTRLFLQATSFC---------IKPKSN-----------IVKVADFGLARAFGVPVRI------   56 (197)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~-----------~vkl~Dfg~s~~~~~~~~~------   56 (197)
                      +|+..=.++|+...+.-++.|++.-++|+         |||+|.           .|-++|||.|+...++...      
T Consensus       112 DLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYr  191 (449)
T KOG1165|consen  112 DLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYR  191 (449)
T ss_pred             HHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccc
Confidence            34445557899999999999999999999         999553           4579999999987654332      


Q ss_pred             -cccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCC
Q psy6390          57 -YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGD  104 (197)
Q Consensus        57 -~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~  104 (197)
                       .....||.+||+-..-++.. -+.+-|+=|+|=++..+|-|..||.+.
T Consensus       192 E~KSLsGTARYMSINTHlGrE-QSRRDDLEaLGHvFmYFLRGsLPWQGL  239 (449)
T KOG1165|consen  192 EHKSLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGL  239 (449)
T ss_pred             cccccccceeeeEeeccccch-hhhhhhHHHhhhhhhhhccCCCccccc
Confidence             23567899999998888755 688899999999999999999999874

>KOG1266|consensus

Probab=98.62  E-value=1.1e-07  Score=70.09  Aligned_cols=145  Identities=15%  Similarity=0.088  Sum_probs=88.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-------ccC----------CCCcEEEeecCCccccCC--C--ccccccceeccceeC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-------IKP----------KSNIVKVADFGLARAFGV--P--VRIYTHEVVTLWYRA   68 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-------lkp----------~~~~vkl~Dfg~s~~~~~--~--~~~~~~~~~~~~y~a   68 (197)
                      +.+.+...++++.||++||.||       +.+          .|+.+|++--.-......  .  ........+-+.|-+
T Consensus       171 ~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a  250 (458)
T KOG1266|consen  171 KALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSA  250 (458)
T ss_pred             hhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCcccc
Confidence            4588899999999999999999       222          556666553221111000  0  001112234556777


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC----hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS----EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF  144 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (197)
                      ||.-.... .+.++|||++|+...+|..+..--....    ..+..+.....+.                          
T Consensus       251 ~~sg~~tn-~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le--------------------------  303 (458)
T KOG1266|consen  251 PESGTTTN-TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE--------------------------  303 (458)
T ss_pred             CCcCcccc-cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc--------------------------
Confidence            77654322 5678999999999999987654322211    1111111111110                          


Q ss_pred             hhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       145 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                               ...-++++.+|++-.|..||++.+++.||.+-.+...
T Consensus       304 ---------n~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVhsl  340 (458)
T KOG1266|consen  304 ---------NGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVHSL  340 (458)
T ss_pred             ---------CccccCcCcccccCCCCCCcchhhhhcCceeeecchH
Confidence                     1122478899999999999999999999987655543

>KOG1163|consensus

Probab=98.50  E-value=1.8e-07  Score=66.23  Aligned_cols=112  Identities=20%  Similarity=0.203  Sum_probs=85.4

Q ss_pred             hhHHHhhhcCCHHHHHHHHHHHHhhhccc---------ccCCCC---------cEEEeecCCccccCCCc-------ccc
Q psy6390           3 NLIQLEWEQVGTYQVKITTRLFLQATSFC---------IKPKSN---------IVKVADFGLARAFGVPV-------RIY   57 (197)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~---------~vkl~Dfg~s~~~~~~~-------~~~   57 (197)
                      .|+++=.++|+..++.-++-|++.-++|+         |||+|.         .+.++|||+|+...+..       ...
T Consensus        99 dLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~  178 (341)
T KOG1163|consen   99 DLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYRED  178 (341)
T ss_pred             HHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccC
Confidence            34555557799999999999999999999         999763         36899999998764422       123


Q ss_pred             ccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy6390          58 THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFR  115 (197)
Q Consensus        58 ~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~  115 (197)
                      ....||.+|++-....+.. .+.+-|+=|+|.++..+.-|..||++.......++...
T Consensus       179 r~ltGTaRYASinAh~g~e-qSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEk  235 (341)
T KOG1163|consen  179 RNLTGTARYASINAHLGIE-QSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEK  235 (341)
T ss_pred             Cccceeeeehhhhhhhhhh-hhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHH
Confidence            3557899999887766533 56778999999999999999999998765555444333

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.47  E-value=1.6e-07  Score=77.62  Aligned_cols=81  Identities=15%  Similarity=0.049  Sum_probs=63.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.++|+|||+++.............+|+.|++||....
T Consensus        99 ~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~  178 (669)
T cd05610          99 GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDYS  178 (669)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCcccccccccCccccCcccccc
Confidence            4589999999999999999999         777      5577899999999876544333445578999999998766


Q ss_pred             CCCCCCchhhhhhhHH
Q psy6390          75 SQRYSCPVDVWSIGCI   90 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~   90 (197)
                      ..+....+++|++|+-
T Consensus       179 ~~~~~~~s~~~s~g~~  194 (669)
T cd05610         179 RTPGQVLSLISSLGFN  194 (669)
T ss_pred             CCCCceeeeeeecCcC
Confidence            5545566788888853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG2137|consensus

Probab=98.33  E-value=2.4e-07  Score=74.17  Aligned_cols=141  Identities=22%  Similarity=0.207  Sum_probs=94.2

Q ss_pred             HHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccc---------cccceeccceeCchhhcCC
Q psy6390          21 TRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRI---------YTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        21 ~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~   75 (197)
                      +.+.+.|+.|+          |.|      .++.+||+.|+.+.......+.         .........|.+||.+.+.
T Consensus       105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~  184 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT  184 (700)
T ss_pred             hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence            34455777777          444      6677899999987654332111         1112346789999999874


Q ss_pred             CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      . -+.++|++|+||.+|.+.. |+..+...................                         ......+++
T Consensus       185 ~-~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~-------------------------~~~~s~~~p  238 (700)
T KOG2137|consen  185 T-NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAG-------------------------AFGYSNNLP  238 (700)
T ss_pred             c-ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccc-------------------------cccccccCc
Confidence            4 6789999999999999884 666665543322222111100000                         001114578


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .++++=+.+++..++..||++.+++..|||.+.
T Consensus       239 ~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~  271 (700)
T KOG2137|consen  239 SELRESLKKLLNGDSAVRPTLDLLLSIPFFSDP  271 (700)
T ss_pred             HHHHHHHHHHhcCCcccCcchhhhhcccccCCc
Confidence            899999999999999999999999999999754

>KOG0601|consensus

Probab=98.29  E-value=1.3e-06  Score=68.79  Aligned_cols=145  Identities=18%  Similarity=0.147  Sum_probs=101.1

Q ss_pred             CCHHHHHHHHHHHHh----hhccc---------ccC------CC-CcEEEeecCCccccCCCcccccc-----ceeccce
Q psy6390          12 VGTYQVKITTRLFLQ----ATSFC---------IKP------KS-NIVKVADFGLARAFGVPVRIYTH-----EVVTLWY   66 (197)
Q Consensus        12 l~~~~~~~~~~qi~~----~l~~l---------lkp------~~-~~vkl~Dfg~s~~~~~~~~~~~~-----~~~~~~y   66 (197)
                      +++..++..+.+..+    |+.++         ++|      ++ ..++++|||....++........     ..+...|
T Consensus       215 ~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y  294 (524)
T KOG0601|consen  215 LPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIY  294 (524)
T ss_pred             CCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceE
Confidence            788899999999999    99998         555      44 67899999998877654322222     2567789


Q ss_pred             eCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        67 ~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      ++||+..+ . ++...|++++|.++.+...+.........                ..|......-            ..
T Consensus       295 ~~ke~~~~-l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~----------------~~W~~~r~~~------------ip  344 (524)
T KOG0601|consen  295 AAKELLNG-L-ATFASDIFSLGEVILEAILGSHLPSVGKN----------------SSWSQLRQGY------------IP  344 (524)
T ss_pred             eChhhhcc-c-cchHhhhcchhhhhHhhHhhcccccCCCC----------------CCcccccccc------------Cc
Confidence            99999975 3 57889999999999998887655432210                0011100000            00


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      .+.....+..+...+..|++.+|..|+++..++.|+++..
T Consensus       345 ~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  345 LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence            0111334556666899999999999999999999999873

>KOG1166|consensus

Probab=97.75  E-value=5.4e-05  Score=64.09  Aligned_cols=88  Identities=16%  Similarity=0.217  Sum_probs=72.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC-------------CcEEEeecCCccccCC--Cccccccceeccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS-------------NIVKVADFGLARAFGV--PVRIYTHEVVTLW   65 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-------------~~vkl~Dfg~s~~~~~--~~~~~~~~~~~~~   65 (197)
                      +..++.-+..+..|++.-+++|         |||+|             ..++|+|||.|..+..  +........+|-.
T Consensus       789 ~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~  868 (974)
T KOG1166|consen  789 KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDL  868 (974)
T ss_pred             CCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeecccc
Confidence            5688999999999999999999         88844             3469999999976532  3334455677888


Q ss_pred             eeCchhhcCCCCCCCchhhhhhhHHHHHHHhCC
Q psy6390          66 YRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK   98 (197)
Q Consensus        66 y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~   98 (197)
                      +-.+|...+.. ++..+|.+.++.+++.|+.|+
T Consensus       869 f~C~EM~~grp-WtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  869 FDCIEMREGRP-WTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             chhHHHhcCCC-CchhhhhHHHHHHHHHHHHHH
Confidence            89999998744 999999999999999999985

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.20  E-value=0.00077  Score=47.63  Aligned_cols=86  Identities=17%  Similarity=-0.015  Sum_probs=56.9

Q ss_pred             HHHHHHHHhhhccc---------c-cC------CCCcEEEeecCCccccCCCccc-------------cccceeccceeC
Q psy6390          18 KITTRLFLQATSFC---------I-KP------KSNIVKVADFGLARAFGVPVRI-------------YTHEVVTLWYRA   68 (197)
Q Consensus        18 ~~~~~qi~~~l~~l---------l-kp------~~~~vkl~Dfg~s~~~~~~~~~-------------~~~~~~~~~y~a   68 (197)
                      ..++.|++.+|.++         | ||      +++.++|+|||++.........             ......++.++.
T Consensus        94 ~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~  173 (218)
T PRK12274         94 LAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALT  173 (218)
T ss_pred             HHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            45788899999888         7 56      3466899999999865443211             011223667777


Q ss_pred             chhhcCCCCCC-CchhhhhhhHHHHHHHhCCCCCCC
Q psy6390          69 PEVLLGSQRYS-CPVDVWSIGCIFAEIATRKPLFQG  103 (197)
Q Consensus        69 PE~~~~~~~~~-~~~Diws~g~~l~~ll~~~~~~~~  103 (197)
                      |+.-.--...+ ...+..+.|+-+|.+.++..+.-+
T Consensus       174 ~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        174 PVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             HHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence            77653221123 445566899999999998877644

>PRK09188 serine/threonine protein kinase; Provisional

Probab=97.17  E-value=0.00048  Score=52.93  Aligned_cols=56  Identities=25%  Similarity=0.202  Sum_probs=41.7

Q ss_pred             HHHHHHHHhhhccc---------c-cCCC------CcEEEeecCCccccCCCccc--------cccceeccceeCchhhc
Q psy6390          18 KITTRLFLQATSFC---------I-KPKS------NIVKVADFGLARAFGVPVRI--------YTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        18 ~~~~~qi~~~l~~l---------l-kp~~------~~vkl~Dfg~s~~~~~~~~~--------~~~~~~~~~y~aPE~~~   73 (197)
                      ..++.|+++||.||         | ||+|      +.++|+|||+|+........        .....++..|++||.+.
T Consensus       114 ~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        114 PAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            57889999999999         8 8844      56899999999876543211        12345677889999874

>KOG1243|consensus

Probab=97.14  E-value=0.004  Score=50.70  Aligned_cols=86  Identities=19%  Similarity=0.218  Sum_probs=55.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhcccc----------------cCCCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFCI----------------KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~ll----------------kp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .++++...+..-+.||+.||.||.                ....+..||++|..+...+...........-..|..|+..
T Consensus        98 lk~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~  177 (690)
T KOG1243|consen   98 LKELGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEI  177 (690)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhc
Confidence            455678888999999999999991                1156778999988875443211101111111234455444


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATR   97 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~   97 (197)
                      ..   -.-..|.|.|||++++++.|
T Consensus       178 ~~---s~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  178 DP---SEWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             Cc---cccchhhhhHHHHHHHHhCc
Confidence            22   12357999999999999998

>KOG1035|consensus

Probab=97.04  E-value=0.0028  Score=54.82  Aligned_cols=140  Identities=17%  Similarity=0.245  Sum_probs=90.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc------------------ccCCCCcEEEe--ecCCccccCCCccccccceeccceeCch
Q psy6390          11 QVGTYQVKITTRLFLQATSFC------------------IKPKSNIVKVA--DFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l------------------lkp~~~~vkl~--Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      .++...++.+..++++|++|+                  -.+..+.+..+  ||+.++....... ......+..+.++|
T Consensus       282 ~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~-~~~~~~~~~~~~~e  360 (1351)
T KOG1035|consen  282 SIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK-SFSDLLAEIRNADE  360 (1351)
T ss_pred             ccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCccc-chhhcCcccccccc
Confidence            477888999999999999999                  11133445555  8888776654432 22334456677787


Q ss_pred             hhcCCC-CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQ-RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~-~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      ...... ......|+|.+|.....+..+..+-.....      +..++..                              
T Consensus       361 ~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~------~~~~l~~------------------------------  404 (1351)
T KOG1035|consen  361 DLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAV------PVSLLDV------------------------------  404 (1351)
T ss_pred             ccccccchhhhhhHHHHHHHHHhhhhhcCcccccccc------hhhhhcc------------------------------
Confidence            776533 123347999999999888876543211110      0000000                              


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                       . ......+...+|+.-++++|+++.+++.|+|.+..++
T Consensus       405 -~-~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~  442 (1351)
T KOG1035|consen  405 -L-STSELLDALPKCLDEDSEERLSALELLTHPFLRFPTD  442 (1351)
T ss_pred             -c-cchhhhhhhhhhcchhhhhccchhhhhhchhcccccc
Confidence             0 1115568889999999999999999999999865443

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=96.95  E-value=0.0014  Score=45.84  Aligned_cols=44  Identities=5%  Similarity=-0.010  Sum_probs=36.0

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc----------ccCCC-----CcEEEeecCCccccC
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC----------IKPKS-----NIVKVADFGLARAFG   51 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l----------lkp~~-----~~vkl~Dfg~s~~~~   51 (197)
                      ....+++..+..++.|++.+|.++          |||.|     +.++|+|||+|....
T Consensus       110 ~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~~~v~LiDFG~a~~~~  168 (190)
T cd05147         110 KDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHDGKLYIIDVSQSVEHD  168 (190)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEECCcEEEEEccccccCC
Confidence            345689999999999999999987          77744     568999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=96.82  E-value=0.00058  Score=48.99  Aligned_cols=62  Identities=10%  Similarity=0.080  Sum_probs=39.4

Q ss_pred             HHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCCCCCCCchhh
Q psy6390          20 TTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV   84 (197)
Q Consensus        20 ~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di   84 (197)
                      .+.+++.++..+         ++|      +++ ++|+|||.+..........            ..+.. ..++.++|+
T Consensus       140 ~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d------------~~vle-r~y~~~~di  205 (232)
T PRK10359        140 VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKD------------RIDLE-RHYGIKNEI  205 (232)
T ss_pred             HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhhHH------------HHHHH-hHhcccccc
Confidence            355777777777         566      344 8999999886553221110            02233 226678999


Q ss_pred             hhhhHHHHHHH
Q psy6390          85 WSIGCIFAEIA   95 (197)
Q Consensus        85 ws~g~~l~~ll   95 (197)
                      |++|+++..+.
T Consensus       206 ~~lg~~~~~~~  216 (232)
T PRK10359        206 KDLGYYLLIYK  216 (232)
T ss_pred             cceeEeehHHH
Confidence            99999877653

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=96.31  E-value=0.0068  Score=42.24  Aligned_cols=43  Identities=5%  Similarity=-0.060  Sum_probs=35.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccCCC-----CcEEEeecCCccccCC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKPKS-----NIVKVADFGLARAFGV   52 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp~~-----~~vkl~Dfg~s~~~~~   52 (197)
                      .++++.++..++.|++.++.++          |||.|     +.++|+|||++.....
T Consensus       112 ~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~~~~~~liDFG~a~~~~~  169 (190)
T cd05145         112 VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYHDGKPYIIDVSQAVELDH  169 (190)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEECCCEEEEEcccceecCC
Confidence            4578889999999999999988          77755     5579999999976543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=96.08  E-value=0.029  Score=43.91  Aligned_cols=92  Identities=10%  Similarity=0.013  Sum_probs=60.1

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC--
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG--   74 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~--   74 (197)
                      ..-.-+....+.++.|.+-|         +++      +...|.|.|=..-... .........+|...|.+||.-.-  
T Consensus       114 ~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~-~ng~~~~cpVg~~eftPPElQ~~~s  192 (637)
T COG4248         114 CAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN-ANGTLHLCPVGVSEFTPPELQTLPS  192 (637)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeec-cCCceEecccCccccCCHHHhcccc
Confidence            45566788889999988888         333      3344555543322111 11222334577889999998641  


Q ss_pred             --CCCCCCchhhhhhhHHHHHHHhC-CCCCCCC
Q psy6390          75 --SQRYSCPVDVWSIGCIFAEIATR-KPLFQGD  104 (197)
Q Consensus        75 --~~~~~~~~Diws~g~~l~~ll~~-~~~~~~~  104 (197)
                        .-.-+...|.+.+|+++++++.| +.||.+-
T Consensus       193 f~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         193 FVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             ccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence              11245678999999999999985 9999763

>KOG1093|consensus

Probab=95.87  E-value=0.0093  Score=47.70  Aligned_cols=93  Identities=25%  Similarity=0.174  Sum_probs=63.2

Q ss_pred             CCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhH
Q psy6390          78 YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG  157 (197)
Q Consensus        78 ~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (197)
                      .++++||||+|.++.++.-|...+......+.+..+..+...+....                 .-.+.....-.++...
T Consensus       108 ~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~-----------------~~a~e~~~~~~~d~~~  170 (725)
T KOG1093|consen  108 IGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELL-----------------STAMEHLIQLLADKKR  170 (725)
T ss_pred             CCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHH-----------------HHHHHHHHHHhhhHhH
Confidence            45799999999999999988877766666666555544322211100                 0001112223356778


Q ss_pred             HHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         158 LDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       158 ~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .++..+|+-..|..||...++.+++-|..+
T Consensus       171 ~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev  200 (725)
T KOG1093|consen  171 LPLLKKCLWLEPIIRPLPMELSKRCSFTEV  200 (725)
T ss_pred             HHHhccCCccccccccchhHHhcCccHHHH
Confidence            899999999999999999999998877543

>KOG0601|consensus

Probab=95.78  E-value=0.0075  Score=48.18  Aligned_cols=139  Identities=20%  Similarity=0.126  Sum_probs=89.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC-------CcEEEeecCCccccCCCccccccceecccee-Cchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS-------NIVKVADFGLARAFGVPVRIYTHEVVTLWYR-APEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~-------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~-aPE~~~   73 (197)
                      .+++...+.+..|++.++.++         ++|+|       ...+++|||....+.....   .....-++. ..|++.
T Consensus       362 ~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~---~~~~~~r~~p~~~~~~  438 (524)
T KOG0601|consen  362 MLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG---VFHHIDRLYPIAEILL  438 (524)
T ss_pred             hcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccceecc---cccccccccccchhhc
Confidence            488889999999999999999         55532       5567888888754322111   111222334 366665


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      ....+..++|++++|..+.+..++.+.-.....   ...+.....                             ...+..
T Consensus       439 e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~~-----------------------------p~~~~~  486 (524)
T KOG0601|consen  439 EDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGDT-----------------------------PNLPGL  486 (524)
T ss_pred             cccccccccccccccccccccccCcccCccccc---ceeeecccc-----------------------------cCCCch
Confidence            555588999999999999998887644322211   111111000                             000222


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ...+..+...|...++..|+.+.++..|.=|
T Consensus       487 ~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  487 KLQLQVLLKVMINPDRKRRPSAVELSLHSEF  517 (524)
T ss_pred             HHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence            3566678889999999999999999888744

>KOG0576|consensus

Probab=95.14  E-value=0.029  Score=46.02  Aligned_cols=90  Identities=18%  Similarity=0.074  Sum_probs=66.8

Q ss_pred             CCHHHHHHHHHHHHhhhccc--c--------cCCCCcEEEeecCCccccCCCccccccceeccceeCchhhcCCCCCCCc
Q psy6390          12 VGTYQVKITTRLFLQATSFC--I--------KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP   81 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l--l--------kp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~   81 (197)
                      +.+.+.....+.-..+++++  +        ...+...+.+||+....+.... ......+++.+++||+...+. +...
T Consensus       333 ~~~~~~~~~~r~et~~l~~l~~~~~~~~d~~l~s~~~~~~~~~~v~~~L~~~~-~~~t~~~~~~~~~pev~~~~~-~~~~  410 (829)
T KOG0576|consen  333 LEQYQFAYPLRKETRPLAELHSSYKVHRDNILGSEEEVKLLDFAVPPQLTRTM-KPRTAIGTPEPLAPEVIQENT-IDGC  410 (829)
T ss_pred             hhhhhhhhhhhhhcccccccccccccCcccccccccccccccccCCcccCccc-ccccCCCCCCCCCchhhcccc-cccC
Confidence            55566667777778888888  2        3345667999999887665443 344567899999999988756 8889


Q ss_pred             hhhhhhhHHHHHHHhCCCCCCC
Q psy6390          82 VDVWSIGCIFAEIATRKPLFQG  103 (197)
Q Consensus        82 ~Diws~g~~l~~ll~~~~~~~~  103 (197)
                      .|.|+.|+--.++..|.+|-..
T Consensus       411 p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  411 PDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             CCccCCCcchhhcCCCCCCCCC
Confidence            9999999877777777666443

>KOG1290|consensus

Probab=94.54  E-value=0.034  Score=43.97  Aligned_cols=43  Identities=16%  Similarity=0.234  Sum_probs=35.9

Q ss_pred             HHhhhcCCHHHHHHHHHHHHhhhccc----------ccCCCCcEEEeecCCcc
Q psy6390           6 QLEWEQVGTYQVKITTRLFLQATSFC----------IKPKSNIVKVADFGLAR   48 (197)
Q Consensus         6 ~~~~~~l~~~~~~~~~~qi~~~l~~l----------lkp~~~~vkl~Dfg~s~   48 (197)
                      ..+.+.++...++.|++|++.||.||          |||+|..+-.++...++
T Consensus       178 ~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~  230 (590)
T KOG1290|consen  178 YSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAK  230 (590)
T ss_pred             HhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhh
Confidence            34667899999999999999999999          99999777776555544

>KOG3741|consensus

Probab=94.43  E-value=0.34  Score=39.09  Aligned_cols=117  Identities=14%  Similarity=0.047  Sum_probs=74.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+.+|..++.|+.|+..||.++         |.+      .+..++|+..|.......+.       +       +.+. 
T Consensus       388 ~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~-------~-------~~le-  452 (655)
T KOG3741|consen  388 LKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP-------T-------EPLE-  452 (655)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCCC-------C-------cchh-
Confidence            4588999999999999999999         222      33466777766665443221       0       1111 


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCC-CCCCChHHH-HHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPL-FQGDSEIDQ-LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                         .-.+-|.-.+|.+++.|.+|..- ......... +..+.                                    +.
T Consensus       453 ---~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~------------------------------------~~  493 (655)
T KOG3741|consen  453 ---SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT------------------------------------TT  493 (655)
T ss_pred             ---HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh------------------------------------hh
Confidence               22457888999999999998543 111111111 22221                                    34


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .|.++++++.-....+++. -++.+++.+
T Consensus       494 yS~D~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  494 YSTDLRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             hhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence            6677888887777777765 677777654

>smart00090 RIO RIO-like kinase

Probab=92.98  E-value=0.12  Score=37.38  Aligned_cols=41  Identities=7%  Similarity=-0.062  Sum_probs=32.2

Q ss_pred             cCCHHHHHHHHHHHHhhhccc----------ccCCC-----CcEEEeecCCccccC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC----------IKPKS-----NIVKVADFGLARAFG   51 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l----------lkp~~-----~~vkl~Dfg~s~~~~   51 (197)
                      .+...++..++.|++.++.+|          +||+|     +.++|+|||.+...+
T Consensus       144 ~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~~~~i~LiDFg~a~~~~  199 (237)
T smart00090      144 EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVHDGKVVIIDVSQSVELD  199 (237)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEECCCEEEEEChhhhccC
Confidence            456667789999999999888          77755     457899999987544

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=90.73  E-value=0.38  Score=33.61  Aligned_cols=38  Identities=5%  Similarity=-0.018  Sum_probs=28.6

Q ss_pred             HHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCC
Q psy6390          15 YQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGV   52 (197)
Q Consensus        15 ~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~   52 (197)
                      .....++.++++++.++         |+|      +++.++|+|||.+.....
T Consensus       125 ~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         125 EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence            44567888999988877         677      356679999999865543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=86.33  E-value=0.89  Score=31.23  Aligned_cols=37  Identities=11%  Similarity=-0.034  Sum_probs=29.3

Q ss_pred             HHHHHHHHHHHhhhccc----------ccCCC-----CcEEEeecCCccccC
Q psy6390          15 YQVKITTRLFLQATSFC----------IKPKS-----NIVKVADFGLARAFG   51 (197)
Q Consensus        15 ~~~~~~~~qi~~~l~~l----------lkp~~-----~~vkl~Dfg~s~~~~   51 (197)
                      .++..++.+++.++.++          ++|+|     +.++|+|||.+....
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~~~~~~liDfg~a~~~~  165 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVDDGKVYIIDVPQAVEID  165 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEECCcEEEEECccccccc
Confidence            57788999999999888          66654     567999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=86.20  E-value=0.81  Score=37.48  Aligned_cols=34  Identities=15%  Similarity=0.136  Sum_probs=27.9

Q ss_pred             HHHHHHHHHhhhccc---------ccCCC-----CcEEEeecCCcccc
Q psy6390          17 VKITTRLFLQATSFC---------IKPKS-----NIVKVADFGLARAF   50 (197)
Q Consensus        17 ~~~~~~qi~~~l~~l---------lkp~~-----~~vkl~Dfg~s~~~   50 (197)
                      ...++.|++.++.+|         +||+|     +.++|+|||.++..
T Consensus       430 ~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~~~~~~liDFGla~~~  477 (535)
T PRK09605        430 NPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVRDDRLYLIDFGLGKYS  477 (535)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccCCCChHHEEEECCcEEEEeCcccccC
Confidence            567899999999999         77744     56799999999754

>PRK14879 serine/threonine protein kinase; Provisional

Probab=82.64  E-value=1.7  Score=30.44  Aligned_cols=35  Identities=17%  Similarity=0.134  Sum_probs=27.8

Q ss_pred             HHHHHHHHHHhhhccc---------ccCCC-----CcEEEeecCCcccc
Q psy6390          16 QVKITTRLFLQATSFC---------IKPKS-----NIVKVADFGLARAF   50 (197)
Q Consensus        16 ~~~~~~~qi~~~l~~l---------lkp~~-----~~vkl~Dfg~s~~~   50 (197)
                      ....++.+++.+|.++         ++|.|     +.++|+|||.+...
T Consensus        96 ~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~~~~~~liDf~~a~~~  144 (211)
T PRK14879         96 EELELSREIGRLVGKLHSAGIIHGDLTTSNMILSGGKIYLIDFGLAEFS  144 (211)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEECCCEEEEECCcccCC
Confidence            6678899999999988         66644     56789999998753

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=82.58  E-value=1.6  Score=31.73  Aligned_cols=30  Identities=10%  Similarity=-0.011  Sum_probs=23.3

Q ss_pred             HHHHHhhhccc---------ccCCC------CcEEEeecCCcccc
Q psy6390          21 TRLFLQATSFC---------IKPKS------NIVKVADFGLARAF   50 (197)
Q Consensus        21 ~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~   50 (197)
                      +.|++.++++|         |+|.|      +.++|+|||.+...
T Consensus       148 ~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        148 WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGELR  192 (239)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence            57888888888         77743      46899999998654

>KOG1826|consensus

Probab=82.42  E-value=0.31  Score=44.78  Aligned_cols=66  Identities=12%  Similarity=0.098  Sum_probs=50.3

Q ss_pred             CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCC
Q psy6390          35 KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLF  101 (197)
Q Consensus        35 ~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~  101 (197)
                      .|..++++++|+.+...+........++++.|+.+++...-. ++.++|+|..|+-+|....|..+|
T Consensus      1375 tny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik-~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1375 TNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIK-FTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             cCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhcccHHH
Confidence            566789999999985444444555667888999999987655 677799999999988877665444

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=80.82  E-value=1.8  Score=30.07  Aligned_cols=32  Identities=16%  Similarity=0.152  Sum_probs=25.9

Q ss_pred             HHHHHHHhhhccc---------ccCCC-----CcEEEeecCCcccc
Q psy6390          19 ITTRLFLQATSFC---------IKPKS-----NIVKVADFGLARAF   50 (197)
Q Consensus        19 ~~~~qi~~~l~~l---------lkp~~-----~~vkl~Dfg~s~~~   50 (197)
                      .++.|++.+|.+|         ++|+|     +.++++|||.+...
T Consensus        94 ~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~~~~~~liDfg~a~~~  139 (199)
T TIGR03724        94 ELLREIGRLVGKLHKAGIVHGDLTTSNIIVRDDKLYLIDFGLGKYS  139 (199)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCcceEEEECCcEEEEECCCCcCC
Confidence            7899999999999         56644     56799999998754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	197
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-54
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		4e-54
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		4e-54
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		6e-54
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		7e-54
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		7e-54
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		7e-54
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		7e-54
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-54
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		7e-54
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		7e-54
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		8e-54
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		8e-54
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-53
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-53
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-53
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-53
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		3e-53
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		3e-53
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		3e-53
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		3e-53
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		3e-53
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		3e-53
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-53
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-53
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-53
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		3e-53
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-53
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		3e-53
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-53
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-53
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-53
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		3e-53
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-53
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		4e-53
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-47
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-47
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-47
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		3e-42
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-42
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-42
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		8e-41
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-40
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-39
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-38
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-36
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-34
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-34
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		8e-34
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-31
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		5e-31
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-30
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-30
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		2e-26
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-26
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-26
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-26
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		3e-26
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		8e-25
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-24
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		1e-24
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-24
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-24
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-24
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-24
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-24
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-24
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-24
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-24
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		3e-24
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		3e-24
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		3e-24
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-24
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-24
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-24
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-24
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-24
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-24
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		3e-24
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-24
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-24
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		3e-24
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-24
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		3e-24
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		4e-24
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-24
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		8e-24
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		3e-23
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		3e-22
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		7e-22
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		9e-22
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-21
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		5e-21
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-20
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-20
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-20
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-20
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-20
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-20
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-20
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-20
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-20
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-20
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-20
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-20
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-20
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-20
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-20
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-20
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-20
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-20
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-20
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-20
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-20
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-20
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-20
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-20
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-20
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-20
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-20
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-20
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		2e-20
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-20
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-20
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-20
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-20
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		3e-20
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-20
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		3e-20
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-20
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-20
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-20
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-20
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-20
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-20
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		3e-20
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-20
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-20
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		3e-20
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		3e-20
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-20
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-20
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		3e-20
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		3e-20
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		3e-20
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-20
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-20
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		6e-20
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		6e-20
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		6e-20
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		7e-20
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		7e-20
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		9e-20
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		1e-19
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-19
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-19
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-19
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-19
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		4e-19
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		6e-19
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		6e-19
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		6e-19
4exu_A	371	Mapk13, Inactive Form Length = 371		7e-19
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		7e-19
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		7e-19
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		7e-19
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		7e-19
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		7e-19
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		7e-19
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		8e-19
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		8e-19
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		8e-19
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		8e-19
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		8e-19
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		8e-19
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		9e-19
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		2e-18
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		2e-18
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-18
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		3e-18
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		3e-18
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		3e-18
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		3e-18
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		3e-18
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		3e-18
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		3e-18
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-18
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		4e-18
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		4e-18
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-18
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-18
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		5e-18
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		5e-18
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		5e-18
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		5e-18
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		5e-18
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		5e-18
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		5e-18
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		6e-18
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		8e-18
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-17
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		3e-17
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		4e-17
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-17
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		4e-17
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		5e-17
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		6e-17
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		7e-17
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		7e-17
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		7e-17
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		7e-17
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		8e-17
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-16
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-16
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		2e-16
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		2e-16
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		2e-16
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		2e-16
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		3e-16
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		3e-16
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		3e-16
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		3e-16
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		3e-16
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		3e-16
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		3e-16
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		3e-16
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		3e-16
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		3e-16
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		3e-16
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		3e-16
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		3e-16
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		4e-16
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		4e-16
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		5e-16
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		3e-15
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		3e-15
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		4e-15
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		1e-13
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		1e-13
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-13
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		2e-13
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		2e-13
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		2e-13
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-13
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		2e-13
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		2e-13
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		2e-13
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-13
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		7e-13
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		1e-12
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-10
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-10
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-10
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-10
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-10
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-09
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-09
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-09
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		9e-09
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-08
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		6e-08
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		6e-08
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		6e-08
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		6e-08
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		2e-07
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-07
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-07
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		4e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-07
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		5e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		5e-07
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		5e-07
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-06
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		2e-06
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-06
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-06
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-06
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		5e-06
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		6e-06
3soa_A	444	Full-Length Human Camkii Length = 444		7e-06
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		7e-06
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		8e-06
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		8e-06
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		8e-06
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-05
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-05
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-05
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-05
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-05
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-05
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		3e-05
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		3e-05
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		3e-05
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-05
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		3e-05
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		3e-05
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		4e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		4e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		4e-05
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		4e-05
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		4e-05
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		4e-05
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		4e-05
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		4e-05
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		4e-05
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		5e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		5e-05
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		5e-05
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		6e-05
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		6e-05
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		6e-05
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		6e-05
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		6e-05
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		6e-05
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		6e-05
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		6e-05
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		6e-05
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		7e-05
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		7e-05
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		7e-05
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		7e-05
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		8e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		1e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-04
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-04
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-04
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-04
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-04
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		2e-04
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-04
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-04
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-04
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		3e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		3e-04
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		3e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		3e-04
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		4e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		4e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		4e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		4e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		4e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		4e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		4e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		4e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		4e-04
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		4e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		4e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		4e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		5e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		5e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		5e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		5e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		5e-04
4fie_A	423	Full-Length Human Pak4 Length = 423		6e-04
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		7e-04
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		7e-04
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		7e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		8e-04
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		8e-04
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		8e-04
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		8e-04
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		9e-04

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  207 bits (527), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 103/180 (57%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  SFC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 112 LLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  207 bits (526), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 178
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 238
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 239 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  207 bits (526), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  206 bits (524), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 172
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  206 bits (524), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  206 bits (524), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  206 bits (524), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  206 bits (524), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 178
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 238
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 239 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  206 bits (524), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  206 bits (524), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 175
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  206 bits (524), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  206 bits (524), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  206 bits (523), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 124/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR YTHEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 175
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 170
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 170
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  204 bits (518), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  204 bits (518), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  204 bits (518), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  204 bits (518), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 15/180 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D T
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  203 bits (517), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 100/178 (56%), Positives = 122/178 (68%), Gaps = 15/178 (8%)
Query: 24  FLQATSFC---------IKPKS------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++        +K+ADFGLARAFGVPVR Y HEVVTLWYRA
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           PE+LLG + YS  VD+WS+GCIFAE+ TR+ LF GDSEIDQLFRIFR L TP E  WPGV
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
           + +PDYK +FP+W+     K V  LD+DG  LL + L Y P  RI+A+ AL H +F D
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score =  185 bits (470), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 84/150 (56%), Positives = 106/150 (70%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFGLARAFG+PVR YTHEVVTLWYRAP+VL+GS++YS  +D+WS+GCIFAE+    
Sbjct: 139 LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGA 198
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           PLF G SE DQL RIFR+L TP   NWP V++LP Y   F  +     +  +K LD+ G+
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI 258
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKT 188
           DLL K L   P  RI A+ AL+H YF +  
Sbjct: 259 DLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score =  185 bits (470), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 84/150 (56%), Positives = 106/150 (70%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFGLARAFG+PVR YTHEVVTLWYRAP+VL+GS++YS  +D+WS+GCIFAE+    
Sbjct: 139 LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           PLF G SE DQL RIFR+L TP   NWP V++LP Y   F  +     +  +K LD+ G+
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI 258
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKT 188
           DLL K L   P  RI A+ AL+H YF +  
Sbjct: 259 DLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 83/150 (55%), Positives = 106/150 (70%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFGLARAFG+PVR YTHE+VTLWYRAP+VL+GS++YS  +D+WS+GCIFAE+    
Sbjct: 139 LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           PLF G SE DQL RIFR+L TP   NWP V++LP Y   F  +     +  +K LD+ G+
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI 258
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKT 188
           DLL K L   P  RI A+ AL+H YF +  
Sbjct: 259 DLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score =  167 bits (423), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/149 (52%), Positives = 107/149 (71%), Gaps = 1/149 (0%)
Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           ++K+ DFGLARAFG+P+R +THE++TLWYR PE+LLGS+ YS  VD+WSI CI+AE+  +
Sbjct: 175 VLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMK 234
Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
            PLF GDSEIDQLF+IF VL  P +  WPGV+ LPD+K +FP++    L + +  L  D 
Sbjct: 235 TPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDE 294
Query: 158 LDLLEKTLIYC-PATRINAENALKHKYFA 185
              L   ++   P  RI+A+NAL+H YF+
Sbjct: 295 GLDLLTAMLEMDPVKRISAKNALEHPYFS 323

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score =  167 bits (422), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 88/187 (47%), Positives = 118/187 (63%), Gaps = 16/187 (8%)
Query: 16  QVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTHE 60
           Q+KI     L+  + C         +KP++ ++      K+ADFGLARAFG+PVR YTHE
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 61  VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           VVTLWYRAP+VL+GS++YS  VD+WSIGCIFAE+ T KPLF G ++ DQL +IF +L TP
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 121 TEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 179
               WP V +LP +K  TF  +        +    Q+G+DLL   L + P  RI+A +A+
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 180 KHKYFAD 186
            H YF D
Sbjct: 300 NHPYFKD 306

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score =  167 bits (422), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 88/187 (47%), Positives = 118/187 (63%), Gaps = 16/187 (8%)
Query: 16  QVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTHE 60
           Q+KI     L+  + C         +KP++ ++      K+ADFGLARAFG+PVR YTHE
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 61  VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           VVTLWYRAP+VL+GS++YS  VD+WSIGCIFAE+ T KPLF G ++ DQL +IF +L TP
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 121 TEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 179
               WP V +LP +K  TF  +        +    Q+G+DLL   L + P  RI+A +A+
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 180 KHKYFAD 186
            H YF D
Sbjct: 300 NHPYFKD 306

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score =  162 bits (411), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 83/154 (53%), Positives = 109/154 (70%), Gaps = 3/154 (1%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           ++  +K+ADFGLARAFG+PVR Y+ EVVTLWYR P+VL G++ YS  +D+WS GCIFAE+
Sbjct: 136 RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
Query: 95  AT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW-SNFCLDKHVKN 152
           A   +PLF G+   DQL RIFR+L TPTE+ WP ++KLPDYK  +P + +   L   V  
Sbjct: 196 ANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-PYPMYPATTSLVNVVPK 254
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
           L+  G DLL+  L   P  RI+AE AL+H YF+D
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score =  161 bits (407), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 82/154 (53%), Positives = 109/154 (70%), Gaps = 3/154 (1%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           ++  +K+A+FGLARAFG+PVR Y+ EVVTLWYR P+VL G++ YS  +D+WS GCIFAE+
Sbjct: 136 RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
Query: 95  ATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW-SNFCLDKHVKN 152
           A   +PLF G+   DQL RIFR+L TPTE+ WP ++KLPDYK  +P + +   L   V  
Sbjct: 196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-PYPMYPATTSLVNVVPK 254
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
           L+  G DLL+  L   P  RI+AE AL+H YF+D
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score =  159 bits (401), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 80/189 (42%), Positives = 117/189 (61%), Gaps = 16/189 (8%)
Query: 12  VGTYQVKITTRLFLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRI 56
           +  + VK+     L+  ++C         +KP++ ++      K+ADFGLARA  +P + 
Sbjct: 97  INMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156
Query: 57  YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
           Y +EVVTLWYR P++LLGS  YS  +D+W +GCIF E+AT +PLF G +  +QL  IFR+
Sbjct: 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI 216
Query: 117 LTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA 175
           L TPTE+ WPG+    ++KT  +P++    L  H   LD DG DLL K L +    RI+A
Sbjct: 217 LGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISA 276
Query: 176 ENALKHKYF 184
           E+A+KH +F
Sbjct: 277 EDAMKHPFF 285

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           ++ ++K+ADFGLA++FG P R Y H+VVT WYRAPE+L G++ Y   VD+W++GCI AE+
Sbjct: 147 ENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
             R P   GDS++DQL RIF  L TPTE+ WP +  LPDY  TF  +    L        
Sbjct: 207 LLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY-VTFKSFPGIPLHHIFSAAG 265
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYFADK 187
            D LDL++   ++ P  RI A  ALK KYF+++
Sbjct: 266 DDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score =  148 bits (374), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/183 (43%), Positives = 108/183 (59%), Gaps = 20/183 (10%)
Query: 24  FLQATSFC---------IKPKSNIV------KVADFGLARAFGVPVRIYTHEVVTLWYRA 68
            LQ  +FC         +KP++ ++      K+ DFGLARAFG+PV  ++ EVVTLWYRA
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 69  PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV 128
           P+VL+GS+ YS  +D+WS GCI AE+ T KPLF G ++ +QL  IF ++ TP E  WP V
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236
Query: 129 SKLPDYKTTF----PEWSNFCLDKHVKN-LDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +KLP Y        P      L  H K  LD + +D L   L   P  R++A+ AL H +
Sbjct: 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
Query: 184 FAD 186
           FA+
Sbjct: 297 FAE 299

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/151 (50%), Positives = 101/151 (66%), Gaps = 4/151 (2%)
Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           S  +K+ADFGLAR +   + + T  VVTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+ 
Sbjct: 156 SGQIKLADFGLARIYSFQMAL-TSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMF 213
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
            RKPLF+G S++DQL +I  V+  P E++WP    LP  +  F   S   ++K V ++D+
Sbjct: 214 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDE 271
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFAD 186
            G DLL K L + PA RI+A +AL H YF D
Sbjct: 272 LGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/151 (50%), Positives = 101/151 (66%), Gaps = 4/151 (2%)
Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           S  +K+ADFGLAR +   + + T  VVTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+ 
Sbjct: 156 SGQIKLADFGLARIYSFQMAL-TSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMF 213
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
            RKPLF+G S++DQL +I  V+  P E++WP    LP  +  F   S   ++K V ++D+
Sbjct: 214 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDE 271
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFAD 186
            G DLL K L + PA RI+A +AL H YF D
Sbjct: 272 LGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score =  139 bits (351), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 75/149 (50%), Positives = 100/149 (67%), Gaps = 4/149 (2%)
Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           S  +K+ADFGLAR +   + + T  VVTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+ 
Sbjct: 156 SGQIKLADFGLARIYSFQMAL-TSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMF 213
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
            RKPLF+G S++DQL +I  V+  P E++WP    LP  +  F   S   ++K V ++D+
Sbjct: 214 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDE 271
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYF 184
            G DLL K L + PA RI+A +AL H YF
Sbjct: 272 LGKDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  130 bits (327), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/183 (43%), Positives = 106/183 (57%), Gaps = 19/183 (10%)
Query: 17  VKITTRLFLQATSF----CI-----KPKS------NIVKVADFGLARAFGVPVRIYTHEV 61
           +K   R FL+   F    CI     KP++        VK+ADFGLAR +   + ++   V
Sbjct: 114 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP-VV 172
Query: 62  VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 121
           VTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+  RKPLF G+SE DQL +IF ++  P 
Sbjct: 173 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 122 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
           ED+WP    LP  +  FP      +   V  +++ G  LL + L + P  RI+A  AL+H
Sbjct: 232 EDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
Query: 182 KYF 184
            Y 
Sbjct: 290 SYL 292

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score =  130 bits (327), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/183 (43%), Positives = 106/183 (57%), Gaps = 19/183 (10%)
Query: 17  VKITTRLFLQATSF----CI-----KPKS------NIVKVADFGLARAFGVPVRIYTHEV 61
           +K   R FL+   F    CI     KP++        VK+ADFGLAR +   + + T  V
Sbjct: 122 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-TPVV 180
Query: 62  VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 121
           VTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+  RKPLF G+SE DQL +IF ++  P 
Sbjct: 181 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239
Query: 122 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
           ED+WP    LP  +  FP      +   V  +++ G  LL + L + P  RI+A  AL+H
Sbjct: 240 EDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297
Query: 182 KYF 184
            Y 
Sbjct: 298 SYL 300

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/183 (43%), Positives = 105/183 (57%), Gaps = 19/183 (10%)
Query: 17  VKITTRLFLQATSF----CI-----KPKS------NIVKVADFGLARAFGVPVRIYTHEV 61
           +K   R FL+   F    CI     KP++        VK+ADFGLAR +   + +    V
Sbjct: 114 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-APVV 172
Query: 62  VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 121
           VTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+  RKPLF G+SE DQL +IF ++  P 
Sbjct: 173 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 122 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
           ED+WP    LP  +  FP      +   V  +++ G  LL + L + P  RI+A  AL+H
Sbjct: 232 EDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
Query: 182 KYF 184
            Y 
Sbjct: 290 SYL 292

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  128 bits (322), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/189 (42%), Positives = 107/189 (56%), Gaps = 31/189 (16%)
Query: 17  VKITTRLFLQATSF----CI-----KPKS------NIVKVADFGLARAFGVPVRIYTHE- 60
           +K   R FL+   F    CI     KP++        VK+ADFGLAR       IY+++ 
Sbjct: 114 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-------IYSYQM 166
Query: 61  -----VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFR 115
                VVTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+  RKPLF G+SE DQL +IF 
Sbjct: 167 ALDPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
Query: 116 VLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINA 175
           ++  P ED+WP    LP  +  FP      +   V  +++ G  LL + L + P  RI+A
Sbjct: 226 LIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISA 283
Query: 176 ENALKHKYF 184
             AL+H Y 
Sbjct: 284 FRALQHSYL 292

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 9/158 (5%)
Query: 35  KSNIVKVADFGLARAFGV-----PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
           +  ++K+ADFGLARAF +     P R Y + VVTLWYR PE+LLG + Y  P+D+W  GC
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNR-YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLDK 148
           I AE+ TR P+ QG++E  QL  I ++  + T + WP V     Y K    +     +  
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 278
Query: 149 HVKNLDQD--GLDLLEKTLIYCPATRINAENALKHKYF 184
            +K   +D   LDL++K L+  PA RI++++AL H +F
Sbjct: 279 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 9/158 (5%)
Query: 35  KSNIVKVADFGLARAFGV-----PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
           +  ++K+ADFGLARAF +     P R Y + VVTLWYR PE+LLG + Y  P+D+W  GC
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNR-YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLDK 148
           I AE+ TR P+ QG++E  QL  I ++  + T + WP V     Y K    +     +  
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 278
Query: 149 HVKNLDQD--GLDLLEKTLIYCPATRINAENALKHKYF 184
            +K   +D   LDL++K L+  PA RI++++AL H +F
Sbjct: 279 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 9/158 (5%)
Query: 35  KSNIVKVADFGLARAFGV-----PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
           +  ++K+ADFGLARAF +     P R Y + VVTLWYR PE+LLG + Y  P+D+W  GC
Sbjct: 159 RDGVLKLADFGLARAFSLAKNSQPNR-YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 217
Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLDK 148
           I AE+ TR P+ QG++E  QL  I ++  + T + WP V     Y K    +     +  
Sbjct: 218 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 277
Query: 149 HVKNLDQD--GLDLLEKTLIYCPATRINAENALKHKYF 184
            +K   +D   LDL++K L+  PA RI++++AL H +F
Sbjct: 278 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 9/158 (5%)
Query: 35  KSNIVKVADFGLARAFGV-----PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
           +  ++K+ADFGLARAF +     P R Y + VVTLWYR PE+LLG + Y  P+D+W  GC
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNR-YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLDK 148
           I AE+ TR P+ QG++E  QL  I ++  + T + WP V     Y K    +     +  
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 278
Query: 149 HVKNLDQD--GLDLLEKTLIYCPATRINAENALKHKYF 184
            +K   +D   LDL++K L+  PA RI++++AL H +F
Sbjct: 279 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 93/172 (54%), Gaps = 21/172 (12%)
Query: 34  PKSNIVKVADFGLARAFGVPVRIYTH---EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
           P+   VK+AD G AR F  P++        VVT WYRAPE+LLG++ Y+  +D+W+IGCI
Sbjct: 166 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI 225
Query: 91  FAEIATRKPLFQGDSE---------IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE- 140
           FAE+ T +P+F    E          DQL RIF V+  P + +W  + K+P++ T   + 
Sbjct: 226 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDF 285
Query: 141 ----WSNFCL----DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
               ++N  L    +KH    D     LL+K L   P  RI +E A++  YF
Sbjct: 286 RRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  109 bits (273), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 9/175 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCP 81
           L+ ++  +   S++ K+ DFGLAR            T  V T WYRAPE++L S+ Y+  
Sbjct: 152 LKPSNLLLNTTSDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 210
Query: 82  VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP-GVS-KLPDYKTTFP 139
           +D+WS+GCI AE+ + +P+F G   +DQL  I  +L +P++++   G++ K  +Y  + P
Sbjct: 211 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLP 270
Query: 140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLP 191
             +    ++   N D   LDLL+K L + P  RI  E AL H Y A   D +D P
Sbjct: 271 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEP 325

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 225 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 284
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y A   D +D P
Sbjct: 285 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEP 325

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 90/170 (52%), Gaps = 16/170 (9%)
Query: 39  VKVADFGLARAFGVPV----------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
           +KV DFGLAR                   T  V T WYRAPEV+L S +YS  +DVWS G
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 89  CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP---DYKTTFPEWSNFC 145
           CI AE+  R+P+F G     QL  IF ++ TP  DN     + P   +Y  + P +    
Sbjct: 211 CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAP 270
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLPK 192
           L+K    ++  G+DLL++ L++ PA RI A+ AL+H Y   + D  D P+
Sbjct: 271 LEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPE 320

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 90/170 (52%), Gaps = 16/170 (9%)
Query: 39  VKVADFGLARAFGVPV----------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
           +KV DFGLAR                   T  V T WYRAPEV+L S +YS  +DVWS G
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 89  CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP---DYKTTFPEWSNFC 145
           CI AE+  R+P+F G     QL  IF ++ TP  DN     + P   +Y  + P +    
Sbjct: 211 CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAP 270
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLPK 192
           L+K    ++  G+DLL++ L++ PA RI A+ AL+H Y   + D  D P+
Sbjct: 271 LEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPE 320

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 163 LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 223 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNA 282
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 104/210 (49%), Gaps = 31/210 (14%)
Query: 12  VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI 56
           V  + VK  T   LQA +FC         +KP      K +++K+ DFG AR    P   
Sbjct: 99  VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158
Query: 57  YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV 116
           Y  EV T WYR+PE+L+G  +Y  PVDVW+IGC+FAE+ +  PL+ G S++DQL+ I + 
Sbjct: 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKT 218
Query: 117 LTT---------PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIY 167
           L            T   + GV K+PD +   P      L+    N+    L LL+  L  
Sbjct: 219 LGDLIPRHQQVFSTNQYFSGV-KIPDPEDMEP------LELKFPNISYPALGLLKGCLHM 271
Query: 168 CPATRINAENALKHKYFADKTDLPKFAEYY 197
            P  R+  E  L H YF +  ++   A+ +
Sbjct: 272 DPTERLTCEQLLHHPYFENIREIEDLAKEH 301

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 39/186 (20%)
Query: 39  VKVADFGLARAF--------GVPVRI-------------YTHEVVTLWYRAPEVLLGSQR 77
           VKVADFGL+R+F         +P+ I              T  V T WYRAPE+LLGS +
Sbjct: 148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTK 207
Query: 78  YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-------- 129
           Y+  +D+WS+GCI  EI   KP+F G S ++QL RI  V+  P+ ++   +         
Sbjct: 208 YTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMI 267
Query: 130 ---------KLPDYKTTFPEWSNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENAL 179
                    +  + +  F +W N  L  + K + +++ LDLL+K L + P  RI+A +AL
Sbjct: 268 ESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDAL 327
Query: 180 KHKYFA 185
           KH + +
Sbjct: 328 KHPFVS 333

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 223 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNA 282
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 10/162 (6%)
Query: 39  VKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +K+ DFGLAR    P   +T      V T WYRAPE++L S+ Y+  +D+WS+GCI AE+
Sbjct: 167 LKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKN 152
            + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N
Sbjct: 226 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
            D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 10/162 (6%)
Query: 39  VKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +K+ DFGLAR    P   +T      V T WYRAPE++L S+ Y+  +D+WS+GCI AE+
Sbjct: 168 LKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKN 152
            + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N
Sbjct: 227 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 286
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
            D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 287 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 328

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 221 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 280
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 281 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 321

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 243 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 302
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 303 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 343

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 171 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 230
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 231 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 290
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 291 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 331

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 223 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 282
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 168 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 228 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 287
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 288 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 328

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 169 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 228
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 229 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 288
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 289 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 329

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 160 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 219
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 220 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 279
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 280 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 320

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 223 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 282
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 223 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 282
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 283 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 323

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 225 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 284
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 285 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 325

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 286
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 327

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++   N 
Sbjct: 243 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 302
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 303 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 343

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score =  107 bits (267), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 90/170 (52%), Gaps = 16/170 (9%)
Query: 39  VKVADFGLARAFGVPVRIYTHE----------VVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
           +KV DFGLAR         +            V T WYRAPEV+L S +YS  +DVWS G
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 89  CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP---DYKTTFPEWSNFC 145
           CI AE+  R+P+F G     QL  IF ++ TP  DN     + P   +Y  + P +    
Sbjct: 211 CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAP 270
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLPK 192
           L+K    ++  G+DLL++ L++ PA RI A+ AL+H Y   + D  D P+
Sbjct: 271 LEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPE 320

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score =  107 bits (266), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 39  VKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI AE+ 
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNL 153
           + +P+F G   +DQL  I  +L +P +++   +  L   +Y  + P  +    ++   N 
Sbjct: 221 SNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 280
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLP 191
           D   LDLL+K L + P  RI  E AL H Y   + D +D P
Sbjct: 281 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP 321

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score =  106 bits (265), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 39  VKVADFGLARAFGVPVRIYT----HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +K+ DFGLAR    P   +T      V T WYRAPE++L S+ Y+  +D+WS+GCI AE+
Sbjct: 183 LKICDFGLAR-IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV--SKLPDYKTTFPEWSNFCLDKHVKN 152
            + +P+F G   +DQL  I  +L +P++++   +   K  +Y  + P  +     K    
Sbjct: 242 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPK 301
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY---FADKTDLPKFAE 195
            D   LDLL++ L + P  RI  E AL H Y   + D TD P   E
Sbjct: 302 SDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEE 347

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score =  104 bits (259), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 13/166 (7%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           ++  +  +  K N +K+ DFG A+   +P       + + +YRAPE++LG+  Y+  +D+
Sbjct: 167 IKPQNLLVNSKDNTLKLCDFGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPSIDL 225
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFP---- 139
           WSIGC+F E+   KPLF G++ IDQL RI +++ TPT++    +   P Y +  FP    
Sbjct: 226 WSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM--IRMNPHYTEVRFPTLKA 283
Query: 140 -EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
            +W    L +   +L    +DLLE+ L Y P  RIN   A+ H +F
Sbjct: 284 KDWRKI-LPEGTPSL---AIDLLEQILRYEPDLRINPYEAMAHPFF 325

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +S +VK+ DFG AR    P  +Y  EV T WYRAPE+L+G  +Y   VDVW+IGC+  E+
Sbjct: 159 QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTT--PTEDN-------WPGVSKLPDYKTTFPEWSNFC 145
              +PLF GDS+IDQL+ I   L    P           + GV +LP+ K   P      
Sbjct: 219 FMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV-RLPEIKEREP------ 271
Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAEYY 197
           L++    L +  +DL +K L   P  R      L H +F     +  FAE +
Sbjct: 272 LERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ----MDGFAERF 319

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score =  100 bits (248), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 16/181 (8%)
Query: 23  LFLQATSFC---IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL 72
           L L + + C   IKP + +V       K+ DFG A+    P       + + +YRAPE++
Sbjct: 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYICSRYYRAPELI 203
Query: 73  LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW----PGV 128
            G+Q Y+  VD+WS+GCIFAE+   +P+F+GD+   QL  I RVL  P+ +      P  
Sbjct: 204 FGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSH 263
Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           + +  Y +    WSN   D  +K+  ++  DLL   L Y P  R+    AL H YF +  
Sbjct: 264 TDVDLYNSKGIPWSNVFSDHSLKDA-KEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322
Query: 189 D 189
           D
Sbjct: 323 D 323

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 99.8 bits (247), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +      VVT WYRAPEV+L   RY+  VD+WS+GCI AE+ T K
Sbjct: 167 LKILDFGLARQADSEM---XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTED--NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF+G   +DQL  I +V  TP  +        +  +Y    PE         + N    
Sbjct: 224 TLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPL 283
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
            ++LLEK L+     R+ A  AL H YF    D  D P+  +Y
Sbjct: 284 AVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKY 326

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P S ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 167 IKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICSRYYRAPELIFGATNYTTNI 223
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEW 141
           D+WS GC+ AE+   +PLF G+S IDQL  I +VL TP+ +    ++  P+Y +  FP+ 
Sbjct: 224 DIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN--PNYMEHKFPQI 281
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 K  +     D +DL+ + L Y P+ R+ A  AL H +F
Sbjct: 282 RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L +  Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+ ++  +   S + ++ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+
Sbjct: 157 LKPSNVAVNEDSEL-RILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 212
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWS 142
           WS+GCI AE+   K LF G   IDQL RI  V+ TP+ +    +S      Y  + P   
Sbjct: 213 WSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMP 272
Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
              L    +  +   +DLL + L+     R++A  AL H YF+   D  D P+   Y
Sbjct: 273 QKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAEPY 329

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+ ++  +   S + ++ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+
Sbjct: 157 LKPSNVAVNEDSEL-RILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 212
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWS 142
           WS+GCI AE+   K LF G   IDQL RI  V+ TP+ +    +S      Y  + P   
Sbjct: 213 WSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMP 272
Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
              L    +  +   +DLL + L+     R++A  AL H YF+   D  D P+   Y
Sbjct: 273 QKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAEPY 329

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+ ++  +   S + K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+
Sbjct: 157 LKPSNLAVNEDSEL-KILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 212
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWS 142
           WS+GCI AE+ T + LF G   IDQL  I R++ TP  +    +S     +Y  +  +  
Sbjct: 213 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 272
Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                      +   +DLLEK L+     RI A  AL H YFA   D
Sbjct: 273 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+ ++  +   S + K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+
Sbjct: 153 LKPSNLAVNEDSEL-KILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWS 142
           WS+GCI AE+ T + LF G   IDQL  I R++ TP  +    +S     +Y  +  +  
Sbjct: 209 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 268
Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                      +   +DLLEK L+     RI A  AL H YFA   D
Sbjct: 269 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 193 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP-----DYKTTFPEWSNFCLDKHVKNL 153
            LF G   I+QL +I R+  TP       +S++P     +Y  + P+             
Sbjct: 250 TLFPGTDHINQLQQIMRLTGTPPAS---VISRMPSHEARNYINSLPQMPKRNFADVFIGA 306
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
           +   +DLLEK L+     RI A  AL H YF+   D  D P+   Y
Sbjct: 307 NPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPDDEPESEPY 352

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 171 LKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 287
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 288 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 171 LKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 287
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 288 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 171 LKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 287
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 288 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +++ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+   K
Sbjct: 162 LRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL RI  V+ TP+ +    +S      Y  + P      L    +  +  
Sbjct: 219 ALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPL 278
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
            +DLL + L+     R++A  AL H YF+   D  D P+   Y
Sbjct: 279 AIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAEPY 321

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 170 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 286
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 287 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 160 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 276
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 184 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 300
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 301 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 175 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 232 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 291
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 292 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 187 LKILDFGLARHTDDEMXGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 244 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 303
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 304 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 176 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 292
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 293 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 183 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 240 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 299
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 300 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 174 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 231 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 290
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 291 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 323

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 175 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 232 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 291
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 292 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 169 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 285
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 286 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 170 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 286
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 287 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 184 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 300
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 301 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 160 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 276
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 187 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 244 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 303
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 304 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 170 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 286
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 287 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 90/210 (42%), Gaps = 54/210 (25%)
Query: 39  VKVADFGLARAFGVP----------------------VRIYTHEVVTLWYRAPEVLLGSQ 76
           VKV DFGLAR                            +  T  VVT WYRAPE++L  +
Sbjct: 168 VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQE 227
Query: 77  RYSCPVDVWSIGCIFAEI-----------ATRKPLFQGD-----------------SEID 108
            Y+  +D+WS GCIFAE+             R PLF G                  S  D
Sbjct: 228 NYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRD 287
Query: 109 QLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLI 166
           QL  IF ++ TPTED+   ++K  +  Y   FP      L +   ++  DG++LLE  L 
Sbjct: 288 QLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLK 347
Query: 167 YCPATRINAENALKHKYFAD--KTDLPKFA 194
           + P  RI  + AL H Y  D  K  L  F+
Sbjct: 348 FNPNKRITIDQALDHPYLKDVRKKKLENFS 377

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 169 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 285
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 286 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 176 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 292
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 293 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 176 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 292
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 293 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 166 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 282
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 283 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 169 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 285
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 286 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 166 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 282
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 283 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 169 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 285
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 286 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 163 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 220 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 279
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 280 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 312

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 171 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 287
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 288 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 183 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 240 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 299
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 300 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 161 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 218 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 277
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 278 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 160 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 276
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +   T  V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEM---TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 161 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 218 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 277
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 278 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 162 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 219 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 278
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 279 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 311

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 166 LKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 282
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 283 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 39  VKVADFGLARAF-GVPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +K+ DFG+AR     P       T  V T WYRAPE++L    Y+  +D+WS+GCIF E+
Sbjct: 197 LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 256
Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTED--NWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
             R+ LF G + + QL  I  VL TP+       G  ++  Y  + P       +     
Sbjct: 257 LARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPG 316
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            D+  L LL + L + P+ RI+A  AL+H + A   D
Sbjct: 317 ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 39  VKVADFGLARAF-GVPVR---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +K+ DFG+AR     P       T  V T WYRAPE++L    Y+  +D+WS+GCIF E+
Sbjct: 198 LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 257
Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTED--NWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
             R+ LF G + + QL  I  VL TP+       G  ++  Y  + P       +     
Sbjct: 258 LARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPG 317
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            D+  L LL + L + P+ RI+A  AL+H + A   D
Sbjct: 318 ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 354

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ D+GLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDYGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  +   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+ ++  +   S + K+ DFGL R     +  Y   V T WYRAPE++L    Y+  VD+
Sbjct: 151 LKPSNLAVNEDSEL-KILDFGLCRHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDI 206
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWS 142
           WS+GCI AE+ T + LF G   IDQL  I R++ TP  +    +S     +Y  +  +  
Sbjct: 207 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 266
Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                      +   +DLLEK L+     RI A  AL H YFA   D
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  +   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 160 LKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 276
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 93.2 bits (230), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  +   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 93.2 bits (230), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHE------VVTLWYRAPEVLLGSQRY 78
           L+  +  I  +  ++K+ DFGLAR        Y+H+      +VT WYR+P +LL    Y
Sbjct: 146 LKPANLFINTEDLVLKIGDFGLARIMDPH---YSHKGHLSEGLVTKWYRSPRLLLSPNNY 202
Query: 79  SCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVL-TTPTEDNWPGVSKLPDYKTT 137
           +  +D+W+ GCIFAE+ T K LF G  E++Q+  I   +     ED    +S +P Y   
Sbjct: 203 TKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRN 262
Query: 138 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 185
                +  L + +  + ++ +D LE+ L + P  R+ AE AL H Y +
Sbjct: 263 DMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +      V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 184 LKILDFGLARHTDDEM---XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL 300
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 301 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 94/221 (42%), Gaps = 57/221 (25%)
Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIY-------------------------THEVVTLW 65
           C+  +   VK+ DFGLAR       I+                         T  VVT W
Sbjct: 162 CLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRW 221
Query: 66  YRAPEVLLGSQRYSCPVDVWSIGCIFAEI-----------ATRKPLFQGD---------- 104
           YRAPE++L  + Y+  +D+WS GCIFAE+             R PLF G           
Sbjct: 222 YRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHN 281
Query: 105 -------SEIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWSNFCLDKHVKNLDQ 155
                  S  DQL  IF V+ TP E++   ++K  +  Y   FP      L K   ++ +
Sbjct: 282 SKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKKYSSISK 341
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFAD--KTDLPKFA 194
           +G+DLLE  L +    RI  + AL H Y  D  K +L  F+
Sbjct: 342 EGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFS 382

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+  FGLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILGFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ D GLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDAGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ D GLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDRGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ D GLAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDGGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 90.9 bits (224), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DF LAR     +  Y   V T WYRAPE++L    Y+  VD+WS+GCI AE+ T +
Sbjct: 164 LKILDFYLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            LF G   IDQL  I R++ TP  +    +S     +Y  +  +             +  
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 280
Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            +DLLEK L+     RI A  AL H YFA   D
Sbjct: 281 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 152 LKP-SNIVVKSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT----------PTEDNWPGVSKLPDY 134
           WS+GCI  E+   K LF G   IDQ  ++   L T          PT  N+  V   P Y
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKY 266
Query: 135 KT-TFPEW---SNFCLD-KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
              TFP+    S F  D +H K       DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 267 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 90.1 bits (222), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDXTLKILDFGLA 173
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 174 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 289
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 290 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 90.1 bits (222), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   VVT WYRAPEV+L    Y+  VD+WS+GCI AE+ T K
Sbjct: 165 LKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD-----YKTTFPEWSNFCLDKHVKNL 153
            LF+G   +DQL +I +V   P  +    V KL D     Y  + P+       +     
Sbjct: 222 TLFKGKDYLDQLTQILKVTGVPGTEF---VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA 278
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                DLLEK L      R+ A  AL H +F
Sbjct: 279 SPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLAR     +  Y   VVT WYRAPEV+L    Y+  VD+WS+GCI AE+ T K
Sbjct: 183 LKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD-----YKTTFPEWSNFCLDKHVKNL 153
            LF+G   +DQL +I +V   P  +    V KL D     Y  + P+       +     
Sbjct: 240 TLFKGKDYLDQLTQILKVTGVPGTEF---VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA 296
Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                DLLEK L      R+ A  AL H +F
Sbjct: 297 SPQAADLLEKMLELDVDKRLTAAQALTHPFF 327

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 174 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 289
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 290 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 211
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 212 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 269
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 270 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 327
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 328 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 359

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 152 LKP-SNIVVKSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT----------PTEDNWPGVSKLPDY 134
           WS+GCI  E+   K LF G   IDQ  ++   L T          PT  N+  V   P Y
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKY 266
Query: 135 KT-TFPEW---SNFCLD-KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
              TFP+    S F  D +H K       DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 267 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 174
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 175 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 232
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 233 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 290
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 291 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 322

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 174
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 175 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 232
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 233 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 290
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 291 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 322

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 114 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 172
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 173 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 230
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 231 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 288
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 289 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 320

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 152 LKP-SNIVVKSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT----------PTEDNWPGVSKLPDY 134
           WS+GCI  E+   K LF G   IDQ  ++   L T          PT  N+  V   P Y
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKY 266
Query: 135 KT-TFPEW---SNFCLD-KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
              TFP+    S F  D +H K       DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 267 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 174 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 289
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 290 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 89/175 (50%), Gaps = 27/175 (15%)
Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 145 LKP-SNIVVKSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 201
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT----------PTEDNWPGVSKLPDY 134
           WS+GCI  E+   K LF G   IDQ  ++   L T          PT  N+  V   P Y
Sbjct: 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKY 259
Query: 135 KT-TFPEW---SNFCLD-KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
              TFP+    S F  D +H K       DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 260 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 211
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 212 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 269
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 270 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 327
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 328 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 359

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 89.7 bits (221), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 167
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 168 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 226 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 283
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 284 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 315

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 89.7 bits (221), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 167
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 168 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 226 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 283
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 284 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 315

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 89.7 bits (221), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 108 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 166
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 167 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224
Query: 108 DQLFRIFRVLTT----------PTEDNWPGVSKLPDYKT-TFPEW---SNFCLD-KHVKN 152
           DQ  ++   L T          PT  N+  V   P Y   TFP+    S F  D +H K 
Sbjct: 225 DQWNKVIEQLGTPCPEFMKKLQPTVRNY--VENRPKYAGLTFPKLFPDSLFPADSEHNKL 282
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 DLL K L+  PA RI+ ++AL+H Y 
Sbjct: 283 KASQARDLLSKMLVIDPAKRISVDDALQHPYI 314

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P   Y   + + +YRAPE++ G+  Y+  +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 204
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFAFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P   Y   + + +YRAPE++ G+  Y+  +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 204
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P   Y   + + +YRAPE++ G+  Y+  +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 204
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P   Y   + + +YRAPE++ G+  Y+  +
Sbjct: 161 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 217
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 218 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 275
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 276 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 324

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P   Y   + + +YRAPE++ G+  Y+  +
Sbjct: 176 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 232
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 233 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 290
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 291 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 339

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P   Y   + + +YRAPE++ G+  Y+  +
Sbjct: 153 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 209
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 210 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 267
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 268 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 316

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P   Y   + + +YRAPE++ G+  Y+  +
Sbjct: 186 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 242
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 243 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 300
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 301 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 349

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P   Y   + + +YRAPE++ G+  Y+  +
Sbjct: 184 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 240
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 241 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 298
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 299 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 347

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P   Y   + + +YRAPE++ G+  Y+  +
Sbjct: 182 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 238
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 239 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 296
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 297 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P   Y   + + +YRAPE++ G+  Y+  +
Sbjct: 227 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI 283
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 284 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 341
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 342 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 390

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 204
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFAFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 85/177 (48%), Gaps = 31/177 (17%)
Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR       + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 150 LKP-SNIVVKSDCTLKILDFGLARTASTNF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 206
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED-----------------NWPG 127
           WS+GCI  E+     +FQG   IDQ  ++   L TP+ +                  +PG
Sbjct: 207 WSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPG 266
Query: 128 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           ++    ++  FP+W      +  K       DLL K L+  P  RI+ + AL+H Y 
Sbjct: 267 IA----FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 149 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 205
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 206 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 263
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 264 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 312

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 204
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 88/216 (40%), Gaps = 60/216 (27%)
Query: 31  CIKPKSNIVKVADFGLARAFGVP---------------------------VRIYTHEVVT 63
           C+  +   VKV DFGLAR    P                            R  T  VVT
Sbjct: 187 CLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVT 246
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI-----------ATRKPLFQGDS------- 105
            WYRAPE++L  + Y+  +DVWSIGCIFAE+           A R PLF G S       
Sbjct: 247 RWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPD 306
Query: 106 -------------EIDQLFRIFRVLTTPTEDNWPGVSK--LPDYKTTFPEWSNFCLDKHV 150
                          DQL  IF +L TP+E++   + K     Y   FP+     L +  
Sbjct: 307 QKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF 366
Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                D + LL++ L++ P  RI     L H +F +
Sbjct: 367 PASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 204
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 152 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 208
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 209 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 266
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 267 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 315

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 204
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 262
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 160 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 216
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 217 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 274
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 275 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 323

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 167 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 223
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 224 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 281
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 282 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 330

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 160 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 216
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 217 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 274
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 275 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 323

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 87.0 bits (214), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 156 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 212
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 213 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 270
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 271 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 319

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 87.0 bits (214), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           ++  +  + P + ++K+ DFG A+    G P       + + +YRAPE++ G+  Y+  +
Sbjct: 182 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSI 238
Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEW 141
           DVWS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+ 
Sbjct: 239 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQI 296
Query: 142 SNFCLDKHVK-NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 K  +     + + L  + L Y P  R+    A  H +F +  D
Sbjct: 297 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 86.7 bits (213), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 85/177 (48%), Gaps = 31/177 (17%)
Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR       + T  VVT +YRAPEV+LG   Y+  VD+
Sbjct: 152 LKP-SNIVVKSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILG-MGYAANVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED-----------------NWPG 127
           WS+GCI  E+     +FQG   IDQ  ++   L TP+ +                  +PG
Sbjct: 209 WSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPG 268
Query: 128 VSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +     ++  FP+W      +  K       DLL K L+  P  RI+ + AL+H Y 
Sbjct: 269 IK----FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 97/214 (45%), Gaps = 37/214 (17%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    +   EVVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 174 RTAGTSF-MMEPEVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVCHKILFPGRDYI 231
Query: 108 DQLFRIFRVLTTPTEDNWPGVSK-----LPDYKTTFPEWSNFCLDK------------HV 150
           DQ  ++   L TP     P   K     + +Y    P+++ +  +K            H 
Sbjct: 232 DQWNKVIEQLGTPC----PAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHN 287
Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           K       DLL K L+   + RI+ + AL+H Y 
Sbjct: 288 KLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    +   EVVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 174 RTAGTSF-MMEPEVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 231
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
           DQ  ++   L TP  +    +   +  Y    P+++ +  +K            H K   
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
               DLL K L+   + RI+ + AL+H Y 
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+ ++  +K  + + K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 152 LKPSNIVVKSDATL-KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
           WS+GCI  E+     LF G   IDQ  ++   L TP+ +    +   +  Y    P+++ 
Sbjct: 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +  +K            H K       DLL K L+   + RI+ + AL+H Y 
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+ ++  +K  + + K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 152 LKPSNIVVKSDATL-KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
           WS+GCI  E+     LF G   IDQ  ++   L TP+ +    +   +  Y    P+++ 
Sbjct: 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +  +K            H K       DLL K L+   + RI+ + AL+H Y 
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+ ++  +K  + + K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 152 LKPSNIVVKSDATL-KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
           WS+GCI  E+     LF G   IDQ  ++   L TP+ +    +   +  Y    P+++ 
Sbjct: 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +  +K            H K       DLL K L+   + RI+ + AL+H Y 
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 84.0 bits (206), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+     LF G   I
Sbjct: 174 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
           DQ  ++   L TP+ +    +   +  Y    P+++ +  +K            H K   
Sbjct: 232 DQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
               DLL K L+   + RI+ + AL+H Y 
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 83.6 bits (205), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 120 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 178
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 179 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 236
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
           DQ  ++   L TP  +    +   +  Y    P+++ +  +K            H K   
Sbjct: 237 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 296
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
               DLL K L+   + RI+ + AL+H Y 
Sbjct: 297 SQARDLLSKMLVIDASKRISVDEALQHPYI 326

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 83.6 bits (205), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 167
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+   K LF G   I
Sbjct: 168 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 225
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
           DQ  ++   L TP  +    +   +  Y    P+++ +  +K            H K   
Sbjct: 226 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 285
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
               DLL K L+   + RI+ + AL+H Y 
Sbjct: 286 SQARDLLSKMLVIDASKRISVDEALQHPYI 315

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 83.6 bits (205), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T EVVT +YRAPEV+LG   Y   VD+WS+GCI  E+     LF G   I
Sbjct: 174 RTAGTSF-MMTPEVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
           DQ  ++   L TP  +    +   +  Y    P+++ +  +K            H     
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKA 291
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
               DLL K L+   + RI+ + AL+H Y 
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 83.6 bits (205), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNIV       K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 152 LKP-SNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
           WS+GCI  E+     LF G   IDQ  ++   L TP+ +    +   +  Y    P+++ 
Sbjct: 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +  +K            H K       DLL K L+   + RI+ + AL+H Y 
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 83.6 bits (205), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +N + + DF LAR         TH V   WYRAPE+++  + ++  VD+WS GC+ AE+ 
Sbjct: 170 NNDITICDFNLAREDTADAN-KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDY-KTTFPEWSNFCLDKHVKN 152
            RK LF+G +  +QL +I  V+ TP  ++    S     DY + +            V  
Sbjct: 229 NRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
            D   LDL+ K L + P  RI+ E AL+H YF
Sbjct: 289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 83.2 bits (204), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           +N + + DF LAR         TH V   WYRAPE+++  + ++  VD+WS GC+ AE+ 
Sbjct: 170 NNDITICDFNLAREDTADAN-KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDY-KTTFPEWSNFCLDKHVKN 152
            RK LF+G +  +QL +I  V+ TP  ++    S     DY + +            V  
Sbjct: 229 NRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
            D   LDL+ K L + P  RI+ E AL+H YF
Sbjct: 289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 174
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+     LF G   I
Sbjct: 175 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 232
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
           DQ  ++   L TP  +    +   +  Y    P+++ +  +K            H K   
Sbjct: 233 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 292
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
               DLL K L+   + RI+ + AL+H Y 
Sbjct: 293 SQARDLLSKMLVIDASKRISVDEALQHPYI 322

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 173
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    + T  VVT +YRAPEV+LG   Y   VD+WS+GCI  E+     LF G   I
Sbjct: 174 RTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
           DQ  ++   L TP  +    +   +  Y    P+++ +  +K            H K   
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
               DLL K L+   + RI+ + AL+H Y 
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 29  SFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
           +  I  +   +++ D+GLA  F  P + Y   V + +++ PE+L+  Q Y   +D+WS+G
Sbjct: 162 NVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG 220
Query: 89  CIFAE-IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-----PDYKTTFPE-- 140
           C+ A  I  R+P F G    DQL RI +VL   TE+ +  + K      P +     +  
Sbjct: 221 CMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYGYLKKYHIDLDPHFNDILGQHS 278
Query: 141 ---WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
              W NF   ++   +  + LDLL+K L Y    R+ A+ A++H YF
Sbjct: 279 RKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 14/171 (8%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           ++  +  I  +   +++ D+GLA  F  P + Y   V + +++ PE+L+  Q Y   +D+
Sbjct: 163 VKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDM 221
Query: 85  WSIGCIFAE-IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-----PDYKTTF 138
           WS+GC+ A  I  R+P F G    DQL RI +VL   TE+ +  + K      P +    
Sbjct: 222 WSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYGYLKKYHIDLDPHFNDIL 279
Query: 139 PE-----WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
            +     W NF   ++   +  + LDLL+K L Y    R+ A+ A++H YF
Sbjct: 280 GQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 182
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 243 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 300
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 301 DKLLRYDHQSRLTAREAMEHPYF 323

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 123 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 181
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 241
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 242 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 299
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 300 DKLLRYDHQSRLTAREAMEHPYF 322

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 182
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 243 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 300
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 301 DKLLRYDHQSRLTAREAMEHPYF 323

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 130 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 188
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 189 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 248
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 249 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 306
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 307 DKLLRYDHQSRLTAREAMEHPYF 329

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYH 183
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA-EFYH 183
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 9   WEQVGTYQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGV 52
           ++ +  Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYH 183
Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLF 111
           P + Y   V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 112 RIFRVLTTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLL 161
           RI +VL   TED +  + K      P +     + +   W  F   ++   +  + LD L
Sbjct: 244 RIAKVLG--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 162 EKTLIYCPATRINAENALKHKYF 184
           +K L Y   +R+ A  A++H YF
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+ ++  +K  + + K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 152 LKPSNIVVKSDATL-KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
           WS+G I  E+     LF G   IDQ  ++   L TP+ +    +   +  Y    P+++ 
Sbjct: 209 WSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +  +K            H K       DLL K L+   + RI+ + AL+H Y 
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+ ++  +K  + + K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 152 LKPSNIVVKSDATL-KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDI 208
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSN 143
           WS+G I  E+     LF G   IDQ  ++   L TP+ +    +   +  Y    P+++ 
Sbjct: 209 WSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
Query: 144 FCLDK------------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +  +K            H K       DLL K L+   + RI+ + AL+H Y 
Sbjct: 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 1   FCNLIQLEWEQVGT----YQVKITTRLFLQATSFC--IKPKSNIV-------KVADFGLA 47
            C +IQ+E +        YQ+    +    A      +KP SNIV       K+ DFGLA
Sbjct: 117 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP-SNIVVKSDCTLKILDFGLA 175
Query: 48  RAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI 107
           R  G    +    VVT +YRAPEV+LG   Y   VD+WS+GCI  E+     LF G   I
Sbjct: 176 RTAGTSFMMVPF-VVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 233
Query: 108 DQLFRIFRVLTTPTEDNWPGVS-KLPDYKTTFPEWSNFCLDK------------HVKNLD 154
           DQ  ++   L TP  +    +   +  Y    P+++ +  +K            H K   
Sbjct: 234 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 293
Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYF 184
               DLL K L+   + RI+ + AL+H Y 
Sbjct: 294 SQARDLLSKMLVIDASKRISVDEALQHPYI 323

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 80.9 bits (198), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 30/197 (15%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN 189
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL RI +VL
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 118 TTPTEDNWPGVSKL-----PDY-----KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIY 167
              TED +  + K      P +     + +   W  F   ++   +  + LD L+K L Y
Sbjct: 250 G--TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRY 307
Query: 168 CPATRINAENALKHKYF 184
              +R+ A  A++H YF
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 39/191 (20%)
Query: 34  PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           PK + +K+ DFG +   G   RIY   + + +YR+PEVLLG   Y   +D+WS+GCI  E
Sbjct: 195 PKRSAIKIVDFGSSCQLGQ--RIY-QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVE 250
Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTP---------------------------TEDNW- 125
           + T +PLF G +E+DQ+ +I  VL  P                           T+D   
Sbjct: 251 MHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKR 310
Query: 126 ----PGVSKLPD---YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
               PG  KL +    +T  P         H         DL+ + L Y P TRI    A
Sbjct: 311 EYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYA 370
Query: 179 LKHKYFADKTD 189
           L+H +F    D
Sbjct: 371 LQHSFFKKTAD 381

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 39/191 (20%)
Query: 34  PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           PK + +K+ DFG +   G   RIY   + + +YR+PEVLLG   Y   +D+WS+GCI  E
Sbjct: 176 PKRSAIKIVDFGSSCQLGQ--RIY-QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVE 231
Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTP---------------------------TEDNW- 125
           + T +PLF G +E+DQ+ +I  VL  P                           T+D   
Sbjct: 232 MHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKR 291
Query: 126 ----PGVSKLPD---YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
               PG  KL +    +T  P         H         DL+ + L Y P TRI    A
Sbjct: 292 EYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYA 351
Query: 179 LKHKYFADKTD 189
           L+H +F    D
Sbjct: 352 LQHSFFKKTAD 362

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 83/191 (43%), Gaps = 39/191 (20%)
Query: 34  PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           PK   +K+ DFG +   G   RIY   + + +YR+PEVLLG   Y   +D+WS+GCI  E
Sbjct: 195 PKRXAIKIVDFGSSCQLGQ--RIY-QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVE 250
Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTP---------------------------TEDNW- 125
           + T +PLF G +E+DQ+ +I  VL  P                           T+D   
Sbjct: 251 MHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKR 310
Query: 126 ----PGVSKLPD---YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
               PG  KL +    +T  P         H         DL+ + L Y P TRI    A
Sbjct: 311 EYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYA 370
Query: 179 LKHKYFADKTD 189
           L+H +F    D
Sbjct: 371 LQHSFFKKTAD 381

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 146 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 204
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+FA +  RK P F G    DQL +I +VL
Sbjct: 205 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 264
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
            T   + +         P +  L    +  P W  F    +   +  + +D L+K L Y 
Sbjct: 265 GTDGLNAYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 323
Query: 169 PATRINAENALKHKYF 184
              R+ A  A+ H YF
Sbjct: 324 HQERLTALEAMTHPYF 339

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+FA +  RK P F G    DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
            T   + +         P +  L    +  P W  F    +   +  + +D L+K L Y 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
              R+ A  A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+FA +  RK P F G    DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
            T   + +         P +  L    +  P W  F    +   +  + +D L+K L Y 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
              R+ A  A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 126 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 184
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+FA +  RK P F G    DQL +I +VL
Sbjct: 185 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 244
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
            T   + +         P +  L    +  P W  F    +   +  + +D L+K L Y 
Sbjct: 245 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 303
Query: 169 PATRINAENALKHKYF 184
              R+ A  A+ H YF
Sbjct: 304 HQERLTALEAMTHPYF 319

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+FA +  RK P F G    DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
            T   + +         P +  L    +  P W  F    +   +  + +D L+K L Y 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
              R+ A  A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+FA +  RK P F G    DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
            T   + +         P +  L    +  P W  F    +   +  + +D L+K L Y 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
              R+ A  A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+FA +  RK P F G    DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
            T   + +         P +  L    +  P W  F    +   +  + +D L+K L Y 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
              R+ A  A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 126 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 184
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+FA +  RK P F G    DQL +I +VL
Sbjct: 185 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 244
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
            T   + +         P +  L    +  P W  F    +   +  + +D L+K L Y 
Sbjct: 245 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 303
Query: 169 PATRINAENALKHKYF 184
              R+ A  A+ H YF
Sbjct: 304 HQERLTALEAMTHPYF 319

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 127 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 185
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+FA +  RK P F G    DQL +I +VL
Sbjct: 186 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 245
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
            T   + +         P +  L    +  P W  F    +   +  + +D L+K L Y 
Sbjct: 246 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 304
Query: 169 PATRINAENALKHKYF 184
              R+ A  A+ H YF
Sbjct: 305 HQERLTALEAMTHPYF 320

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 15  YQVKITTRLFLQATSFC---------IKPKSNIV-------KVADFGLARAFGVPVRIYT 58
           Y ++      L+A  +C         +KP + ++       ++ D+GLA  F  P + Y 
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN 183
Query: 59  HEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVL 117
             V + +++ PE+L+  Q Y   +D+WS+GC+FA +  RK P F G    DQL +I +VL
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 118 TTPTEDNW---------PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYC 168
            T   + +         P +  L    +  P W  F    +   +  + +D L+K L Y 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYD 302
Query: 169 PATRINAENALKHKYF 184
              R+ A  A+ H YF
Sbjct: 303 HQERLTALEAMTHPYF 318

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 34/187 (18%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +KV DFG   +     R+YT  + + +YRAPEV+LG+ RY  P+D+WS+GCI AE+ T  
Sbjct: 241 IKVIDFG--SSCYEHQRVYT-XIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGY 296
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTE---------DNWPGVSKLPDY--KTTFPEWSNFCLD 147
           PL  G+ E DQL  +  +L  P++          N+      P Y   TT  + S     
Sbjct: 297 PLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNG 356
Query: 148 KHVKNLDQDG-------------------LDLLEKTLIYCPATRINAENALKHKYFADKT 188
              +     G                   LD L++ L + PA R+    AL+H +   + 
Sbjct: 357 GRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL 416
Query: 189 DLPKFAE 195
             P   E
Sbjct: 417 PKPPTGE 423

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 70.1 bits (170), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +KV DFG   +     R+YT  + + +YRAPEV+LG+ RY  P+D+WS+GCI AE+ T  
Sbjct: 241 IKVIDFG--SSCYEHQRVYT-XIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGY 296
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTE 122
           PL  G+ E DQL  +  +L  P++
Sbjct: 297 PLLPGEDEGDQLACMIELLGMPSQ 320

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 81/192 (42%), Gaps = 44/192 (22%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVV-----TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           +KV DFG +         Y H+ V     + +YRAPEV+LG+ RY  P+D+WS+GCI AE
Sbjct: 241 IKVIDFGSS--------CYEHQRVYXXIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAE 291
Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTE---------DNWPGVSKLPDY--KTTFPEWS 142
           + T  PL  G+ E DQL  +  +L  P +          N+      P Y   TT  + S
Sbjct: 292 LLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGS 351
Query: 143 NFCLDKHVKNLDQDG-------------------LDLLEKTLIYCPATRINAENALKHKY 183
                   +     G                   LD L++ L + PA R+    AL+H +
Sbjct: 352 VVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPW 411
Query: 184 FADKTDLPKFAE 195
              +   P   E
Sbjct: 412 LRRRLPKPPTGE 423

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 28/152 (18%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   +++ DFGL+  F    ++   ++ T +Y APEVL G+    C  DVWS G I  
Sbjct: 168 KSKDANIRIIDFGLSTHFEASKKM-KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVILY 224
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +  P F G +E D L ++ +                  Y    P+W         K 
Sbjct: 225 ILLSGCPPFNGANEYDILKKVEK----------------GKYTFELPQW---------KK 259
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + +   DL+ K L Y P+ RI+A +AL H++ 
Sbjct: 260 VSESAKDLIRKMLTYVPSMRISARDALDHEWI 291

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 28/152 (18%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   +++ DFGL+  F    ++   ++ T +Y APEVL G+    C  DVWS G I  
Sbjct: 162 KSKDANIRIIDFGLSTHFEASKKM-KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVILY 218
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +  P F G +E D L ++ +                  Y    P+W         K 
Sbjct: 219 ILLSGCPPFNGANEYDILKKVEK----------------GKYTFELPQW---------KK 253
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + +   DL+ K L Y P+ RI+A +AL H++ 
Sbjct: 254 VSESAKDLIRKMLTYVPSMRISARDALDHEWI 285

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 28/152 (18%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   +++ DFGL+  F    ++   ++ T +Y APEVL G+    C  DVWS G I  
Sbjct: 185 KSKDANIRIIDFGLSTHFEASKKM-KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVILY 241
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +  P F G +E D L ++ +                  Y    P+W         K 
Sbjct: 242 ILLSGCPPFNGANEYDILKKVEK----------------GKYTFELPQW---------KK 276
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + +   DL+ K L Y P+ RI+A +AL H++ 
Sbjct: 277 VSESAKDLIRKMLTYVPSMRISARDALDHEWI 308

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 28/152 (18%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   +++ DFGL+  F    ++   ++ T +Y APEVL G+    C  DVWS G I  
Sbjct: 186 KSKDANIRIIDFGLSTHFEASKKM-KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVILY 242
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +  P F G +E D L ++ +                  Y    P+W         K 
Sbjct: 243 ILLSGCPPFNGANEYDILKKVEK----------------GKYTFELPQW---------KK 277
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + +   DL+ K L Y P+ RI+A +AL H++ 
Sbjct: 278 VSESAKDLIRKMLTYVPSMRISARDALDHEWI 309

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 28/152 (18%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   +++ DFGL+  F    +    ++ T +Y APEVL G+    C  DVWS G I  
Sbjct: 162 KSKDANIRIIDFGLSTHFEASKKX-KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVILY 218
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +  P F G +E D L ++ +                  Y    P+W         K 
Sbjct: 219 ILLSGCPPFNGANEYDILKKVEK----------------GKYTFELPQW---------KK 253
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + +   DL+ K L Y P+ RI+A +AL H++ 
Sbjct: 254 VSESAKDLIRKXLTYVPSXRISARDALDHEWI 285

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   +K+ DFGL+  F    ++    + T +Y APEVL G+    C  DVWS G I  
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRGTYDEKC--DVWSAGVILY 213
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +  P F G +E D L R+                +   Y    P+W         + 
Sbjct: 214 ILLSGTPPFYGKNEYDILKRV----------------ETGKYAFDLPQW---------RT 248
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH 181
           +  D  DL+ K L + P+ RI A   L+H
Sbjct: 249 ISDDAKDLIRKMLTFHPSLRITATQCLEH 277

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   +K+ DFGL+  F    ++    + T +Y APEVL G+    C  DVWS G I  
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRGTYDEKC--DVWSAGVILY 213
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +  P F G +E D L R+                +   Y    P+W         + 
Sbjct: 214 ILLSGTPPFYGKNEYDILKRV----------------ETGKYAFDLPQW---------RT 248
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH 181
           +  D  DL+ K L + P+ RI A   L+H
Sbjct: 249 ISDDAKDLIRKMLTFHPSLRITATQCLEH 277

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 35/168 (20%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   +K+ DFGL+  F    ++    + T +Y APEVL G+    C  DVWS G I  
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRGTYDEKC--DVWSAGVILY 213
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +  P F G +E D L R+                +   Y    P+W         + 
Sbjct: 214 ILLSGTPPFYGKNEYDILKRV----------------ETGKYAFDLPQW---------RT 248
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH----KYFADK---TDLPKF 193
           +  D  DL+ K L + P+ RI A   L+H    KY ++    +DLP  
Sbjct: 249 ISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSL 296

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 69/171 (40%), Gaps = 29/171 (16%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
           KS  V+V DFG A         + HE     V T  YRAPEV+L    +S P DVWSIGC
Sbjct: 191 KSTAVRVVDFGSA--------TFDHEHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGC 241
Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW-SNFCLDK 148
           I  E      LFQ     + L  + R+L            K   +     +W  N    +
Sbjct: 242 IIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGR 301
Query: 149 HVK--------------NLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 185
           +V+                     DL+E  L Y PA R+    AL+H +FA
Sbjct: 302 YVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFA 352

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 32/151 (21%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K  ++K+ DFGL+  F    ++    + T +Y APEVL   ++Y    DVWSIG I  
Sbjct: 172 KEKDALIKIVDFGLSAVFENQKKM-KERLGTAYYIAPEVL--RKKYDEKCDVWSIGVILF 228
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF--PEWSNFCLDKHV 150
            +    P F G  + DQ   I R              K+   K TF  PEW         
Sbjct: 229 ILLAGYPPFGG--QTDQ--EILR--------------KVEKGKYTFDSPEW--------- 261
Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKH 181
           KN+ +   DL+++ L +    RI+A+ AL+H
Sbjct: 262 KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
           K+  ++VADFG A         + HE     V T  YR PEV+L    ++ P DVWSIGC
Sbjct: 209 KNTSIRVADFGSA--------TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGC 259
Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLT-TPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
           I  E      LFQ     + L  + ++L   P+        +   YK       N    +
Sbjct: 260 ILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR 319
Query: 149 HVKN--------LDQDGL------DLLEKTLIYCPATRINAENALKHKYFADKT 188
           +VK         + QD L      DL+ + L + PA RI    AL H +FA  T
Sbjct: 320 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 373

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 23/163 (14%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +KV DFG A         ++  V T  YRAPEV+L +  +S P DVWSIGCI  E     
Sbjct: 176 IKVVDFGSA---TYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGF 231
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN--------------- 143
            +F      + L  + R+L    +       K   +     +W                 
Sbjct: 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPL 291
Query: 144 --FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
             F L + V++  +   DL++K L Y PA RI    ALKH +F
Sbjct: 292 KEFMLSQDVEH--ERLFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
           K+  ++VADFG A         + HE     V T  YR PEV+L    ++ P DVWSIGC
Sbjct: 186 KNTSIRVADFGSA--------TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGC 236
Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLT-TPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
           I  E      LFQ     + L  + ++L   P+        +   YK       N    +
Sbjct: 237 ILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR 296
Query: 149 HVKN--------LDQDGL------DLLEKTLIYCPATRINAENALKHKYFADKT 188
           +VK         + QD L      DL+ + L + PA RI    AL H +FA  T
Sbjct: 297 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 350

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
           K+  ++VADFG A         + HE     V T  YR PEV+L    ++ P DVWSIGC
Sbjct: 177 KNTSIRVADFGSA--------TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGC 227
Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLT-TPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
           I  E      LFQ     + L  + ++L   P+        +   YK       N    +
Sbjct: 228 ILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR 287
Query: 149 HVKN--------LDQDGL------DLLEKTLIYCPATRINAENALKHKYFADKT 188
           +VK         + QD L      DL+ + L + PA RI    AL H +FA  T
Sbjct: 288 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 341

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +KV DFG A         ++  V    YRAPEV+L +  +S P DVWSIGCI  E     
Sbjct: 176 IKVVDFGSA---TYDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGF 231
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN--------------- 143
            +F      + L  + R+L    +       K   +     +W                 
Sbjct: 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPL 291
Query: 144 --FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
             F L + V++  +   DL++K L Y PA RI    ALKH +F
Sbjct: 292 KEFMLSQDVEH--ERLFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 37/169 (21%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K +  ++K+ DFGL+  F V  ++    + T +Y APEVL   ++Y    DVWS G I  
Sbjct: 140 KSRDALIKIVDFGLSAHFEVGGKM-KERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILY 196
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF--PEWSNFCLDKHV 150
            +    P F G ++ + L R+ +                   K +F  P+W+        
Sbjct: 197 ILLCGYPPFGGQTDQEILKRVEK------------------GKFSFDPPDWT-------- 230
Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKH----KYFADK-TDLPKFA 194
             +  +   L++  L Y P+ RI+AE AL H    K+ + K TD+ K A
Sbjct: 231 -QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHA 278

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 28/149 (18%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K +  ++K+ DFGL+  F V  ++    + T +Y APEVL   ++Y    DVWS G I  
Sbjct: 157 KSRDALIKIVDFGLSAHFEVGGKM-KERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILY 213
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            +    P F G ++ + L R+ +                  +    P+W+          
Sbjct: 214 ILLCGYPPFGGQTDQEILKRVEK----------------GKFSFDPPDWT---------Q 248
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH 181
           +  +   L++  L Y P+ RI+AE AL H
Sbjct: 249 VSDEAKQLVKLMLTYEPSKRISAEEALNH 277

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 36  SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +N VKV DFG+ARA    G  V      + T  Y +PE   G        DV+S+GC+  
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
           E+ T +P F GDS +   ++  R    P      G+S
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 36  SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +N VKV DFG+ARA    G  V      + T  Y +PE   G        DV+S+GC+  
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
           E+ T +P F GDS +   ++  R    P      G+S
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 36  SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +N VKV DFG+ARA    G  V      + T  Y +PE   G        DV+S+GC+  
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
           E+ T +P F GDS +   ++  R    P      G+S
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 36  SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +N VKV DFG+ARA    G  V      + T  Y +PE   G        DV+S+GC+  
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
           E+ T +P F GDS +   ++  R    P      G+S
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 36  SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +N VKV DFG+ARA    G  V      + T  Y +PE   G        DV+S+GC+  
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 227
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
           E+ T +P F GDS +   ++  R    P      G+S
Sbjct: 228 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 264

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 36  SNIVKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +N VKV DFG+ARA    G  V      + T  Y +PE   G        DV+S+GC+  
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS 129
           E+ T +P F GDS     ++  R    P      G+S
Sbjct: 211 EVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLS 247

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL-LGSQRYSCPVD 83
           ++  +  I   S ++K++DFG ++              TL Y APE++  G + Y    D
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 207
Query: 84  VWSIGCIFAEIATRKPLF 101
           +WS+GC   E+AT KP F
Sbjct: 208 IWSLGCTIIEMATGKPPF 225

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL-LGSQRYSCPVD 83
           ++  +  I   S ++K++DFG ++              TL Y APE++  G + Y    D
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 193
Query: 84  VWSIGCIFAEIATRKPLF 101
           +WS+GC   E+AT KP F
Sbjct: 194 IWSLGCTIIEMATGKPPF 211

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 26/156 (16%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   VK+ADFGLA       + +     T  Y +PEVL     Y  PVD+W+ G I  
Sbjct: 139 KSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDMWACGVILY 197
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            +    P F  + +     R+++ +     D +P     P++ T  PE            
Sbjct: 198 ILLVGYPPFWDEDQ----HRLYQQIKAGAYD-FPS----PEWDTVTPE------------ 236
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
                 DL+ K L   PA RI A  ALKH +   ++
Sbjct: 237 ----AKDLINKMLTINPAKRITASEALKHPWICQRS 268

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 26/156 (16%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   VK+ADFGLA       + +     T  Y +PEVL     Y  PVD+W+ G I  
Sbjct: 139 KSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDMWACGVILY 197
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            +    P F  + +     R+++ +     D +P     P++ T  PE            
Sbjct: 198 ILLVGYPPFWDEDQ----HRLYQQIKAGAYD-FPS----PEWDTVTPE------------ 236
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
                 DL+ K L   PA RI A  ALKH +   ++
Sbjct: 237 ----AKDLINKMLTINPAKRITASEALKHPWICQRS 268

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 69/169 (40%), Gaps = 33/169 (19%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K  S  VK+ DFG+A   G    +    V T  + APEV+   + Y  PVDVW  G I  
Sbjct: 166 KENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILF 224
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +    F G  E     R+F            G+ K   YK    +WS+         
Sbjct: 225 ILLSGCLPFYGTKE-----RLFE-----------GIIK-GKYKMNPRQWSH--------- 258
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY------FADKTDLPKFAE 195
           + +   DL+ + L+  PA RI    AL H +      +A K  LP+  E
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE 307

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 30/182 (16%)
Query: 7   LEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWY 66
           L   Q+G     +     L A+    K K   VK+ADFGLA       + +     T  Y
Sbjct: 117 LHCHQMGVVHRDLKPENLLLAS----KCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGY 172
Query: 67  RAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
            +PEVL   + Y  PVD+W+ G I   +    P F  + +     ++++ +     D +P
Sbjct: 173 LSPEVLR-KEAYGKPVDIWACGVILYILLVGYPPFWDEDQ----HKLYQQIKAGAYD-FP 226
Query: 127 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                P++ T  PE  N                L+ + L   PA RI A  ALKH +   
Sbjct: 227 S----PEWDTVTPEAKN----------------LINQMLTINPAKRITAHEALKHPWVCQ 266
Query: 187 KT 188
           ++
Sbjct: 267 RS 268

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 30/182 (16%)
Query: 7   LEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWY 66
           L   Q+G     +     L A+    K K   VK+ADFGLA       + +     T  Y
Sbjct: 124 LHCHQMGVVHRNLKPENLLLAS----KLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY 179
Query: 67  RAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
            +PEVL     Y  PVD+W+ G I   +    P F  + +     R+++ +     D +P
Sbjct: 180 LSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----HRLYQQIKAGAYD-FP 233
Query: 127 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                P++ T  PE                  DL+ K L   P+ RI A  ALKH + + 
Sbjct: 234 S----PEWDTVTPE----------------AKDLINKMLTINPSKRITAAEALKHPWISH 273
Query: 187 KT 188
           ++
Sbjct: 274 RS 275

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 30/182 (16%)
Query: 7   LEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWY 66
           L   Q+G     +     L A+    K K   VK+ADFGLA       + +     T  Y
Sbjct: 135 LHCHQMGVVHRDLKPENLLLAS----KLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY 190
Query: 67  RAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
            +PEVL     Y  PVD+W+ G I   +    P F  + +     R+++ +     D +P
Sbjct: 191 LSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----HRLYQQIKAGAYD-FP 244
Query: 127 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                P++ T  PE                  DL+ K L   P+ RI A  ALKH + + 
Sbjct: 245 S----PEWDTVTPEAK----------------DLINKMLTINPSKRITAAEALKHPWISH 284
Query: 187 KT 188
           ++
Sbjct: 285 RS 286

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+AD G A  +      YT+ + T  YR+PEVLLG+  + C  D+WS  C+  E+ T  
Sbjct: 177 IKIADLGNACWYD---EHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGD 232
Query: 99  PLFQGDS 105
            LF+ D 
Sbjct: 233 FLFEPDE 239

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+AD G A  +      YT+ + T  YR+PEVLLG+  + C  D+WS  C+  E+ T  
Sbjct: 177 IKIADLGNACWYD---EHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGD 232
Query: 99  PLFQGDS 105
            LF+ D 
Sbjct: 233 FLFEPDE 239

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K   V++ DFG+AR     V +    + T +Y +PE+   ++ Y+   D+W++GC+  E+
Sbjct: 160 KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC-ENKPYNNKSDIWALGCVLYEL 218
Query: 95  ATRKPLFQGDSEIDQLFRIF 114
            T K  F+  S  + + +I 
Sbjct: 219 CTLKHAFEAGSMKNLVLKII 238

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 26/156 (16%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K   VK+ADFGLA       + +     T  Y +PEVL     Y  PVD+W+ G I  
Sbjct: 166 KCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDIWACGVILY 224
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            +    P F  + +     ++++ +     D +P     P++ T  PE  N         
Sbjct: 225 ILLVGYPPFWDEDQ----HKLYQQIKAGAYD-FPS----PEWDTVTPEAKN--------- 266
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
                  L+ + L   PA RI A+ ALKH +   ++
Sbjct: 267 -------LINQMLTINPAKRITADQALKHPWVCQRS 295

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 10  EQVGTYQVKITTRLFLQ---ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTL 64
           +Q+    V + ++ F+    AT  C+  ++ +VK+ DFG++R        R+  H ++ +
Sbjct: 135 QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 65  WYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKPLFQ-GDSEIDQLFRIFRVLTTP 120
            +  PE ++  ++++   DVWS+G +  EI T  ++P +Q  ++E+ +     RVL  P
Sbjct: 195 RWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP 252

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 30/150 (20%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ADFGLA    +P   +     T  Y +PE+   S  +    DVWS+GC+F  +   +
Sbjct: 151 IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA-HGLESDVWSLGCMFYTLLIGR 209
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P F  D+  + L ++                 L DY+   P +           L  +  
Sbjct: 210 PPFDTDTVKNTLNKVV----------------LADYE--MPSF-----------LSIEAK 240
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKT 188
           DL+ + L   PA R++  + L H + +  +
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 30/147 (20%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K   +K+ADFG+ +   +          T  Y APE+LLG Q+Y+  VD WS G +  E+
Sbjct: 154 KDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEM 212
Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
              +  F G  E ++LF   R+      DN             +P W           L+
Sbjct: 213 LIGQSPFHGQDE-EELFHSIRM------DN-----------PFYPRW-----------LE 243
Query: 155 QDGLDLLEKTLIYCPATRINAENALKH 181
           ++  DLL K  +  P  R+     ++ 
Sbjct: 244 KEAKDLLVKLFVREPEKRLGVRGDIRQ 270

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 11  QVGTYQVKITTRLFLQ---ATSFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLW 65
           Q+ +  V + ++ F+    AT  C+   + +VK+ DFG++R        R+  H ++ + 
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 66  YRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT--RKPLFQ-GDSEIDQLFRIFRVLTTP 120
           +  PE ++  ++++   DVWS G I  EI T  ++P FQ  ++E+ +     RVL  P
Sbjct: 201 WMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP 257

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 30/147 (20%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K   +K+ADFG+ +   +          T  Y APE+LLG Q+Y+  VD WS G +  E+
Sbjct: 153 KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEM 211
Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
              +  F G  E ++LF   R+      DN             +P W           L+
Sbjct: 212 LIGQSPFHGQDE-EELFHSIRM------DN-----------PFYPRW-----------LE 242
Query: 155 QDGLDLLEKTLIYCPATRINAENALKH 181
           ++  DLL K  +  P  R+     ++ 
Sbjct: 243 KEAKDLLVKLFVREPEKRLGVRGDIRQ 269

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K  S  VK+  FG+A   G    +    V T  + APEV+   + Y  PVDVW  G I  
Sbjct: 166 KENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILF 224
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +    F G  E     R+F            G+ K   YK    +WS+         
Sbjct: 225 ILLSGCLPFYGTKE-----RLFE-----------GIIK-GKYKMNPRQWSH--------- 258
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY------FADKTDLPKFAE 195
           + +   DL+ + L+  PA RI    AL H +      +A K  LP+  E
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE 307

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIA 95
           + +VK+ D GL R F          V T +Y +PE  +    Y+   D+WS+GC+  E+A
Sbjct: 172 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMA 230
Query: 96  TRKPLFQGD 104
             +  F GD
Sbjct: 231 ALQSPFYGD 239

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K  S  VK+  FG+A   G    +    V T  + APEV+   + Y  PVDVW  G I  
Sbjct: 168 KENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILF 226
Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +    F G  E     R+F            G+ K   YK    +WS+         
Sbjct: 227 ILLSGCLPFYGTKE-----RLFE-----------GIIK-GKYKMNPRQWSH--------- 260
Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKY------FADKTDLPKFAE 195
           + +   DL+ + L+  PA RI    AL H +      +A K  LP+  E
Sbjct: 261 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE 309

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK++DFG        V      V T ++ APEV+  S  Y+  VD+WS+G +  E+   +
Sbjct: 180 VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRS-LYATEVDIWSLGIMVIEMVDGE 238
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  DS +  + R+         D+ P   KL +     P   +F              
Sbjct: 239 PPYFSDSPVQAMKRL--------RDSPP--PKLKNSHKVSPVLRDF-------------- 274
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
             LE+ L+  P  R  A+  L H +   +T LP+
Sbjct: 275 --LERMLVRDPQERATAQELLDHPFLL-QTGLPE 305

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+AD G A       + +T ++ T  YR+ EVL+G+  YS P D+WS  C+  E+AT  
Sbjct: 227 VKIADLGNACWVH---KHFTEDIQTRQYRSIEVLIGAG-YSTPADIWSTACMAFELATGD 282
Query: 99  PLFQGDSEID 108
            LF+  S  D
Sbjct: 283 YLFEPHSGED 292

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+AD G A       + +T ++ T  YR+ EVL+GS  Y+ P D+WS  C+  E+AT  
Sbjct: 235 VKIADLGNACWVH---KHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGD 290
Query: 99  PLFQGDS 105
            LF+  S
Sbjct: 291 YLFEPHS 297

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+AD G A       + +T ++ T  YR+ EVL+GS  Y+ P D+WS  C+  E+AT  
Sbjct: 219 VKIADLGNACWVH---KHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGD 274
Query: 99  PLFQGDS 105
            LF+  S
Sbjct: 275 YLFEPHS 281

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15  YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
           + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      TL Y APE+L
Sbjct: 121 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 73  LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
              + ++ PVDVWS G +         +  G+   DQ             D+    S   
Sbjct: 179 KRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSDSXQEYSDWK 221
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + KT    W         K +D   L LL K L+  P+ RI   +  K +++
Sbjct: 222 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 27/157 (17%)
Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
            C+   +  +K+ DFGLAR +  P         T  + APEV+      S P D+WS+G 
Sbjct: 219 LCVNRDAKQIKIIDFGLARRYK-PREKLKVNFGTPEFLAPEVV-NYDFVSFPTDMWSVGV 276
Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
           I   + +    F GD++ + L  I                           W     D+ 
Sbjct: 277 IAYMLLSGLSPFLGDNDAETLNNILAC-----------------------RWD--LEDEE 311
Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
            +++ ++  + + K LI   + RI+A  ALKH + +D
Sbjct: 312 FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMXGT 169
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
           +
Sbjct: 264 Y 264

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15  YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
           + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      TL Y APE+L
Sbjct: 122 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 73  LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
              + ++ PVDVWS G +         +  G+   DQ             D+    S   
Sbjct: 180 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 222
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + KT    W         K +D   L LL K L+  P+ RI   +  K +++
Sbjct: 223 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 113 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 170
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 213
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 214 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
Query: 184 F 184
           +
Sbjct: 265 Y 265

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMXGT 169
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
           +
Sbjct: 264 Y 264

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
           +
Sbjct: 264 Y 264

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
           +
Sbjct: 264 Y 264

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 113 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 170
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 213
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 214 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
Query: 184 F 184
           +
Sbjct: 265 Y 265

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 113 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 170
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 213
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 214 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
Query: 184 F 184
           +
Sbjct: 265 Y 265

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
           +
Sbjct: 264 Y 264

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 42/206 (20%)
Query: 13  GTYQVKITTRLFLQATS---FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAP 69
           GT+  KI    F+Q+ +    C + K +I       +A   G P            +RAP
Sbjct: 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTP-----------GFRAP 215
Query: 70  EVLLGSQRYSCPVDVWSIGCIFAEI-ATRKPLFQGDSEIDQLFRIFRVLTT--------- 119
           EVL      +  +D+WS G IF  + + R P ++   ++  L +I  +  +         
Sbjct: 216 EVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKT 275
Query: 120 -----------PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD------QDGLDLLE 162
                      P +D      +L    ++ P+ ++  +  H  NL+       +  DLL+
Sbjct: 276 FGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSD-IQGHATNLEGWNEVPDEAYDLLD 334
Query: 163 KTLIYCPATRINAENALKHKYFADKT 188
           K L   PA+RI AE AL H +F D +
Sbjct: 335 KLLDLNPASRITAEEALLHPFFKDMS 360

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
           +
Sbjct: 264 Y 264

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15  YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
           + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      TL Y APE+L
Sbjct: 121 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 73  LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
              + ++ PVDVWS G +         +  G+   DQ             D+    S   
Sbjct: 179 KRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSDSCQEYSDWK 221
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + KT    W         K +D   L LL K L+  P+ RI   +  K +++
Sbjct: 222 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
           +
Sbjct: 264 Y 264

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
           +
Sbjct: 264 Y 264

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 112 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 169
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 212
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 213 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
Query: 184 F 184
           +
Sbjct: 264 Y 264

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 6   QLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVT 63
           QL    V  + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      T
Sbjct: 111 QLMAGVVYLHGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGT 168
Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
           L Y APE+L   + ++ PVDVWS G +         +  G+   DQ             D
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLT------AMLAGELPWDQ-----------PSD 211
Query: 124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
           +    S   + KT    W         K +D   L LL K L+  P+ RI   +  K ++
Sbjct: 212 SCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRW 262
Query: 184 F 184
           +
Sbjct: 263 Y 263

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15  YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
           + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      TL Y APE+L
Sbjct: 122 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 73  LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
              + ++ PVDVWS G +         +  G+   DQ             D+    S   
Sbjct: 180 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 222
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + KT    W         K +D   L LL K L+  P+ RI   +  K +++
Sbjct: 223 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15  YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
           + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      TL Y APE+L
Sbjct: 122 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 73  LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
              + ++ PVDVWS G +         +  G+   DQ             D+    S   
Sbjct: 180 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 222
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + KT    W         K +D   L LL K L+  P+ RI   +  K +++
Sbjct: 223 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15  YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
           + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      TL Y APE+L
Sbjct: 122 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 73  LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
              + ++ PVDVWS G +         +  G+   DQ             D+    S   
Sbjct: 180 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 222
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + KT    W         K +D   L LL K L+  P+ RI   +  K +++
Sbjct: 223 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 21/169 (12%)
Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           + KS  +K+ DFG A         +   + T  YRAPEV+L +  +    D+WS GC+ A
Sbjct: 195 RTKSTGIKLIDFGCAT---FKSDYHGSIINTRQYRAPEVIL-NLGWDVSSDMWSFGCVLA 250
Query: 93  EIATRKPLFQGDSEIDQLFRIFRV--------LTTPTEDNWPGVSKLPDYKTTFPE-WSN 143
           E+ T   LF+    ++ L  +  +        L   T+ N        + K  +PE  S+
Sbjct: 251 ELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASS 310
Query: 144 FCLDKHVKNL--------DQDGLDLLEKTLIYCPATRINAENALKHKYF 184
               KHVK           +   D L   L   P  R +    LKHK+ 
Sbjct: 311 INSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 33/148 (22%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL--LGSQRYSCPVDVWSIGCIFAEIAT 96
            K+ADFG+A      +      + T ++ APEV+  +G   Y+C  D+WS+G    E+A 
Sbjct: 164 AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG---YNCVADIWSLGITAIEMAE 220
Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS-NFCLDKHVKNLDQ 155
            KP +   ++I  +  IF + T P     P   + P+       WS NF           
Sbjct: 221 GKPPY---ADIHPMRAIFMIPTNP-----PPTFRKPEL------WSDNFT---------- 256
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKY 183
              D +++ L+  P  R  A   L+H +
Sbjct: 257 ---DFVKQCLVKSPEQRATATQLLQHPF 281

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15  YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
           + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      TL Y APE+L
Sbjct: 122 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 73  LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
              + ++ PVDVWS G +         +  G+   DQ             D+    S   
Sbjct: 180 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 222
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + KT    W         K +D   L LL K L+  P+ RI   +  K +++
Sbjct: 223 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
           ++K+ DFG ++  G    + T    T  Y APEVL+  G+  Y+  VD WS+G I     
Sbjct: 294 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 352
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
           +  P F   SE      +   +T+   +  P V            W+          + +
Sbjct: 353 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 388
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
             LDL++K L+  P  R   E AL+H +  D+    KF +
Sbjct: 389 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 428

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 15  YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVL 72
           + + IT R  ++  +  +  + N+ K++DFGLA  F      R+      TL Y APE+L
Sbjct: 121 HGIGITHR-DIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 73  LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
              + ++ PVDVWS G +         +  G+   DQ             D+    S   
Sbjct: 179 KRREFHAEPVDVWSCGIVLTA------MLAGELPWDQ-----------PSDSCQEYSDWK 221
Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           + KT    W         K +D   L LL K L+  P+ RI   +  K +++
Sbjct: 222 EKKTYLNPW---------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
           ++K+ DFG ++  G    + T    T  Y APEVL+  G+  Y+  VD WS+G I     
Sbjct: 280 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 338
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
           +  P F   SE      +   +T+   +  P V            W+          + +
Sbjct: 339 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 374
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
             LDL++K L+  P  R   E AL+H +  D+    KF +
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 414

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
           ++K+ DFG ++  G    + T    T  Y APEVL+  G+  Y+  VD WS+G I     
Sbjct: 154 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 212
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
           +  P F   SE      +   +T+   +  P V            W+          + +
Sbjct: 213 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 248
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
             LDL++K L+  P  R   E AL+H +  D+    KF +
Sbjct: 249 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 288

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
           ++K+ DFG ++  G    + T    T  Y APEVL+  G+  Y+  VD WS+G I     
Sbjct: 155 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
           +  P F   SE      +   +T+   +  P V            W+          + +
Sbjct: 214 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 249
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
             LDL++K L+  P  R   E AL+H +  D+    KF +
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 289

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
           ++K+ DFG ++  G    + T    T  Y APEVL+  G+  Y+  VD WS+G I     
Sbjct: 161 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 219
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
           +  P F   SE      +   +T+   +  P V            W+          + +
Sbjct: 220 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 255
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
             LDL++K L+  P  R   E AL+H +  D+    KF +
Sbjct: 256 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 295

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
           ++K+ DFG ++  G    + T    T  Y APEVL+  G+  Y+  VD WS+G I     
Sbjct: 155 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
           +  P F   SE      +   +T+   +  P V            W+          + +
Sbjct: 214 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 249
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
             LDL++K L+  P  R   E AL+H +  D+    KF +
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 289

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIA 95
           ++K+ DFG ++  G    + T    T  Y APEVL+  G+  Y+  VD WS+G I     
Sbjct: 155 LIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213
Query: 96  TRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
           +  P F   SE      +   +T+   +  P V            W+          + +
Sbjct: 214 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 249
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
             LDL++K L+  P  R   E AL+H +  D+    KF +
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 289

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEI 94
            +VK+ DFG A +   P   +   V T ++ APEV+L     +Y   VDVWS+G    E+
Sbjct: 191 GLVKLGDFGSA-SIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
Query: 95  ATRKPLFQGDSEIDQLFRI 113
           A RKP     + +  L+ I
Sbjct: 247 AERKPPLFNMNAMSALYHI 265

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG--SQRYSCPVDVWSIGCIFAEI 94
            +VK+ DFG A +   P   +   V T ++ APEV+L     +Y   VDVWS+G    E+
Sbjct: 152 GLVKLGDFGSA-SIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
Query: 95  ATRKPLFQGDSEIDQLFRI 113
           A RKP     + +  L+ I
Sbjct: 208 AERKPPLFNMNAMSALYHI 226

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 29/150 (19%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ADFG+A             V T ++ APEV+  S  Y    D+WS+G    E+A  +
Sbjct: 159 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGE 217
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P    +S++  +    RVL    ++N P +  + D+  +F E+ + CL+K          
Sbjct: 218 P---PNSDMHPM----RVLFLIPKNNPPTL--VGDFTKSFKEFIDACLNKD--------- 259
Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKT 188
                     P+ R  A+  LKHK+    +
Sbjct: 260 ----------PSFRPTAKELLKHKFIVKNS 279

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 29/157 (18%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI-FAEIATR 97
           +++ DFG A+       +      T  + APEVL   Q Y    D+WS+G + +  +A  
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 98  KPLFQGDSEIDQ--LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
            P   G S+  +  L RI     T +  NW  VS                         +
Sbjct: 223 TPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS-------------------------E 257
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
              DL+ K L   P  R+ A+  L+H +   K  LP+
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQ 294

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 29/157 (18%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI-FAEIATR 97
           +++ DFG A+       +      T  + APEVL   Q Y    D+WS+G + +  +A  
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 98  KPLFQGDSEIDQ--LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
            P   G S+  +  L RI     T +  NW  VS                         +
Sbjct: 223 TPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS-------------------------E 257
Query: 156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
              DL+ K L   P  R+ A+  L+H +   K  LP+
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQ 294

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFGLA               T  Y APEVL   + +S  VDVWSIGCI   +   K
Sbjct: 156 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 214
Query: 99  PLFQGDSEIDQLFRI 113
           P F+     +   RI
Sbjct: 215 PPFETSCLKETYLRI 229

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFGLA               T  Y APEVL   + +S  VDVWSIGCI   +   K
Sbjct: 156 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 214
Query: 99  PLFQGDSEIDQLFRI 113
           P F+     +   RI
Sbjct: 215 PPFETSCLKETYLRI 229

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFGLA               T  Y APEVL   + +S  VDVWSIGCI   +   K
Sbjct: 160 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 218
Query: 99  PLFQGDSEIDQLFRI 113
           P F+     +   RI
Sbjct: 219 PPFETSCLKETYLRI 233

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+  +  +  K N VK+ DFGLAR            V T +Y +PE +     Y+   D+
Sbjct: 142 LKPANVFLDGKQN-VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM-NRMSYNEKSDI 199
Query: 85  WSIGCIFAEIATRKPLFQGDSE 106
           WS+GC+  E+    P F   S+
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQ 221

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 18/123 (14%)
Query: 32  IKPKSNIV------KVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDV 84
           IKP++ ++      K+ DFG+A+A        T+ V+ T+ Y +PE   G     C  D+
Sbjct: 137 IKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC-TDI 195
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE-WSN 143
           +SIG +  E+   +P F G++ +        +     +D+ P V+   D +   P+  SN
Sbjct: 196 YSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQDSVPNVT--TDVRKDIPQSLSN 246
Query: 144 FCL 146
             L
Sbjct: 247 VIL 249

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+  +  +  K N VK+ DFGLAR            V T +Y +PE +     Y+   D+
Sbjct: 142 LKPANVFLDGKQN-VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM-NRMSYNEKSDI 199
Query: 85  WSIGCIFAEIATRKPLFQGDSE 106
           WS+GC+  E+    P F   S+
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQ 221

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+A +  +    NI K+ADFG +  F    ++ T    +  Y APE+  G +     VDV
Sbjct: 132 LKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 189
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+G I   + +    F G +  +   R+ R           G  ++P Y +T       
Sbjct: 190 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYMST------- 231
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                      D  +LL+K LI  P+ R   E  +K ++ 
Sbjct: 232 -----------DCENLLKKFLILNPSKRGTLEQIMKDRWM 260

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+A +  +    NI K+ADFG +  F    ++ T    +  Y APE+  G +     VDV
Sbjct: 139 LKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 196
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+G I   + +    F G +  +   R+ R           G  ++P Y +T       
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYMST------- 238
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                      D  +LL+K LI  P+ R   E  +K ++ 
Sbjct: 239 -----------DCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFGLA               T  Y APEVL   + +S  VDVWSIGCI   +   K
Sbjct: 178 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 236
Query: 99  PLFQGDSEIDQLFRI 113
           P F+     +   RI
Sbjct: 237 PPFETSCLKETYLRI 251

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+A +  +    NI K+ADFG +  F    ++ T    +  Y APE+  G +     VDV
Sbjct: 139 LKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 196
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+G I   + +    F G +  +   R+ R           G  ++P Y +T       
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYMST------- 238
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                      D  +LL+K LI  P+ R   E  +K ++ 
Sbjct: 239 -----------DCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+  +  +  K N VK+ DFGLAR            V T +Y +PE +     Y+   D+
Sbjct: 142 LKPANVFLDGKQN-VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM-NRMSYNEKSDI 199
Query: 85  WSIGCIFAEIATRKPLFQGDSE 106
           WS+GC+  E+    P F   S+
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQ 221

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+A +  +    NI K+ADFG +  F    ++ T    +  Y APE+  G +     VDV
Sbjct: 139 LKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 196
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+G I   + +    F G +  +   R+ R           G  ++P Y +T       
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPFYMST------- 238
Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                      D  +LL+K LI  P+ R   E  +K ++ 
Sbjct: 239 -----------DCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 194
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 195 AFGVLLWEIAT 205

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 197
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 198 AFGVLLWEIAT 208

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFGLA               T  Y APEVL   + +S  VDVWSIGCI   +   K
Sbjct: 180 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 238
Query: 99  PLFQGDSEIDQLFRI 113
           P F+     +   RI
Sbjct: 239 PPFETSCLKETYLRI 253

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 209
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 210 AFGVLLWEIAT 220

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 201
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 202 AFGVLLWEIAT 212

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 198
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 199 AFGVLLWEIAT 209

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFGLA               T  Y APEVL   + +S  VDVWSIGCI   +   K
Sbjct: 154 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGK 212
Query: 99  PLFQGDSEIDQLFRI 113
           P F+     +   RI
Sbjct: 213 PPFETSCLKETYLRI 227

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 194
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 195 AFGVLLWEIAT 205

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 198
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 199 AFGVLLWEIAT 209

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 197 AFGVLLWEIAT 207

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 201
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 202 AFGVLLWEIAT 212

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 201
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 202 AFGVLLWEIAT 212

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 194
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 195 AFGVLLWEIAT 205

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 201
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 202 AFGVLLWEIAT 212

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 200
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 201 AFGVLLWEIAT 211

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 197 AFGVLLWEIAT 207

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 197 AFGVLLWEIAT 207

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 197 AFGVLLWEIAT 207

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 197 AFGVLLWEIAT 207

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 196
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 197 AFGVLLWEIAT 207

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYS-CPVDVWSIG-CIFA 92
           K+  VK++DFG +  + V  +I      T  +  PE       Y+   VD+WS+G C++ 
Sbjct: 187 KNGRVKLSDFGESE-YMVDKKIKGSRG-TYEFMPPEFFSNESSYNGAKVDIWSLGICLYV 244
Query: 93  EIATRKPLFQGDSEIDQLFRIFRV--LTTPTEDN---WPGVSKLPDYKTTFPEWSNFCLD 147
                 P F     + +LF   R   +  P + N   +P    L + K+T       C +
Sbjct: 245 MFYNVVP-FSLKISLVELFNNIRTKNIEYPLDRNHFLYP----LTNKKST-------CSN 292
Query: 148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT--DLPKFAE 195
             + N D D L L    L   PA RI +E+ALKH++ AD    DL +F++
Sbjct: 293 NFLSNEDIDFLKLF---LRKNPAERITSEDALKHEWLADTNIEDLREFSK 339

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 201
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 202 AFGVLLWEIAT 212

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 34/171 (19%)
Query: 15  YQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG 74
           +Q +I  R  L+A +  +    NI K+ADFG +  F V  ++ T    +  Y APE+  G
Sbjct: 128 HQKRIVHR-DLKAENLLLDADMNI-KIADFGFSNEFTVGGKLDTF-CGSPPYAAPELFQG 184
Query: 75  SQRYSCP-VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 133
            ++Y  P VDVWS+G I   + +    F G +  +   R+ R           G  ++P 
Sbjct: 185 -KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYRIPF 232
Query: 134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           Y +T                  D  +LL++ L+  P  R   E  +K ++ 
Sbjct: 233 YMST------------------DCENLLKRFLVLNPIKRGTLEQIMKDRWI 265

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK++DFG        V      V T ++ APE L+    Y   VD+WS+G +  E+   +
Sbjct: 166 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 224
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  +  +  +  I         DN P   +L +     P    F              
Sbjct: 225 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 260
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
             L++ L+  PA R  A   LKH + A
Sbjct: 261 --LDRLLVRDPAQRATAAELLKHPFLA 285

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK++DFG        V      V T ++ APE L+    Y   VD+WS+G +  E+   +
Sbjct: 164 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 222
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  +  +  +  I         DN P   +L +     P    F              
Sbjct: 223 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 258
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
             L++ L+  PA R  A   LKH + A
Sbjct: 259 --LDRLLVRDPAQRATAAELLKHPFLA 283

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 403
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 404 AFGVLLWEIAT 414

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27  ATSFCIKPKSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           A   C+  ++++VKVADFGL+R   G     +      + + APE  L   ++S   DVW
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNKFSIKSDVW 442
Query: 86  SIGCIFAEIAT 96
           + G +  EIAT
Sbjct: 443 AFGVLLWEIAT 453

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK++DFG        V      V T ++ APE L+    Y   VD+WS+G +  E+   +
Sbjct: 155 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 213
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  +  +  +  I         DN P   +L +     P    F              
Sbjct: 214 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 249
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
             L++ L+  PA R  A   LKH + A
Sbjct: 250 --LDRLLVRDPAQRATAAELLKHPFLA 274

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK++DFG        V      V T ++ APE L+    Y   VD+WS+G +  E+   +
Sbjct: 209 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 267
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  +  +  +  I         DN P   +L +     P    F              
Sbjct: 268 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 303
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
             L++ L+  PA R  A   LKH + A
Sbjct: 304 --LDRLLVRDPAQRATAAELLKHPFLA 328

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK++DFG        V      V T ++ APE L+    Y   VD+WS+G +  E+   +
Sbjct: 159 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 217
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  +  +  +  I         DN P   +L +     P    F              
Sbjct: 218 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 253
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
             L++ L+  PA R  A   LKH + A
Sbjct: 254 --LDRLLVRDPAQRATAAELLKHPFLA 278

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK++DFG        V      V T ++ APE L+    Y   VD+WS+G +  E+   +
Sbjct: 286 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGE 344
Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  +  +  +  I         DN P   +L +     P    F              
Sbjct: 345 PPYFNEPPLKAMKMI--------RDNLP--PRLKNLHKVSPSLKGF-------------- 380
Query: 159 DLLEKTLIYCPATRINAENALKHKYFA 185
             L++ L+  PA R  A   LKH + A
Sbjct: 381 --LDRLLVRDPAQRATAAELLKHPFLA 405

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFGLA               T  Y APEVL   + +S  VD+WS+GCI   +   K
Sbjct: 165 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGK 223
Query: 99  PLFQ 102
           P F+
Sbjct: 224 PPFE 227

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 29/147 (19%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +K+ DFG++R  G    +   E++ T  Y APE+L      +   D+W+IG I   + T 
Sbjct: 173 IKIVDFGMSRKIGHACEL--REIMGTPEYLAPEIL-NYDPITTATDMWNIGIIAYMLLTH 229
Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
              F G+   +    I +V    +E+ +  VS+L                          
Sbjct: 230 TSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL-------------------------A 264
Query: 158 LDLLEKTLIYCPATRINAENALKHKYF 184
            D ++  L+  P  R  AE  L H + 
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWL 291

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 27  ATSFCIKPKSNIVKVADFGLAR--AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           A   C+  + N++K++DFG++R  A GV         V + + APE L    RYS   DV
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL-NYGRYSSESDV 298
Query: 85  WSIGCIFAE 93
           WS G +  E
Sbjct: 299 WSFGILLWE 307

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+A +  +    NI K+ADFG +  F V  ++ T    +  Y APE+  G +     VDV
Sbjct: 140 LKAENLLLDGDMNI-KIADFGFSNEFTVGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 197
Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFR 115
           WS+G I   + +    F G +  +   R+ R
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKELRERVLR 228

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVV------TLWYRAPEVLLGSQRYSCPVDVWSIGCI-F 91
           +K+ADFGL++       I  H+V+      T  Y APE+L G   Y   VD+WS+G I +
Sbjct: 190 LKIADFGLSK-------IVEHQVLMKTVCGTPGYCAPEILRGCA-YGPEVDMWSVGIITY 241
Query: 92  AEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
             +   +P +  D   DQ F   R+L               +Y    P W    L+    
Sbjct: 242 ILLCGFEPFY--DERGDQ-FMFRRILNC-------------EYYFISPWWDEVSLNAK-- 283
Query: 152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
                  DL+ K ++  P  R+    AL+H +   K 
Sbjct: 284 -------DLVRKLIVLDPKKRLTTFQALQHPWVTGKA 313

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFGLA               T  Y APEVL   + +S  VD+WS+GCI   +   K
Sbjct: 181 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGK 239
Query: 99  PLFQGDSEIDQLFRI 113
           P F+     +   RI
Sbjct: 240 PPFETSCLKETYIRI 254

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFGLA               T  Y APEVL   + +S  VD+WS+GCI   +   K
Sbjct: 181 VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGK 239
Query: 99  PLFQGDSEIDQLFRI 113
           P F+     +   RI
Sbjct: 240 PPFETSCLKETYIRI 254

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 32/138 (23%)
Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           VK+ DFGL +   +     TH    T+ Y APE+L+ S  ++  VD WS+G +  ++ T 
Sbjct: 160 VKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAPEILMRSG-HNRAVDWWSLGALMYDMLTG 217
Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
            P F G++    + +I +               LP Y                  L Q+ 
Sbjct: 218 APPFTGENRKKTIDKILKCKLN-----------LPPY------------------LTQEA 248
Query: 158 LDLLEKTLIYCPATRINA 175
            DLL+K L    A+R+ A
Sbjct: 249 RDLLKKLLKRNAASRLGA 266

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	197
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-103
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-102
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-101
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-100
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-100
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-99
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-99
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-95
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-95
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-90
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	6e-87
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	6e-75
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-69
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	9e-69
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-68
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-62
3rp9_A	458	Mitogen-activated protein kinase; structural genom	6e-57
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-52
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-51
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-50
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-50
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-50
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-50
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-50
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-49
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-49
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-48
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	7e-43
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-31
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-30
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-30
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	5e-30
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	7e-29
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-27
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-22
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	9e-22
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-21
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	7e-21
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	9e-20
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-19
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-18
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-18
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-18
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	9e-18
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-17
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-17
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-17
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	9e-17
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-16
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-16
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-16
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-16
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-16
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	9e-16
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-15
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-15
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-15
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-15
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-15
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-15
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-15
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-15
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	7e-15
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-15
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-14
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-14
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-14
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-14
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-14
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-14
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-14
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-14
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-14
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-14
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-14
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-14
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-14
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-14
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-14
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-14
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-14
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-14
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	8e-14
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	8e-14
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-13
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-13
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-13
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-13
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-13
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-13
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-13
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-12
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-12
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-12
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-11
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-11
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-11
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-11
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-11
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-11
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-11
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-11
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	8e-11
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	9e-11
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-10
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-10
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-10
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-10
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-10
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-10
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-10
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	6e-10
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	6e-10
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	8e-10
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	8e-10
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-10
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-09
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-09
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-09
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-09
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-09
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	4e-09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-09
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-09
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	6e-09
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-08
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-08
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-08
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-08
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-08
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-08
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-08
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-08
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-08
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	8e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	9e-08
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-07
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-07
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-07
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	5e-07
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-07
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	8e-07
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-06
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-06
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-06
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-06
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-06
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-06
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-06
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-06
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-06
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-06
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	6e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-06
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	8e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	8e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	9e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	9e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-05
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-05
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	7e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	9e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	6e-04

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  296 bits (761), Expect = e-103
 Identities = 89/187 (47%), Positives = 116/187 (62%), Gaps = 17/187 (9%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNI-------VKVADFGLARAFGVPVRIYTH 59
             K      L   ++C         +KP  N+       +K+ADFGLARAFG+PVR YTH
Sbjct: 101 TAKSFLLQLLNGIAYCHDRRVLHRDLKP-QNLLINREGELKIADFGLARAFGIPVRKYTH 159

Query: 60  EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 119
           E+VTLWYRAP+VL+GS++YS  +D+WS+GCIFAE+    PLF G SE DQL RIFR+L T
Sbjct: 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT 219

Query: 120 PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 179
           P   NWP V++LP Y   F  +     +  +K LD+ G+DLL K L   P  RI A+ AL
Sbjct: 220 PNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

Query: 180 KHKYFAD 186
           +H YF +
Sbjct: 280 EHAYFKE 286

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  292 bits (751), Expect = e-101
 Identities = 83/201 (41%), Positives = 116/201 (57%), Gaps = 22/201 (10%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNI-------VKVADFGLARAFGVPVRIYTH 59
            VK+     L+  ++C         +KP  N+       +K+ADFGLARA  +P + Y +
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKP-QNLLINERGELKLADFGLARAKSIPTKTYDN 159

Query: 60  EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 119
           EVVTLWYR P++LLGS  YS  +D+W +GCIF E+AT +PLF G +  +QL  IFR+L T
Sbjct: 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGT 219

Query: 120 PTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
           PTE+ WPG+    ++KT  +P++    L  H   LD DG DLL K L +    RI+AE+A
Sbjct: 220 PTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDA 279

Query: 179 LKHKYFAD----KTDLPKFAE 195
           +KH +F         LP    
Sbjct: 280 MKHPFFLSLGERIHKLPDTTS 300

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  293 bits (753), Expect = e-100
 Identities = 80/200 (40%), Positives = 109/200 (54%), Gaps = 22/200 (11%)

Query: 16  QVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHE 60
            +K    + LQ   +          +KP      ++ ++K+ADFGLA++FG P R YTH+
Sbjct: 113 HIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ 172

Query: 61  VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           VVT WYRAPE+L G++ Y   VD+W++GCI AE+  R P   GDS++DQL RIF  L TP
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP 232

Query: 121 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 180
           TE+ WP +  LPDY  TF  +    L         D LDL++   ++ P  RI A  ALK
Sbjct: 233 TEEQWPDMCSLPDYV-TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291

Query: 181 HKYF------ADKTDLPKFA 194
            KYF           LP+  
Sbjct: 292 MKYFSNRPGPTPGCQLPRPN 311

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  292 bits (749), Expect = e-100
 Identities = 90/194 (46%), Positives = 118/194 (60%), Gaps = 21/194 (10%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNI-------VKVADFGLARAFGVPVRIYTH 59
           Q+KI     L+  + C         +KP  N+       +K+ADFGLARAFG+PVR YTH
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKP-QNLLINSDGALKLADFGLARAFGIPVRSYTH 178

Query: 60  EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 119
           EVVTLWYRAP+VL+GS++YS  VD+WSIGCIFAE+ T KPLF G ++ DQL +IF +L T
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGT 238

Query: 120 PTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
           P    WP V +LP +K  TF  +        +    Q+G+DLL   L + P  RI+A +A
Sbjct: 239 PNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA 298

Query: 179 LKHKYFADKTDLPK 192
           + H YF    DL  
Sbjct: 299 MNHPYF---KDLDP 309

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  289 bits (741), Expect = 3e-99
 Identities = 79/191 (41%), Positives = 109/191 (57%), Gaps = 20/191 (10%)

Query: 16  QVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHE 60
            VK      LQ  +FC         +KP      K   +K+ DFGLARAFG+PV  ++ E
Sbjct: 109 LVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE 168

Query: 61  VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           VVTLWYRAP+VL+GS+ YS  +D+WS GCI AE+ T KPLF G ++ +QL  IF ++ TP
Sbjct: 169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTP 228

Query: 121 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN-----LDQDGLDLLEKTLIYCPATRINA 175
            E  WP V+KLP Y     +     L + ++      LD + +D L   L   P  R++A
Sbjct: 229 NESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA 288

Query: 176 ENALKHKYFAD 186
           + AL H +FA+
Sbjct: 289 KQALHHPWFAE 299

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  289 bits (742), Expect = 3e-99
 Identities = 90/198 (45%), Positives = 122/198 (61%), Gaps = 24/198 (12%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNI------------VKVADFGLARAFGVPV 54
            +K      +   +FC         +KP  N+            +K+ DFGLARAFG+P+
Sbjct: 133 VIKSFLYQLINGVNFCHSRRCLHRDLKP-QNLLLSVSDASETPVLKIGDFGLARAFGIPI 191

Query: 55  RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIF 114
           R +THE++TLWYR PE+LLGS+ YS  VD+WSI CI+AE+  + PLF GDSEIDQLF+IF
Sbjct: 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF 251

Query: 115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN-LDQDGLDLLEKTLIYCPATRI 173
            VL  P +  WPGV+ LPD+K +FP++    L + +   LD +GLDLL   L   P  RI
Sbjct: 252 EVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRI 311

Query: 174 NAENALKHKYFADKTDLP 191
           +A+NAL+H YF+   D  
Sbjct: 312 SAKNALEHPYFSHN-DFD 328

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  282 bits (725), Expect = 4e-97
 Identities = 90/189 (47%), Positives = 118/189 (62%), Gaps = 20/189 (10%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNI-------VKVADFGLARAFGVPVRIYTH 59
            VK      L+   FC         +KP  N+       +K+A+FGLARAFG+PVR Y+ 
Sbjct: 102 IVKSFLFQLLKGLGFCHSRNVLHRDLKP-QNLLINRNGELKLANFGLARAFGIPVRCYSA 160

Query: 60  EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLT 118
           EVVTLWYR P+VL G++ YS  +D+WS GCIFAE+A   +PLF G+   DQL RIFR+L 
Sbjct: 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 220

Query: 119 TPTEDNWPGVSKLPDYKTTFPEW-SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAEN 177
           TPTE+ WP ++KLPDYK  +P + +   L   V  L+  G DLL+  L   P  RI+AE 
Sbjct: 221 TPTEEQWPSMTKLPDYK-PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE 279

Query: 178 ALKHKYFAD 186
           AL+H YF+D
Sbjct: 280 ALQHPYFSD 288

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  282 bits (725), Expect = 5e-97
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 17/199 (8%)

Query: 16  QVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHE 60
            VK  T   LQA +FC         +KP      K +++K+ DFG AR    P   Y  E
Sbjct: 103 LVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE 162

Query: 61  VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           V T WYR+PE+L+G  +Y  PVDVW+IGC+FAE+ +  PL+ G S++DQL+ I + L   
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222

Query: 121 TEDNWPGVSKLPDYK-TTFPEWSNFC-LDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
              +    S    +     P+  +   L+    N+    L LL+  L   P  R+  E  
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL 282

Query: 179 LKHKYFADKTDLPKFAEYY 197
           L H YF +  ++   A+ +
Sbjct: 283 LHHPYFENIREIEDLAKEH 301

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  282 bits (723), Expect = 2e-96
 Identities = 63/186 (33%), Positives = 87/186 (46%), Gaps = 17/186 (9%)

Query: 16  QVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHE 60
            V+      +    FC         IKP      +S +VK+ DFG AR    P  +Y  E
Sbjct: 125 VVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE 184

Query: 61  VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           V T WYRAPE+L+G  +Y   VDVW+IGC+  E+   +PLF GDS+IDQL+ I   L   
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNL 244

Query: 121 TEDNWPGVSKLPDYK-TTFPEWS-NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
              +    +K P +     PE      L++    L +  +DL +K L   P  R      
Sbjct: 245 IPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304

Query: 179 LKHKYF 184
           L H +F
Sbjct: 305 LHHDFF 310

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  278 bits (713), Expect = 3e-95
 Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 21/193 (10%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNI-------VKVADFGLARAFGVPVRIYTH 59
            +K   R FL+   F          +KP  NI       VK+ADFGLAR +   +   T 
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKP-ENILVTSGGTVKLADFGLARIYSYQMA-LTP 178

Query: 60  EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 119
            VVTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+  RKPLF G+SE DQL +IF ++  
Sbjct: 179 VVVTLWYRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237

Query: 120 PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 179
           P ED+WP    LP     FP      +   V  +++ G  LL + L + P  RI+A  AL
Sbjct: 238 PPEDDWPRDVSLPRG--AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295

Query: 180 KHKYFADKTDLPK 192
           +H Y       P+
Sbjct: 296 QHSYLHKDEGNPE 308

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  279 bits (715), Expect = 4e-95
 Identities = 83/193 (43%), Positives = 110/193 (56%), Gaps = 22/193 (11%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNI-------VKVADFGLARAFGVPVRIYTH 59
            +K      L+   F          +KP  NI       +K+ADFGLAR +   +   T 
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKP-QNILVTSSGQIKLADFGLARIYSFQMA-LTS 178

Query: 60  EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTT 119
            VVTLWYRAPEVLL S  Y+ PVD+WS+GCIFAE+  RKPLF+G S++DQL +I  V+  
Sbjct: 179 VVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237

Query: 120 PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 179
           P E++WP    LP     F   S   ++K V ++D+ G DLL K L + PA RI+A +AL
Sbjct: 238 PGEEDWPRDVALPRQ--AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295

Query: 180 KHKYFADKTDLPK 192
            H YF D  +  K
Sbjct: 296 SHPYFQDL-ERCK 307

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  267 bits (685), Expect = 2e-90
 Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 30/207 (14%)

Query: 16  QVKITTRLFLQATSFC---------IKPKSNI-------VKVADFGLARAFGVPVRI--- 56
           ++K   ++ L    +          +K  +N+       +K+ADFGLARAF +       
Sbjct: 125 EIKRVMQMLLNGLYYIHRNKILHRDMKA-ANVLITRDGVLKLADFGLARAFSLAKNSQPN 183

Query: 57  -YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFR 115
            YT+ VVTLWYR PE+LLG + Y  P+D+W  GCI AE+ TR P+ QG++E  QL  I +
Sbjct: 184 RYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 243

Query: 116 VLTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNL--DQDGLDLLEKTLIYCPATR 172
           +  + T + WP V     Y+     +     +   +K    D   LDL++K L+  PA R
Sbjct: 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 303

Query: 173 INAENALKHKYF------ADKTDLPKF 193
           I++++AL H +F      +D   +   
Sbjct: 304 IDSDDALNHDFFWSDPMPSDLKGMLST 330

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  260 bits (667), Expect = 6e-87
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 43/219 (19%)

Query: 15  YQVKITTRLFLQATSFC---------IKPKSNI-----------VKVADFGLARAFGVPV 54
             VK      L    +          +KP +NI           VK+AD G AR F  P+
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKP-ANILVMGEGPERGRVKIADMGFARLFNSPL 186

Query: 55  RIYTH---EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI---- 107
           +        VVT WYRAPE+LLG++ Y+  +D+W+IGCIFAE+ T +P+F    E     
Sbjct: 187 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 246

Query: 108 -----DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS---------NFCLDKHVKNL 153
                DQL RIF V+  P + +W  + K+P++ T   ++             ++KH    
Sbjct: 247 NPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKP 306

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
           D     LL+K L   P  RI +E A++  YF +   LP 
Sbjct: 307 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED-PLPT 344

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  229 bits (586), Expect = 6e-75
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 5/158 (3%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
            + P S ++K+ DFG A+   +        + + +YRAPE++ G+  Y+  +D+WS GC+
Sbjct: 173 LLDPPSGVLKLIDFGSAKIL-IAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCV 231

Query: 91  FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLDKH 149
            AE+   +PLF G+S IDQL  I +VL TP+ +    ++  P+Y +  FP+       K 
Sbjct: 232 MAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN--PNYMEHKFPQIRPHPFSKV 289

Query: 150 V-KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                  D +DL+ + L Y P+ R+ A  AL H +F +
Sbjct: 290 FRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  216 bits (551), Expect = 3e-69
 Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 5/158 (3%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
            + P + ++K+ DFG A+   V        + + +YRAPE++ G+  Y+  +DVWS GC+
Sbjct: 188 LLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 246

Query: 91  FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK-TTFPEWSNFCLDKH 149
            AE+   +P+F GDS +DQL  I +VL TPT +    ++  P+Y    FP+       K 
Sbjct: 247 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQIKAHPWTKV 304

Query: 150 V-KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                  + + L  + L Y P  R+    A  H +F +
Sbjct: 305 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 342

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  212 bits (543), Expect = 9e-69
 Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 15/167 (8%)

Query: 32  IKPKSNI--------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
           IKP  N+        +K+ DFG A+    P       + + +YRAPE++ G+Q Y+  VD
Sbjct: 157 IKP-HNVLVNEADGTLKLCDFGSAKKL-SPSEPNVAYICSRYYRAPELIFGNQHYTTAVD 214

Query: 84  VWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNW----PGVSKLPDYKTTFP 139
           +WS+GCIFAE+   +P+F+GD+   QL  I RVL  P+ +      P  + +  Y +   
Sbjct: 215 IWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGI 274

Query: 140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
            WSN     H     ++  DLL   L Y P  R+    AL H YF +
Sbjct: 275 PWSNV-FSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  211 bits (539), Expect = 1e-68
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 28/188 (14%)

Query: 25  LQATSFC---------IKPKSNI--------VKVADFGLARAFGVPVRIYTHEVVTLWYR 67
           L+A  +C         +KP  N+        +++ D+GLA  F  P + Y   V + +++
Sbjct: 140 LKALDYCHSMGIMHRDVKP-HNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFK 197

Query: 68  APEVLLGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
            PE+L+  Q Y   +D+WS+GC+ A +  RK P F G    DQL RI +VL T    ++ 
Sbjct: 198 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257

Query: 127 GVSKL---PDYKTTFP-----EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
               +   P +           W  F   ++   +  + LD L+K L Y   +R+ A  A
Sbjct: 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317

Query: 179 LKHKYFAD 186
           ++H YF  
Sbjct: 318 MEHPYFYT 325

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  197 bits (503), Expect = 2e-62
 Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 32  IKPKSNI--------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
           IKP  N+        +K+ DFG A+   +P       + + +YRAPE++LG+  Y+  +D
Sbjct: 167 IKP-QNLLVNSKDNTLKLCDFGSAKKL-IPSEPSVAYICSRFYRAPELMLGATEYTPSID 224

Query: 84  VWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWS 142
           +WSIGC+F E+   KPLF G++ IDQL RI +++ TPT++    ++  P Y +  FP   
Sbjct: 225 LWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN--PHYTEVRFPTLK 282

Query: 143 NFCLDKHVKN-LDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                K +        +DLLE+ L Y P  RIN   A+ H +F  
Sbjct: 283 AKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  185 bits (470), Expect = 6e-57
 Identities = 67/222 (30%), Positives = 89/222 (40%), Gaps = 68/222 (30%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVP---------------------------VRIY 57
           +KP +N        VKV DFGLAR    P                            R  
Sbjct: 182 LKP-ANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQL 240

Query: 58  THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI-----------ATRKPLFQGDS- 105
           T  VVT WYRAPE++L  + Y+  +DVWSIGCIFAE+           A R PLF G S 
Sbjct: 241 TGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSC 300

Query: 106 -------------------EIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNF 144
                                DQL  IF +L TP+E++   +       Y   FP+    
Sbjct: 301 FPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGT 360

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
            L +       D + LL++ L++ P  RI     L H +F +
Sbjct: 361 DLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  170 bits (433), Expect = 1e-52
 Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 16/175 (9%)

Query: 32  IKPKSNI--------VKVADFGLARAFGVPV---RIYTHEVVTLWYRAPEVLLGSQRYSC 80
           +KP +N+        +K+ DFGLAR            +  +VT WYR+P +LL    Y+ 
Sbjct: 146 LKP-ANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTK 204

Query: 81  PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV-SKLPDYKTTFP 139
            +D+W+ GCIFAE+ T K LF G  E++Q+  I   +    E++   + S +P Y     
Sbjct: 205 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDM 264

Query: 140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLP 191
              +  L + +  + ++ +D LE+ L + P  R+ AE AL H Y +      D P
Sbjct: 265 TEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEP 319

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  168 bits (428), Expect = 1e-51
 Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 15/173 (8%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           + P  NI       + + DF LAR         TH V   WYRAPE+++  + ++  VD+
Sbjct: 160 LHP-GNILLADNNDITICDFNLAREDTADANK-THYVTHRWYRAPELVMQFKGFTKLVDM 217

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDY-KTTFPEW 141
           WS GC+ AE+  RK LF+G +  +QL +I  V+ TP  ++    S     DY + +    
Sbjct: 218 WSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNV 277

Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLP 191
                   V   D   LDL+ K L + P  RI+ E AL+H YF    D  DL 
Sbjct: 278 PARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLT 330

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  166 bits (422), Expect = 1e-50
 Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 16/181 (8%)

Query: 32  IKPKSNI-------VKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP 81
           +KP SN+       +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  
Sbjct: 154 LKP-SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 212

Query: 82  VDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFP 139
           +D+WS+GCI AE+ + +P+F G   +DQL  I  +L +P++++   +   K  +Y  + P
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 272

Query: 140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
             +    ++   N D   LDLL+K L + P  RI  E AL H Y     D +D P     
Sbjct: 273 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332

Query: 197 Y 197
           +
Sbjct: 333 F 333

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  166 bits (422), Expect = 1e-50
 Identities = 64/172 (37%), Positives = 86/172 (50%), Gaps = 16/172 (9%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP  N+       +K+ DFGLAR     +   T  VVT WYRAPEV+L   RY+  VD+
Sbjct: 154 LKP-GNLAVNEDCELKILDFGLARQADSEM---TGYVVTRWYRAPEVILNWMRYTQTVDI 209

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWS 142
           WS+GCI AE+ T K LF+G   +DQL  I +V  TP  +    +   +  +Y    PE  
Sbjct: 210 WSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE 269

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLP 191
                  + N     ++LLEK L+     R+ A  AL H YF    D  D P
Sbjct: 270 KKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEP 321

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  165 bits (420), Expect = 2e-50
 Identities = 58/178 (32%), Positives = 84/178 (47%), Gaps = 16/178 (8%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP  N+       +K+ DFGLAR     +   T  VVT WYRAPEV+L    Y+  VD+
Sbjct: 152 LKP-GNLAVNEDCELKILDFGLARHADAEM---TGYVVTRWYRAPEVILSWMHYNQTVDI 207

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWS 142
           WS+GCI AE+ T K LF+G   +DQL +I +V   P  +    ++      Y  + P+  
Sbjct: 208 WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP 267

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEYY 197
                +          DLLEK L      R+ A  AL H +F    D  +  +  + +
Sbjct: 268 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPF 325

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  166 bits (421), Expect = 2e-50
 Identities = 61/183 (33%), Positives = 83/183 (45%), Gaps = 26/183 (14%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNI       +K+ DFGLAR  G    + T  VVT +YRAPEV+LG   Y   VD+
Sbjct: 153 LKP-SNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGM-GYKENVDI 209

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--------KLPDYK- 135
           WS+GCI  E+     LF G   IDQ  ++   L TP  +    +           P Y  
Sbjct: 210 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG 269

Query: 136 ----TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKT 188
                 FP+       +H K       DLL K L+   + RI+ + AL+H Y     D +
Sbjct: 270 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS 329

Query: 189 DLP 191
           +  
Sbjct: 330 EAE 332

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  167 bits (425), Expect = 3e-50
 Identities = 62/187 (33%), Positives = 85/187 (45%), Gaps = 26/187 (13%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNI       +K+ DFGLAR  G    + T  VVT +YRAPEV+L    Y   VD+
Sbjct: 190 LKP-SNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL-GMGYKENVDI 246

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--------KLP---- 132
           WS+GCI  E+   K LF G   IDQ  ++   L TP  +    +           P    
Sbjct: 247 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 306

Query: 133 -DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKT 188
             +   FP+       +H K       DLL K L+  PA RI+ ++AL+H Y     D  
Sbjct: 307 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA 366

Query: 189 DLPKFAE 195
           ++     
Sbjct: 367 EVEAPPP 373

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  164 bits (416), Expect = 1e-49
 Identities = 60/164 (36%), Positives = 82/164 (50%), Gaps = 13/164 (7%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SN+       +K+ DFGLAR     +   T  V T WYRAPE++L    Y+  VD+
Sbjct: 158 LKP-SNLAVNEDCELKILDFGLARHTADEM---TGYVATRWYRAPEIMLNWMHYNQTVDI 213

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWS 142
           WS+GCI AE+ T + LF G   IDQL  I R++ TP  +    +S     +Y  +  +  
Sbjct: 214 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 273

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                      +   +DLLEK L+     RI A  AL H YFA 
Sbjct: 274 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  162 bits (413), Expect = 2e-49
 Identities = 68/183 (37%), Positives = 93/183 (50%), Gaps = 24/183 (13%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIY----------THEVVTLWYRAPEVLLG 74
           +KP SN+       +KV DFGLAR                      V T WYRAPEV+L 
Sbjct: 138 LKP-SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT 196

Query: 75  SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP-- 132
           S +YS  +DVWS GCI AE+  R+P+F G     QL  IF ++ TP  DN     + P  
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256

Query: 133 -DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKT 188
            +Y  + P +    L+K    ++  G+DLL++ L++ PA RI A+ AL+H Y     D  
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316

Query: 189 DLP 191
           D P
Sbjct: 317 DEP 319

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  161 bits (409), Expect = 1e-48
 Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 50/209 (23%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIY---------------------THEVVT 63
           +KP SNI       VKVADFGL+R+F    R+                      T  V T
Sbjct: 135 MKP-SNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVAT 193

Query: 64  LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED 123
            WYRAPE+LLGS +Y+  +D+WS+GCI  EI   KP+F G S ++QL RI  V+  P+ +
Sbjct: 194 RWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNE 253

Query: 124 ------------------NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTL 165
                                 + +           +         + +++ LDLL+K L
Sbjct: 254 DVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313

Query: 166 IYCPATRINAENALKHKYFA---DKTDLP 191
            + P  RI+A +ALKH + +   +  + P
Sbjct: 314 QFNPNKRISANDALKHPFVSIFHNPNEEP 342

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  147 bits (373), Expect = 7e-43
 Identities = 67/214 (31%), Positives = 90/214 (42%), Gaps = 60/214 (28%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIY----------------------THEVV 62
           +KP +N        VKV DFGLAR                               T  VV
Sbjct: 155 LKP-ANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV 213

Query: 63  TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI-----------ATRKPLFQGDSE----- 106
           T WYRAPE++L  + Y+  +D+WS GCIFAE+             R PLF G S      
Sbjct: 214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSP 273

Query: 107 ------------IDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCLDKHVKN 152
                        DQL  IF ++ TPTED+   ++  ++  Y   FP      L +   +
Sbjct: 274 DRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPS 333

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
           +  DG++LLE  L + P  RI  + AL H Y  D
Sbjct: 334 ISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  116 bits (293), Expect = 3e-31
 Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 34/188 (18%)

Query: 34  PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
              + +KV DFG +      V  Y   + + +YRAPEV+LG+ RY  P+D+WS+GCI AE
Sbjct: 236 QGRSGIKVIDFGSSCYEHQRVYTY---IQSRFYRAPEVILGA-RYGMPIDMWSLGCILAE 291

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTED------------------NWPGVSKLPDYK 135
           + T  PL  G+ E DQL  +  +L  P++                    +  V+ L D  
Sbjct: 292 LLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGS 351

Query: 136 TTFPE----WSNFCLDKHVKNLDQDG--------LDLLEKTLIYCPATRINAENALKHKY 183
                              +              LD L++ L + PA R+    AL+H +
Sbjct: 352 VVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPW 411

Query: 184 FADKTDLP 191
              +   P
Sbjct: 412 LRRRLPKP 419

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  113 bits (285), Expect = 2e-30
 Identities = 57/191 (29%), Positives = 81/191 (42%), Gaps = 39/191 (20%)

Query: 34  PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           PK + +K+ DFG +   G  +  Y   + + +YR+PEVLLG   Y   +D+WS+GCI  E
Sbjct: 195 PKRSAIKIVDFGSSCQLGQRIYQY---IQSRFYRSPEVLLG-MPYDLAIDMWSLGCILVE 250

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTP--------------------------------T 121
           + T +PLF G +E+DQ+ +I  VL  P                                 
Sbjct: 251 MHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKR 310

Query: 122 EDNWPGVSKLPDY---KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
           E   PG  KL +    +T  P         H         DL+ + L Y P TRI    A
Sbjct: 311 EYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYA 370

Query: 179 LKHKYFADKTD 189
           L+H +F    D
Sbjct: 371 LQHSFFKKTAD 381

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  112 bits (283), Expect = 3e-30
 Identities = 39/178 (21%), Positives = 65/178 (36%), Gaps = 39/178 (21%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSI 87
           + KS  +K+ DFG A         +  +     + T  YRAPEV+L    +    D+WS 
Sbjct: 195 RTKSTGIKLIDFGCA--------TFKSDYHGSIINTRQYRAPEVILNL-GWDVSSDMWSF 245

Query: 88  GCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED---------------------NWP 126
           GC+ AE+ T   LF+    ++ L  +  ++    ++                      WP
Sbjct: 246 GCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWP 305

Query: 127 GVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
             +   +      +    CL  +     +   D L   L   P  R +    LKHK+ 
Sbjct: 306 ENASSINSI----KHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  112 bits (281), Expect = 5e-30
 Identities = 50/186 (26%), Positives = 66/186 (35%), Gaps = 35/186 (18%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSI 87
             K+  ++VADFG A         + HE     V T  YR PEV+L    ++ P DVWSI
Sbjct: 175 SVKNTSIRVADFGSA--------TFDHEHHTTIVATRHYRPPEVILEL-GWAQPCDVWSI 225

Query: 88  GCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED----------------NWPGVSKL 131
           GCI  E      LFQ     + L  + ++L                       W   S  
Sbjct: 226 GCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSD 285

Query: 132 PDYKTTF--PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
             Y      P  S                DL+ + L + PA RI    AL H +FA  T 
Sbjct: 286 GRYVKENCKPLKSYM---LQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP 342

Query: 190 LPKFAE 195
             +   
Sbjct: 343 EERSFH 348

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  108 bits (273), Expect = 7e-29
 Identities = 52/173 (30%), Positives = 68/173 (39%), Gaps = 33/173 (19%)

Query: 34  PKSNIVKVADFGLARAFGVPVRIYTHE-----VVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
             +  +KV DFG A         Y  E     V T  YRAPEV+L    +S P DVWSIG
Sbjct: 171 LINPDIKVVDFGSA--------TYDDEHHSTLVSTRHYRAPEVILAL-GWSQPCDVWSIG 221

Query: 89  CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTED----------------NWPGVSKLP 132
           CI  E      +F      + L  + R+L    +                 +W   S   
Sbjct: 222 CILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAG 281

Query: 133 DY-KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
            Y          F L + V+   +   DL++K L Y PA RI    ALKH +F
Sbjct: 282 RYVSRACKPLKEFMLSQDVE--HERLFDLIQKMLEYDPAKRITLREALKHPFF 332

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  105 bits (264), Expect = 2e-27
 Identities = 40/181 (22%), Positives = 65/181 (35%), Gaps = 29/181 (16%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
               +K+AD G A             + T  YR+PEVLLG+  + C  D+WS  C+  E+
Sbjct: 173 NLIQIKIADLGNAC--WYDEHYTNS-IQTREYRSPEVLLGAP-WGCGADIWSTACLIFEL 228

Query: 95  ATRKPLFQGDS------EIDQLFRIFRVLTTPTED----------------NWPGVSKLP 132
            T   LF+ D       + D + +I  +L                          +SKL 
Sbjct: 229 ITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLK 288

Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
            +       +     K  K+  ++  D L   L   P  R +A   + H +  D   + +
Sbjct: 289 FWPLE-DVLTE--KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEE 345

Query: 193 F 193
            
Sbjct: 346 I 346

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 90.4 bits (225), Expect = 3e-22
 Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 45/176 (25%)

Query: 32  IKP-----KSNIVKVADFGLARAFGVPVRIYTHEVV--TLWYRAPEVLLGS--------- 75
           +KP        ++K+ DFG+A            +    T+ Y  PE +            
Sbjct: 153 LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 212

Query: 76  -QRYSCPVDVWSIGCIFAEIATRKPLFQG-DSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 133
             + S   DVWS+GCI   +   K  FQ   ++I +L  I                  P+
Sbjct: 213 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID----------------PN 256

Query: 134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
           ++  FP+             ++D  D+L+  L   P  RI+    L H Y   +T 
Sbjct: 257 HEIEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 90.1 bits (223), Expect = 9e-22
 Identities = 22/161 (13%), Positives = 42/161 (26%), Gaps = 32/161 (19%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS-QRYSCPVD 83
             P  N+       + + D       G          V + Y   E L  S   ++  ++
Sbjct: 220 FTP-DNLFIMPDGRLMLGDVSALWKVGTRGPAS---SVPVTYAPREFLNASTATFTHALN 275

Query: 84  VWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
            W +G     +      F   +   +       L  P  D+             F   + 
Sbjct: 276 AWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLA-----------FGSCT- 323

Query: 144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                    L      L+ + L +    R+    A++   F
Sbjct: 324 --------PLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEF 356

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 87.4 bits (217), Expect = 6e-21
 Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 45/175 (25%)

Query: 32  IKP-----KSNIVKVADFGLARAFGVPVRIYTHEVV--TLWYRAPEVLLGS--------- 75
           +KP        ++K+ DFG+A            +    T+ Y  PE +            
Sbjct: 134 LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 193

Query: 76  -QRYSCPVDVWSIGCIFAEIATRKPLFQG-DSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 133
             + S   DVWS+GCI   +   K  FQ   ++I +L  I                  P+
Sbjct: 194 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID----------------PN 237

Query: 134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           ++  FP+             ++D  D+L+  L   P  RI+    L H Y   +T
Sbjct: 238 HEIEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 87.9 bits (218), Expect = 7e-21
 Identities = 38/175 (21%), Positives = 62/175 (35%), Gaps = 45/175 (25%)

Query: 32  IKP-----KSNIVKVADFGLARAFGVPVRIYTHEVV--TLWYRAPEVLLGS--------- 75
           +KP        ++K+ DFG+A            +     + Y  PE +            
Sbjct: 181 LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKS 240

Query: 76  -QRYSCPVDVWSIGCIFAEIATRKPLFQG-DSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 133
             + S   DVWS+GCI   +   K  FQ   ++I +L  I                  P+
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID----------------PN 284

Query: 134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           ++  FP+             ++D  D+L+  L   P  RI+    L H Y   +T
Sbjct: 285 HEIEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 84.8 bits (210), Expect = 9e-20
 Identities = 30/161 (18%), Positives = 55/161 (34%), Gaps = 32/161 (19%)

Query: 39  VKVADFGLARAFGVPVRIYTH---EVVTLWYRAPEVLLGS--QRYSCPVDVWSIGCIFAE 93
             ++DFGL +   V    ++       T  + APE+L     +  +  VD++S GC+F  
Sbjct: 162 AMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYY 221

Query: 94  IATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
           + +     F    +      +                                     K+
Sbjct: 222 VISEGSHPFGKSLQRQANILL------------------GACSLDCLHPE--------KH 255

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
            D    +L+EK +   P  R +A++ LKH +F       +F
Sbjct: 256 EDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQF 296

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 83.7 bits (207), Expect = 3e-19
 Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 35/172 (20%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVV----TLWYRAPEVLLGS------QRYSCPV 82
             ++  + ++DFGL +        +   +     T  +RAPE+L  S      +R +  +
Sbjct: 161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI 220

Query: 83  DVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 141
           D++S+GC+F  I ++ K  F      +    I R           G+  L + K      
Sbjct: 221 DIFSMGCVFYYILSKGKHPFGDKYSRES--NIIR-----------GIFSLDEMK--CLHD 265

Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
                    ++L  +  DL+ + + + P  R  A   L+H  F  K+   +F
Sbjct: 266 ---------RSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEF 308

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 81.5 bits (201), Expect = 1e-18
 Identities = 41/167 (24%), Positives = 62/167 (37%), Gaps = 27/167 (16%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+AD G A         +T ++ T  YR+ EVL+GS  Y+ P D+WS  C+  E+AT  
Sbjct: 235 VKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGD 290

Query: 99  PLFQG------DSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY---------KTTFPEWSN 143
            LF+         + D +  I  +L               ++          T    W  
Sbjct: 291 YLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350

Query: 144 FCLDKHVKNLDQDG------LDLLEKTLIYCPATRINAENALKHKYF 184
           F  +  V+  +          D L   L   P  R  A   L+H + 
Sbjct: 351 F--EVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 80.5 bits (199), Expect = 4e-18
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 28/163 (17%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
              K K  ++K+ DFGL+  F    +     + T +Y APEVL     Y    DVWSIG 
Sbjct: 169 LESKEKDALIKIVDFGLSAVFE-NQKKMKERLGTAYYIAPEVLRKK--YDEKCDVWSIGV 225

Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
           I   +    P F G ++ + L ++ +   T     W  VS                    
Sbjct: 226 ILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVS-------------------- 265

Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                +   DL+++ L +    RI+A+ AL+H +  +     +
Sbjct: 266 -----EGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKE 303

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 78.9 bits (195), Expect = 5e-18
 Identities = 35/173 (20%), Positives = 57/173 (32%), Gaps = 47/173 (27%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIYTHEVV--------------TLWYRAPEV 71
           +KP      +S  VK+ DFGLA+     + I   +                T  Y A EV
Sbjct: 142 LKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201

Query: 72  LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 131
           L G+  Y+  +D++S+G IF E+    P   G   ++ L ++  V      D      K 
Sbjct: 202 LDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKLRSVSIEFPPDFDDNKMK- 258

Query: 132 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                                       ++   + + P  R  A   L   + 
Sbjct: 259 ------------------------VEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 78.7 bits (194), Expect = 9e-18
 Identities = 35/164 (21%), Positives = 55/164 (33%), Gaps = 30/164 (18%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQR-YSCPVDVW 85
               KS  +K+ DFGL++ F        + + T     ++ APEVL  +   Y    D W
Sbjct: 201 FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260

Query: 86  SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
           S G +   +      F G ++        +VL                     P +    
Sbjct: 261 SAGVLLHLLLMGAVPFPGVND-ADTIS--QVLNK-------------KLCFENPNY---- 300

Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                  L     DLL   L      R +A  AL+H + +  +D
Sbjct: 301 -----NVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 78.2 bits (193), Expect = 2e-17
 Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 29/157 (18%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
               NI K+ DFGL+  F          + T +Y APEVL     Y+   DVWS G I  
Sbjct: 183 NSLLNI-KIVDFGLSSFFS-KDYKLRDRLGTAYYIAPEVLKKK--YNEKCDVWSCGVIMY 238

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            +    P F G ++ D + ++ +       ++W  +S                       
Sbjct: 239 ILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNIS----------------------- 275

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
              +  +L++  L Y    R  AE AL  ++     +
Sbjct: 276 --DEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 78.2 bits (193), Expect = 3e-17
 Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 28/160 (17%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
              K K   +++ DFGL+  F    +    ++ T +Y APEVL G+  Y    DVWS G 
Sbjct: 159 LESKSKDANIRIIDFGLSTHFE-ASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGV 215

Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
           I   + +  P F G +E D L ++ +   T     W  VS+                   
Sbjct: 216 ILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE------------------S 257

Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            K       DL+ K L Y P+ RI+A +AL H++    T 
Sbjct: 258 AK-------DLIRKMLTYVPSMRISARDALDHEWIQTYTK 290

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 77.0 bits (190), Expect = 6e-17
 Identities = 43/165 (26%), Positives = 60/165 (36%), Gaps = 28/165 (16%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
              K K   +K+ DFGL+  F          + T +Y APEVL G+  Y    DVWS G 
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGV 210

Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
           I   + +  P F G +E D L R+           W  +S                    
Sbjct: 211 ILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTIS-------------------- 250

Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA 194
                 D  DL+ K L + P+ RI A   L+H +    +      
Sbjct: 251 -----DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTI 290

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 75.6 bits (186), Expect = 9e-17
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 18/161 (11%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG-------SQRYSCPVDVW 85
           +   ++ K+ DFG AR      +  +    T  Y  P++           ++Y   VD+W
Sbjct: 149 EDGQSVYKLTDFGAARELEDDEQFVS-LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLW 207

Query: 86  SIGCIFAEIATRKPLFQGDSEIDQLFRIF-RVLTTPTEDNWPGVSKLP----DYKTTFPE 140
           SIG  F   AT    F+      +   +  +++T        GV K      D+    P 
Sbjct: 208 SIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV 267

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
             +       + L      +L   L          +     
Sbjct: 268 SCSLS-----RGLQVLLTPVLANILEADQEKCWGFDQFFAE 303

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 75.9 bits (187), Expect = 1e-16
 Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 27/160 (16%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQR--YSCPVDVWSI 87
              + +  ++K+ DFG ++  G    + T    T  Y APEVL+      Y+  VD WS+
Sbjct: 272 LSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330

Query: 88  GCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
           G I     +  P F        L    ++ +        G      Y      W      
Sbjct: 331 GVILFICLSGYPPFSEHRTQVSLKD--QITS--------G-----KYNFIPEVW------ 369

Query: 148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 187
                + +  LDL++K L+  P  R   E AL+H +  D+
Sbjct: 370 ---AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 74.2 bits (183), Expect = 2e-16
 Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 35/161 (21%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           +KP          VK+ DFGLAR            V T +Y +PE +     Y+   D+W
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR-MSYNEKSDIW 200

Query: 86  SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
           S+GC+  E+    P F   S+ +   +I                 +P        +S   
Sbjct: 201 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR----------IPYR------YS--- 241

Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                     +  +++ + L      R + E  L++    +
Sbjct: 242 ---------DELNEIITRMLNLKDYHRPSVEEILENPLILE 273

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 74.8 bits (184), Expect = 2e-16
 Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 26/176 (14%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP-VD 83
           +KP SNI       VK++DFG +  + V  +I      T  +  PE       Y+   VD
Sbjct: 178 VKP-SNILMDKNGRVKLSDFGES-EYMVDKKIKG-SRGTYEFMPPEFFSNESSYNGAKVD 234

Query: 84  VWSIGCIFAEIATRKPLFQGDSEIDQLF-RIFRV-LTTPTEDNWPGVSKLPDYKTTFPEW 141
           +WS+G     +      F     + +LF  I    +  P + N           T    +
Sbjct: 235 IWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNF 294

Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA--DKTDLPKFAE 195
                      L  + +D L+  L   PA RI +E+ALKH++ A  +  DL +F++
Sbjct: 295 -----------LSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSK 339

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 74.8 bits (184), Expect = 3e-16
 Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 27/161 (16%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
           C   K++ VK+ DFGLA     P  I      T  + APE++          D+W+IG +
Sbjct: 182 CETKKASSVKIIDFGLATKLN-PDEIVKVTTATAEFAAPEIVDREP-VGFYTDMWAIGVL 239

Query: 91  FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
              + +    F G+ +++ L  + R      ED +  VS                     
Sbjct: 240 GYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVS--------------------- 278

Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
                +  D ++  L   P  R+   +AL+H +        
Sbjct: 279 ----PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNL 315

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 35/159 (22%), Positives = 46/159 (28%), Gaps = 39/159 (24%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           +KP           K+ DFGL    G        +     Y APE+L GS  Y    DV+
Sbjct: 183 VKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV-QEGDPRYMAPELLQGS--YGTAADVF 239

Query: 86  SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
           S+G    E+A    L  G     QL + +                       F       
Sbjct: 240 SLGLTILEVACNMELPHGGEGWQQLRQGY-------------------LPPEFTA----- 275

Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                  L  +   +L   L   P  R  AE  L     
Sbjct: 276 ------GLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 73.7 bits (181), Expect = 9e-16
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 27/162 (16%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
               +SN +K+ DFGL      P +       T  + APEV  G +      D+WS+G +
Sbjct: 288 FTTKRSNELKLIDFGLTAHLD-PKQSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVL 345

Query: 91  FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
              + +    F G+++ + L  +        +  + G+S                     
Sbjct: 346 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS--------------------- 384

Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
               +DG D + K L+  P TR+    AL+H +        +
Sbjct: 385 ----EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGR 422

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 73.2 bits (179), Expect = 1e-15
 Identities = 25/167 (14%), Positives = 41/167 (24%), Gaps = 46/167 (27%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQ----RYS 79
           ++P  +I       V +  F      G                 A  +L   Q      +
Sbjct: 237 LRP-VDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMT 295

Query: 80  CPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP 139
              D W++G     I         D+ +     IFR               +P       
Sbjct: 296 FAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR-----------SCKNIPQP----- 339

Query: 140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                     V+        LLE  L Y    R+    A++   +  
Sbjct: 340 ----------VR-------ALLEGFLRYPKEDRLLPLQAMETPEYEQ 369

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 41/169 (24%), Positives = 62/169 (36%), Gaps = 29/169 (17%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQR--YSCPVDVWSI 87
              + +  ++K+ DFG ++  G    + T    T  Y APEVL+      Y+  VD WS+
Sbjct: 147 LSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205

Query: 88  GCIFAEIATRKPLFQGDSEIDQLFR-IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL 146
           G I     +  P F        L   I         + W  VS                 
Sbjct: 206 GVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS----------------- 248

Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
                   +  LDL++K L+  P  R   E AL+H +  D+    KF +
Sbjct: 249 --------EKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 289

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 72.4 bits (178), Expect = 2e-15
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDV 84
           IK       K   V++ DFG+AR     V       + T +Y +PE+    + Y+   D+
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGIARVLNSTVE-LARACIGTPYYLSPEICEN-KPYNNKSDI 208

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRI 113
           W++GC+  E+ T K  F+  S  + + +I
Sbjct: 209 WALGCVLYELCTLKHAFEAGSMKNLVLKI 237

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 72.0 bits (177), Expect = 2e-15
 Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 27/157 (17%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
           C+   +  +K+ DFGLAR +  P         T  + APEV+      S P D+WS+G I
Sbjct: 220 CVNRDAKQIKIIDFGLARRYK-PREKLKVNFGTPEFLAPEVVNYDF-VSFPTDMWSVGVI 277

Query: 91  FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
              + +    F GD++ + L  I        ++ +  +S                     
Sbjct: 278 AYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDIS--------------------- 316

Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK 187
               ++  + + K LI   + RI+A  ALKH + +D 
Sbjct: 317 ----EEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 71.6 bits (176), Expect = 4e-15
 Identities = 41/171 (23%), Positives = 62/171 (36%), Gaps = 42/171 (24%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
              K K   VK+ADFGLA       + +     T  Y +PEVL     Y  PVD+W+ G 
Sbjct: 143 LASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP-YGKPVDLWACGV 201

Query: 90  I-------FAEIATRKPLFQGDSEIDQLFRIFR-VLTTPTEDNWPGVSKLPDYKTTFPEW 141
           I       +       P F  + +     +I       P+ + W  V+            
Sbjct: 202 ILYILLVGY-------PPFWDEDQHRLYQQIKAGAYDFPSPE-WDTVTP----------- 242

Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                         +  DL+ K L   P+ RI A  ALKH + + ++ +  
Sbjct: 243 --------------EAKDLINKMLTINPSKRITAAEALKHPWISHRSTVAS 279

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 71.4 bits (175), Expect = 4e-15
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 18/161 (11%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG-------SQRYSCPVDVW 85
           +   ++ K+ DFG AR      +  +    T  Y  P++           ++Y   VD+W
Sbjct: 149 EDGQSVYKLTDFGAARELEDDEQFVS-LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLW 207

Query: 86  SIGCIFAEIATRKPLFQGDSEIDQLFRIF-RVLTTPTEDNWPGVSKLP----DYKTTFPE 140
           SIG  F   AT    F+      +   +  +++T        GV K      D+    P 
Sbjct: 208 SIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV 267

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
             +       + L      +L   L          +     
Sbjct: 268 SCSLS-----RGLQVLLTPVLANILEADQEKCWGFDQFFAE 303

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 70.4 bits (173), Expect = 5e-15
 Identities = 34/164 (20%), Positives = 52/164 (31%), Gaps = 43/164 (26%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           +KP       +  VK+ DFGL  +     +       TL Y +PE +   Q Y   VD++
Sbjct: 148 LKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS-KGTLRYMSPEQISS-QDYGKEVDLY 205

Query: 86  SIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           ++G I AE+       F+       L                    + D           
Sbjct: 206 ALGLILAELLHVCDTAFETSKFFTDLRDG----------------IISD----------- 238

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
                    D+    LL+K L   P  R N    L+      K+
Sbjct: 239 -------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 70.8 bits (173), Expect = 6e-15
 Identities = 25/170 (14%), Positives = 44/170 (25%), Gaps = 55/170 (32%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL----------LG 74
           ++P  +I       V +  F      G          V+  +  PE+             
Sbjct: 232 LRP-VDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVSRGFEPPELEARRATISYHRDR 286

Query: 75  SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY 134
               +   D W++G +   I         D+ +     IFR               +P  
Sbjct: 287 RTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFR-----------SCKNIPQP 335

Query: 135 KTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                          V+        LLE  L Y    R+    A++   +
Sbjct: 336 ---------------VR-------ALLEGFLRYPKEDRLLPLQAMETPEY 363

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 71.3 bits (174), Expect = 7e-15
 Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 9/158 (5%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
            P+  I K+ D G A+            V TL Y APE+L   ++Y+  VD WS G +  
Sbjct: 157 GPQRLIHKIIDLGYAKELDQGELCTEF-VGTLQYLAPELLEQ-KKYTVTVDYWSFGTLAF 214

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
           E  T    F  + +  Q     R  +      +  ++    + +  P  +      H+  
Sbjct: 215 ECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPN------HLSG 268

Query: 153 LDQDGL-DLLEKTLIYCPATRINAENALKHKYFADKTD 189
           +    L   L+  L++    R           F     
Sbjct: 269 ILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDS 306

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 70.4 bits (173), Expect = 8e-15
 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
                 +K+ DFGLA         + +   T  + APE++   +      D+WSIG I  
Sbjct: 151 NVPKPRIKIIDFGLAHKID-FGNEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITY 208

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +    F GD++ + L  +  V     ++ +   S                       
Sbjct: 209 ILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS----------------------- 245

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                 D + + L+  P  R+  +++L+H +   K  
Sbjct: 246 --ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 69.5 bits (171), Expect = 1e-14
 Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 29/159 (18%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
            P S + K+ DFGLA  F  P ++   +V T +Y +P+VL G   Y    D WS G +  
Sbjct: 143 SPDSPL-KLIDFGLAARFK-PGKMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMY 198

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            +    P F   ++ + + +I     T  E +W  VS                     + 
Sbjct: 199 VLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVS------------------PQAE- 239

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
                  L+ + L   P  RI +  AL+H++F  +    
Sbjct: 240 ------SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 272

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 70.0 bits (172), Expect = 1e-14
 Identities = 41/161 (25%), Positives = 58/161 (36%), Gaps = 29/161 (18%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K  S  VK+  FG+A   G    +    V T  + APEV+     Y  PVDVW  G I  
Sbjct: 166 KENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP-YGKPVDVWGCGVILF 224

Query: 93  EIATRKPLFQGDSEIDQLFR-IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
            + +    F G  E  +LF  I +         W  +S                  +  K
Sbjct: 225 ILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHIS------------------ESAK 264

Query: 152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                  DL+ + L+  PA RI    AL H +  ++     
Sbjct: 265 -------DLVRRMLMLDPAERITVYEALNHPWLKERDRYAY 298

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 70.0 bits (172), Expect = 1e-14
 Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 27/154 (17%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLA         + +   T  + APE++   +      D+WSIG I   + +  
Sbjct: 158 IKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGA 215

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
             F GD++ + L  I  V     E+ +   S                         +   
Sbjct: 216 SPFLGDTKQETLANITSVSYDFDEEFFSHTS-------------------------ELAK 250

Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
           D + K L+     R+  + AL+H +     +   
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 69.7 bits (171), Expect = 1e-14
 Identities = 39/179 (21%), Positives = 59/179 (32%), Gaps = 49/179 (27%)

Query: 32  IKP------KSNIVKVADFGLARAF------------GVPVRIYTHEVVTLWYRAPEVLL 73
           +KP        ++VKV DFGL  A                   +T +V T  Y +PE + 
Sbjct: 144 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH 203

Query: 74  GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 133
           G   YS  VD++S+G I  E+      F    E  +     R L  P             
Sbjct: 204 G-NSYSHKVDIFSLGLILFELLYP---FSTQMERVRTLTDVRNLKFP------------- 246

Query: 134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                P ++                 +++  L   P  R  A N +++  F D     K
Sbjct: 247 -----PLFTQKY---------PCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGK 291

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 70.1 bits (172), Expect = 1e-14
 Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 27/160 (16%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
                 +K+ DFGLA         + +   T  + APE++   +      D+WSIG I  
Sbjct: 152 NIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITY 209

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + +    F GD++ + L  I  V     E+ +   S                       
Sbjct: 210 ILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS----------------------- 246

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
             +   D + K L+     R+  + AL+H +         
Sbjct: 247 --ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQA 284

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 69.6 bits (171), Expect = 1e-14
 Identities = 34/163 (20%), Positives = 52/163 (31%), Gaps = 31/163 (19%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
                 +++ DFG A+       +      T  + APEVL   Q Y    D+WS+G +  
Sbjct: 153 SGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER-QGYDAACDIWSLGVLLY 211

Query: 93  EIATRKPLFQGDSEIDQLFRIF-RVLTTP---TEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
            + T    F    +      I  R+ +     +   W  VS                   
Sbjct: 212 TMLTGYTPFANGPDDTP-EEILARIGSGKFSLSGGYWNSVS------------------- 251

Query: 149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
                     DL+ K L   P  R+ A   L+H +      LP
Sbjct: 252 ------DTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLP 288

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 69.6 bits (171), Expect = 1e-14
 Identities = 33/161 (20%), Positives = 53/161 (32%), Gaps = 33/161 (20%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFG AR      +       TL Y APE+L     Y    D+WS+G I   + + +
Sbjct: 148 IKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ-NGYDESCDLWSLGVILYTMLSGQ 206

Query: 99  PLFQGDSE---IDQLFRIF-RVLTTP---TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
             FQ             I  ++         + W  VS                  +  K
Sbjct: 207 VPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS------------------QEAK 248

Query: 152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                  DL++  L   P  R+       +++  D + L  
Sbjct: 249 -------DLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSS 282

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 69.5 bits (170), Expect = 2e-14
 Identities = 36/173 (20%), Positives = 60/173 (34%), Gaps = 49/173 (28%)

Query: 32  IKP------KSNIVKVADFGLARAF------------GVPVRIYTHEVVTLWYRAPEVLL 73
           +KP        ++VKV DFGL  A                   +T +V T  Y +PE + 
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIH 249

Query: 74  GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD 133
           G   YS  VD++S+G I  E+      F    E  ++    R L  P             
Sbjct: 250 G-NNYSHKVDIFSLGLILFELLYS---FSTQMERVRIITDVRNLKFP-----------LL 294

Query: 134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
           +   +P+                   +++  L   P  R  A + +++  F +
Sbjct: 295 FTQKYPQEH----------------MMVQDMLSPSPTERPEATDIIENAIFEN 331

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 69.2 bits (170), Expect = 2e-14
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 27/159 (16%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
               +S+ +K+ +FG AR    P   +        Y APEV       S   D+WS+G +
Sbjct: 135 YQTRRSSTIKIIEFGQARQLK-PGDNFRLLFTAPEYYAPEVHQHDV-VSTATDMWSLGTL 192

Query: 91  FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
              + +    F  ++    +  I     T  E+ +  +S                     
Sbjct: 193 VYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS--------------------- 231

Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                + +D +++ L+    +R+ A  AL+H +   K +
Sbjct: 232 ----IEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE 266

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 68.4 bits (168), Expect = 3e-14
 Identities = 44/160 (27%), Positives = 64/160 (40%), Gaps = 28/160 (17%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
              K K   +K+ DFGL+  F          + T +Y APEVL G+  Y    DVWS G 
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGV 210

Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
           I   + +  P F G +E   + +  RV T               Y    P+W        
Sbjct: 211 ILYILLSGTPPFYGKNE-YDILK--RVETG-------------KYAFDLPQW-------- 246

Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            + +  D  DL+ K L + P+ RI A   L+H +    + 
Sbjct: 247 -RTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 68.9 bits (169), Expect = 3e-14
 Identities = 38/170 (22%), Positives = 56/170 (32%), Gaps = 41/170 (24%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
              K K   VK+ADFGLA         +     T  Y +PEVL     YS PVD+W+ G 
Sbjct: 161 LASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGV 218

Query: 90  I-------FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS 142
           I       +       P F  + +     +I           W  V+             
Sbjct: 219 ILYILLVGY-------PPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTP------------ 259

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                        +   L++  L   P  RI A+ ALK  +  ++  +  
Sbjct: 260 -------------EAKSLIDSMLTVNPKKRITADQALKVPWICNRERVAS 296

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 68.6 bits (168), Expect = 4e-14
 Identities = 36/159 (22%), Positives = 57/159 (35%), Gaps = 31/159 (19%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           I+K+ DFG A+       + T    T +Y APEVL G ++Y    D+WS+G I   +   
Sbjct: 202 ILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCG 259

Query: 98  KPLFQGDSEIDQLFRIF-RVLTTP---TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
            P F  +  +     +  R+           W  VS                  + VK  
Sbjct: 260 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------------------EEVK-- 299

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                 L+   L   P  R+     + H +    T +P+
Sbjct: 300 -----MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 333

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 68.1 bits (167), Expect = 4e-14
 Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 31/153 (20%)

Query: 34  PKSNIVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQR-YSCPVDVWSIGCIF 91
             S ++K++DFG ++     +   T     TL Y APE++    R Y    D+WS+GC  
Sbjct: 157 TYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTI 215

Query: 92  AEIATRK-PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
            E+AT K P ++       +F++      P          +P+                 
Sbjct: 216 IEMATGKPPFYELGEPQAAMFKVGMFKVHPE---------IPE----------------- 249

Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
            ++  +    + K     P  R  A + L  ++
Sbjct: 250 -SMSAEAKAFILKCFEPDPDKRACANDLLVDEF 281

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 68.1 bits (167), Expect = 5e-14
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           IKP       + +VK+ D GL R F          V T +Y +PE +     Y+   D+W
Sbjct: 162 IKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIW 220

Query: 86  SIGCIFAEIATRKPLFQGDS-EIDQLFRI 113
           S+GC+  E+A  +  F GD   +  L + 
Sbjct: 221 SLGCLLYEMAALQSPFYGDKMNLYSLCKK 249

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 67.7 bits (166), Expect = 5e-14
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 35/146 (23%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           + K+ D G       P      E     + A EVL  +  +    D++++       A  
Sbjct: 172 MFKIGDLGHVTRISSP---QV-EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGA 227

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
           +PL       DQ   I +              +LP      P+            L Q+ 
Sbjct: 228 EPLP---RNGDQWHEIRQ-------------GRLPR----IPQ-----------VLSQEF 256

Query: 158 LDLLEKTLIYCPATRINAENALKHKY 183
            +LL+  +   P  R +A   +KH  
Sbjct: 257 TELLKVMIHPDPERRPSAMALVKHSV 282

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 67.8 bits (166), Expect = 5e-14
 Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 32/158 (20%)

Query: 32  IKPKSNIVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
           I   +  VK+ D GLA             V+ T  + APE+    ++Y   VDV++ G  
Sbjct: 164 ITGPTGSVKIGDLGLATLKRASFA---KAVIGTPEFMAPEM--YEEKYDESVDVYAFGMC 218

Query: 91  FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
             E+AT +  +       Q++R        T    P  +                     
Sbjct: 219 MLEMATSEYPYSECQNAAQIYRR------VTSGVKP--ASFD------------------ 252

Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
           K    +  +++E  +      R + ++ L H +F ++T
Sbjct: 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEET 290

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 67.6 bits (166), Expect = 6e-14
 Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 41/164 (25%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI-- 90
              +  +K+ DFG+A         + +   T  + APE++   +      D+WSIG I  
Sbjct: 145 NVPNPRIKLIDFGIAHKIE-AGNEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITY 202

Query: 91  -----FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
                          F G+++ + L  I  V     E+ +   S                
Sbjct: 203 ILLSGA-------SPFLGETKQETLTNISAVNYDFDEEYFSNTS---------------- 239

Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                    +   D + + L+  P  R+    +L+H +      
Sbjct: 240 ---------ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 67.2 bits (165), Expect = 8e-14
 Identities = 37/164 (22%), Positives = 63/164 (38%), Gaps = 46/164 (28%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPV-RIYTHEVV--TLWYRAPEVLLGSQRYSCP 81
           +   SN+       +K+ADFGLA    +P  + YT   +  T  Y +PE+      +   
Sbjct: 138 LTL-SNLLLTRNMNIKIADFGLATQLKMPHEKHYT---LCGTPNYISPEIATR-SAHGLE 192

Query: 82  VDVWSIGCIFAEIATRKPLFQGDSEIDQLF-RIFRVLTTPTEDNWPGVSKLPDYKTTFPE 140
            DVWS+GC+F  +   +P F     +     ++                   DY+   P 
Sbjct: 193 SDVWSLGCMFYTLLIGRPPFD-TDTVKNTLNKVVLA----------------DYE--MPS 233

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +           L  +  DL+ + L   PA R++  + L H + 
Sbjct: 234 F-----------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 67.7 bits (166), Expect = 8e-14
 Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 46/164 (28%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPV-RIYTHEVV--TLWYRAPEVLLGSQRYSCP 81
           +K   N+       VK+ DFGLA        R      +  T  Y APEVL   + +S  
Sbjct: 167 LKL-GNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSK-KGHSFE 221

Query: 82  VDVWSIGCIFAEIATRKPLFQGDSEIDQLF-RIFRVLTTPTEDNWPGVSKLPDYKTTFPE 140
           VDVWSIGCI   +   KP F+  S + + + RI +                 +Y    P+
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKN----------------EYS--IPK 262

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                       ++     L++K L   P  R      L  ++F
Sbjct: 263 H-----------INPVAASLIQKMLQTDPTARPTINELLNDEFF 295

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 67.7 bits (166), Expect = 8e-14
 Identities = 34/163 (20%), Positives = 55/163 (33%), Gaps = 32/163 (19%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           K K  ++K+ DFG A+       + T    T +Y APEVL   ++Y    D+WS+G I  
Sbjct: 164 KEKDAVLKLTDFGFAKETT-QNALQTP-CYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMY 220

Query: 93  EIATRKPLFQGDSEIDQLFRIF-RVLTTP---TEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
            +    P F  ++       +  R+           W  VS                   
Sbjct: 221 ILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS------------------- 261

Query: 149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
                 +D   L+   L   P  R+     + H +      +P
Sbjct: 262 ------EDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVP 298

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 66.9 bits (164), Expect = 1e-13
 Identities = 35/149 (23%), Positives = 51/149 (34%), Gaps = 30/149 (20%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
            P S I K+ DFGLA  F       T+   T  Y APEV       +   D+WS G +  
Sbjct: 161 SPHSPI-KIIDFGLAELFK-SDEHSTNAAGTALYMAPEVFKRD--VTFKCDIWSAGVVMY 216

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + T    F G S  +++ +  +                                   + 
Sbjct: 217 FLLTGCLPFTGTSL-EEVQQ--KATY-----------------------KEPNYAVECRP 250

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH 181
           L    +DLL++ L   P  R +A   L H
Sbjct: 251 LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 66.4 bits (163), Expect = 1e-13
 Identities = 38/170 (22%), Positives = 56/170 (32%), Gaps = 41/170 (24%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
              K K   VK+ADFGLA         +     T  Y +PEVL     YS PVD+W+ G 
Sbjct: 138 LASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKD-PYSKPVDIWACGV 195

Query: 90  I-------FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS 142
           I       +       P F  + +     +I           W  V+             
Sbjct: 196 ILYILLVGY-------PPFWDEDQHRLYAQIKAGAYDYPSPEWDTVT------------- 235

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                        +   L++  L   P  RI A+ ALK  +  ++  +  
Sbjct: 236 ------------PEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVAS 273

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 66.4 bits (163), Expect = 1e-13
 Identities = 42/164 (25%), Positives = 63/164 (38%), Gaps = 46/164 (28%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPV-RIYTHEVV--TLWYRAPEVLLGSQRYSCP 81
           +K   N+       VK+ DFGLA        R      +  T  Y APEVL   + +S  
Sbjct: 141 LKL-GNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSK-KGHSFE 195

Query: 82  VDVWSIGCIFAEIATRKPLFQGDSEIDQLF-RIFRVLTTPTEDNWPGVSKLPDYKTTFPE 140
           VDVWSIGCI   +   KP F+  S + + + RI +                 +Y  + P+
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKN----------------EY--SIPK 236

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                       ++     L++K L   P  R      L  ++F
Sbjct: 237 H-----------INPVAASLIQKMLQTDPTARPTINELLNDEFF 269

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 67.0 bits (164), Expect = 1e-13
 Identities = 39/158 (24%), Positives = 56/158 (35%), Gaps = 42/158 (26%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI-------F 91
           +K+ADFGL++     V + T    T  Y APE+L G   Y   VD+WS+G I       F
Sbjct: 190 LKIADFGLSKIVEHQVLMKT-VCGTPGYCAPEILRG-CAYGPEVDMWSVGIITYILLCGF 247

Query: 92  AEIATRKPLFQGDSEIDQLFR-IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
                    F  +     +FR I           W  VS                     
Sbjct: 248 -------EPFYDERGDQFMFRRILNCEYYFISPWWDEVS--------------------- 279

Query: 151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
                +  DL+ K ++  P  R+    AL+H +   K 
Sbjct: 280 ----LNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA 313

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 44/162 (27%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV--TLWYRAPEVLLGSQRYSCPV 82
           IKP  N+       +K+ADFG +    V         +  TL Y  PE++ G + +   V
Sbjct: 135 IKP-ENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKV 188

Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS 142
           D+WS+G +  E    KP F+ ++  +   RI RV                ++   FP++ 
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV----------------EFT--FPDF- 229

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                     + +   DL+ + L + P+ R      L+H + 
Sbjct: 230 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 40/183 (21%), Positives = 55/183 (30%), Gaps = 55/183 (30%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS-----QRYS 79
           +KP  NI       +K+ DFG +     P         T  Y APE++  S       Y 
Sbjct: 150 LKP-ENILLDDDMNIKLTDFGFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYG 207

Query: 80  CPVDVWSIGCI-------FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
             VD+WS G I               P F    ++  L  I           W   S   
Sbjct: 208 KEVDMWSTGVIMYTLLAGS-------PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYS--- 257

Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT--DL 190
                                     DL+ + L+  P  R  AE AL H +F      ++
Sbjct: 258 ----------------------DTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295

Query: 191 PKF 193
             F
Sbjct: 296 RHF 298

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 65.7 bits (161), Expect = 3e-13
 Identities = 36/157 (22%), Positives = 56/157 (35%), Gaps = 28/157 (17%)

Query: 33  KPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
            P  +I K+ DFG++R  G         + T  Y APE+L      +   D+W+IG I  
Sbjct: 168 YPLGDI-KIVDFGMSRKIG-HACELREIMGTPEYLAPEILNYDP-ITTATDMWNIGIIAY 224

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            + T    F G+   +    I +V    +E+ +  VS                       
Sbjct: 225 MLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVS----------------------- 261

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
             Q   D ++  L+  P  R  AE  L H +      
Sbjct: 262 --QLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF 296

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 65.3 bits (160), Expect = 4e-13
 Identities = 36/155 (23%), Positives = 51/155 (32%), Gaps = 30/155 (19%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           + + DFGL++     +         T  Y APEVL   + YS  VD WSIG I   +   
Sbjct: 148 IMITDFGLSKMEQNGI---MSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVITYILLCG 203

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
            P F  ++E     +I           W  +S+                           
Sbjct: 204 YPPFYEETESKLFEKIKEGYYEFESPFWDDISE-------------------------SA 238

Query: 158 LDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
            D +   L   P  R   E AL H +    T L +
Sbjct: 239 KDFICHLLEKDPNERYTCEKALSHPWIDGNTALHR 273

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 36/171 (21%), Positives = 55/171 (32%), Gaps = 57/171 (33%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGS-----QRY 78
           +KP  NI       ++++DFG +       ++    +  T  Y APE+L  S       Y
Sbjct: 226 LKP-ENILLDDNMQIRLSDFGFSCHLEPGEKLRE--LCGTPGYLAPEILKCSMDETHPGY 282

Query: 79  SCPVDVWSIGCI-------FAEIATRKPLFQGDSEIDQLFR-IFRVLTTPTEDNWPGVSK 130
              VD+W+ G I               P F    +   + R I       +   W   S 
Sbjct: 283 GKEVDLWACGVILFTLLAGS-------PPFWHRRQ-ILMLRMIMEGQYQFSSPEWDDRS- 333

Query: 131 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
                                       DL+ + L   P  R+ AE AL+H
Sbjct: 334 ------------------------STVKDLISRLLQVDPEARLTAEQALQH 360

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 62.7 bits (153), Expect = 3e-12
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG-SQRYSCPVDVWSIGCIFAEIAT 96
             KVADFGL++     V   +  +    + APE +    + Y+   D +S   I   I T
Sbjct: 167 CAKVADFGLSQQS---VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT 223

Query: 97  RKPLFQG 103
            +  F  
Sbjct: 224 GEGPFDE 230

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 61.8 bits (151), Expect = 5e-12
 Identities = 41/162 (25%), Positives = 61/162 (37%), Gaps = 44/162 (27%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV--TLWYRAPEVLLGSQRYSCPV 82
           IKP  N+       +K+ADFG +      +R  T   +  TL Y  PE++ G + +   V
Sbjct: 140 IKP-ENLLMGYKGELKIADFGWS-VHAPSLRRRT---MCGTLDYLPPEMIEG-KTHDEKV 193

Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS 142
           D+W  G +  E     P F   S  +   RI  V                D K  FP + 
Sbjct: 194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV----------------DLK--FPPF- 234

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                     L     DL+ K L Y P  R+  +  ++H + 
Sbjct: 235 ----------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV 266

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 61.7 bits (150), Expect = 1e-11
 Identities = 26/167 (15%), Positives = 48/167 (28%), Gaps = 41/167 (24%)

Query: 32  IKPKSNI--------VKVADFGLARAFGVPVRIYTHEVV-----TLWYRAPEVLLGSQRY 78
           +K   N+          + DFG A          +         T  + APEV++G    
Sbjct: 176 VKA-DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-C 233

Query: 79  SCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF 138
              VD+WS  C+   +      +          +I       +E   P + ++P      
Sbjct: 234 DAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI------ASEP--PPIREIPP----- 280

Query: 139 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA 185
                        +        +++ L   P  R +A    +    A
Sbjct: 281 -------------SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 61.1 bits (149), Expect = 1e-11
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 3/81 (3%)

Query: 23  LFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           + +          + I+K+ DFGLAR                 + APEV+  S  +S   
Sbjct: 139 ILILQKVENGDLSNKILKITDFGLARE--WHRTTKMSAAGAYAWMAPEVIRAS-MFSKGS 195

Query: 83  DVWSIGCIFAEIATRKPLFQG 103
           DVWS G +  E+ T +  F+G
Sbjct: 196 DVWSYGVLLWELLTGEVPFRG 216

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 61.2 bits (149), Expect = 1e-11
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K   VKV DFGL+R              T  + APEVL   +  +   DV+S G I  E+
Sbjct: 174 KKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD-EPSNEKSDVYSFGVILWEL 232

Query: 95  ATRKPLFQG 103
           AT +  +  
Sbjct: 233 ATLQQPWGN 241

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 60.4 bits (147), Expect = 2e-11
 Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 39/163 (23%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQR-YSCP-V 82
           IKP SN+       +K+ADFG++  F     + ++ V T  + APE L  +++ +S   +
Sbjct: 163 IKP-SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKAL 221

Query: 83  DVWSIGCI-FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 141
           DVW++G   +  +  + P F  +  I  L                   K+      FP+ 
Sbjct: 222 DVWAMGVTLYCFVFGQCP-FMDER-IMCLHS-----------------KIKSQALEFPDQ 262

Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
            +           +D  DL+ + L   P +RI       H + 
Sbjct: 263 PDI---------AEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 60.4 bits (147), Expect = 2e-11
 Identities = 39/198 (19%), Positives = 61/198 (30%), Gaps = 56/198 (28%)

Query: 22  RLFLQ---ATSFC---------IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV 62
             F Q      +          IKP  N+       +K++  G+A A        T    
Sbjct: 113 GYFCQLIDGLEYLHSQGIVHKDIKP-GNLLLTTGGTLKISALGVAEALHPFAADDTCRTS 171

Query: 63  --TLWYRAPEVLLGSQRYSCP-VDVWSIGCI-FAEIATRKPLFQGDSEIDQLFRIFRVLT 118
             +  ++ PE+  G   +S   VD+WS G   +       P F+GD+ I +LF       
Sbjct: 172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP-FEGDN-IYKLFE------ 223

Query: 119 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
                       +       P                   DLL+  L Y PA R +    
Sbjct: 224 -----------NIGKGSYAIPGD-----------CGPPLSDLLKGMLEYEPAKRFSIRQI 261

Query: 179 LKHKYFADKTDLPKFAEY 196
            +H +F  +   P     
Sbjct: 262 RQHSWF--RKKHPPAEAP 277

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 60.0 bits (146), Expect = 3e-11
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
            ++K+ DFG A          T+   +  + APEV  G   YS   DV+S G I  E+ T
Sbjct: 143 TVLKICDFGTAC---DIQTHMTNNKGSAAWMAPEVFEG-SNYSEKCDVFSWGIILWEVIT 198

Query: 97  RKPLFQG 103
           R+  F  
Sbjct: 199 RRKPFDE 205

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 59.6 bits (145), Expect = 4e-11
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 4/79 (5%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYR--APEVLLG--SQRYSCPVDVWSIGCI 90
           + N VK+ DFGLA         +  E ++      APEV+    S  YS   DV++ G +
Sbjct: 155 EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV 214

Query: 91  FAEIATRKPLFQGDSEIDQ 109
             E+ T +  +   +  DQ
Sbjct: 215 LYELMTGQLPYSNINNRDQ 233

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 58.9 bits (143), Expect = 8e-11
 Identities = 24/168 (14%), Positives = 44/168 (26%), Gaps = 45/168 (26%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVR---------IYTHEVVTLWYRAPEVLLGSQ 76
           +KP            + D G      + V           +  +  T+ YRAPE+     
Sbjct: 160 LKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQS 219

Query: 77  R--YSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPD 133
                   DVWS+GC+   +   +  +    +  D +    +                  
Sbjct: 220 HCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN----------------- 262

Query: 134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
            + + P+                   LL   +   P  R +    L  
Sbjct: 263 -QLSIPQSPRH---------SSALWQLLNSMMTVDPHQRPHIPLLLSQ 300

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 58.8 bits (143), Expect = 8e-11
 Identities = 29/176 (16%), Positives = 51/176 (28%), Gaps = 51/176 (28%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-------TLWYRAPEVLLG----SQRYSCPVDVWSI 87
           VK+ DF L     +                 +  Y APEV+      +  Y    D+WS+
Sbjct: 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212

Query: 88  GCI-----------FAEIATRKPLFQGDSEIDQLFRIF-RVLTTP---TEDNWPGVSKLP 132
           G I                +     +G++       +F  +        + +W  +S   
Sbjct: 213 GVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHIS--- 269

Query: 133 DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT 188
                             K       DL+ K L+     R++A   L+H +     
Sbjct: 270 ---------------CAAK-------DLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 58.4 bits (142), Expect = 9e-11
 Identities = 48/195 (24%), Positives = 69/195 (35%), Gaps = 54/195 (27%)

Query: 22  RLFLQ---ATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVV 62
           R F Q      +          IKP       + N+ K++DFGLA  F    R      +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKM 167

Query: 63  --TLWYRAPEVLLGSQRYSCP-VDVWSIGCI-FAEIATRKPLFQGDSEIDQLFRIFRVLT 118
             TL Y APE+L   + +    VDVWS G +  A +A   P +   S+  Q +       
Sbjct: 168 CGTLPYVAPELLKR-REFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYS------ 219

Query: 119 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
                         + KT    W            D   L LL K L+  P+ RI   + 
Sbjct: 220 -----------DWKEKKTYLNPWKKI---------DSAPLALLHKILVENPSARITIPDI 259

Query: 179 LKHKYFADKTDLPKF 193
            K +++     L K 
Sbjct: 260 KKDRWY--NKPLKKG 272

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 58.5 bits (142), Expect = 1e-10
 Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 65/189 (34%)

Query: 32  IKPKSNI-------VKVADFG--------LARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ 76
           IKP SNI       +K+ DFG        +A+         T +     Y APE +  S 
Sbjct: 152 IKP-SNILLDRSGNIKLCDFGISGQLVDSIAK---------TRDAGCRPYMAPERIDPSA 201

Query: 77  R---YSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFR----VLTTPTEDNWPGV 128
               Y    DVWS+G    E+AT R P  + +S  DQL ++ +     L+   E  +   
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFS-- 259

Query: 129 SKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD-- 186
                   +F  + N CL K                     + R   +  LKH +     
Sbjct: 260 -------PSFINFVNLCLTKD-------------------ESKRPKYKELLKHPFILMYE 293

Query: 187 --KTDLPKF 193
               ++  +
Sbjct: 294 ERAVEVACY 302

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 58.2 bits (141), Expect = 1e-10
 Identities = 28/170 (16%), Positives = 45/170 (26%), Gaps = 51/170 (30%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIYTH------------EVVTLWYRAPEV-- 71
           +K           +K+ DFG A                           T  YR PE+  
Sbjct: 164 LKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID 223

Query: 72  LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL 131
           L  +       D+W++GCI   +  R+  F+  +      RI                  
Sbjct: 224 LYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA----KLRIVNG--------------- 264

Query: 132 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
              K + P         H          L+   L   P  R++    +  
Sbjct: 265 ---KYSIPPHDTQYTVFH---------SLIRAMLQVNPEERLSIAEVVHQ 302

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 58.1 bits (141), Expect = 1e-10
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 15/83 (18%)

Query: 35  KSNIVKVADFGLAR-------------AFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSC 80
           ++  V VADFGLAR             +   P R   + VV   ++ APE++ G + Y  
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING-RSYDE 201

Query: 81  PVDVWSIGCIFAEIATRKPLFQG 103
            VDV+S G +  EI  R      
Sbjct: 202 KVDVFSFGIVLCEIIGRVNADPD 224

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 16/85 (18%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQ---RYSC 80
           +KP  NI         + DFG+A A            V TL+Y APE    S    R   
Sbjct: 160 VKP-ENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYR--- 215

Query: 81  PVDVWSIGCIFAEIATRKPLFQGDS 105
             D++++ C+  E  T  P +QGD 
Sbjct: 216 -ADIYALTCVLYECLTGSPPYQGDQ 239

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 57.3 bits (139), Expect = 3e-10
 Identities = 47/194 (24%), Positives = 65/194 (33%), Gaps = 54/194 (27%)

Query: 22  RLFLQ---ATSFC---------IKP-------KSNIVKVADFGLARAF--GVPVRIYTHE 60
           R F Q      +          IKP       + N+ K++DFGLA  F      R+    
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNL-KISDFGLATVFRYNNRERLLNKM 167

Query: 61  VVTLWYRAPEVLLGSQRYSCP-VDVWSIGCI-FAEIATRKPLFQGDSEIDQLFRIFRVLT 118
             TL Y APE+L   + +    VDVWS G +  A +A   P  Q      +         
Sbjct: 168 CGTLPYVAPELLKR-REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-- 224

Query: 119 TPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA 178
                           KT    W            D   L LL K L+  P+ RI   + 
Sbjct: 225 ----------------KTYLNPWKKI---------DSAPLALLHKILVENPSARITIPDI 259

Query: 179 LKHKYFADKTDLPK 192
            K +++     L K
Sbjct: 260 KKDRWY--NKPLKK 271

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 57.2 bits (138), Expect = 4e-10
 Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 21/84 (25%)

Query: 32  IKPKSNI------VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPV-- 82
           +KP  NI      +K+ D G               +  T  ++APE++        P   
Sbjct: 208 LKP-ENIMLTEEQLKLIDLGAVSRINS-----FGYLYGTPGFQAPEIVRTG-----PTVA 256

Query: 83  -DVWSIGCIFAEIATRKPLFQGDS 105
            D++++G   A +    P   G  
Sbjct: 257 TDIYTVGRTLAALTLDLPTRNGRY 280

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 56.1 bits (136), Expect = 6e-10
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ--RYSCPVDVWSIGCIFA 92
           +    +++   +  +F  P R+Y        + APE L            D+WS   +  
Sbjct: 148 EDMTARISMADVKFSFQSPGRMYAPA-----WVAPEALQKKPEDTNRRSADMWSFAVLLW 202

Query: 93  EIATRKPLFQG 103
           E+ TR+  F  
Sbjct: 203 ELVTREVPFAD 213

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 56.5 bits (137), Expect = 6e-10
 Identities = 45/196 (22%), Positives = 77/196 (39%), Gaps = 54/196 (27%)

Query: 22  RLFLQ---ATSFC---------IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV 62
             F Q   A  +C         +K + N+       +K+ADFG +  F V  ++      
Sbjct: 118 SKFRQIVSAVQYCHQKRIVHRDLKAE-NLLLDADMNIKIADFGFSNEFTVGGKLDAF-CG 175

Query: 63  TLWYRAPEVLLGSQRYSCP-VDVWSIGCI-FAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
              Y APE+  G ++Y  P VDVWS+G I +  ++   P F G + + +L    RVL   
Sbjct: 176 APPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLP-FDGQN-LKELRE--RVLR-- 228

Query: 121 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 180
                 G  ++P Y                  +  D  +LL++ L+  P  R   E  +K
Sbjct: 229 ------GKYRIPFY------------------MSTDCENLLKRFLVLNPIKRGTLEQIMK 264

Query: 181 HKYFADKTDLPKFAEY 196
            ++     +  +   +
Sbjct: 265 DRWINAGHEEDELKPF 280

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 56.1 bits (136), Expect = 6e-10
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 10/82 (12%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVD 83
           IKP  NI       +K+ DFG+A+A        T+ V+ T+ Y +PE   G +      D
Sbjct: 137 IKP-QNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG-EATDECTD 194

Query: 84  VWSIGCIFAEIATRKPLFQGDS 105
           ++SIG +  E+   +P F G++
Sbjct: 195 IYSIGIVLYEMLVGEPPFNGET 216

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 56.3 bits (136), Expect = 7e-10
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 14/92 (15%)

Query: 32  IKPKSNI-------VKVADFGLARAFGV-PVRIYTHEVV-TLWYRAPEVLLGS----QRY 78
           IK K N+         +ADFGLA  F        TH  V T  Y APEVL G+    +  
Sbjct: 157 IKSK-NVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDA 215

Query: 79  SCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL 110
              +D++++G +  E+A+R     G  +   L
Sbjct: 216 FLRIDMYAMGLVLWELASRCTAADGPVDEYML 247

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 55.9 bits (135), Expect = 8e-10
 Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 17/91 (18%)

Query: 32  IKPKSNI-------VKVADFGLARAF----GVPVRIYTHEVVTLWYRAPEVLLGS----- 75
           +K K NI         +AD GLA               H V T  Y APEVL  S     
Sbjct: 173 LKSK-NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 231

Query: 76  QRYSCPVDVWSIGCIFAEIATRKPLFQGDSE 106
                  D++++G +F EIA R  +     +
Sbjct: 232 FESFKRADIYAMGLVFWEIARRCSIGGIHED 262

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 56.2 bits (136), Expect = 8e-10
 Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 54/195 (27%)

Query: 22  RLFLQ---ATSFC---------IKP--------KSNIVKVADFGLARAFGVPVRIYTHEV 61
             F Q     S+C         +K          +  +K+ DFG +++  +  +  +  V
Sbjct: 120 FFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TV 178

Query: 62  VTLWYRAPEVLLGSQRYSCP-VDVWSIGCI-FAEIATRKPLFQGDSEIDQLFR--IFRVL 117
            T  Y APEVLL  Q Y     DVWS G   +  +    P F+ D E  + +R  I R+L
Sbjct: 179 GTPAYIAPEVLLR-QEYDGKIADVWSCGVTLYVMLVGAYP-FE-DPEEPRDYRKTIQRIL 235

Query: 118 TTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAEN 177
           +            +PD                   +  +   L+ +  +  PATRI+   
Sbjct: 236 S--------VKYSIPDDI----------------RISPECCHLISRIFVADPATRISIPE 271

Query: 178 ALKHKYFADKTDLPK 192
              H +F    +LP 
Sbjct: 272 IKTHSWF--LKNLPA 284

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 55.9 bits (135), Expect = 9e-10
 Identities = 26/96 (27%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 32  IKPKSNI-------VKVADFGLARAF----GVPVRIYTHEVVTLWYRAPEVLLGS----- 75
           +K K NI         +AD GLA  F              V T  Y  PEVL  S     
Sbjct: 168 LKSK-NILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH 226

Query: 76  QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLF 111
            +     D++S G I  E+A R        E    +
Sbjct: 227 FQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 55.5 bits (134), Expect = 1e-09
 Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 40/157 (25%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP-VDVWSIGCI-FAEIAT 96
           +K+ DFG A         YT    T+ Y APEVL+G   Y  P +++WS+G   +  +  
Sbjct: 169 IKLIDFGSAAYLERGKLFYTF-CGTIEYCAPEVLMG-NPYRGPELEMWSLGVTLYTLVFE 226

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
             P F    E  +                      P                    + ++
Sbjct: 227 ENP-FCELEETVE-----------------AAIHPPYL------------------VSKE 250

Query: 157 GLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
            + L+   L   P  R   E  +   +     +L  +
Sbjct: 251 LMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADY 287

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 55.4 bits (134), Expect = 1e-09
 Identities = 27/158 (17%), Positives = 45/158 (28%), Gaps = 52/158 (32%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFG A                      E     ++Y    D+WS+G I   +    
Sbjct: 159 LKLTDFGFA---------------------KETT--GEKYDKSCDMWSLGVIMYILLCGY 195

Query: 99  PLFQGDSEIDQLFRIF-RVLTTP---TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
           P F  +  +     +  R+           W  VS+                   VK   
Sbjct: 196 PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE------------------EVK--- 234

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                L+   L   P  R+     + H +    T +P+
Sbjct: 235 ----MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 268

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 55.7 bits (134), Expect = 2e-09
 Identities = 34/156 (21%), Positives = 52/156 (33%), Gaps = 39/156 (25%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           V+++D GLA  F    +   H  V T  Y APEVL     Y    D +S+GC+  ++   
Sbjct: 331 VRISDLGLACDF---SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

Query: 98  KPLFQGDSEID--QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
              F+     D  ++ R    LT   E                P+               
Sbjct: 388 HSPFRQHKTKDKHEIDR--MTLTMAVE---------------LPDS-----------FSP 419

Query: 156 DGLDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
           +   LLE  L      R+      A+   +  +F  
Sbjct: 420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 17/91 (18%)

Query: 32  IKPKSNI-------VKVADFGLAR----AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSC 80
           +K K NI         +AD GLA     +           V T  Y APEVL  + +  C
Sbjct: 139 LKSK-NILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDC 197

Query: 81  P-----VDVWSIGCIFAEIATRKPLFQGDSE 106
                 VD+W+ G +  E+A R        +
Sbjct: 198 FDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 54.3 bits (131), Expect = 3e-09
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 13/80 (16%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL---WYR--APEVL--------LGSQRYSCPVD 83
             V + DFGL    GV       + + +   W    APE++             +S   D
Sbjct: 166 GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSD 225

Query: 84  VWSIGCIFAEIATRKPLFQG 103
           V+++G I+ E+  R+  F+ 
Sbjct: 226 VFALGTIWYELHAREWPFKT 245

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 54.2 bits (131), Expect = 3e-09
 Identities = 39/188 (20%), Positives = 63/188 (33%), Gaps = 62/188 (32%)

Query: 32  IKPKSNI-------VKVADFG--------LARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ 76
           +KP SN+       VK+ DFG        +A+           +     Y APE +    
Sbjct: 136 VKP-SNVLINALGQVKMCDFGISGYLVDDVAK---------DIDAGCKPYMAPERINPEL 185

Query: 77  R---YSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP 132
               YS   D+WS+G    E+A  R P     +   QL ++        E + P   +LP
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV------VEEPS-P---QLP 235

Query: 133 DYKTTFPEWS-NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH----KYFADK 187
                  ++S  F              D   + L      R      ++H     + +  
Sbjct: 236 A-----DKFSAEFV-------------DFTSQCLKKNSKERPTYPELMQHPFFTLHESKG 277

Query: 188 TDLPKFAE 195
           TD+  F +
Sbjct: 278 TDVASFVK 285

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 54.4 bits (131), Expect = 4e-09
 Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 38/156 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           ++++D GLA        I    V T+ Y APEV+   +RY+   D W++GC+  E+   +
Sbjct: 325 IRISDLGLAVHVPEGQTIKGR-VGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQ 382

Query: 99  PLFQGDSE---IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ 155
             FQ   +    +++ R   V   P E               + E               
Sbjct: 383 SPFQQRKKKIKREEVER--LVKEVPEE---------------YSER-----------FSP 414

Query: 156 DGLDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
               L  + L   PA R+     +A    +H  F  
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 53.9 bits (130), Expect = 4e-09
 Identities = 37/183 (20%), Positives = 57/183 (31%), Gaps = 58/183 (31%)

Query: 22  RLFLQ---ATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVV 62
             F Q   A   C         IK        +    K+ DFG   A  +    YT    
Sbjct: 143 CFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSG-AL-LHDEPYTDFDG 200

Query: 63  TLWYRAPEVLLGSQRYSCPVDVWSIGCI-FAEIATRKPLFQGDSEIDQLFRIFRVLTTPT 121
           T  Y  PE +   Q ++ P  VWS+G + +  +    P F+ D EI              
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP-FERDQEIL------------- 246

Query: 122 EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
                      + +  FP             +  D   L+ + L   P++R + E  L  
Sbjct: 247 -----------EAELHFPAH-----------VSPDCCALIRRCLAPKPSSRPSLEEILLD 284

Query: 182 KYF 184
            + 
Sbjct: 285 PWM 287

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 53.5 bits (129), Expect = 6e-09
 Identities = 35/188 (18%), Positives = 57/188 (30%), Gaps = 60/188 (31%)

Query: 31  CIKPKSNI-------VKVADFG--------LARAFGVPVRIYTHEVVTLWYRAPEVL--- 72
            +KP SNI       +K+ DFG         A+                 Y APE +   
Sbjct: 150 DVKP-SNILLDERGQIKLCDFGISGRLVDDKAK---------DRSAGCAAYMAPERIDPP 199

Query: 73  -LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK 130
                 Y    DVWS+G    E+AT + P     ++ + L ++  +   P     P +  
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV--LQEEP-----PLLPG 252

Query: 131 LPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF----AD 186
              +   F  +   CL K                       R      L+H +       
Sbjct: 253 HMGFSGDFQSFVKDCLTKD-------------------HRKRPKYNKLLEHSFIKRYETL 293

Query: 187 KTDLPKFA 194
           + D+  + 
Sbjct: 294 EVDVASWF 301

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 53.4 bits (129), Expect = 6e-09
 Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 12/84 (14%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTH--EVV-TLWYRAPEVLLGSQRYSCP 81
           +KP +NI       VKV DFG+ARA        T    V+ T  Y +PE   G       
Sbjct: 142 VKP-ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDAR 199

Query: 82  VDVWSIGCIFAEIATRKPLFQGDS 105
            DV+S+GC+  E+ T +P F GDS
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDS 223

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 52.9 bits (127), Expect = 1e-08
 Identities = 43/197 (21%), Positives = 67/197 (34%), Gaps = 46/197 (23%)

Query: 32  IKPKSNI-------VKVADFG--------LARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ 76
           +KP SNI       +K+ DFG        +A +F          V T  Y +PE L G+ 
Sbjct: 158 VKP-SNILVNSRGEIKLCDFGVSGQLIDSMANSF----------VGTRSYMSPERLQGTH 206

Query: 77  RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT 136
            YS   D+WS+G    E+A  +         +        +     +  P          
Sbjct: 207 -YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265

Query: 137 TFPEWSN-----FCLDKHVKNLDQDGL----------DLLEKTLIYCPATRINAENALKH 181
            F   S      F L  ++ N     L          D + K LI  PA R + +  + H
Sbjct: 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325

Query: 182 ----KYFADKTDLPKFA 194
               +  A++ D   + 
Sbjct: 326 AFIKRSDAEEVDFAGWL 342

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 36/167 (21%), Positives = 51/167 (30%), Gaps = 42/167 (25%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV--TLWYRAPEVLL--GSQRYSC 80
           +KP  NI       V + DF +A       +I T   +  T  Y APE+        YS 
Sbjct: 141 MKPD-NILLDEHGHVHITDFNIAAMLPRETQITT---MAGTKPYMAPEMFSSRKGAGYSF 196

Query: 81  PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 140
            VD WS+G    E+   +  +   S       I                       T+P 
Sbjct: 197 AVDWWSLGVTAYELLRGRRPYHIRSS-TSSKEIVH--------------TFETTVVTYPS 241

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI-NAENALKHKYFAD 186
                         Q+ + LL+K L   P  R     +     Y  D
Sbjct: 242 A-----------WSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 52.5 bits (126), Expect = 1e-08
 Identities = 52/203 (25%), Positives = 76/203 (37%), Gaps = 76/203 (37%)

Query: 22  RLFLQ---ATSFC---------IKP-------KSNIVKVADFGLARAF----------GV 52
           RLF Q      +C         +KP         N  K+ADFGL+             G 
Sbjct: 120 RLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRTSCGS 178

Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCP-VDVWSIGCI-FAEIATRKPLFQGDSEIDQL 110
           P            Y APEV+ G + Y+ P VD+WS G I +A +    P F  D  +  L
Sbjct: 179 PN-----------YAAPEVISG-RLYAGPEVDIWSSGVILYALLCGTLP-FDDDH-VPTL 224

Query: 111 FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPA 170
           F+  ++          G+   P Y                  L+   + LL+  L   P 
Sbjct: 225 FK--KICD--------GIFYTPQY------------------LNPSVISLLKHMLQVDPM 256

Query: 171 TRINAENALKHKYFADKTDLPKF 193
            R   ++  +H++F  K DLPK+
Sbjct: 257 KRATIKDIREHEWF--KQDLPKY 277

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 48/207 (23%), Positives = 74/207 (35%), Gaps = 76/207 (36%)

Query: 22  RLFLQ---ATSFC---------IKP-------KSNIVKVADFGLARAF----------GV 52
           R F Q   A  +C         +KP         N+ K+ADFGL+             G 
Sbjct: 112 RFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNV-KIADFGLSNIMTDGNFLKTSCGS 170

Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCP-VDVWSIGCI-FAEIATRKPLFQGDSEIDQL 110
           P            Y APEV+ G + Y+ P VDVWS G + +  +  R P F  +  I  L
Sbjct: 171 PN-----------YAAPEVING-KLYAGPEVDVWSCGIVLYVMLVGRLP-FDDEF-IPNL 216

Query: 111 FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPA 170
           F+  +V +         V  +PD+                  L      L+ + ++  P 
Sbjct: 217 FK--KVNS--------CVYVMPDF------------------LSPGAQSLIRRMIVADPM 248

Query: 171 TRINAENALKHKYFADKTDLPKFAEYY 197
            RI  +   +  +F    +LP +    
Sbjct: 249 QRITIQEIRRDPWF--NVNLPDYLRPM 273

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 51/203 (25%), Positives = 74/203 (36%), Gaps = 76/203 (37%)

Query: 22  RLFLQ---ATSFC---------IKP-------KSNIVKVADFGLARAF----------GV 52
           RLF Q   A  +C         +KP         N  K+ADFGL+             G 
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRTSCGS 173

Query: 53  PVRIYTHEVVTLWYRAPEVLLGSQRYSCP-VDVWSIGCI-FAEIATRKPLFQGDSEIDQL 110
           P            Y APEV+ G + Y+ P VD+WS G I +A +    P F  +  +  L
Sbjct: 174 PN-----------YAAPEVISG-RLYAGPEVDIWSCGVILYALLCGTLP-FDDEH-VPTL 219

Query: 111 FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPA 170
           F+                 K+       PE+           L++    LL   L   P 
Sbjct: 220 FK-----------------KIRGGVFYIPEY-----------LNRSVATLLMHMLQVDPL 251

Query: 171 TRINAENALKHKYFADKTDLPKF 193
            R   ++  +H++F  K DLP +
Sbjct: 252 KRATIKDIREHEWF--KQDLPSY 272

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 33/157 (21%), Positives = 53/157 (33%), Gaps = 39/157 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           V+++D GLA       +  T     T  + APE+LLG + Y   VD +++G    E+   
Sbjct: 328 VRISDLGLAVE-LKAGQTKTKGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAA 385

Query: 98  KPLFQGDSE---IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
           +  F+   E     +L +  RVL                    +P+              
Sbjct: 386 RGPFRARGEKVENKELKQ--RVLEQAVT---------------YPDK-----------FS 417

Query: 155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
               D  E  L   P  R+     + +    H  F D
Sbjct: 418 PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 51.3 bits (123), Expect = 4e-08
 Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 43/172 (25%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLG------SQR 77
           IKP  NI       +++ADFG          + +   V T  Y +PE+L        +  
Sbjct: 188 IKPD-NILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGS 246

Query: 78  YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 137
           Y    D W++G    E+   +  F  DS   + +                  K+  YK  
Sbjct: 247 YGPECDWWALGVFAYEMFYGQTPFYADST-AETYG-----------------KIVHYKEH 288

Query: 138 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI--NAENALK-HKYFAD 186
                        + + ++  D +++ L+  P TR+        + H +F  
Sbjct: 289 LSLPL------VDEGVPEEARDFIQR-LLCPPETRLGRGGAGDFRTHPFFFG 333

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 50.8 bits (122), Expect = 5e-08
 Identities = 35/184 (19%), Positives = 52/184 (28%), Gaps = 60/184 (32%)

Query: 22  RLFLQ---ATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVV 62
             F Q   A   C         IK            +K+ DFG   A  +   +YT    
Sbjct: 153 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-AL-LKDTVYTDFDG 210

Query: 63  TLWYRAPEVLLGSQRYSCP-VDVWSIGCI-FAEIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           T  Y  PE +    RY      VWS+G + +  +    P F+ D EI +           
Sbjct: 211 TRVYSPPEWIRY-HRYHGRSAAVWSLGILLYDMVCGDIP-FEHDEEIIR--GQVF----- 261

Query: 121 TEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 180
                            F +            +  +   L+   L   P+ R   E    
Sbjct: 262 -----------------FRQR-----------VSSECQHLIRWCLALRPSDRPTFEEIQN 293

Query: 181 HKYF 184
           H + 
Sbjct: 294 HPWM 297

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 50.7 bits (121), Expect = 5e-08
 Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 3/76 (3%)

Query: 39  VKVADFGLARAFGV--PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
           + + D G +    +     I+T +  T  ++  E+L   + ++  +D + +      +  
Sbjct: 222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLF 280

Query: 97  RKPLFQGDSEIDQLFR 112
              +   +   +    
Sbjct: 281 GTYMKVKNEGGECKPE 296

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 50.3 bits (121), Expect = 6e-08
 Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 38/156 (24%)

Query: 39  VKVADFGLA-RAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT 96
           +++ DFG A        +   +  V T  Y +PE+L   +      D+W++GCI  ++  
Sbjct: 169 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVA 227

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
             P F+  +E    + IF+              K+   +  FPE                
Sbjct: 228 GLPPFRAGNE----YLIFQ--------------KIIKLEYDFPEK-----------FFPK 258

Query: 157 GLDLLEKTLIYCPATRI-----NAENALK-HKYFAD 186
             DL+EK L+     R+          LK H +F  
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 294

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 50.6 bits (121), Expect = 8e-08
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
            + KVADFGLAR   +    YT          W  APE  L   R++   DVWS G +  
Sbjct: 400 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWT-APEAAL-YGRFTIKSDVWSFGILLT 455

Query: 93  EIAT 96
           E+ T
Sbjct: 456 ELTT 459

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 50.5 bits (121), Expect = 8e-08
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 41/170 (24%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLL----GSQRYS 79
           IKP  NI       +++ADFG          + +   V T  Y +PE+L     G  RY 
Sbjct: 201 IKPD-NILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYG 259

Query: 80  CPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP 139
              D WS+G    E+   +  F  +S ++   +I          N     + P   T   
Sbjct: 260 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM---------NHKERFQFPTQVTDVS 310

Query: 140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRI--NAENALK-HKYFAD 186
           E               +  DL+ + LI     R+  N     K H +F+ 
Sbjct: 311 E---------------NAKDLIRR-LICSREHRLGQNGIEDFKKHPFFSG 344

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 50.0 bits (120), Expect = 9e-08
 Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 18/72 (25%)

Query: 36  SNIVKVADFGLARAFG------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
              +K++D G++            +          W   PE +   +  +   D WS G 
Sbjct: 157 PPFIKLSDPGISITVLPKDILQERIP---------WV-PPECIENPKNLNLATDKWSFGT 206

Query: 90  IFAEIAT--RKP 99
              EI +   KP
Sbjct: 207 TLWEICSGGDKP 218

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 50.2 bits (120), Expect = 9e-08
 Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 25/160 (15%)

Query: 39  VKVADFGLARAFGVPVRIY--------THEVVTLWYRAPEVLLGS------QRYSCPVDV 84
             ++DFGL+        +           EV T+ Y APEVL G+      +     VD+
Sbjct: 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDM 218

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           +++G I+ EI  R         + +    F+         +  +  L   +   P++   
Sbjct: 219 YALGLIYWEIFMRCTDLFPGESVPEYQMAFQTE-VGNHPTFEDMQVLVSREKQRPKFPEA 277

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYC----PATRINAENALK 180
                    +   +  L++T+  C       R+ A+ A +
Sbjct: 278 W------KENSLAVRSLKETIEDCWDQDAEARLTAQXAEE 311

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 6/64 (9%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           N VK+ DFGL +        +  +        WY APE L    ++S   DVWS G +  
Sbjct: 151 NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLT-ESKFSVASDVWSFGVVLY 208

Query: 93  EIAT 96
           E+ T
Sbjct: 209 ELFT 212

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 6/64 (9%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           N VK+ DFGL +        Y  +        WY APE L    ++S   DVWS G +  
Sbjct: 182 NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLT-ESKFSVASDVWSFGVVLY 239

Query: 93  EIAT 96
           E+ T
Sbjct: 240 ELFT 243

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 8/64 (12%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           ++VKVADFGL+R   +    YT          W  APE L    ++S   DVW+ G +  
Sbjct: 355 HLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWT-APESLA-YNKFSIKSDVWAFGVLLW 410

Query: 93  EIAT 96
           EIAT
Sbjct: 411 EIAT 414

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
            + KVADFGLAR   +    YT          W  APE  L   R++   DVWS G +  
Sbjct: 317 LVCKVADFGLARL--IEDNEYTARQGAKFPIKWT-APEAAL-YGRFTIKSDVWSFGILLT 372

Query: 93  EIAT 96
           E+ T
Sbjct: 373 ELTT 376

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 6/64 (9%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
             VK+ADFGLA+   +    Y           WY APE L     +S   DVWS G +  
Sbjct: 164 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLS-DNIFSRQSDVWSFGVVLY 221

Query: 93  EIAT 96
           E+ T
Sbjct: 222 ELFT 225

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           ++VK+ DFGL RA       Y  +        W  APE L  ++ +S   D W  G    
Sbjct: 158 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-APESLK-TRTFSHASDTWMFGVTLW 215

Query: 93  EIAT--RKP 99
           E+ T  ++P
Sbjct: 216 EMFTYGQEP 224

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 48.7 bits (115), Expect = 3e-07
 Identities = 22/159 (13%), Positives = 48/159 (30%), Gaps = 30/159 (18%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K+++ K+      ++  +P       ++               Y+          +F ++
Sbjct: 197 KTSLKKLHYTLNGKSSTIPSCGLQVSIID--------------YTLSRLERDGIVVFCDV 242

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK---------LPDYKTTFPEWSNFC 145
           +  + LF GD   D  F I+R++     + W              L D       +   C
Sbjct: 243 SMDEDLFTGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKC 300

Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
               +K + +   +     L +  AT +     L     
Sbjct: 301 NTPAMKQIKRKIQEFHRTMLNFSSATDL-----LCQHSL 334

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 11/88 (12%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           + VK+ DFGL +A       YT +        WY APE L+   ++    DVWS G    
Sbjct: 163 HQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWY-APECLM-QSKFYIASDVWSFGVTLH 220

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           E+ T       DS+   +    +++   
Sbjct: 221 ELLTY-----CDSDSSPMALFLKMIGPT 243

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 48.8 bits (116), Expect = 3e-07
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +  K++DFGL++A G     YT          WY APE +   +++S   DVWS G    
Sbjct: 473 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWY-APECIN-FRKFSSRSDVWSYGVTMW 530

Query: 93  EIAT--RKP 99
           E  +  +KP
Sbjct: 531 EALSYGQKP 539

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 48.4 bits (116), Expect = 4e-07
 Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 33/150 (22%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +K+ADFG+ +   +     T+    T  Y APE+LLG Q+Y+  VD WS G +  E+   
Sbjct: 157 IKIADFGMCKE-NMLGDAKTNTFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIG 214

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
           +  F G  E ++LF    +                     +P W           L+++ 
Sbjct: 215 QSPFHGQDE-EELFH--SIRMDN---------------PFYPRW-----------LEKEA 245

Query: 158 LDLLEKTLIYCPATRINAENALK-HKYFAD 186
            DLL K  +  P  R+     ++ H  F +
Sbjct: 246 KDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
              K+ADFGLAR   +    YT          W  APE +     ++   DVWS G +  
Sbjct: 146 LSCKIADFGLARL--IEDNEYTAREGAKFPIKWT-APEAIN-YGTFTIKSDVWSFGILLT 201

Query: 93  EIAT--RKP 99
           EI T  R P
Sbjct: 202 EIVTHGRIP 210

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 48.0 bits (114), Expect = 5e-07
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 33/185 (17%)

Query: 32  IKPKSNI-------VKVADFGLARAF-------GVPVRIYTHEVVTLWYRAPEVLLGSQR 77
           +K  S+I       V ++      +         V      + V  L + +PEVL  + +
Sbjct: 154 VKA-SHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQ 212

Query: 78  -YSCPVDVWSIGCIFAEIATRKP----------LF---QGDS----EIDQLFRIFRVLTT 119
            Y    D++S+G    E+A              L     G      +   +      ++ 
Sbjct: 213 GYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSP 272

Query: 120 PTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL 179
                  G+S      T  P   +     + +         +E+ L   P  R +A   L
Sbjct: 273 SRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLL 332

Query: 180 KHKYF 184
            H +F
Sbjct: 333 NHSFF 337

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 47.6 bits (114), Expect = 5e-07
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 8/69 (11%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +  K++DFGL++A       Y  +        WY APE +    ++S   DVWS G +  
Sbjct: 154 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECIN-YYKFSSKSDVWSFGVLMW 211

Query: 93  EIAT--RKP 99
           E  +  +KP
Sbjct: 212 EAFSYGQKP 220

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 47.6 bits (114), Expect = 5e-07
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 25/77 (32%)

Query: 37  NIVKVADFGLARAFG------------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
             VK+ DFGLA+  G            VP++         W  A E +L  + Y+   DV
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---------WM-ALESIL-HRIYTHQSDV 202

Query: 85  WSIGCIFAEIAT--RKP 99
           WS G    E+ T   KP
Sbjct: 203 WSYGVTVWELMTFGSKP 219

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 47.2 bits (113), Expect = 7e-07
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           +  K++DFGL++A G     YT          WY APE +   +++S   DVWS G    
Sbjct: 147 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWY-APECIN-FRKFSSRSDVWSYGVTMW 204

Query: 93  EIAT--RKP 99
           E  +  +KP
Sbjct: 205 EALSYGQKP 213

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 47.3 bits (113), Expect = 8e-07
 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
            +VK+ DFGLA+A       Y           WY APE L    ++    DVWS G    
Sbjct: 171 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLK-EYKFYYASDVWSFGVTLY 228

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTP 120
           E+ T       DS      +   ++   
Sbjct: 229 ELLTH-----CDSSQSPPTKFLELIGIA 251

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 10/70 (14%)

Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIF 91
           S + K+ADFGLAR   +    YT          W  APE +     ++   DVWS G + 
Sbjct: 320 SLVCKIADFGLARV--IEDNEYTAREGAKFPIKWT-APEAIN-FGSFTIKSDVWSFGILL 375

Query: 92  AEIAT--RKP 99
            EI T  R P
Sbjct: 376 MEIVTYGRIP 385

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 10/69 (14%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
             VKV+DFG+ R   V    Y   V T     W  APEV     +YS   DVW+ G +  
Sbjct: 141 LCVKVSDFGMTRY--VLDDQYVSSVGTKFPVKWS-APEVFHYF-KYSSKSDVWAFGILMW 196

Query: 93  EIAT--RKP 99
           E+ +  + P
Sbjct: 197 EVFSLGKMP 205

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 26/79 (32%)

Query: 36  SNIVKVADFGLARAFG-------------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           + + KV+DFGL+R                +P+R         W  APE +   ++++   
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR---------WT-APEAIS-YRKFTSAS 231

Query: 83  DVWSIGCIFAEIAT--RKP 99
           DVWS G +  E+ T   +P
Sbjct: 232 DVWSFGIVMWEVMTYGERP 250

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 34/159 (21%), Positives = 55/159 (34%), Gaps = 26/159 (16%)

Query: 39  VKVADFG----LARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           V++ADFG    LA    +         V T  + APEV+   + Y    D+WS G    E
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
           +AT    +    +   +  +   L        P +      K    ++      K  +  
Sbjct: 220 LATGAAPY---HKYPPMKVLMLTLQNDP----PSLETGVQDKEMLKKYG-----KSFR-- 265

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYF--ADKTDL 190
                 ++   L   P  R  A   L+HK+F  A   + 
Sbjct: 266 -----KMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEF 299

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 24/76 (31%)

Query: 37  NIVKVADFGLARAFG-----------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
             VK+ DFGL+R              +P++         W  +PE +   +R++   DVW
Sbjct: 150 ECVKLGDFGLSRYIEDEDYYKASVTRLPIK---------WM-SPESIN-FRRFTTASDVW 198

Query: 86  SIGCIFAEIAT--RKP 99
                  EI +  ++P
Sbjct: 199 MFAVCMWEILSFGKQP 214

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 26/78 (33%)

Query: 37  NIVKVADFGLARAFG-------------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
            + KV+DFGL+R                +P+R         W  APE +   + +S   D
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR---------WT-APEAIA-FRTFSSASD 236

Query: 84  VWSIGCIFAEIAT--RKP 99
           VWS G +  E+     +P
Sbjct: 237 VWSFGVVMWEVLAYGERP 254

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 12/88 (13%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLL---GSQRYSC 80
           +KP  N+       +K+ADFG          +     V T  Y +PEVL    G   Y  
Sbjct: 194 VKPD-NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGR 252

Query: 81  PVDVWSIGCIFAEIATRKPLFQGDSEID 108
             D WS+G    E+      F  DS + 
Sbjct: 253 ECDWWSVGVFLYEMLVGDTPFYADSLVG 280

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 20/72 (27%)

Query: 37  NIVKVADFGLAR-----AFG--VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
           N+ KV+DFGL +          +PV+         W  APE L   +++S   DVWS G 
Sbjct: 154 NVAKVSDFGLTKEASSTQDTGKLPVK---------WT-APEALR-EKKFSTKSDVWSFGI 202

Query: 90  IFAEIAT--RKP 99
           +  EI +  R P
Sbjct: 203 LLWEIYSFGRVP 214

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 25/80 (31%)

Query: 37  NIVKVADFGLARAFG-----------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           + VK+ DFGL+R              +P++         W  APE +   +R++   DVW
Sbjct: 153 DCVKLGDFGLSRYMEDSTYYKASKGKLPIK---------WM-APESIN-FRRFTSASDVW 201

Query: 86  SIGCIFAEIAT--RKPLFQG 103
             G    EI     KP FQG
Sbjct: 202 MFGVCMWEILMHGVKP-FQG 220

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 25/77 (32%)

Query: 37  NIVKVADFGLARAFG------------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           + V+VADFG+A                 P++         W  A E +    +Y+   DV
Sbjct: 152 SQVQVADFGVADLLPPDDKQLLYSEAKTPIK---------WM-ALESIH-FGKYTHQSDV 200

Query: 85  WSIGCIFAEIAT--RKP 99
           WS G    E+ T   +P
Sbjct: 201 WSYGVTVWELMTFGAEP 217

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 26/78 (33%)

Query: 37  NIVKVADFGLARAFG-------------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
            + KV+DFGL R                +P+R         W  +PE +   ++++   D
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR---------WT-SPEAIA-YRKFTSASD 232

Query: 84  VWSIGCIFAEIAT--RKP 99
           VWS G +  E+ +   +P
Sbjct: 233 VWSYGIVLWEVMSYGERP 250

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 38/155 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
            K+ADFG+ +  G+   + T     T  Y APE+L     Y   VD W++G +  E+   
Sbjct: 163 CKLADFGMCKE-GICNGVTTATFCGTPDYIAPEILQE-MLYGPAVDWWAMGVLLYEMLCG 220

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
              F+ ++E D LF    +L                    +P W           L +D 
Sbjct: 221 HAPFEAENE-DDLFE--AILNDE---------------VVYPTW-----------LHEDA 251

Query: 158 LDLLEKTLIYCPATRI-----NAENALK-HKYFAD 186
             +L+  +   P  R+       E+A+  H +F +
Sbjct: 252 TGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 10/69 (14%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
            ++KV+DFG+ R   V    YT    T     W  +PEV   S RYS   DVWS G +  
Sbjct: 141 QVIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWA-SPEVFSFS-RYSSKSDVWSFGVLMW 196

Query: 93  EIAT--RKP 99
           E+ +  + P
Sbjct: 197 EVFSEGKIP 205

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 12/64 (18%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           N+ KV+DFGL +         + +        W  APE L   +++S   DVWS G +  
Sbjct: 326 NVAKVSDFGLTKE------ASSTQDTGKLPVKWT-APEALR-EKKFSTKSDVWSFGILLW 377

Query: 93  EIAT 96
           EI +
Sbjct: 378 EIYS 381

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 23/74 (31%)

Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVD 83
              V VADFGL++       IY+ +     YR            A E L   + Y+   D
Sbjct: 183 DMTVCVADFGLSKK------IYSGDY----YRQGRIAKMPVKWIAIESLA-DRVYTSKSD 231

Query: 84  VWSIGCIFAEIATR 97
           VW+ G    EIATR
Sbjct: 232 VWAFGVTMWEIATR 245

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 23/74 (31%)

Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVD 83
              V VADFGL+R       IY+ +     YR            A E L     Y+   D
Sbjct: 173 DMTVCVADFGLSRK------IYSGDY----YRQGCASKLPVKWLALESLA-DNLYTVHSD 221

Query: 84  VWSIGCIFAEIATR 97
           VW+ G    EI TR
Sbjct: 222 VWAFGVTMWEIMTR 235

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 25/77 (32%)

Query: 37  NIVKVADFGLARAFG------------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
             VK+ DFGLA+  G            VP++         W  A E +L  + Y+   DV
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---------WM-ALESIL-HRIYTHQSDV 202

Query: 85  WSIGCIFAEIAT--RKP 99
           WS G    E+ T   KP
Sbjct: 203 WSYGVTVWELMTFGSKP 219

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 10/69 (14%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           ++VKVADFGL+R   +    YT          W  APE L    ++S   DVW+ G +  
Sbjct: 148 HLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWT-APESLA-YNKFSIKSDVWAFGVLLW 203

Query: 93  EIAT--RKP 99
           EIAT    P
Sbjct: 204 EIATYGMSP 212

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 44.9 bits (107), Expect = 4e-06
 Identities = 34/154 (22%), Positives = 53/154 (34%), Gaps = 37/154 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +K+ DFGL +  G+           T  Y APEVL     Y   VD W +G +  E+   
Sbjct: 144 IKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCG 201

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
           +  F      ++LF    +L                    FP             L  + 
Sbjct: 202 RLPFYNQDH-ERLFE--LILMEEIR---------------FPRT-----------LSPEA 232

Query: 158 LDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
             LL   L   P  R+     +A+  ++H++F  
Sbjct: 233 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 45.4 bits (107), Expect = 5e-06
 Identities = 29/154 (18%), Positives = 61/154 (39%), Gaps = 37/154 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +K+ADFG+ +   +   + T     T  Y APE++   Q Y   VD W+ G +  E+   
Sbjct: 481 IKIADFGMCKE-NIWDGVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAG 538

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
           +  F+G+ E D+LF+                  + ++   +P+            + ++ 
Sbjct: 539 QAPFEGEDE-DELFQ-----------------SIMEHNVAYPKS-----------MSKEA 569

Query: 158 LDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
           + + +  +   P  R+        +  +H +F  
Sbjct: 570 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 45.1 bits (107), Expect = 5e-06
 Identities = 35/154 (22%), Positives = 54/154 (35%), Gaps = 37/154 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +K+ DFGL +  G+           T  Y APEVL     Y   VD W +G +  E+   
Sbjct: 288 IKITDFGLCKE-GIKDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCG 345

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
           +  F      ++LF    +L                    FP             L  + 
Sbjct: 346 RLPFYNQDH-EKLFE--LILMEE---------------IRFPRT-----------LGPEA 376

Query: 158 LDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
             LL   L   P  R+     +A+  ++H++FA 
Sbjct: 377 KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 44.9 bits (107), Expect = 5e-06
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 23/73 (31%)

Query: 36  SNIVKVADFGLAR------------AFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
            N++K++DFG++R               VPV+         W  APE L    RYS   D
Sbjct: 249 KNVLKISDFGMSREEADGVYAASGGLRQVPVK---------WT-APEALN-YGRYSSESD 297

Query: 84  VWSIGCIFAEIAT 96
           VWS G +  E  +
Sbjct: 298 VWSFGILLWETFS 310

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 44.5 bits (106), Expect = 5e-06
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 10/69 (14%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTL----WYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
            +VKV+DFGL+R   V    YT  V +     W   PEVL+ S ++S   D+W+ G +  
Sbjct: 157 GVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWS-PPEVLMYS-KFSSKSDIWAFGVLMW 212

Query: 93  EIAT--RKP 99
           EI +  + P
Sbjct: 213 EIYSLGKMP 221

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 44.5 bits (106), Expect = 6e-06
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 17/81 (20%)

Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTH---EVV-TLWYRAPEVLLGSQRYSC 80
           IK  +NI+       K++DFGLARA        T     +V T  Y APE L G    + 
Sbjct: 159 IKS-ANILLDEAFTAKISDFGLARAS--EKFAQTVMTSRIVGTTAYMAPEALRG--EITP 213

Query: 81  PVDVWSIGCIFAEIAT-RKPL 100
             D++S G +  EI T    +
Sbjct: 214 KSDIYSFGVVLLEIITGLPAV 234

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
            + K+ DFG+AR       IY       +YR             PE  +    ++   D 
Sbjct: 180 RVAKIGDFGMARD------IYRAS----YYRKGGCAMLPVKWMPPEAFM-EGIFTSKTDT 228

Query: 85  WSIGCIFAEIAT 96
           WS G +  EI +
Sbjct: 229 WSFGVLLWEIFS 240

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 43/153 (28%), Positives = 61/153 (39%), Gaps = 38/153 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           ++V DFG A+   V  R +T    T    APE++L S+ Y+  VD W++G +  E+A   
Sbjct: 180 IQVTDFGFAKR--VKGRTWTL-CGTPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P F  D  I Q++                  K+   K  FP            +   D  
Sbjct: 236 PPFFADQPI-QIYE-----------------KIVSGKVRFP-----------SHFSSDLK 266

Query: 159 DLLEKTLIYCPATRI----NAENALK-HKYFAD 186
           DLL   L      R     N  N +K HK+FA 
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 44.8 bits (106), Expect = 8e-06
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 25/81 (30%)

Query: 36  SNIVKVADFGLARAFG-----------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           ++ VK+ DFGL+R              +P++         W  APE +   +R++   DV
Sbjct: 527 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIK---------WM-APESIN-FRRFTSASDV 575

Query: 85  WSIGCIFAEIAT--RKPLFQG 103
           W  G    EI     KP FQG
Sbjct: 576 WMFGVCMWEILMHGVKP-FQG 595

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 44.2 bits (105), Expect = 8e-06
 Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 19/73 (26%)

Query: 36  SNIVKVADFGLARAFGVPVRIYTHEVVTL-----------WYRAPEVLLGSQRYSCPVDV 84
           S  VKVADFGLAR       I   E  ++           W  A E L  + R++   DV
Sbjct: 160 SFTVKVADFGLAR------DILDREYYSVQQHRHARLPVKWT-ALESLQ-TYRFTTKSDV 211

Query: 85  WSIGCIFAEIATR 97
           WS G +  E+ TR
Sbjct: 212 WSFGVLLWELLTR 224

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 44.2 bits (105), Expect = 8e-06
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
           N++K+ADFGLAR       I   +    +Y+            APE L   + Y+   DV
Sbjct: 194 NVMKIADFGLAR------DINNID----YYKKTTNGRLPVKWMAPEALF-DRVYTHQSDV 242

Query: 85  WSIGCIFAEIAT 96
           WS G +  EI T
Sbjct: 243 WSFGVLMWEIFT 254

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 44.2 bits (105), Expect = 9e-06
 Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 32/155 (20%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQR-YSCPVDVWSIGCIFAEIAT 96
           V + DFGL++ F        ++   T+ Y AP+++ G    +   VD WS+G +  E+ T
Sbjct: 198 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
               F  D E +    I R +                 +  +P+            +   
Sbjct: 258 GASPFTVDGEKNSQAEISRRILKS--------------EPPYPQE-----------MSAL 292

Query: 157 GLDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
             DL+++ L+  P  R+     +A+   +H +F  
Sbjct: 293 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 44.3 bits (105), Expect = 9e-06
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
           N++K+ADFGLAR       I+  +    +Y+            APE L   + Y+   DV
Sbjct: 228 NVMKIADFGLAR------DIHHID----YYKKTTNGRLPVKWMAPEALF-DRIYTHQSDV 276

Query: 85  WSIGCIFAEIAT 96
           WS G +  EI T
Sbjct: 277 WSFGVLLWEIFT 288

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
           N++K+ADFGLAR       I   +     Y+            APE L   + Y+   DV
Sbjct: 240 NVMKIADFGLAR------DINNIDY----YKKTTNGRLPVKWMAPEALF-DRVYTHQSDV 288

Query: 85  WSIGCIFAEIAT 96
           WS G +  EI T
Sbjct: 289 WSFGVLMWEIFT 300

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
            + K+ DFG+AR       IY       +YR             PE  +    ++   D 
Sbjct: 221 RVAKIGDFGMARD------IYRAG----YYRKGGCAMLPVKWMPPEAFM-EGIFTSKTDT 269

Query: 85  WSIGCIFAEIAT 96
           WS G +  EI +
Sbjct: 270 WSFGVLLWEIFS 281

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 37/154 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +K+ADFG+ +   +   + T     T  Y APE++   Q Y   VD W+ G +  E+   
Sbjct: 160 IKIADFGMCKE-NIWDGVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAG 217

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
           +  F+G+ E D+LF+   ++                    +P+            + ++ 
Sbjct: 218 QAPFEGEDE-DELFQ--SIMEHNVA---------------YPKS-----------MSKEA 248

Query: 158 LDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
           + + +  +   P  R+        +  +H +F  
Sbjct: 249 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 46/157 (29%)

Query: 39  VKVADFGLARAFGVPVRIY----THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           +K+ DFG A+   VP   Y    T +     Y APEV+  ++ Y+  +D WS G +  E+
Sbjct: 145 IKITDFGFAKY--VPDVTYTLCGTPD-----YIAPEVVS-TKPYNKSIDWWSFGILIYEM 196

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
                 F   +   + +                  K+ + +  FP +            +
Sbjct: 197 LAGYTPFYDSNT-MKTYE-----------------KILNAELRFPPF-----------FN 227

Query: 155 QDGLDLLEKTLIYCPATRI----NAENALK-HKYFAD 186
           +D  DLL + +    + R+    N    +K H +F +
Sbjct: 228 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 37  NIVKVADFGLARAF--GVPVRIYTHEVVTL---WYRAPEVLLGSQRYSCPVDVWSIGCIF 91
             VKVADFGLAR         ++      L   W  A E L  +Q+++   DVWS G + 
Sbjct: 165 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM-ALESLQ-TQKFTTKSDVWSFGVLL 222

Query: 92  AEIATR 97
            E+ TR
Sbjct: 223 WELMTR 228

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
            I K+ DFGLAR       I         Y             APE +  +  Y+   DV
Sbjct: 182 RITKICDFGLAR------DIKNDSN----YVVKGNARLPVKWMAPESIF-NCVYTFESDV 230

Query: 85  WSIGCIFAEIAT 96
           WS G    E+ +
Sbjct: 231 WSYGIFLWELFS 242

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 23/73 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
             VK+ DFG+ R       IY  +     YR            +PE L     ++   DV
Sbjct: 175 FTVKIGDFGMTR------DIYETDY----YRKGGKGLLPVRWMSPESLK-DGVFTTYSDV 223

Query: 85  WSIGCIFAEIATR 97
           WS G +  EIAT 
Sbjct: 224 WSFGVVLWEIATL 236

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
           N+VK+ DFGLAR       IY        Y             APE +   + Y+   DV
Sbjct: 185 NVVKICDFGLAR------DIYKDPD----YVRKGDARLPLKWMAPETIF-DRVYTIQSDV 233

Query: 85  WSIGCIFAEIAT 96
           WS G +  EI +
Sbjct: 234 WSFGVLLWEIFS 245

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
             +K++DFGL+R       +Y  +     Y             A E L     Y+   DV
Sbjct: 187 RKMKISDFGLSR------DVYEEDS----YVKRSQGRIPVKWMAIESLF-DHIYTTQSDV 235

Query: 85  WSIGCIFAEIAT 96
           WS G +  EI T
Sbjct: 236 WSFGVLLWEIVT 247

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
            +VK+ DFG++R       +Y+ +     YR             PE ++  ++++   DV
Sbjct: 170 LLVKIGDFGMSRD------VYSTDY----YRVGGHTMLPIRWMPPESIM-YRKFTTESDV 218

Query: 85  WSIGCIFAEIAT 96
           WS G I  EI T
Sbjct: 219 WSFGVILWEIFT 230

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 7/67 (10%)

Query: 36  SNIVKVADFGLARAF--GVPVRIYTHEVVTL---WYRAPEVLLGSQRYSCPVDVWSIGCI 90
              VKVADFGLAR         ++      L   W  A E L  +Q+++   DVWS G +
Sbjct: 228 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM-ALESLQ-TQKFTTKSDVWSFGVL 285

Query: 91  FAEIATR 97
             E+ TR
Sbjct: 286 LWELMTR 292

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 36/153 (23%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           + + DFGL +   +     T     T  Y APEVL   Q Y   VD W +G +  E+   
Sbjct: 178 IVLTDFGLCKE-NIEHNSTTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYG 235

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
            P F   +   +++    +L  P +                              +    
Sbjct: 236 LPPFYSRNT-AEMYD--NILNKPLQ---------------LKPN-----------ITNSA 266

Query: 158 LDLLEKTLIYCPATRI----NAENALKHKYFAD 186
             LLE  L      R+    +      H +F+ 
Sbjct: 267 RHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 23/78 (29%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRY 78
            +  + N+VK+ DFGLAR       IY        Y             APE +   + Y
Sbjct: 224 ILLSEKNVVKICDFGLAR------DIYKDPD----YVRKGDARLPLKWMAPETIF-DRVY 272

Query: 79  SCPVDVWSIGCIFAEIAT 96
           +   DVWS G +  EI +
Sbjct: 273 TIQSDVWSFGVLLWEIFS 290

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
           ++ K+ DFGLAR       I         Y             APE +     Y+   DV
Sbjct: 201 HVAKIGDFGLAR------DIMNDS----NYIVKGNARLPVKWMAPESIF-DCVYTVQSDV 249

Query: 85  WSIGCIFAEIAT 96
           WS G +  EI +
Sbjct: 250 WSYGILLWEIFS 261

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 42.5 bits (101), Expect = 3e-05
 Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 37/154 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +K+ DFGL++   +      +    T+ Y APEV+   + ++   D WS G +  E+ T 
Sbjct: 165 IKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTG 222

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
              FQG     +      +L                 K   P++           L  + 
Sbjct: 223 TLPFQGKDR-KETMT--MILKA---------------KLGMPQF-----------LSPEA 253

Query: 158 LDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
             LL       PA R+       E   +H +F+ 
Sbjct: 254 QSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
            +VK+ DFGLAR       I +       Y             APE L     Y+   DV
Sbjct: 209 KVVKICDFGLAR------DIMSDSN----YVVRGNARLPVKWMAPESLF-EGIYTIKSDV 257

Query: 85  WSIGCIFAEIAT 96
           WS G +  EI +
Sbjct: 258 WSYGILLWEIFS 269

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 42.1 bits (100), Expect = 4e-05
 Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 37/154 (24%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           VK+ DFGL +   +     TH    T+ Y APE+L+    ++  VD WS+G +  ++ T 
Sbjct: 160 VKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTG 217

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
            P F G++   +     ++L                 K   P +           L Q+ 
Sbjct: 218 APPFTGENR-KKTID--KILKC---------------KLNLPPY-----------LTQEA 248

Query: 158 LDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
            DLL+K L    A+R+     +A     H +F  
Sbjct: 249 RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 42.3 bits (100), Expect = 4e-05
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
            +VK+ DFG++R       IY+ +     YR             PE +L  ++++   DV
Sbjct: 195 LVVKIGDFGMSR------DIYSTDY----YRVGGRTMLPIRWMPPESIL-YRKFTTESDV 243

Query: 85  WSIGCIFAEIAT 96
           WS G +  EI T
Sbjct: 244 WSFGVVLWEIFT 255

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 42.3 bits (100), Expect = 4e-05
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
            +VK+ADFGL+R       IY+ +     Y+             PE +    RY+   DV
Sbjct: 211 MVVKIADFGLSR------NIYSADY----YKADGNDAIPIRWMPPESIF-YNRYTTESDV 259

Query: 85  WSIGCIFAEIAT 96
           W+ G +  EI +
Sbjct: 260 WAYGVVLWEIFS 271

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 41.8 bits (99), Expect = 5e-05
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 23/72 (31%)

Query: 37  NIVKVADFGLARAFGVPVRIYTHEVVTLWYR------------APEVLLGSQRYSCPVDV 84
             VK++D GL R       +Y  +     Y+            APE ++   ++S   D+
Sbjct: 165 LNVKISDLGLFRE------VYAADY----YKLLGNSLLPIRWMAPEAIM-YGKFSIDSDI 213

Query: 85  WSIGCIFAEIAT 96
           WS G +  E+ +
Sbjct: 214 WSYGVVLWEVFS 225

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 41.6 bits (98), Expect = 7e-05
 Identities = 39/164 (23%), Positives = 59/164 (35%), Gaps = 43/164 (26%)

Query: 39  VKVADFG----LARAFGVPVRIYTHEVVTLWYRAPEVLLGSQR--YSCPVDVWSIGCIFA 92
           VK+ DFG    +A A           V T ++ APEV+L      Y   VDVWS+G I  
Sbjct: 193 VKLGDFGSASIMAPANSF--------VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITC 243

Query: 93  -EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
            E+A RKP     + +  L+ I         +      +   +   F  + + CL K   
Sbjct: 244 IELAERKPPLFNMNAMSALYHI------AQNE--SPALQSGHWSEYFRNFVDSCLQKI-- 293

Query: 152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE 195
                            P  R  +E  LKH++   +       +
Sbjct: 294 -----------------PQDRPTSEVLLKHRFVLRERPPTVIMD 320

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 41.1 bits (97), Expect = 9e-05
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 20/69 (28%)

Query: 37  NIVKVADFGLARAFGV---------PVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSI 87
            + K+ADFGL+R   V         PVR         W  A E L     Y+   DVWS 
Sbjct: 179 YVAKIADFGLSRGQEVYVKKTMGRLPVR---------WM-AIESLN-YSVYTTNSDVWSY 227

Query: 88  GCIFAEIAT 96
           G +  EI +
Sbjct: 228 GVLLWEIVS 236

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 39/154 (25%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFA-EIAT 96
           VK+ADFG+A       +I  +  V T ++ APEV+  S  Y    D+WS+G I A E+A 
Sbjct: 158 VKLADFGVA-GQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLG-ITAIELAR 214

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPT---EDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
            +P     SE+  +  +F +        E N+   SK         E+   CL+K     
Sbjct: 215 GEPPH---SELHPMKVLFLIPKNNPPTLEGNY---SK------PLKEFVEACLNKE---- 258

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADK 187
                          P+ R  A+  LKHK+    
Sbjct: 259 ---------------PSFRPTAKELLKHKFILRN 277

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 12/116 (10%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFA-EIAT 96
           VK+ DFG   A   P +     +V T ++ APEV+     Y   VD+WS+G I A E+  
Sbjct: 155 VKLTDFGFC-AQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLG-IMAIEMIE 211

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
            +P +  ++ +  L+ I     TP   N   +S        F ++ N CL+  V+ 
Sbjct: 212 GEPPYLNENPLRALYLI-ATNGTPELQNPEKLSA------IFRDFLNRCLEMDVEK 260

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 31/148 (20%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFA-EIAT 96
            K+ADFG+A           + V+ T ++ APEV+     Y+C  D+WS+G I A E+A 
Sbjct: 164 AKLADFGVA-GQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YNCVADIWSLG-ITAIEMAE 220

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
            KP +     +  +F I      PT    P   K   +   F ++   CL K        
Sbjct: 221 GKPPYADIHPMRAIFMI------PTNPP-PTFRKPELWSDNFTDFVKQCLVKS------- 266

Query: 157 GLDLLEKTLIYCPATRINAENALKHKYF 184
                       P  R  A   L+H + 
Sbjct: 267 ------------PEQRATATQLLQHPFV 282

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 45/163 (27%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           +K+ D+G+ +  G+     T     T  Y APE+L G + Y   VD W++G +  E+   
Sbjct: 149 IKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAG 206

Query: 98  KPLFQGDSE--------IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
           +  F              D LF+                  + + +   P          
Sbjct: 207 RSPFDIVGSSDNPDQNTEDYLFQ-----------------VILEKQIRIPRS-------- 241

Query: 150 VKNLDQDGLDLLEKTLIYCPATRI-----NAENALK-HKYFAD 186
              L      +L+  L   P  R+          ++ H +F +
Sbjct: 242 ---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	197
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.98
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.98
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.98
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.98
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.98
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.97
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.96
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.96
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.96
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.96
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.96
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.96
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.96
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.96
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.96
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.96
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.96
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.96
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.96
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.96
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.96
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.96
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.96
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.96
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.96
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.96
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.96
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.96
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.96
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.96
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.96
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.95
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.95
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.95
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.95
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.95
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.95
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.95
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.95
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.95
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.95
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.95
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.95
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.95
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.95
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.95
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.95
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.95
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.95
3bhy_A	283	Death-associated protein kinase 3; death associate	99.95
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.95
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.95
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.95
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.95
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.95
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.95
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.95
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.94
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.94
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.94
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.94
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.94
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.94
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.94
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.94
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.94
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.93
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.93
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.93
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.93
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.93
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.93
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.93
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.93
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.92
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.92
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.92
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.92
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.92
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.92
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.92
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.92
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.92
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.92
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.92
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.92
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.92
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.92
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.92
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.92
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.92
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.92
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.92
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.92
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.92
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.92
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.91
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.91
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.91
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.91
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.91
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.91
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.91
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.91
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.91
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.91
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.91
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.91
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.91
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.91
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.91
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.91
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.91
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.91
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.91
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.91
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.91
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.91
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.91
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.91
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.91
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.91
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.91
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.91
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.9
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.9
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.9
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.9
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.9
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.9
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.9
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.9
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.9
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.9
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.9
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.9
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.9
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.9
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.9
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.89
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.89
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.89
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.89
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.89
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.89
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.89
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.88
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.88
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.88
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.88
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.87
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.85
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.85
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.85
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.83
3uqc_A	286	Probable conserved transmembrane protein; structur	99.66
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.29
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.73
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.61
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	97.18
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	95.28

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=8.5e-39  Score=239.33  Aligned_cols=159  Identities=25%  Similarity=0.361  Sum_probs=133.2

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++.+++.++.||++||+||         |||      +++.+||+|||+|+.+..........+||+.|||||++.
T Consensus       164 ~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~  243 (346)
T 4fih_A          164 HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELIS  243 (346)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHC
Confidence            35799999999999999999999         888      557899999999998766555556679999999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|+|++|..||.+.+..+.+..+........                          .....+
T Consensus       244 ~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~--------------------------~~~~~~  296 (346)
T 4fih_A          244 RLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--------------------------KNLHKV  296 (346)
T ss_dssp             TCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC--------------------------SCGGGS
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCC--------------------------CccccC
Confidence            644 89999999999999999999999999988888777654221100                          111347


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhh
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA  194 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~  194 (197)
                      |.++++||.+||+.||++|||++|+++||||++...+..+.
T Consensus       297 s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p~~l~  337 (346)
T 4fih_A          297 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV  337 (346)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGTG
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCCcccC
Confidence            89999999999999999999999999999999877665544

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.3e-39  Score=244.61  Aligned_cols=182  Identities=31%  Similarity=0.552  Sum_probs=143.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC----ccccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP----VRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~----~~~~~~~~~~~~y~aPE   70 (197)
                      .++++.+++.+++||+.||+||         |||      .++.+||+|||+|+.+...    .......+||+.|||||
T Consensus       153 ~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APE  232 (398)
T 4b99_A          153 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE  232 (398)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHH
Confidence            5699999999999999999999         888      4577899999999876432    22334568999999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCC--CCCCCcccchhhhhh
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD--YKTTFPEWSNFCLDK  148 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  148 (197)
                      ++.+...++.++||||+||++|+|++|+.||.+.+..+.+..+....+.++...+........  +...++.........
T Consensus       233 v~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (398)
T 4b99_A          233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWET  312 (398)
T ss_dssp             HHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHH
T ss_pred             HhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHH
Confidence            998866689999999999999999999999999999999999999999887665544322110  011122222233444


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ..+.++.++++||.+||..||++|||++|+|+||||++..+++
T Consensus       313 ~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p~  355 (398)
T 4b99_A          313 VYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD  355 (398)
T ss_dssp             HSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCGG
T ss_pred             hCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCCCc
Confidence            5577899999999999999999999999999999999876654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1e-37  Score=238.82  Aligned_cols=159  Identities=25%  Similarity=0.361  Sum_probs=133.4

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++.+++.++.||++||+||         |||      .++.+||+|||+|+.+..........+||+.|||||++.
T Consensus       241 ~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~  320 (423)
T 4fie_A          241 HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELIS  320 (423)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHT
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHC
Confidence            45799999999999999999999         888      457789999999998766555556779999999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. |+.++||||+||++|+|++|..||.+.+..+.+..+........                          .....+
T Consensus       321 ~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~--------------------------~~~~~~  373 (423)
T 4fie_A          321 RLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--------------------------KNLHKV  373 (423)
T ss_dssp             TCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--------------------------SCTTSS
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCC--------------------------cccccC
Confidence            644 89999999999999999999999999988888877754321100                          111457


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhh
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA  194 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~  194 (197)
                      |.++++||.+||..||++|||++|+|+||||+....+..+.
T Consensus       374 s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p~~l~  414 (423)
T 4fie_A          374 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV  414 (423)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGTG
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCCCcccc
Confidence            89999999999999999999999999999999877665554

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=8.2e-38  Score=230.87  Aligned_cols=154  Identities=21%  Similarity=0.331  Sum_probs=128.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC--ccccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~--~~~~~~~~~~~~y~aPE~   71 (197)
                      ...++|.+++.++.||+.||+||         |||      +++.+||+|||+|+.+...  .......+||+.|||||+
T Consensus       126 ~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEv  205 (311)
T 4aw0_A          126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL  205 (311)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHH
Confidence            35799999999999999999999         888      5578899999999877532  223445689999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++||||+||++|+|++|+.||.+.+......++...-...                             ..
T Consensus       206 l~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~-----------------------------p~  255 (311)
T 4aw0_A          206 LTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF-----------------------------PE  255 (311)
T ss_dssp             HHHSC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-----------------------------CT
T ss_pred             HcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-----------------------------Cc
Confidence            98744 8999999999999999999999999998888888876531111                             13


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHH------HhcCcccCCCCCcchh
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAEN------ALKHKYFADKTDLPKF  193 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~e------ll~hp~~~~~~~~~~~  193 (197)
                      .+|.++++||.+||+.||++|||++|      +++||||+++ +++.+
T Consensus       256 ~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i-dw~~l  302 (311)
T 4aw0_A          256 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV-TWENL  302 (311)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC-CCTTG
T ss_pred             ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC-CHHHh
Confidence            46789999999999999999999988      6899999976 44444

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=9e-38  Score=230.46  Aligned_cols=153  Identities=24%  Similarity=0.288  Sum_probs=125.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++.+++.++.||+.||+||         |||      +++.+||+|||+|+............+||+.|||||++.
T Consensus       120 ~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~  199 (304)
T 3ubd_A          120 EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN  199 (304)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhc
Confidence            35799999999999999999999         888      557899999999987655444455678999999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|+|++|+.||.+.+..+....+.+.....                             +..+
T Consensus       200 ~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~-----------------------------p~~~  249 (304)
T 3ubd_A          200 RRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM-----------------------------PQFL  249 (304)
T ss_dssp             TSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------------------------CTTS
T ss_pred             cCC-CCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCC-----------------------------CCcC
Confidence            754 8999999999999999999999999998888887776521111                             1347


Q ss_pred             CHhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCCCCcch
Q psy6390         154 DQDGLDLLEKTLIYCPATRIN-----AENALKHKYFADKTDLPK  192 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~~~~~~  192 (197)
                      |.++.+||.+||+.||++|||     ++|+++||||+++ +++.
T Consensus       250 s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i-dw~~  292 (304)
T 3ubd_A          250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI-DWNK  292 (304)
T ss_dssp             CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC-CHHH
T ss_pred             CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC-CHHH
Confidence            889999999999999999998     5799999999976 4443

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.3e-37  Score=226.78  Aligned_cols=148  Identities=26%  Similarity=0.369  Sum_probs=115.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++.+++.++.||++||+||         |||      +++.+||+|||+|+...... .....+||+.|||||++.
T Consensus       106 ~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-~~~~~~GT~~Y~APE~~~  184 (275)
T 3hyh_A          106 RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVIS  184 (275)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----------------CTTSCHHHHS
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-ccCCeeECcccCChhhhc
Confidence            35799999999999999999999         888      45778999999998765432 234568999999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +...++.++||||+||++|+|++|+.||.+.+.......+.......                             +..+
T Consensus       185 ~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~-----------------------------p~~~  235 (275)
T 3hyh_A          185 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----------------------------PKFL  235 (275)
T ss_dssp             SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-----------------------------CTTS
T ss_pred             CCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC-----------------------------CCCC
Confidence            76645789999999999999999999999988777777665421111                             1336


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      |.++++||.+||+.||++|||++|+++||||+.
T Consensus       236 s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          236 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence            889999999999999999999999999999974

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=8.1e-38  Score=234.36  Aligned_cols=148  Identities=23%  Similarity=0.355  Sum_probs=126.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .++|.+++.++.||+.||+||         |||      +++.+||+|||+|+............+||+.|||||++.+.
T Consensus       121 ~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~  200 (350)
T 4b9d_A          121 LFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENK  200 (350)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCC
Confidence            479999999999999999999         888      55788999999998776544444556899999999999874


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . ++.++||||+||++|+|++|+.||.+.+..+.+.++......+                            ....+|.
T Consensus       201 ~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~----------------------------~~~~~s~  251 (350)
T 4b9d_A          201 P-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP----------------------------VSLHYSY  251 (350)
T ss_dssp             C-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC----------------------------CCTTSCH
T ss_pred             C-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC----------------------------CCccCCH
Confidence            4 8999999999999999999999999999888888776532111                            1134788


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ++.+||.+||+.||++|||++|+++||||++.
T Consensus       252 ~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          252 DLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence            99999999999999999999999999999754

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.7e-36  Score=222.59  Aligned_cols=149  Identities=21%  Similarity=0.289  Sum_probs=117.6

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc-----------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC-----------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l-----------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ...+++..++.++.||++||+||           |||       +++.+||+|||+|+.....  .....+||+.|||||
T Consensus       123 ~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~--~~~~~~GTp~YmAPE  200 (290)
T 3fpq_A          123 FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPE  200 (290)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT--SBEESCSSCCCCCGG
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC--ccCCcccCccccCHH
Confidence            35799999999999999999999           777       3578999999999865432  234568999999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      ++.+ . ++.++||||+||++|+|++|+.||.+......+.........+                          ....
T Consensus       201 ~~~~-~-y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~--------------------------~~~~  252 (290)
T 3fpq_A          201 MYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--------------------------ASFD  252 (290)
T ss_dssp             GGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--------------------------GGGG
T ss_pred             HcCC-C-CCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC--------------------------CCCC
Confidence            8864 4 8999999999999999999999998766555544433211110                          0111


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ...+.++.+||.+||..||++|||++|+++||||++.
T Consensus       253 ~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence            3467889999999999999999999999999999864

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=5.2e-36  Score=226.84  Aligned_cols=178  Identities=25%  Similarity=0.362  Sum_probs=125.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC-------CcEEEeecCCccccCCCc-------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS-------NIVKVADFGLARAFGVPV-------------------   54 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-------~~vkl~Dfg~s~~~~~~~-------------------   54 (197)
                      +++++.+++.++.||++||+||         |||+|       +.+||+|||+|+......                   
T Consensus       112 ~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (361)
T 4f9c_A          112 NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQN  191 (361)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC------------
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccc
Confidence            4699999999999999999999         88843       678999999997653321                   


Q ss_pred             ---------cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCC-CCChHHHHHHHHhhcCCCCCCC
Q psy6390          55 ---------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQ-GDSEIDQLFRIFRVLTTPTEDN  124 (197)
Q Consensus        55 ---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  124 (197)
                               ......+||+.|||||++.+...++.++||||+||++|+|++|+.||. +.+..+.+..+....+.+....
T Consensus       192 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~  271 (361)
T 4f9c_A          192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQ  271 (361)
T ss_dssp             --------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHH
T ss_pred             cccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchh
Confidence                     112234799999999999876668999999999999999999999985 4567777887777665421100


Q ss_pred             C--------------CCCC------CCCCCCCCCccc-----chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         125 W--------------PGVS------KLPDYKTTFPEW-----SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       125 ~--------------~~~~------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                      +              +...      .........+..     ........+..+|.+++|||.+||..||++|+|++|+|
T Consensus       272 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL  351 (361)
T 4f9c_A          272 AAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEAL  351 (361)
T ss_dssp             HHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHH
T ss_pred             hhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHh
Confidence            0              0000      000000000000     01111223466899999999999999999999999999


Q ss_pred             cCcccCCC
Q psy6390         180 KHKYFADK  187 (197)
Q Consensus       180 ~hp~~~~~  187 (197)
                      +||||+++
T Consensus       352 ~Hp~f~~i  359 (361)
T 4f9c_A          352 LHPFFKDM  359 (361)
T ss_dssp             TSGGGTTC
T ss_pred             cCcccCCC
Confidence            99999976

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.4e-35  Score=219.24  Aligned_cols=154  Identities=16%  Similarity=0.120  Sum_probs=121.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCC-cEEEeecCCccccCCCcc-----ccccceeccceeC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSN-IVKVADFGLARAFGVPVR-----IYTHEVVTLWYRA   68 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~-~vkl~Dfg~s~~~~~~~~-----~~~~~~~~~~y~a   68 (197)
                      .++++.+++.++.||++||+||         |||      .++ .+||+|||+|+.......     .....+||+.|||
T Consensus       145 ~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmA  224 (336)
T 4g3f_A          145 GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMA  224 (336)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccC
Confidence            5699999999999999999999         888      334 699999999987654321     1223579999999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ||++.+.. ++.++||||+||++|+|++|+.||.+.+.......+......                          ...
T Consensus       225 PE~~~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~--------------------------~~~  277 (336)
T 4g3f_A          225 PEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPP--------------------------IRE  277 (336)
T ss_dssp             HHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCG--------------------------GGG
T ss_pred             HHHHCCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCC--------------------------chh
Confidence            99998744 899999999999999999999999887665555555431100                          112


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHH-------------hcCcccCCCCCc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENA-------------LKHKYFADKTDL  190 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~el-------------l~hp~~~~~~~~  190 (197)
                      ..+.++..+.++|.+||+.||++|||++|+             ++|||+.+..++
T Consensus       278 ~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~P  332 (336)
T 4g3f_A          278 IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEP  332 (336)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCC
T ss_pred             cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCC
Confidence            235688999999999999999999999997             679999877554

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.9e-34  Score=212.70  Aligned_cols=179  Identities=49%  Similarity=0.941  Sum_probs=143.8

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..++.++.|+++||+||         |||      .++.+||+|||.++.............+|+.|+|||++.
T Consensus        94 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~  173 (288)
T 1ob3_A           94 EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM  173 (288)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHT
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchhee
Confidence            35699999999999999999999         777      557789999999987654433344557899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +...++.++||||+||++|+|++|..||.+....+....+.+..+.+....++.....+.+...+..............+
T Consensus       174 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (288)
T 1ob3_A          174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGL  253 (288)
T ss_dssp             TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSC
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhc
Confidence            75558999999999999999999999999999999999999988888887777666655555444444333344455678


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      +..+.+||.+||..||++|||++|+++||||++.
T Consensus       254 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          254 DESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            9999999999999999999999999999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=4.9e-34  Score=210.78  Aligned_cols=181  Identities=48%  Similarity=0.800  Sum_probs=145.4

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..++.++.|+++||+||         |||      .++.+||+|||.++.............+|+.|+|||++.
T Consensus        95 ~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~  174 (292)
T 3o0g_A           95 NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF  174 (292)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHc
Confidence            35799999999999999999999         777      557789999999987765544455667899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCC-CCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPL-FQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +...++.++||||+||++++|++|..| |.+.+..+.+..+.+..+.+....|+.....+.+................+.
T Consensus       175 ~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (292)
T 3o0g_A          175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPK  254 (292)
T ss_dssp             TCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTT
T ss_pred             CCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccc
Confidence            766689999999999999999986655 6777788888999999998888877776655544332222222223334466


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ++..+.+||.+||+.||++|||++|+++||||++.+.
T Consensus       255 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~p  291 (292)
T 3o0g_A          255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC--
T ss_pred             cChHHHHHHHHHhccChhhCCCHHHHhcCcccccCCC
Confidence            8899999999999999999999999999999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.4e-34  Score=214.33  Aligned_cols=180  Identities=49%  Similarity=0.883  Sum_probs=143.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |||      .++.+||+|||.++.............+|+.|+|||++.+
T Consensus       114 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~  193 (311)
T 3niz_A          114 TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG  193 (311)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcC
Confidence            4599999999999999999999         777      4567899999999877654444455678999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC-CCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT-TFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  153 (197)
                      ...++.++||||+||++|++++|..||.+....+....+....+.+....++.....+.+.. ..............+..
T Consensus       194 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (311)
T 3niz_A          194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGF  273 (311)
T ss_dssp             CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTC
T ss_pred             CCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCccc
Confidence            56689999999999999999999999999988889999999888888777665544322211 11111222233445678


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      +.++.+||.+||+.||++|||++|+++||||++...
T Consensus       274 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          274 CQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             CHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence            899999999999999999999999999999998754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.8e-34  Score=228.98  Aligned_cols=155  Identities=21%  Similarity=0.320  Sum_probs=129.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCCC--------CcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPKS--------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~--------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ...+++.+++.++.||++||.||         |||+|        +.+||+|||+|+.+..... ....+||+.|||||+
T Consensus       249 ~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~-~~~~~GT~~y~APEv  327 (573)
T 3uto_A          249 HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTTGTAEFAAPEV  327 (573)
T ss_dssp             TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE-EEEECSSGGGCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc-eeeeEECccccCHHH
Confidence            34699999999999999999999         77733        6789999999998765433 345689999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++||||+||++|+|++|..||.+.+..+.+..+.......+.                         ..+.
T Consensus       328 ~~~~~-y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~  381 (573)
T 3uto_A          328 AEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD-------------------------SAFS  381 (573)
T ss_dssp             HTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCS-------------------------GGGT
T ss_pred             hCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCc-------------------------cccc
Confidence            98754 899999999999999999999999999988888887653222211                         1224


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      .+|.++++||.+||+.||++|||++|+|+||||+....+
T Consensus       382 ~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~  420 (573)
T 3uto_A          382 GISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP  420 (573)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCC
Confidence            578999999999999999999999999999999976543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.9e-33  Score=210.01  Aligned_cols=181  Identities=43%  Similarity=0.786  Sum_probs=145.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..++.++.|+++||+||         |||      .++.+||+|||.++.............+|+.|+|||++.+.
T Consensus       104 ~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  183 (317)
T 2pmi_A          104 GLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS  183 (317)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCC
Confidence            489999999999999999999         777      55778999999998765444444456789999999999875


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc-----hhhhhhcc
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS-----NFCLDKHV  150 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  150 (197)
                      ..++.++||||+||++|+|++|..||.+.+..+....+....+.+....|+.....+.+........     ........
T Consensus       184 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (317)
T 2pmi_A          184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTK  263 (317)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCS
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhccccc
Confidence            5689999999999999999999999999999999999998888888777776655544433322211     11122233


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ...+..+.+||.+||+.||++|||++|+++||||++.....
T Consensus       264 ~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  304 (317)
T 2pmi_A          264 EPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHA  304 (317)
T ss_dssp             SCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC--
T ss_pred             ccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchh
Confidence            46889999999999999999999999999999999776544

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.7e-33  Score=210.86  Aligned_cols=182  Identities=43%  Similarity=0.815  Sum_probs=138.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..++.++.|++.||+||         |||      .++.+||+|||.++.............+|+.|+|||++.
T Consensus        94 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~  173 (324)
T 3mtl_A           94 GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL  173 (324)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhc
Confidence            34599999999999999999999         777      456789999999987655444445567899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC-CCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK-TTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  152 (197)
                      +...++.++||||+||++|+|++|..||.+.+..+....+.+..+.+....|+.......+. ...+...........+.
T Consensus       174 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (324)
T 3mtl_A          174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPR  253 (324)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTT
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCC
Confidence            76668999999999999999999999999999999999999999998887776543321111 11111222222334467


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ++..+.+||.+||+.||++|||++|+++||||.+....
T Consensus       254 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          254 LDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             CCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence            88999999999999999999999999999999876543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.3e-33  Score=211.95  Aligned_cols=178  Identities=50%  Similarity=0.970  Sum_probs=140.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCCC-----------cEEEeecCCccccCCCccccccceeccceeCc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKSN-----------IVKVADFGLARAFGVPVRIYTHEVVTLWYRAP   69 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~-----------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aP   69 (197)
                      ..+++..++.++.||++||+||         |||+|.           .+||+|||.++.............+|+.|+||
T Consensus       127 ~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aP  206 (329)
T 3gbz_A          127 PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPP  206 (329)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCH
Confidence            3599999999999999999999         777443           37999999998765544444556789999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh-
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK-  148 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  148 (197)
                      |++.+...++.++||||+||++|++++|..||.+....+.+..+....+.+....++.....+.+....+......... 
T Consensus       207 E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (329)
T 3gbz_A          207 EILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRV  286 (329)
T ss_dssp             HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHH
T ss_pred             HHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhh
Confidence            9998766689999999999999999999999999999999999999999888888777666666555554443222222 


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ....++..+.+||.+||..||++|||++|+++||||++.
T Consensus       287 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          287 LGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             HGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             cccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence            223478999999999999999999999999999999976

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.9e-33  Score=222.87  Aligned_cols=148  Identities=20%  Similarity=0.269  Sum_probs=119.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...|++..++.|+.||+.||+||         |||      +++++||+|||+|+......  ....+||+.|||||++.
T Consensus       286 ~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~--~~t~~GTp~YmAPEvl~  363 (689)
T 3v5w_A          286 HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVGTHGYMAPEVLQ  363 (689)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC--CCSCCSCGGGCCHHHHS
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC--CCCccCCcCccCHHHHh
Confidence            35699999999999999999999         888      56889999999998765433  34568999999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh---HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      ....++.++|+||+||++|+|++|..||.+.+.   ......+.....                             ..+
T Consensus       364 ~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~-----------------------------~~p  414 (689)
T 3v5w_A          364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-----------------------------ELP  414 (689)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC-----------------------------CCC
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC-----------------------------CCC
Confidence            655589999999999999999999999976432   222233322100                             111


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+|.++++||.+||+.||++|++     ++||++||||+++
T Consensus       415 ~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence            447899999999999999999998     7999999999976

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.2e-32  Score=204.79  Aligned_cols=175  Identities=45%  Similarity=0.765  Sum_probs=139.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..++.++.|+++||+||         |||      +++.+||+|||.++....... .....+|+.|+|||++.+.
T Consensus       116 ~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~  194 (308)
T 3g33_A          116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTPVVVTLWYRAPEVLLQS  194 (308)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCC-SGGGGCCCSSCCHHHHHTS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcc-cCCccccccccCchHHcCC
Confidence            399999999999999999999         777      446789999999987654322 3345789999999999875


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . ++.++||||+||++|+|++|..||.+....+....+....+.++...|+.....+..  .++...........+.++.
T Consensus       195 ~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  271 (308)
T 3g33_A          195 T-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG--AFPPRGPRPVQSVVPEMEE  271 (308)
T ss_dssp             C-CCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGG--GSCCCCCCCHHHHSCSCCH
T ss_pred             C-CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcccc--ccCCCCCCcHHHhCccccH
Confidence            5 899999999999999999999999999999999999999888887777654433221  1222222233344567899


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .+.+||.+||+.||++|||++|+++||||++...
T Consensus       272 ~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~~  305 (308)
T 3g33_A          272 SGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG  305 (308)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSTTC-----
T ss_pred             HHHHHHHHHhcCCCccCCCHHHHhcCccccCCCC
Confidence            9999999999999999999999999999997644

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1e-32  Score=203.95  Aligned_cols=149  Identities=21%  Similarity=0.210  Sum_probs=111.3

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC--ccccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~--~~~~~~~~~~~~y~aPE~   71 (197)
                      ..++++.++..++.||++||+||         |||      +++.+||+|||+|+.....  .......+||+.|||||+
T Consensus       126 ~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~  205 (307)
T 3omv_A          126 ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV  205 (307)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHH
Confidence            35699999999999999999999         888      4467899999999876432  222345689999999999


Q ss_pred             hcC--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          72 LLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        72 ~~~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      +.+  ...++.++||||+||++|||++|+.||.+.+.......+.......+.                       ....
T Consensus       206 l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-----------------------~~~~  262 (307)
T 3omv_A          206 IRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-----------------------LSKL  262 (307)
T ss_dssp             HHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC-----------------------STTS
T ss_pred             hhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC-----------------------cccc
Confidence            964  234899999999999999999999999987766655544432111110                       0112


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...++..+.+|+.+||+.||++|||++|+++
T Consensus       263 ~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~  293 (307)
T 3omv_A          263 YKNCPKAMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred             cccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            2457889999999999999999999998643

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.2e-32  Score=211.00  Aligned_cols=183  Identities=35%  Similarity=0.642  Sum_probs=136.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC---------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP---------------------   53 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~---------------------   53 (197)
                      ..+++..+..++.|++.||+||         |||      .++.+||+|||+|+.....                     
T Consensus       104 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (388)
T 3oz6_A          104 NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD  183 (388)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccc
Confidence            4699999999999999999999         777      5577899999999865321                     


Q ss_pred             ccccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC--
Q psy6390          54 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL--  131 (197)
Q Consensus        54 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  131 (197)
                      .......+||+.|+|||++.+...++.++||||+||++++|++|..||.+.+..+.+..+...++.+....+......  
T Consensus       184 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  263 (388)
T 3oz6_A          184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFA  263 (388)
T ss_dssp             ------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSH
T ss_pred             cccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHH
Confidence            112234578999999999987566899999999999999999999999999999999999988887765433222110  


Q ss_pred             ---------------CCCCCCCcccchhhhh-hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         132 ---------------PDYKTTFPEWSNFCLD-KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       132 ---------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                                     ......++.+...... ......+..+.+||.+||..||++|||++|+++||||+...+..+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~~~  340 (388)
T 3oz6_A          264 KTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNE  340 (388)
T ss_dssp             HHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCGGG
T ss_pred             HHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCCcc
Confidence                           0111111111111111 112367899999999999999999999999999999987765543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-32  Score=206.24  Aligned_cols=179  Identities=44%  Similarity=0.836  Sum_probs=146.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |||      .++.+||+|||.++.............+|+.|+|||++.+
T Consensus       107 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~  186 (346)
T 1ua2_A          107 LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG  186 (346)
T ss_dssp             SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhC
Confidence            3589999999999999999999         777      5577899999999877554444455678999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...++.++||||+||++|+|++|..||.+....+.+..+....+.+....|+.....+.+.. +...............+
T Consensus       187 ~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  265 (346)
T 1ua2_A          187 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT-FKSFPGIPLHHIFSAAG  265 (346)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC-CCCCCCCCHHHHCTTCC
T ss_pred             CCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccc-ccccCCCChHHhhccCC
Confidence            55588999999999999999999999999999999999999888888887777665544321 11122222334456788


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+.+||.+||..||++|||++|+++||||++...
T Consensus       266 ~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          266 DDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  300 (346)
T ss_dssp             HHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCC
Confidence            99999999999999999999999999999986543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=4.3e-33  Score=205.87  Aligned_cols=147  Identities=26%  Similarity=0.334  Sum_probs=102.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc------------ccccceec
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR------------IYTHEVVT   63 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~------------~~~~~~~~   63 (197)
                      ..++..++.++.||++||+||         |||      .++.+||+|||+|+.......            .....+||
T Consensus       114 ~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT  193 (299)
T 4g31_A          114 ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGT  193 (299)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccC
Confidence            355667899999999999999         888      557899999999987644221            12345799


Q ss_pred             cceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccch
Q psy6390          64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN  143 (197)
Q Consensus        64 ~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (197)
                      +.|||||++.+.. ++.++||||+||++|+|++   ||.+..  +....+.......                 ++    
T Consensus       194 ~~YmAPE~~~~~~-y~~~~DiwSlGvilyell~---Pf~~~~--~~~~~~~~~~~~~-----------------~p----  246 (299)
T 4g31_A          194 KLYMSPEQIHGNS-YSHKVDIFSLGLILFELLY---PFSTQM--ERVRTLTDVRNLK-----------------FP----  246 (299)
T ss_dssp             CTTSCHHHHTTCC-CCTHHHHHHHHHHHHHHHS---CCSSHH--HHHHHHHHHHTTC-----------------CC----
T ss_pred             ccccCHHHHcCCC-CCCHHHHHHHHHHHHHHcc---CCCCcc--HHHHHHHHHhcCC-----------------CC----
Confidence            9999999998744 8999999999999999996   665432  2222222211110                 00    


Q ss_pred             hhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       144 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                          ......+..+.+||.+||+.||++|||++|+++||||++..
T Consensus       247 ----~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          247 ----PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             ----HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             ----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence                01122456778999999999999999999999999999874

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.98  E-value=4e-33  Score=217.83  Aligned_cols=185  Identities=33%  Similarity=0.517  Sum_probs=132.2

Q ss_pred             HHhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCch
Q psy6390           6 QLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus         6 ~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      +.....+++..++.++.||+.||+||         |||      .++.+||+|||+++...... .....+||+.|+|||
T Consensus       155 ~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE  233 (464)
T 3ttj_A          155 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE  233 (464)
T ss_dssp             HHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC-CC----CCCTTCCHH
T ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc-ccCCCcccccccCHH
Confidence            33345699999999999999999999         777      45778999999998765432 234568899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC-CCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-PDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  149 (197)
                      ++.+.. ++.++||||+||++++|++|+.||.+.+..+.+..+.+.++.+....+...... ..+....+..........
T Consensus       234 ~~~~~~-~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (464)
T 3ttj_A          234 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL  312 (464)
T ss_dssp             HHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHH
T ss_pred             HHcCCC-CCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHh
Confidence            998754 899999999999999999999999999999999999999888766544332100 000000000000000000


Q ss_pred             c------------CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         150 V------------KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       150 ~------------~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                      .            ...+..+++||.+||..||++|||++|+++||||+.+.++.+
T Consensus       313 ~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~~  367 (464)
T 3ttj_A          313 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAE  367 (464)
T ss_dssp             SCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCHHH
T ss_pred             CcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhccCccc
Confidence            0            011567899999999999999999999999999997765544

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=1.5e-32  Score=208.98  Aligned_cols=179  Identities=36%  Similarity=0.591  Sum_probs=138.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|+++||+||         |||      .++.+||+|||+++.....   .....+|+.|+|||++.+
T Consensus       123 ~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~  199 (367)
T 1cm8_A          123 EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---MTGYVVTRWYRAPEVILN  199 (367)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---CCSSCSCGGGCCTHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc---cCcCcCCCCcCCHHHHhC
Confidence            5699999999999999999999         777      5577999999999876543   234578999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC--CCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL--PDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...++.++|+||+||++++|++|+.||.+.+..+.+..+....+.++...+......  ..+...++...........+.
T Consensus       200 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (367)
T 1cm8_A          200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTN  279 (367)
T ss_dssp             TTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTT
T ss_pred             CCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCC
Confidence            556899999999999999999999999999999999999988888765433222110  000001111111222334466


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      .+..+.+|+.+||..||++|||++++++||||++..+..
T Consensus       280 ~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~  318 (367)
T 1cm8_A          280 ASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTE  318 (367)
T ss_dssp             CCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC---
T ss_pred             CCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCc
Confidence            889999999999999999999999999999999876543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.98  E-value=2e-32  Score=213.86  Aligned_cols=181  Identities=38%  Similarity=0.650  Sum_probs=129.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--------------------   54 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--------------------   54 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++......                    
T Consensus       151 ~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (458)
T 3rp9_A          151 VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF  230 (458)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC-------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccc
Confidence            3599999999999999999999         777      55778999999998764221                    


Q ss_pred             -------cccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHh-----------CCCCCCCCC-----------
Q psy6390          55 -------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-----------RKPLFQGDS-----------  105 (197)
Q Consensus        55 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~-----------~~~~~~~~~-----------  105 (197)
                             ......+||+.|+|||++.....++.++||||+||++|+|++           |.++|.+..           
T Consensus       231 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~  310 (458)
T 3rp9_A          231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAG  310 (458)
T ss_dssp             --------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------
T ss_pred             cccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCcccccccccccc
Confidence                   123345779999999988665669999999999999999998           667776543           


Q ss_pred             ---------hHHHHHHHHhhcCCCCCCCCCCCCCC--CCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCC
Q psy6390         106 ---------EIDQLFRIFRVLTTPTEDNWPGVSKL--PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRIN  174 (197)
Q Consensus       106 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s  174 (197)
                               ..+.+..+...++.+..+.+......  ..+...++...........+..+.++.+||.+||..||++|||
T Consensus       311 ~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t  390 (458)
T 3rp9_A          311 NDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRIT  390 (458)
T ss_dssp             ------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             ccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCC
Confidence                     35667778888887765433322210  0001111112222234445678999999999999999999999


Q ss_pred             HHHHhcCcccCCCCCc
Q psy6390         175 AENALKHKYFADKTDL  190 (197)
Q Consensus       175 ~~ell~hp~~~~~~~~  190 (197)
                      ++|+|+||||++....
T Consensus       391 ~~e~L~Hp~f~~~~~~  406 (458)
T 3rp9_A          391 INECLAHPFFKEVRIA  406 (458)
T ss_dssp             HHHHHHSGGGTTTCCG
T ss_pred             HHHHhcCHhhhhcCCC
Confidence            9999999999987543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.98  E-value=1.3e-32  Score=209.32  Aligned_cols=179  Identities=34%  Similarity=0.562  Sum_probs=130.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.||++||+||         |||      +++.+||+|||+++.....   .....+|+.|+|||++.+
T Consensus       127 ~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~  203 (367)
T 2fst_X          127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEIMLN  203 (367)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC------------------CCCTTCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc---CCCcCcCcCccChHHHcC
Confidence            4699999999999999999999         777      5577899999999865432   234578999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...++.++||||+||++++|++|+.||.+.+..+.+..+.+..+.+....+.......  .+...++.............
T Consensus       204 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (367)
T 2fst_X          204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIG  283 (367)
T ss_dssp             CCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTT
T ss_pred             CcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCC
Confidence            5568999999999999999999999999999999999999988887654443322110  00001111111222333456


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      .+..+.+||.+||..||++|||++++++||||++..++.
T Consensus       284 ~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~  322 (367)
T 2fst_X          284 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD  322 (367)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCGG
T ss_pred             CCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCCC
Confidence            789999999999999999999999999999999876654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.98  E-value=3.8e-32  Score=208.52  Aligned_cols=178  Identities=30%  Similarity=0.575  Sum_probs=135.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||+.||+||         |||       .++.+||+|||+++....... .....+|+.|+|||++.
T Consensus       136 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~-~~~~~~t~~y~aPE~~~  214 (394)
T 4e7w_A          136 QTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP-NVSYICSRYYRAPELIF  214 (394)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC-CCSSCSCGGGCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC-CcccccCcCccCHHHHc
Confidence            5699999999999999999999         666       567889999999987644322 23457799999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh-hhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL-DKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  152 (197)
                      +...++.++||||+||++|+|++|+.||.+.+..+.+..+...++.+....+...... .....++....... ......
T Consensus       215 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  293 (394)
T 4e7w_A          215 GATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPN-YMEHKFPQIRPHPFSKVFRPR  293 (394)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGG-GSSSCCCCCCCCCHHHHSCTT
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChh-hhhhccccccCCcHHHhcccc
Confidence            7666899999999999999999999999999999999999988887765322111100 00001111111111 112245


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .+.++.+||.+||..||++|||++|+++||||++...
T Consensus       294 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          294 TPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT  330 (394)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred             CCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence            8899999999999999999999999999999997654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=2.4e-31  Score=199.46  Aligned_cols=154  Identities=23%  Similarity=0.352  Sum_probs=126.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++.+++.++.|+++||+||         |||      .++.+||+|||++........ ....+||+.|+|||++.
T Consensus       108 ~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~  186 (328)
T 3fe3_A          108 HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-LDAFCGAPPYAAPELFQ  186 (328)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG-GGTTSSSGGGCCHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc-cccccCCcceeCccccc
Confidence            35699999999999999999999         777      557789999999986654332 34557899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +....+.++||||+||++|+|++|..||.+.+.......+.......                             ...+
T Consensus       187 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~  237 (328)
T 3fe3_A          187 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI-----------------------------PFYM  237 (328)
T ss_dssp             TCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------------------------CTTS
T ss_pred             CCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----------------------------CCCC
Confidence            76644589999999999999999999999988877777765421111                             1236


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                      +.++.+|+.+||..||++|||++|+++||||+...+..+
T Consensus       238 s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~~~~  276 (328)
T 3fe3_A          238 STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDE  276 (328)
T ss_dssp             CHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCTTCC
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCcccc
Confidence            789999999999999999999999999999987665444

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=3.4e-31  Score=200.29  Aligned_cols=184  Identities=35%  Similarity=0.617  Sum_probs=139.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC----ccccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP----VRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~----~~~~~~~~~~~~y~aPE   70 (197)
                      .++++.+++.++.|+++||+||         |||      .++.+||+|||.++.....    ........+|+.|+|||
T Consensus       119 ~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  198 (351)
T 3mi9_A          119 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPE  198 (351)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCch
Confidence            4699999999999999999999         777      4577899999999866421    12233457799999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCC-c--ccchhhhh
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF-P--EWSNFCLD  147 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~  147 (197)
                      ++.+...++.++||||+||++++|++|..||.+.........+....+.++...++.......+.... .  ........
T Consensus       199 ~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (351)
T 3mi9_A          199 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDR  278 (351)
T ss_dssp             HHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHH
T ss_pred             hhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHH
Confidence            99876668999999999999999999999999999999999999988888777666544322211100 0  00000000


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      ......+..+.+||.+||+.||++|||++|+++||||++...+.+.
T Consensus       279 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~  324 (351)
T 3mi9_A          279 LKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDL  324 (351)
T ss_dssp             HHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCCCCS
T ss_pred             hhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCcccc
Confidence            0001146789999999999999999999999999999877665544

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=1e-31  Score=207.63  Aligned_cols=177  Identities=28%  Similarity=0.562  Sum_probs=134.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||+.||+||         |||       ++..+||+|||+++....... .....+|+.|+|||++.
T Consensus       151 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~-~~~~~~t~~y~aPE~~~  229 (420)
T 1j1b_A          151 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP-NVSYICSRYYRAPELIF  229 (420)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC-CCSCCSCTTSCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCC-ceeeeeCCCcCCHHHHc
Confidence            5699999999999999999999         776       335679999999987643322 23457899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCC-CCCCCCCCcccchhhhh-hccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK-LPDYKTTFPEWSNFCLD-KHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~  151 (197)
                      +...++.++||||+||++|+|++|+.||.+.+..+.+..+...++.+..+.+..... ...  ..++........ ...+
T Consensus       230 ~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~  307 (420)
T 1j1b_A          230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE--FKFPQIKAHPWTKVFRP  307 (420)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCC--CCCCCCCCCCHHHHSCT
T ss_pred             CCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh--hccCccCCCCHHHhcCC
Confidence            765689999999999999999999999999999999999888888765433221110 000  011111111111 1224


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+.++.+||.+||..||++|||++|+++||||++..+
T Consensus       308 ~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          308 RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  345 (420)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             CCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence            57899999999999999999999999999999986543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=4.4e-32  Score=210.42  Aligned_cols=181  Identities=39%  Similarity=0.659  Sum_probs=130.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-------------------   55 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-------------------   55 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++.......                   
T Consensus       124 ~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (432)
T 3n9x_A          124 IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN  203 (432)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC------------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccc
Confidence            3599999999999999999999         777      556789999999987643221                   


Q ss_pred             ---ccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHh-----------CCCCCCCCC----------------
Q psy6390          56 ---IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIAT-----------RKPLFQGDS----------------  105 (197)
Q Consensus        56 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~-----------~~~~~~~~~----------------  105 (197)
                         .....++|+.|+|||++.....++.++||||+||++++|++           |.++|.+.+                
T Consensus       204 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~  283 (432)
T 3n9x_A          204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEK  283 (432)
T ss_dssp             -------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHH
T ss_pred             hhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCccccccccccc
Confidence               13456789999999998665669999999999999999997           444554433                


Q ss_pred             -hHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCc
Q psy6390         106 -EIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHK  182 (197)
Q Consensus       106 -~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp  182 (197)
                       ..+.+..+...++.+....+.......  .+....+...........+.++..+.+||.+||..||++|||++|+++||
T Consensus       284 ~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp  363 (432)
T 3n9x_A          284 SNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHP  363 (432)
T ss_dssp             HHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCG
T ss_pred             chHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCh
Confidence             357778888888887654333222100  00001111111223334467899999999999999999999999999999


Q ss_pred             ccCCCCCc
Q psy6390         183 YFADKTDL  190 (197)
Q Consensus       183 ~~~~~~~~  190 (197)
                      ||++....
T Consensus       364 ~f~~~~~~  371 (432)
T 3n9x_A          364 YLKDVRKK  371 (432)
T ss_dssp             GGTTTCCT
T ss_pred             hhhhccCc
Confidence            99987554

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=1.6e-31  Score=199.77  Aligned_cols=143  Identities=17%  Similarity=0.257  Sum_probs=110.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      .++++.++..++.||++||+||         |||      +++.+||+|||+|+......  .......||+.|||||++
T Consensus       153 ~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~  232 (329)
T 4aoj_A          153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI  232 (329)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhh
Confidence            3599999999999999999999         777      56788999999998764322  122345789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|||++ |+.||.+.+..+....+......+                            .+.
T Consensus       233 ~~~~-~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~----------------------------~p~  283 (329)
T 4aoj_A          233 LYRK-FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE----------------------------RPR  283 (329)
T ss_dssp             TTCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCC----------------------------CCT
T ss_pred             cCCC-CCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------Ccc
Confidence            8755 8999999999999999998 899999988888777765532111                            113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++.++.+|+.+||+.||++|||++||+++
T Consensus       284 ~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          284 ACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             TCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             cccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            477899999999999999999999999754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=9.8e-32  Score=200.02  Aligned_cols=180  Identities=38%  Similarity=0.666  Sum_probs=127.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |||      +++.++|+|||.+..............+|..|+|||++.+
T Consensus        97 ~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (311)
T 4agu_A           97 RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG  176 (311)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhc
Confidence            4599999999999999999999         777      5577899999999877654444455678999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC--------CCCCCCCCCCCCcccchhhh
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWP--------GVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  146 (197)
                      ...++.++|+||+|++++++++|..||.+....+....+....+........        .....+...      .....
T Consensus       177 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  250 (311)
T 4agu_A          177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPE------DMEPL  250 (311)
T ss_dssp             CSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCS------SCCCH
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCcc------ccchh
Confidence            6668999999999999999999999999998888887776665543321100        000000000      00112


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhhc
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE  195 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~~  195 (197)
                      ....+.++..+.+|+.+||+.||++|||++|+++||||++..+..++++
T Consensus       251 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~  299 (311)
T 4agu_A          251 ELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAK  299 (311)
T ss_dssp             HHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-------
T ss_pred             hhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCHHHHHH
Confidence            2233568899999999999999999999999999999999888776654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=9.1e-32  Score=199.37  Aligned_cols=142  Identities=16%  Similarity=0.213  Sum_probs=116.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++.++..++.||++||+||         |||      +++.+||+|||+|+......  .......||+.|||||++.
T Consensus       141 ~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~  220 (308)
T 4gt4_A          141 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM  220 (308)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHh
Confidence            589999999999999999999         777      44678999999998654322  2233457899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++||+++ |..||.+.+..+....+......+                            .+..
T Consensus       221 ~~~-~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~----------------------------~p~~  271 (308)
T 4gt4_A          221 YGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP----------------------------CPDD  271 (308)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCC----------------------------CCTT
T ss_pred             CCC-CCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------Cccc
Confidence            755 9999999999999999998 899999998887777665421111                            1134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ++..+.+|+.+||+.||++|||++||+++
T Consensus       272 ~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          272 CPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             chHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            77899999999999999999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=9.4e-32  Score=198.52  Aligned_cols=146  Identities=18%  Similarity=0.257  Sum_probs=118.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++.++..++.||++||+||         |||      +++.+||+|||+|+.......  ......||+.|||||++
T Consensus       123 ~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~  202 (299)
T 4asz_A          123 TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI  202 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHH
Confidence            3599999999999999999999         777      446789999999986544322  22335689999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|||++ |+.||.+.+..+....+......+                            .+.
T Consensus       203 ~~~~-~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~----------------------------~p~  253 (299)
T 4asz_A          203 MYRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQ----------------------------RPR  253 (299)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCC----------------------------CCT
T ss_pred             cCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CCc
Confidence            8755 9999999999999999998 899999988888777776532111                            113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      .++.++.+|+.+||+.||++|||+++++  +|+++
T Consensus       254 ~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~~  286 (299)
T 4asz_A          254 TCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQN  286 (299)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHHH
T ss_pred             cchHHHHHHHHHHcCCChhHCcCHHHHH--HHHHH
Confidence            4778999999999999999999999994  56654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.9e-31  Score=203.94  Aligned_cols=176  Identities=33%  Similarity=0.574  Sum_probs=135.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||+.||+||         |||       +++.+||+|||.++....... .....+|+.|+|||++.
T Consensus       136 ~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~  214 (383)
T 3eb0_A          136 RSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-SVAYICSRFYRAPELML  214 (383)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-CCCCCCCSSCCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-CcCcccCCCccCHHHhc
Confidence            5699999999999999999999         666       467899999999987644322 33457799999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccch-hhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN-FCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  152 (197)
                      +...++.++||||+||++++|++|..||.+....+.+..+....+.+..+.+....... ....++.... .........
T Consensus       215 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  293 (383)
T 3eb0_A          215 GATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHY-TEVRFPTLKAKDWRKILPEG  293 (383)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC---CCCCCCCCCCHHHHSCTT
T ss_pred             CCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCccc-ccccCCccCcccHHhhCCCC
Confidence            76668999999999999999999999999999999999999888877654322111000 0001111111 111222345


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .+..+.+||.+||..||++|||++|+++||||++.
T Consensus       294 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          294 TPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence            88999999999999999999999999999999754

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.97  E-value=1.3e-31  Score=201.88  Aligned_cols=143  Identities=20%  Similarity=0.251  Sum_probs=113.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++.++..++.||++||+||         |||      +++.+||+|||+|+......  .......||+.|||||++.
T Consensus       181 ~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~  260 (353)
T 4ase_A          181 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  260 (353)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHh
Confidence            489999999999999999999         777      45778999999998764432  2233457899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++|||++ |..||.+......+.........+                           ..+..
T Consensus       261 ~~~-y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~---------------------------~~p~~  312 (353)
T 4ase_A          261 DRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM---------------------------RAPDY  312 (353)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCC---------------------------CCCTT
T ss_pred             cCC-CCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCC---------------------------CCCcc
Confidence            755 9999999999999999998 899998866444443333211111                           01134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ++.++.+++.+||+.||++|||++||++|
T Consensus       313 ~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          313 TTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            67899999999999999999999999987

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.97  E-value=1.5e-30  Score=192.73  Aligned_cols=156  Identities=25%  Similarity=0.332  Sum_probs=127.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |||      .++.+||+|||++..............||+.|+|||++.+
T Consensus       111 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  190 (297)
T 3fxz_A          111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR  190 (297)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcC
Confidence            4599999999999999999999         777      4577899999999877655444555688999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++||||+||++|+|++|..||...........+........                          .....++
T Consensus       191 ~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~  243 (297)
T 3fxz_A          191 KA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--------------------------QNPEKLS  243 (297)
T ss_dssp             SC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC--------------------------SCGGGSC
T ss_pred             CC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--------------------------CCccccC
Confidence            54 89999999999999999999999998887776666544221110                          0113467


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                      ..+.+++.+||+.||++|||++|+++||||+.......
T Consensus       244 ~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~  281 (297)
T 3fxz_A          244 AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSS  281 (297)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGG
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhhChhhcccCcccc
Confidence            88999999999999999999999999999997765443

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=2.2e-31  Score=206.29  Aligned_cols=179  Identities=30%  Similarity=0.457  Sum_probs=129.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC------Cc--EEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS------NI--VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~--vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..++.++.||++||+||         |||+|      +.  +||+|||++......   .....+|+.|+|||++
T Consensus       195 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~---~~~~~gt~~y~aPE~~  271 (429)
T 3kvw_A          195 QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR---VYTYIQSRFYRAPEVI  271 (429)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC---CCSSCSCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCc---ccccCCCCCccChHHH
Confidence            4599999999999999999999         77733      33  899999999765433   2245789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC---------CCC------C--
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL---------PDY------K--  135 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~------~--  135 (197)
                      .+.. ++.++||||+||++|+|++|..||.+.+..+.+..+....+.++...+......         +.+      .  
T Consensus       272 ~~~~-~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (429)
T 3kvw_A          272 LGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDG  350 (429)
T ss_dssp             HTBC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC-
T ss_pred             hCCC-CCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccc
Confidence            8755 899999999999999999999999999999999998888777654321111000         000      0  


Q ss_pred             -------------CCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         136 -------------TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       136 -------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                                   ...+..............+..+.+||.+||+.||++|||++|+++||||++......
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~~~  420 (429)
T 3kvw_A          351 SVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPP  420 (429)
T ss_dssp             -CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-------
T ss_pred             cccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCCCC
Confidence                         000000011111122345788999999999999999999999999999998765443

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=1.4e-31  Score=203.47  Aligned_cols=182  Identities=32%  Similarity=0.609  Sum_probs=137.6

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE   70 (197)
                      ...+++..++.++.|+++||+||         |||      .++.+||+|||.++.......   ......||+.|+|||
T Consensus       122 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  201 (364)
T 3qyz_A          122 TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE  201 (364)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHH
T ss_pred             hCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCH
Confidence            35699999999999999999999         777      456789999999987654322   123457899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhhh
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDK  148 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  148 (197)
                      ++.+...++.++||||+||++|+|++|..||.+....+.+..+....+.+....+.......  .+....+.........
T Consensus       202 ~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (364)
T 3qyz_A          202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR  281 (364)
T ss_dssp             HHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHH
T ss_pred             HhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHH
Confidence            98776668999999999999999999999999999888888888877776554332211100  0000001111111233


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..+.++..+.+||.+||..||++|||++|+++||||++..+.
T Consensus       282 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  323 (364)
T 3qyz_A          282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP  323 (364)
T ss_dssp             HCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             hCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccCc
Confidence            346688999999999999999999999999999999987543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=2.5e-30  Score=194.49  Aligned_cols=148  Identities=22%  Similarity=0.301  Sum_probs=123.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++............+||+.|+|||++.+
T Consensus       100 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  179 (337)
T 1o6l_A          100 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED  179 (337)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcC
Confidence            4699999999999999999999         777      5578899999999865444344456689999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.+.......+......                             ....++
T Consensus       180 ~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~p~~~s  229 (337)
T 1o6l_A          180 ND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-----------------------------FPRTLS  229 (337)
T ss_dssp             SC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-----------------------------CCTTSC
T ss_pred             CC-CCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-----------------------------CCCCCC
Confidence            44 899999999999999999999999988877766666542111                             013467


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      .++.++|.+||+.||++||     +++++++||||++.
T Consensus       230 ~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            8999999999999999999     99999999999865

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=4.1e-31  Score=199.93  Aligned_cols=148  Identities=22%  Similarity=0.304  Sum_probs=120.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++............+||+.|+|||++.+
T Consensus       119 ~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  198 (353)
T 3txo_A          119 RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQE  198 (353)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCC
Confidence            5699999999999999999999         777      5578899999999865544444455689999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.+..+....+.......                             ...++
T Consensus       199 ~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~~  248 (353)
T 3txo_A          199 ML-YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY-----------------------------PTWLH  248 (353)
T ss_dssp             HH-CTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------------------------CTTSC
T ss_pred             CC-cCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-----------------------------CCCCC
Confidence            54 8899999999999999999999999998888887776521111                             12367


Q ss_pred             HhHHHHHHhhcccCCCCCCCH------HHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA------ENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~------~ell~hp~~~~~  187 (197)
                      ..+.++|.+||..||++||++      +++++||||+++
T Consensus       249 ~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          249 EDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            899999999999999999998      899999999876

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=3.2e-31  Score=204.09  Aligned_cols=178  Identities=38%  Similarity=0.698  Sum_probs=129.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC----------CCCcEEEeecCCccccCCCc---cccccceeccceeC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP----------KSNIVKVADFGLARAFGVPV---RIYTHEVVTLWYRA   68 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp----------~~~~vkl~Dfg~s~~~~~~~---~~~~~~~~~~~y~a   68 (197)
                      .+++..++.++.||+.||+||         |||          .++.+||+|||+++......   .......||+.|+|
T Consensus       124 ~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  203 (405)
T 3rgf_A          124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  203 (405)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccC
Confidence            499999999999999999999         565          34678999999998764321   22334578999999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh---------HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCc
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---------IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP  139 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (197)
                      ||++.+...++.++||||+||++|+|++|..||.+...         .+.+..+...++.+....|......+.......
T Consensus       204 PE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~  283 (405)
T 3rgf_A          204 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK  283 (405)
T ss_dssp             HHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHH
T ss_pred             chhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhh
Confidence            99998766689999999999999999999999976554         478888999999888877766544333211100


Q ss_pred             ccc---------hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         140 EWS---------NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       140 ~~~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ...         ...........+..+.+||.+||..||++|||++|+|+||||++..
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~  341 (405)
T 3rgf_A          284 DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP  341 (405)
T ss_dssp             HCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred             hccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence            000         0111122233478899999999999999999999999999998653

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=1.1e-30  Score=202.90  Aligned_cols=151  Identities=28%  Similarity=0.382  Sum_probs=125.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.||++||+||         |||+|         +.+||+|||++..............||+.|+|||+
T Consensus       105 ~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~  184 (444)
T 3soa_A          105 EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV  184 (444)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHH
Confidence            4599999999999999999999         77743         56899999999877655444455689999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++||||+||++|+|++|..||.+.+.......+.......+...                         +.
T Consensus       185 l~~~~-~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~  238 (444)
T 3soa_A          185 LRKDP-YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE-------------------------WD  238 (444)
T ss_dssp             HTTCC-BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTT-------------------------TT
T ss_pred             hcCCC-CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccc-------------------------cc
Confidence            97644 89999999999999999999999999888888777765433222111                         14


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      .++..+.+||.+||+.||++|||++|+++||||++
T Consensus       239 ~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          239 TVTPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence            47889999999999999999999999999999964

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=2.2e-31  Score=202.77  Aligned_cols=184  Identities=32%  Similarity=0.501  Sum_probs=135.1

Q ss_pred             HHHhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCc
Q psy6390           5 IQLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAP   69 (197)
Q Consensus         5 ~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aP   69 (197)
                      .+.....+++..++.++.|++.||+||         |||      +++.+||+|||.++.....   .....+|+.|+||
T Consensus       134 ~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~---~~~~~~t~~y~aP  210 (371)
T 4exu_A          134 QKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAP  210 (371)
T ss_dssp             HHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC-----------CTTCCCTTSCH
T ss_pred             HHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---cCCcccCccccCH
Confidence            333445699999999999999999999         777      4567899999999865433   2344679999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLD  147 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  147 (197)
                      |++.+...++.++||||+||+++++++|..||.+.+..+.+..+....+.+............  .+....+........
T Consensus       211 E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (371)
T 4exu_A          211 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFT  290 (371)
T ss_dssp             HHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHH
T ss_pred             HHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHH
Confidence            999875568999999999999999999999999999999999888887776554332221100  000000001111122


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ...+..+..+.+||.+||+.||++|||++|+++||||+...+..
T Consensus       291 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  334 (371)
T 4exu_A          291 QLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE  334 (371)
T ss_dssp             HHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred             HhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCCcc
Confidence            33456789999999999999999999999999999999775543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=4.5e-30  Score=192.15  Aligned_cols=176  Identities=47%  Similarity=0.774  Sum_probs=139.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|+++||+||         |+|      .++.++|+|||.++...... ......++..|+|||++.+.
T Consensus       116 ~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  194 (326)
T 1blx_A          116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQS  194 (326)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCC-CccccccccceeCHHHHhcC
Confidence            499999999999999999999         666      55778999999998665332 23345789999999999875


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                      . ++.++||||+||++|++++|..||.+....+....+....+.+....|+.....+...  +..............++.
T Consensus       195 ~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  271 (326)
T 1blx_A          195 S-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA--FHSKSAQPIEKFVTDIDE  271 (326)
T ss_dssp             C-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGG--SCCCCCCCGGGTCCSCCH
T ss_pred             C-CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhh--hcccCcchhhhccccCCH
Confidence            4 8899999999999999999999999999999998888888877666665433222111  111111123334466889


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      .+.+|+.+||..||++|||++++++||||++....
T Consensus       272 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          272 LGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence            99999999999999999999999999999987554

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=8.8e-31  Score=198.76  Aligned_cols=186  Identities=30%  Similarity=0.457  Sum_probs=132.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||.||         |||      +++.++|+|||.++...... ......+|+.|+|||++.+
T Consensus       129 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~  207 (362)
T 3pg1_A          129 IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQ  207 (362)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC----------------CGGGCCHHHHTT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccccc-ccceecccceecCcHHhcC
Confidence            3699999999999999999999         777      45778999999997554332 2334578899999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC---CCCCCCCcccchhhhhhccC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL---PDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  151 (197)
                      ...++.++||||+||++|++++|..||.+.........+....+.+...........   ...................+
T Consensus       208 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (362)
T 3pg1_A          208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVP  287 (362)
T ss_dssp             CTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHST
T ss_pred             CCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCC
Confidence            555899999999999999999999999999988888888887776543321100000   00000011111112233345


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhhcc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAEY  196 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~~~  196 (197)
                      ..+..+.+||.+||+.||++|||++|+++||||++..++.++.+.
T Consensus       288 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~~  332 (362)
T 3pg1_A          288 TADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEG  332 (362)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCGGGGTTT
T ss_pred             CCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCccccccc
Confidence            678899999999999999999999999999999999888776653

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=1.8e-30  Score=196.94  Aligned_cols=152  Identities=23%  Similarity=0.355  Sum_probs=124.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC------C----cEEEeecCCccccCCCccccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS------N----IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~----~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ..+++..+..++.||+.||+||         |||+|      +    .+||+|||+++....... .....||+.|+|||
T Consensus       110 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE  188 (361)
T 2yab_A          110 ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPE  188 (361)
T ss_dssp             SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCC-CCCCCSCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCc-cccCCCCccEECch
Confidence            4699999999999999999999         77733      2    689999999987654322 33457899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      ++.+.. ++.++|+||+||++|+|++|..||.+.+..+....+.......+                         ...+
T Consensus       189 ~~~~~~-~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~  242 (361)
T 2yab_A          189 IVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD-------------------------EEFF  242 (361)
T ss_dssp             HHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC-------------------------HHHH
T ss_pred             HHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC-------------------------chhc
Confidence            997644 89999999999999999999999999888877777654321111                         1122


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ..++..+.+||.+||..||++|||++|+++||||+...
T Consensus       243 ~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          243 SQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             cCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence            55788999999999999999999999999999998653

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=1.7e-30  Score=195.91  Aligned_cols=148  Identities=24%  Similarity=0.358  Sum_probs=123.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++............+||+.|+|||++.+
T Consensus       113 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  192 (345)
T 1xjd_A          113 HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG  192 (345)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcC
Confidence            4699999999999999999999         777      5578999999999865443333445688999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.+.......+......                             ....++
T Consensus       193 ~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~p~~~s  242 (345)
T 1xjd_A          193 QK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF-----------------------------YPRWLE  242 (345)
T ss_dssp             CC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-----------------------------CCTTSC
T ss_pred             CC-CCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCC-----------------------------CCcccC
Confidence            54 899999999999999999999999998887777766542110                             012367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHH-HHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAE-NALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~-ell~hp~~~~~  187 (197)
                      ..+.+||.+||..||++||++. ++++||||+++
T Consensus       243 ~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          243 KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             HHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence            8999999999999999999998 99999999876

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=5.7e-31  Score=201.24  Aligned_cols=176  Identities=31%  Similarity=0.519  Sum_probs=126.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-----------ccCC--------CCcEEEeecCCccccCCCccccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-----------IKPK--------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-----------lkp~--------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ..+++..++.++.|++.||.||           |||+        ++.+||+|||+++.....   .....+|+.|+|||
T Consensus       152 ~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE  228 (382)
T 2vx3_A          152 RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---IYQYIQSRFYRSPE  228 (382)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC---CCSSCSCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc---cccccCCccccChH
Confidence            4599999999999999999998           6663        456899999999876543   23457899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC-------------------
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-------------------  131 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  131 (197)
                      ++.+.. ++.++||||+||++|+|++|..||.+.+..+.+..+....+.++...+......                   
T Consensus       229 ~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (382)
T 2vx3_A          229 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKD  307 (382)
T ss_dssp             HHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCT
T ss_pred             HHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccc
Confidence            998755 899999999999999999999999999999999888887776654322111100                   


Q ss_pred             --CCCCCC-Ccccchhhh-------hhc--cCC----CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         132 --PDYKTT-FPEWSNFCL-------DKH--VKN----LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       132 --~~~~~~-~~~~~~~~~-------~~~--~~~----~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                        ..+... .........       ...  ...    .+..+.+||.+||+.||++|||++|+|+||||++..+
T Consensus       308 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~~  381 (382)
T 2vx3_A          308 GKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD  381 (382)
T ss_dssp             TCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC---
T ss_pred             cccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCCC
Confidence              000000 000000000       000  000    1137899999999999999999999999999997643

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=5e-30  Score=193.96  Aligned_cols=148  Identities=18%  Similarity=0.265  Sum_probs=123.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++............+||+.|+|||++.+
T Consensus       116 ~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  195 (353)
T 2i0e_A          116 GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY  195 (353)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcC
Confidence            4699999999999999999999         777      5578999999999865443333445688999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.+.......+.......                             ...++
T Consensus       196 ~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~s  245 (353)
T 2i0e_A          196 QP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY-----------------------------PKSMS  245 (353)
T ss_dssp             CC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------------------------CTTSC
T ss_pred             CC-cCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCC-----------------------------CCCCC
Confidence            44 8999999999999999999999999988877777776521110                             13467


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+.+||.+||..||++||+     ++++++||||+++
T Consensus       246 ~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          246 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence            89999999999999999994     6999999999865

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=9.8e-31  Score=197.95  Aligned_cols=180  Identities=32%  Similarity=0.510  Sum_probs=131.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++..+..++.|+++||+||         |+|      +++.+||+|||.++.....   .....+|+.|+|||++.
T Consensus       120 ~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~  196 (353)
T 3coi_A          120 GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVIL  196 (353)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-----------CCSBCCSCHHHHS
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---ccccccCcCcCCHHHHh
Confidence            34699999999999999999999         676      5577999999999865432   23457799999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  151 (197)
                      +...++.++|+||+||++++|++|..||.+.+..+.+..+....+.+....+.......  .+....+...........+
T Consensus       197 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (353)
T 3coi_A          197 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFP  276 (353)
T ss_dssp             CCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCT
T ss_pred             CcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcC
Confidence            75558899999999999999999999999999888888888777765543322211100  0000000000111122235


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ..+..+.+||.+||+.||++|||++++++||||+...+..
T Consensus       277 ~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~  316 (353)
T 3coi_A          277 RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE  316 (353)
T ss_dssp             TSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred             CcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCcc
Confidence            6789999999999999999999999999999998776544

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=4.2e-30  Score=194.33  Aligned_cols=181  Identities=36%  Similarity=0.611  Sum_probs=134.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc----------ccccceecc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR----------IYTHEVVTL   64 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~----------~~~~~~~~~   64 (197)
                      ..+++..+..++.|++.||+||         |||      .++.+||+|||.++.......          ......||+
T Consensus       107 ~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~  186 (353)
T 2b9h_A          107 QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR  186 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCG
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccc
Confidence            5699999999999999999999         777      556789999999987643211          112346799


Q ss_pred             ceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCC---CCCCCccc
Q psy6390          65 WYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD---YKTTFPEW  141 (197)
Q Consensus        65 ~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  141 (197)
                      .|+|||++.....++.++||||+||++++|++|..||.+.+.......+....+.+.............   +....+..
T Consensus       187 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (353)
T 2b9h_A          187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMY  266 (353)
T ss_dssp             GGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCC
T ss_pred             cccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCC
Confidence            999999987656689999999999999999999999999998888888887777665432211111000   00011111


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      .........+.++..+.+||.+||..||++|||++++++||||+.....
T Consensus       267 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  315 (353)
T 2b9h_A          267 PAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP  315 (353)
T ss_dssp             CCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred             CCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCc
Confidence            1122233346789999999999999999999999999999999876543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.97  E-value=2.3e-31  Score=202.67  Aligned_cols=181  Identities=33%  Similarity=0.501  Sum_probs=122.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..+..++.|+++||+||         |||      .++.+||+|||.++...... ......+|+.|+|||++.
T Consensus       121 ~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~  199 (371)
T 2xrw_A          121 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVIL  199 (371)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----------------CTTCCHHHHT
T ss_pred             hhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc-ccCCceecCCccCHHHhc
Confidence            35699999999999999999999         777      45778999999998664432 233457899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCC--------CCCCCC-CCcccchh
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK--------LPDYKT-TFPEWSNF  144 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~  144 (197)
                      +.. ++.++||||+||++|+|++|..||.+.+..+....+....+.+....+.....        .+.+.. .+......
T Consensus       200 ~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (371)
T 2xrw_A          200 GMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD  278 (371)
T ss_dssp             TCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCG
T ss_pred             CCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhccc
Confidence            744 89999999999999999999999999999888888888777665433222110        000000 00000000


Q ss_pred             hh----hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         145 CL----DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       145 ~~----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ..    .......+..+.+||.+||..||++|||++|+++||||+...+..
T Consensus       279 ~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~  329 (371)
T 2xrw_A          279 VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS  329 (371)
T ss_dssp             GGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCHH
T ss_pred             ccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCcc
Confidence            00    000011256789999999999999999999999999998765543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=7.4e-30  Score=195.44  Aligned_cols=148  Identities=20%  Similarity=0.304  Sum_probs=117.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++............+||+.|+|||++.+
T Consensus       148 ~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~  227 (396)
T 4dc2_A          148 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG  227 (396)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcC
Confidence            5699999999999999999999         777      5577899999999865444444556689999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh--------HH-HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhh
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE--------ID-QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC  145 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (197)
                      .. ++.++|+||+||++|+|++|..||.....        .. ....+.....                           
T Consensus       228 ~~-~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~---------------------------  279 (396)
T 4dc2_A          228 ED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---------------------------  279 (396)
T ss_dssp             CC-BCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC---------------------------
T ss_pred             CC-CChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc---------------------------
Confidence            54 89999999999999999999999964321        11 2222222100                           


Q ss_pred             hhhccCCCCHhHHHHHHhhcccCCCCCCCH------HHHhcCcccCCC
Q psy6390         146 LDKHVKNLDQDGLDLLEKTLIYCPATRINA------ENALKHKYFADK  187 (197)
Q Consensus       146 ~~~~~~~~~~~~~~li~~~l~~~p~~R~s~------~ell~hp~~~~~  187 (197)
                        .....++.++.+||++||+.||++||++      +|+++||||+++
T Consensus       280 --~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          280 --RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             --CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence              1113478899999999999999999985      799999999876

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=6.4e-30  Score=189.24  Aligned_cols=149  Identities=20%  Similarity=0.295  Sum_probs=120.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |||      .++.+||+|||+++.............+|+.|+|||++.+
T Consensus       132 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (298)
T 2zv2_A          132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSE  211 (298)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhcc
Confidence            4699999999999999999999         777      5577899999999876554434445678999999999976


Q ss_pred             CCC--CCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQR--YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~--~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ...  .+.++||||+||++|+|++|..||...........+.......+                           ....
T Consensus       212 ~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  264 (298)
T 2zv2_A          212 TRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP---------------------------DQPD  264 (298)
T ss_dssp             TCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---------------------------SSSC
T ss_pred             CCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCC---------------------------Cccc
Confidence            442  36789999999999999999999988876665555543211100                           0134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      ++..+.++|.+||+.||++|||++|+++||||+
T Consensus       265 ~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          265 IAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             cCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            778999999999999999999999999999996

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=7.9e-31  Score=197.67  Aligned_cols=152  Identities=20%  Similarity=0.312  Sum_probs=119.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCCC----------cEEEeecCCccccCCCccccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKSN----------IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~----------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ..+++..+..++.||+.||+||         |||+|.          .+||+|||+++............++|+.|+|||
T Consensus       111 ~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE  190 (342)
T 2qr7_A          111 KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE  190 (342)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHH
Confidence            4599999999999999999999         777442          389999999987655443444567899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCC---ChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGD---SEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      ++.+.. ++.++|+||+||++|+|++|..||...   ...+....+.........                         
T Consensus       191 ~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-------------------------  244 (342)
T 2qr7_A          191 VLERQG-YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSG-------------------------  244 (342)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCS-------------------------
T ss_pred             HhcCCC-CCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCc-------------------------
Confidence            997644 788999999999999999999999863   344445555432111111                         


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ..+..++..+.+||.+||..||++|||++++++||||.++
T Consensus       245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence            1124578899999999999999999999999999999754

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=1.4e-29  Score=189.42  Aligned_cols=157  Identities=25%  Similarity=0.374  Sum_probs=126.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|+++||+||         |||      .++.+||+|||++..............||+.|+|||++.+
T Consensus       136 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  215 (321)
T 2c30_A          136 VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISR  215 (321)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcC
Confidence            4699999999999999999999         777      4577899999999876554333445678999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...........+........                          .....++
T Consensus       216 ~~-~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~  268 (321)
T 2c30_A          216 SL-YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL--------------------------KNSHKVS  268 (321)
T ss_dssp             CC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC--------------------------TTGGGSC
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCc--------------------------CccccCC
Confidence            44 88999999999999999999999998887776666544211100                          0013367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      ..+.+++.+||+.||++|||++++++||||.+...+..+
T Consensus       269 ~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~~~~~  307 (321)
T 2c30_A          269 PVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECL  307 (321)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCCGGGG
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcChhhccCCCcccc
Confidence            889999999999999999999999999999877655443

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=1.4e-29  Score=197.13  Aligned_cols=148  Identities=22%  Similarity=0.300  Sum_probs=121.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||+.||+||          |||      .++.+||+|||+++............+||+.|+|||++.
T Consensus       243 ~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~  322 (446)
T 4ejn_A          243 RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE  322 (446)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcC
Confidence            5699999999999999999999          666      457789999999986554444455568999999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|+|++|..||.+.+.......+.......                             ...+
T Consensus       323 ~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~  372 (446)
T 4ejn_A          323 DND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF-----------------------------PRTL  372 (446)
T ss_dssp             TSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------------------------CTTS
T ss_pred             CCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCC-----------------------------CccC
Confidence            755 8999999999999999999999999888877776665421111                             1336


Q ss_pred             CHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      +..+.+||.+||+.||++||     +++|+++||||++.
T Consensus       373 ~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          373 GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            78999999999999999999     99999999999976

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=4.1e-31  Score=198.38  Aligned_cols=180  Identities=35%  Similarity=0.607  Sum_probs=127.2

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..+..++.|++.||+||         |||      .++.++|+|||.+..............++..|+|||.+.
T Consensus       118 ~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~  197 (331)
T 4aaa_A          118 PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLV  197 (331)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHT
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCccccc
Confidence            35699999999999999999999         677      556789999999987655444445567899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC-CCCccc-chhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK-TTFPEW-SNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~  151 (197)
                      +...++.++||||+||++|++++|..||.+....+....+....+...+.........+.+. ...+.. .........+
T Consensus       198 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (331)
T 4aaa_A          198 GDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYP  277 (331)
T ss_dssp             TCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHST
T ss_pred             CCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhccc
Confidence            76558999999999999999999999999998888887777665554321100000000000 000000 0111223345


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .++..+.+|+.+||+.||++|||++|+++||||+...
T Consensus       278 ~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          278 KLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred             chhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCC
Confidence            6889999999999999999999999999999998653

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=6.2e-30  Score=193.88  Aligned_cols=179  Identities=30%  Similarity=0.558  Sum_probs=134.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-----------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-----------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-----------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|++.||.||           |||       .++.+||+|||+++....... .....+|+.|+|||+
T Consensus       124 ~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~  202 (360)
T 3e3p_A          124 VAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP-NVAYICSRYYRAPEL  202 (360)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSC-CCSTTSCGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCC-cccccCCcceeCHHH
Confidence            4689999999999999999988           666       367899999999987654332 234567999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCC----CCCCCcccchhhhh
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD----YKTTFPEWSNFCLD  147 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~  147 (197)
                      +.+...++.++||||+||++|++++|..||.+.+....+..+.+..+.+....+........    +......+ .....
T Consensus       203 ~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  281 (360)
T 3e3p_A          203 IFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPW-SNVFS  281 (360)
T ss_dssp             HTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCH-HHHTT
T ss_pred             HcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCc-ccccc
Confidence            97766689999999999999999999999999999988888888777765433221111000    00000001 11111


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ......+..+.+||.+||+.||++|||++|+++||||++..+.
T Consensus       282 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  324 (360)
T 3e3p_A          282 DHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDP  324 (360)
T ss_dssp             TCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred             hhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCc
Confidence            2223467889999999999999999999999999999876543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.9e-30  Score=194.10  Aligned_cols=150  Identities=21%  Similarity=0.360  Sum_probs=124.2

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCC--------CCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPK--------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~--------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++.++..++.|+++||+||         |||+        ++.+||+|||.+........ .....+|+.|+|||++.
T Consensus        98 ~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~  176 (321)
T 1tki_A           98 ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN-FRLLFTAPEYYAPEVHQ  176 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE-EEEEESCGGGSCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc-cccccCChhhcCcHHhc
Confidence            599999999999999999999         6662        57899999999987654332 33457899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|+|++|..||.+.........+........                         ...++.+
T Consensus       177 ~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~  230 (321)
T 1tki_A          177 HDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD-------------------------EEAFKEI  230 (321)
T ss_dssp             TCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC-------------------------HHHHTTS
T ss_pred             CCC-CCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCC-------------------------hhhhccC
Confidence            644 78999999999999999999999999888877777765322211                         1122457


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      +..+.+++.+||..||++|||++|+++||||++.
T Consensus       231 s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          231 SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            8999999999999999999999999999999764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.96  E-value=1.4e-29  Score=193.64  Aligned_cols=152  Identities=21%  Similarity=0.314  Sum_probs=123.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC--------CCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK--------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~--------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.||+.||+||         |||+        ++.+||+|||+++....... .....+|+.|+|||++
T Consensus       144 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~  222 (387)
T 1kob_A          144 YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-VKVTTATAEFAAPEIV  222 (387)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC-EEEECSSGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc-eeeeccCCCccCchhc
Confidence            3699999999999999999999         6663        35689999999987654322 2345789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+.. ++.++||||+||++|+|++|..||.+.+.......+.........                         .....
T Consensus       223 ~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~~  276 (387)
T 1kob_A          223 DREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE-------------------------DAFSS  276 (387)
T ss_dssp             TTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCS-------------------------STTTT
T ss_pred             cCCC-CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc-------------------------ccccc
Confidence            7644 889999999999999999999999998887777776553221111                         11144


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ++..+.+||.+||..||++|||++++++||||++..
T Consensus       277 ~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          277 VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            788999999999999999999999999999998653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.96  E-value=1.4e-29  Score=205.61  Aligned_cols=148  Identities=18%  Similarity=0.267  Sum_probs=125.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||+      ++.+||+|||+++............+||+.|+|||++.+
T Consensus       437 ~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~  516 (674)
T 3pfq_A          437 GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY  516 (674)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcC
Confidence            5699999999999999999999         8884      467899999999865444344455689999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.+..+....+.......                             ...++
T Consensus       517 ~~-~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~s  566 (674)
T 3pfq_A          517 QP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY-----------------------------PKSMS  566 (674)
T ss_dssp             CC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCC-----------------------------CTTSC
T ss_pred             CC-CCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCC-----------------------------CccCC
Confidence            44 8999999999999999999999999998888887776421111                             13478


Q ss_pred             HhHHHHHHhhcccCCCCCCCH-----HHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA-----ENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~-----~ell~hp~~~~~  187 (197)
                      .++.+||.+||+.||++|+++     ++|++||||+++
T Consensus       567 ~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          567 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence            899999999999999999997     999999999976

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=2e-29  Score=190.23  Aligned_cols=148  Identities=20%  Similarity=0.292  Sum_probs=116.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++............+||+.|+|||++.+
T Consensus       105 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  184 (345)
T 3a8x_A          105 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG  184 (345)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCC
Confidence            4699999999999999999999         777      5678899999999865443334455688999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCC---------hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhh
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDS---------EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC  145 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (197)
                      .. ++.++|+||+||++|+|++|..||....         .......+.....                           
T Consensus       185 ~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~---------------------------  236 (345)
T 3a8x_A          185 ED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---------------------------  236 (345)
T ss_dssp             CC-BCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC---------------------------
T ss_pred             CC-CChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC---------------------------
Confidence            44 8999999999999999999999997521         1122222222100                           


Q ss_pred             hhhccCCCCHhHHHHHHhhcccCCCCCCCH------HHHhcCcccCCC
Q psy6390         146 LDKHVKNLDQDGLDLLEKTLIYCPATRINA------ENALKHKYFADK  187 (197)
Q Consensus       146 ~~~~~~~~~~~~~~li~~~l~~~p~~R~s~------~ell~hp~~~~~  187 (197)
                        .....++..+.+||.+||..||++||++      +++++||||++.
T Consensus       237 --~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          237 --RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             --CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence              0113467899999999999999999995      899999999865

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.96  E-value=2.3e-29  Score=188.63  Aligned_cols=148  Identities=26%  Similarity=0.334  Sum_probs=118.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++.............||+.|+|||++.+
T Consensus       116 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  195 (327)
T 3a62_A          116 GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR  195 (327)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcC
Confidence            4589999999999999999999         777      4467899999999765443333445578999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.+.......+.......                             ...++
T Consensus       196 ~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~~  245 (327)
T 3a62_A          196 SG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL-----------------------------PPYLT  245 (327)
T ss_dssp             SC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC-----------------------------CTTSC
T ss_pred             CC-CCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC-----------------------------CCCCC
Confidence            44 8899999999999999999999999988877777765531111                             13367


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ..+.++|.+||..||++||     +++++++||||++.
T Consensus       246 ~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          246 QEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             HHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            8999999999999999999     89999999999865

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.96  E-value=3.4e-30  Score=195.37  Aligned_cols=172  Identities=26%  Similarity=0.360  Sum_probs=125.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC-------------------------------CCcEEEeecCCccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK-------------------------------SNIVKVADFGLARA   49 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~-------------------------------~~~vkl~Dfg~s~~   49 (197)
                      ..+++..++.++.||+.||+||         |||+                               ++.+||+|||.+..
T Consensus       132 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~  211 (360)
T 3llt_A          132 NGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF  211 (360)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCcee
Confidence            3599999999999999999999         6663                               55689999999986


Q ss_pred             cCCCccccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCC
Q psy6390          50 FGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS  129 (197)
Q Consensus        50 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (197)
                      ....   .....||+.|+|||++.+.. ++.++||||+||++|+|++|..||...+..+....+.......+........
T Consensus       212 ~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~  287 (360)
T 3llt_A          212 KSDY---HGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEAT  287 (360)
T ss_dssp             TTSC---CCSCCSCGGGCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHT
T ss_pred             cCCC---CcCccCcccccCcHHHcCCC-CCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhh
Confidence            5432   23457899999999998755 8999999999999999999999999999888888887776665532111100


Q ss_pred             C--------CCCCCCCCccc---------chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         130 K--------LPDYKTTFPEW---------SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       130 ~--------~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      .        ........+..         ............+..+.+||.+||+.||++|||++|+++||||+
T Consensus       288 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          288 KTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             TSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            0        00000000000         00001111123457888999999999999999999999999996

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=192.68  Aligned_cols=152  Identities=24%  Similarity=0.384  Sum_probs=123.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCC--------CCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPK--------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~--------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ...+++..++.++.||++||+||         |||+        ++.+||+|||+++....... .....||+.|+|||+
T Consensus       181 ~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~  259 (373)
T 2x4f_A          181 SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-LKVNFGTPEFLAPEV  259 (373)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-CCCCCSSCTTCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-cccccCCCcEeChhh
Confidence            34699999999999999999999         6663        35689999999987654332 234578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.... ++.++||||+||++|+|++|..||.+.+..+.+..+.........                         ....
T Consensus       260 ~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~  313 (373)
T 2x4f_A          260 VNYDF-VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED-------------------------EEFQ  313 (373)
T ss_dssp             HTTCB-CCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCS-------------------------GGGT
T ss_pred             ccCCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCh-------------------------hhhc
Confidence            97644 889999999999999999999999999888888777653221110                         1124


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .++..+.+||.+||+.||++|||++|+++||||++.
T Consensus       314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          314 DISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence            578899999999999999999999999999999754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.96  E-value=3.3e-29  Score=187.07  Aligned_cols=145  Identities=22%  Similarity=0.302  Sum_probs=121.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++.....   ....+||+.|+|||++.+
T Consensus       101 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~  177 (318)
T 1fot_A          101 QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---TYTLCGTPDYIAPEVVST  177 (318)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---BCCCCSCTTTCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc---cccccCCccccCHhHhcC
Confidence            4699999999999999999999         777      5578899999999866432   234578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||...+.......+.......                             ....+
T Consensus       178 ~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~~  227 (318)
T 1fot_A          178 KP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF-----------------------------PPFFN  227 (318)
T ss_dssp             CC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCC-----------------------------CTTSC
T ss_pred             CC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----------------------------CCCCC
Confidence            44 8899999999999999999999999888877777765421110                             13367


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      .++.++|.+||..||++|+     +++++++||||++.
T Consensus       228 ~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          228 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence            8999999999999999999     99999999999865

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.96  E-value=2.7e-29  Score=191.17  Aligned_cols=148  Identities=22%  Similarity=0.248  Sum_probs=123.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++++||+|||+++............+||+.|+|||++.+
T Consensus       134 ~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  213 (373)
T 2r5t_A          134 RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK  213 (373)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCC
Confidence            4699999999999999999999         777      5678999999999864433333445688999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.+..+....+......                             ..+.++
T Consensus       214 ~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~~~~~~  263 (373)
T 2r5t_A          214 QP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ-----------------------------LKPNIT  263 (373)
T ss_dssp             CC-CCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCC-----------------------------CCSSSC
T ss_pred             CC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-----------------------------CCCCCC
Confidence            44 899999999999999999999999998887777776542111                             013477


Q ss_pred             HhHHHHHHhhcccCCCCCCCH----HHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINA----ENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~----~ell~hp~~~~~  187 (197)
                      ..+.+||.+||+.||++||++    +++++||||+++
T Consensus       264 ~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          264 NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence            899999999999999999986    689999999875

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.96  E-value=1.6e-29  Score=191.92  Aligned_cols=150  Identities=26%  Similarity=0.385  Sum_probs=121.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++.++..++.||++||+||         |||+|         ..+||+|||++....... ......||+.|+|||+
T Consensus       123 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~  201 (362)
T 2bdw_A          123 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLSPEV  201 (362)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC-SCCCSCSCTTTCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc-ccccCCCCccccCHHH
Confidence            4589999999999999999999         77733         358999999998765432 2334578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++||||+||++|+|++|..||.+.+.......+.......+.                         ..+.
T Consensus       202 ~~~~~-~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~  255 (362)
T 2bdw_A          202 LKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS-------------------------PEWD  255 (362)
T ss_dssp             HTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT-------------------------TGGG
T ss_pred             HccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCc-------------------------cccc
Confidence            97644 899999999999999999999999988877777766543222111                         1113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      .++..+.+||.+||..||++|||++++++||||..
T Consensus       256 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          256 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             GSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            46789999999999999999999999999999964

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.96  E-value=1.5e-29  Score=189.62  Aligned_cols=152  Identities=23%  Similarity=0.357  Sum_probs=123.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC------C----cEEEeecCCccccCCCccccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS------N----IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~----~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ..+++..+..++.|+++||.||         |||+|      +    .+||+|||.++....... .....||+.|+|||
T Consensus       109 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE  187 (326)
T 2y0a_A          109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPE  187 (326)
T ss_dssp             SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSC-CCCCCSCTTTCCHH
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCc-cccccCCcCcCCce
Confidence            4599999999999999999999         77733      3    689999999987654322 23457899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      ++.+.. ++.++||||+||++|+|++|..||.+....+....+........                         ....
T Consensus       188 ~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------------~~~~  241 (326)
T 2y0a_A          188 IVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE-------------------------DEYF  241 (326)
T ss_dssp             HHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCC-------------------------HHHH
T ss_pred             eecCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcC-------------------------cccc
Confidence            997644 89999999999999999999999998888777766654221110                         1122


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ...+..+.+||.+||..||++|||++++++||||++..
T Consensus       242 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            45788999999999999999999999999999998754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.96  E-value=3e-30  Score=195.00  Aligned_cols=176  Identities=28%  Similarity=0.362  Sum_probs=126.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC-------------------------CcEEEeecCCccccCCCcc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS-------------------------NIVKVADFGLARAFGVPVR   55 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-------------------------~~vkl~Dfg~s~~~~~~~~   55 (197)
                      ..+++.+++.++.||+.||+||         |||+|                         +.+||+|||.++.....  
T Consensus       118 ~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--  195 (355)
T 2eu9_A          118 QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--  195 (355)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC--
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc--
Confidence            4699999999999999999999         66643                         45799999999865432  


Q ss_pred             ccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy6390          56 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK  135 (197)
Q Consensus        56 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (197)
                       .....+|+.|+|||++.+.. ++.++||||+||++|+|++|..||......+....+....+..+............+.
T Consensus       196 -~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  273 (355)
T 2eu9_A          196 -HTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFY  273 (355)
T ss_dssp             -CCSSCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEE
T ss_pred             -ccCCcCCCcccCCeeeecCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhc
Confidence             23457899999999998754 8999999999999999999999999998888887777776665442211111000000


Q ss_pred             CCCcccch-----h-h---------hhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         136 TTFPEWSN-----F-C---------LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       136 ~~~~~~~~-----~-~---------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .....|..     . .         ........+..+.+||.+||+.||++|||++|+++||||++...
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  342 (355)
T 2eu9_A          274 KGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP  342 (355)
T ss_dssp             TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred             ccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCCh
Confidence            00000000     0 0         00000112457889999999999999999999999999998743

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.96  E-value=5.6e-29  Score=188.07  Aligned_cols=145  Identities=23%  Similarity=0.330  Sum_probs=122.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++.....   ....+||+.|+|||++.+
T Consensus       136 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~---~~~~~gt~~y~aPE~~~~  212 (350)
T 1rdq_E          136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---TWTLCGTPEALAPEIILS  212 (350)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---BCCCEECGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC---cccccCCccccCHHHhcC
Confidence            4699999999999999999999         777      5577899999999876543   234578999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+||++|+|++|..||.+.+.......+.......                             ...++
T Consensus       213 ~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~~  262 (350)
T 1rdq_E          213 KG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----------------------------PSHFS  262 (350)
T ss_dssp             CC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------------------------CTTCC
T ss_pred             CC-CCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCC-----------------------------CCCCC
Confidence            54 8999999999999999999999999988877777766521110                             13467


Q ss_pred             HhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      ..+.++|.+||+.||++||+     ++++++||||++.
T Consensus       263 ~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence            89999999999999999998     9999999999865

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.96  E-value=4.3e-29  Score=187.18  Aligned_cols=152  Identities=25%  Similarity=0.385  Sum_probs=121.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC---------CCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK---------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~---------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..++.++.|++.||+||         |||+         ++.+||+|||.++....... .....+|+.|+|||+
T Consensus       126 ~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~  204 (327)
T 3lm5_A          126 EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEYLAPEI  204 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----------CCCGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc-cccccCCcCccCCee
Confidence            4699999999999999999999         6662         57899999999987654322 234578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++|+||+||++|+|++|..||......+....+.........                         ....
T Consensus       205 ~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~  258 (327)
T 3lm5_A          205 LNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE-------------------------ETFS  258 (327)
T ss_dssp             HTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT-------------------------TTTT
T ss_pred             ecCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCc-------------------------hhhc
Confidence            97644 889999999999999999999999998888777766554332221                         1114


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .++..+.++|.+||+.||++|||++++++||||++..
T Consensus       259 ~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          259 SVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             ccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence            4678999999999999999999999999999998764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.96  E-value=2e-29  Score=195.26  Aligned_cols=155  Identities=20%  Similarity=0.269  Sum_probs=124.3

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++..++.++.|++.||+||         |||      .++.+||+|||+++....... .....+||+.|+|||++
T Consensus       169 ~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l  248 (437)
T 4aw2_A          169 EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL  248 (437)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHH
Confidence            35699999999999999999999         777      567889999999976654332 23345799999999999


Q ss_pred             cC----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          73 LG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        73 ~~----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ..    ...++.++|+||+||++|+|++|..||.+.+..+....+........                        ...
T Consensus       249 ~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~p~  304 (437)
T 4aw2_A          249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ------------------------FPT  304 (437)
T ss_dssp             HHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC------------------------CCS
T ss_pred             hhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccccc------------------------CCc
Confidence            62    33488999999999999999999999999988888777754211100                        001


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCC--CCCHHHHhcCcccCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFADK  187 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~--R~s~~ell~hp~~~~~  187 (197)
                      ....++.++.+||++||+.+|++  |++++|+++||||+++
T Consensus       305 ~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          305 QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             ccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence            11347899999999999998888  9999999999999875

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.96  E-value=1.5e-30  Score=195.53  Aligned_cols=149  Identities=20%  Similarity=0.291  Sum_probs=115.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++.+++.++.|+++||+||         |||+      ++.+||+|||++....... .....+||+.|+|||++.
T Consensus       102 ~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-~~~~~~gt~~y~aPE~~~  180 (336)
T 3h4j_B          102 KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVIN  180 (336)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-TTCCCTTSTTTSCGGGSC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-ccccccCCcCcCCHHHHc
Confidence            35699999999999999999999         7774      4678999999998765433 234457899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +....+.++||||+||++|++++|..||..........               .   ....           .......+
T Consensus       181 ~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~---------------~---i~~~-----------~~~~p~~~  231 (336)
T 3h4j_B          181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK---------------K---VNSC-----------VYVMPDFL  231 (336)
T ss_dssp             CSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC---------------C---CCSS-----------CCCCCTTS
T ss_pred             CCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH---------------H---HHcC-----------CCCCcccC
Confidence            75534789999999999999999999997543211000               0   0000           00112447


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      +..+.+||.+||..||.+|||++|+++||||+..
T Consensus       232 s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          232 SPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence            8899999999999999999999999999999753

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.96  E-value=1.9e-29  Score=190.78  Aligned_cols=150  Identities=26%  Similarity=0.390  Sum_probs=118.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .+++..++.++.||++||+||         |||+|         ..+||+|||++..............||+.|+|||++
T Consensus       126 ~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~  205 (351)
T 3c0i_A          126 VYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV  205 (351)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHH
Confidence            489999999999999999999         77733         338999999998776554444556789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+.. ++.++||||+||++|+|++|..||.+.. ......+.......                         ....+..
T Consensus       206 ~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~-------------------------~~~~~~~  258 (351)
T 3c0i_A          206 KREP-YGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKM-------------------------NPRQWSH  258 (351)
T ss_dssp             TTCC-BCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCC-------------------------CHHHHTT
T ss_pred             cCCC-CCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCC-------------------------Ccccccc
Confidence            7744 8999999999999999999999998753 33344443311110                         0111245


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ++..+.+||.+||..||++|||++++++||||++.
T Consensus       259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            78899999999999999999999999999999753

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.96  E-value=6e-30  Score=192.16  Aligned_cols=174  Identities=28%  Similarity=0.390  Sum_probs=125.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCC-------------------------CCcEEEeecCCccccCCCccc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPK-------------------------SNIVKVADFGLARAFGVPVRI   56 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~-------------------------~~~vkl~Dfg~s~~~~~~~~~   56 (197)
                      .+++..+..++.|+++||+||         |||+                         ++.++|+|||.++.....   
T Consensus       114 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---  190 (339)
T 1z57_A          114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH---  190 (339)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC---
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc---
Confidence            589999999999999999999         7773                         445899999999865432   


Q ss_pred             cccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q psy6390          57 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKT  136 (197)
Q Consensus        57 ~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (197)
                      .....+|+.|+|||++.+.. ++.++||||+||++|++++|..||...+..+....+....+..+...+........+..
T Consensus       191 ~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  269 (339)
T 1z57_A          191 HSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHH  269 (339)
T ss_dssp             CCSSCSCGGGCCHHHHTTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEET
T ss_pred             cccccCCccccChHHhhCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhh
Confidence            22447899999999998744 89999999999999999999999999988888877777666554322111110000000


Q ss_pred             CCcccchh---------------hhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         137 TFPEWSNF---------------CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       137 ~~~~~~~~---------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ....|...               .........+..+.+||.+||+.||++|||++|+++||||+...
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          270 DRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             TEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             ccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence            00000000               00000122346789999999999999999999999999998754

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.96  E-value=2.7e-29  Score=191.12  Aligned_cols=179  Identities=27%  Similarity=0.432  Sum_probs=123.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccCCCC------------cEEEeecCCccccCCCccccccceecccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKPKSN------------IVKVADFGLARAFGVPVRIYTHEVVTLWYR   67 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp~~~------------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~   67 (197)
                      ..+++..+..++.||+.||+||          |||+|.            .+||+|||.+......   .....+|+.|+
T Consensus       126 ~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~  202 (373)
T 1q8y_A          126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH---YTNSIQTREYR  202 (373)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGC
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC---CCCCCCCcccc
Confidence            4599999999999999999999          777553            4699999999866432   23447899999


Q ss_pred             CchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC------hHHHHHHHHhhcCCCCCCCCCCCC---------CCC
Q psy6390          68 APEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS------EIDQLFRIFRVLTTPTEDNWPGVS---------KLP  132 (197)
Q Consensus        68 aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  132 (197)
                      |||++.+.. ++.++||||+||++|+|++|..||....      ..+.+..+...++.++...+....         ...
T Consensus       203 aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  281 (373)
T 1q8y_A          203 SPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL  281 (373)
T ss_dssp             CHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CB
T ss_pred             CcHHHhCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchh
Confidence            999998755 8999999999999999999999998654      455566666666655432110000         000


Q ss_pred             CCCCCCcccc-hhhhh---hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         133 DYKTTFPEWS-NFCLD---KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       133 ~~~~~~~~~~-~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                      ........+. .....   ......+..+.+||.+||+.||++|||++|+++||||++.....+
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~  345 (373)
T 1q8y_A          282 RNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEE  345 (373)
T ss_dssp             SSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCTT
T ss_pred             cccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccCccc
Confidence            0000000110 00000   111234568899999999999999999999999999998765544

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.96  E-value=1.1e-29  Score=190.33  Aligned_cols=154  Identities=23%  Similarity=0.359  Sum_probs=101.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++.++..++.|+++||+||         |||+|         ..+||+|||+++.............+|+.|+|||+
T Consensus       101 ~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~  180 (325)
T 3kn6_A          101 KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL  180 (325)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHH
Confidence            4699999999999999999999         77733         26899999999876554444455678999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh-------HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchh
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-------IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF  144 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (197)
                      +.+.. ++.++||||+||++|++++|..||.....       .+....+.......                        
T Consensus       181 ~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~------------------------  235 (325)
T 3kn6_A          181 LNQNG-YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF------------------------  235 (325)
T ss_dssp             ---CC-CCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC------------------------
T ss_pred             hcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC------------------------
Confidence            97654 89999999999999999999999986543       23333332211000                        


Q ss_pred             hhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       145 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                       ....+..++..+.+||.+||..||++|||++++++||||++...
T Consensus       236 -~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          236 -EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             -CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             -CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence             00112457899999999999999999999999999999987643

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.96  E-value=4.1e-29  Score=192.21  Aligned_cols=153  Identities=24%  Similarity=0.278  Sum_probs=124.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      .++++..++.++.||+.||+||         |||      .++.+||+|||+++....... .....+||+.|+|||++.
T Consensus       163 ~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~  242 (410)
T 3v8s_A          163 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK  242 (410)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhh
Confidence            4699999999999999999999         777      557889999999987654432 233568999999999997


Q ss_pred             CCCC---CCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          74 GSQR---YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        74 ~~~~---~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +...   ++.++|+||+||++|+|++|..||.+.+.......+.........                         ...
T Consensus       243 ~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-------------------------p~~  297 (410)
T 3v8s_A          243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF-------------------------PDD  297 (410)
T ss_dssp             TTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC-------------------------CTT
T ss_pred             ccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccC-------------------------CCc
Confidence            6332   678999999999999999999999999888887777642111000                         001


Q ss_pred             CCCCHhHHHHHHhhcccCCCC--CCCHHHHhcCcccCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPAT--RINAENALKHKYFADK  187 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~--R~s~~ell~hp~~~~~  187 (197)
                      ..++..+++||.+||..+|.+  |++++|+++||||++.
T Consensus       298 ~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          298 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             ccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            347899999999999999988  9999999999999975

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.96  E-value=4.6e-29  Score=195.10  Aligned_cols=148  Identities=22%  Similarity=0.345  Sum_probs=122.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.+++.++.||+.||+||         |||      .++.+||+|||++....... .....+||+.|+|||++.+
T Consensus       111 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~  189 (476)
T 2y94_A          111 GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRTSCGSPNYAAPEVISG  189 (476)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-CBCCCCSCSTTCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-cccccCCCcCeEChhhccC
Confidence            4699999999999999999999         777      55778999999998765432 2344578999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ....+.++||||+||++|+|++|..||...........+.......                             ...++
T Consensus       190 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~s  240 (476)
T 2y94_A          190 RLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYT-----------------------------PQYLN  240 (476)
T ss_dssp             CCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCC-----------------------------CTTCC
T ss_pred             CCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCC-----------------------------CccCC
Confidence            5545789999999999999999999999888777776665421110                             12367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ..+.+||.+||..||++|||++++++||||++.
T Consensus       241 ~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          241 PSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            899999999999999999999999999999764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.96  E-value=5.9e-29  Score=195.53  Aligned_cols=152  Identities=27%  Similarity=0.465  Sum_probs=122.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC---------CCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK---------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~---------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..++.++.||++||+||         |||+         ++.+||+|||+++....... ....+||+.|+|||+
T Consensus       116 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~  194 (486)
T 3mwu_A          116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEV  194 (486)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-----CCTTGGGGCCGGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc-cCCCcCCCCCCCHHH
Confidence            5699999999999999999999         7773         34689999999986654322 334578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+ . ++.++||||+||++|++++|..||.+.+..+....+.........                         ..+.
T Consensus       195 ~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~  247 (486)
T 3mwu_A          195 LRG-T-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL-------------------------PQWR  247 (486)
T ss_dssp             GGS-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCS-------------------------GGGG
T ss_pred             hCC-C-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC-------------------------cccC
Confidence            975 3 889999999999999999999999999888888777653222111                         1124


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .++..+.+||.+||+.||++|||++++++||||++...
T Consensus       248 ~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          248 TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             GSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence            47889999999999999999999999999999986544

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.96  E-value=1.9e-28  Score=180.00  Aligned_cols=155  Identities=25%  Similarity=0.382  Sum_probs=124.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|++.||+||         |+|+|         ..++|+|||.+........ .....+|+.|+|||.
T Consensus       100 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~  178 (284)
T 3kk8_A          100 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEV  178 (284)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB-CCCSCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc-ccCCCCCcCCcCchh
Confidence            4599999999999999999999         66633         3489999999977654332 234578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++||||+|++++++++|..||...........+.......+..                         ...
T Consensus       179 ~~~~~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~  232 (284)
T 3kk8_A          179 LKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP-------------------------EWD  232 (284)
T ss_dssp             HTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT-------------------------TTT
T ss_pred             hcCCC-CCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCch-------------------------hhc
Confidence            97754 8899999999999999999999999888877777665432221111                         113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      .++..+.+++.+||+.||++|||++|+++||||++..+..
T Consensus       233 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~  272 (284)
T 3kk8_A          233 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVA  272 (284)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGG
T ss_pred             ccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhHH
Confidence            4678999999999999999999999999999998765543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=4.3e-29  Score=187.18  Aligned_cols=179  Identities=27%  Similarity=0.566  Sum_probs=122.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC-------CCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK-------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~-------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      +.+++..++.++.|+++||+||         |||+       +..++|+|||.++....... .....++..|+|||.+.
T Consensus       125 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~~y~aPE~~~  203 (330)
T 3nsz_A          125 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLV  203 (330)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC-CCSCCSCGGGCCHHHHT
T ss_pred             HhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc-cccccccccccChhhhc
Confidence            4599999999999999999999         7773       33789999999986654332 33457899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCC-CChHHHHHHHHhhcCCCCCCCCC---CCCCCCCC-----CCCCcccchh
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQG-DSEIDQLFRIFRVLTTPTEDNWP---GVSKLPDY-----KTTFPEWSNF  144 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~  144 (197)
                      +...++.++||||+||++++|++|..||.. ....+.+..+....+.+....+.   .....+.+     ......+...
T Consensus       204 ~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (330)
T 3nsz_A          204 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF  283 (330)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGG
T ss_pred             CCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhh
Confidence            756689999999999999999999999854 44444444444433321100000   00000000     0000111111


Q ss_pred             hhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       145 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ........++..+.+||.+||+.||++|||++|+++||||+++..
T Consensus       284 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          284 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             CCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             ccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence            111222347899999999999999999999999999999998753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=9.1e-30  Score=195.08  Aligned_cols=172  Identities=28%  Similarity=0.398  Sum_probs=122.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccCCC------C------------------------------------
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKPKS------N------------------------------------   37 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp~~------~------------------------------------   37 (197)
                      ..+++..++.++.||++||+||          |||+|      +                                    
T Consensus       141 ~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (397)
T 1wak_A          141 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNF  220 (397)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccc
Confidence            4699999999999999999999          66633      1                                    


Q ss_pred             -------------cEEEeecCCccccCCCccccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCC
Q psy6390          38 -------------IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGD  104 (197)
Q Consensus        38 -------------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~  104 (197)
                                   .+||+|||.+......   .....+|+.|+|||++.+.. ++.++||||+||++|+|++|..||...
T Consensus       221 ~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~  296 (397)
T 1wak_A          221 LVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPH  296 (397)
T ss_dssp             SCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             cccccccccccccceEecccccccccccc---CccCCCCCcccCChhhcCCC-CCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence                         6899999999866432   23457899999999998755 899999999999999999999999765


Q ss_pred             C------hHHHHHHHHhhcCCCCCCCC----------CCCCCCCCCCCCCcccc-hhhhh---hccCCCCHhHHHHHHhh
Q psy6390         105 S------EIDQLFRIFRVLTTPTEDNW----------PGVSKLPDYKTTFPEWS-NFCLD---KHVKNLDQDGLDLLEKT  164 (197)
Q Consensus       105 ~------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~li~~~  164 (197)
                      .      ..+.+..+....+.++...+          .......... ....+. .....   ......+..+.+||.+|
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  375 (397)
T 1wak_A          297 SGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT-KLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPM  375 (397)
T ss_dssp             CCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC-CCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGG
T ss_pred             cccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc-ccCCcchhHhhhhhcccchhhHHHHHHHHHHH
Confidence            4      45666777776666543211          0000000000 000000 00000   01122346788999999


Q ss_pred             cccCCCCCCCHHHHhcCcccCC
Q psy6390         165 LIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       165 l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      |+.||++|||++|+++||||++
T Consensus       376 L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          376 LELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             GCSSGGGSCCHHHHHTSGGGGC
T ss_pred             hccChhhcCCHHHHhhCccccC
Confidence            9999999999999999999974

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.96  E-value=8.1e-29  Score=195.09  Aligned_cols=150  Identities=27%  Similarity=0.466  Sum_probs=123.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC---------CCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK---------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~---------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..++.++.||++||+||         |||+         +..+||+|||++....... .....+||+.|+|||+
T Consensus       131 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~  209 (494)
T 3lij_A          131 MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-KMKERLGTAYYIAPEV  209 (494)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-CBCCCCSCTTTCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-cccccCCCcCeeCHHH
Confidence            5699999999999999999999         7773         3458999999998765433 2334578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +..  .++.++||||+||++|+|++|..||.+....+....+.........                         ..+.
T Consensus       210 l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~  262 (494)
T 3lij_A          210 LRK--KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS-------------------------PEWK  262 (494)
T ss_dssp             HTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCS-------------------------GGGT
T ss_pred             Hcc--cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc-------------------------hhcc
Confidence            863  3889999999999999999999999999888888777654322211                         1124


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .++..+.+||.+||+.||++|||++++++||||++.
T Consensus       263 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          263 NVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             cCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence            578899999999999999999999999999999754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.96  E-value=1.6e-28  Score=185.66  Aligned_cols=153  Identities=24%  Similarity=0.349  Sum_probs=110.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC---------CCCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP---------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp---------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++.++..++.|+++||+||         |||         +++.+||+|||+++...... ......||+.|+|||+
T Consensus       143 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~  221 (349)
T 2w4o_A          143 GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV-LMKTVCGTPGYCAPEI  221 (349)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------------CGGGSCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc-ccccccCCCCccCHHH
Confidence            3589999999999999999999         666         26778999999998664332 2234578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHH-HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEID-QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++||||+||++|+|++|..||....... ....+........                         ....
T Consensus       222 ~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~-------------------------~~~~  275 (349)
T 2w4o_A          222 LRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI-------------------------SPWW  275 (349)
T ss_dssp             HTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCC-------------------------TTTT
T ss_pred             hcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccC-------------------------Cchh
Confidence            98754 8999999999999999999999998766554 3344433111110                         0111


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..++..+.+||.+||..||++|||++++++||||++...
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA  314 (349)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred             hhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence            447789999999999999999999999999999987643

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.96  E-value=6.4e-29  Score=185.74  Aligned_cols=155  Identities=23%  Similarity=0.351  Sum_probs=124.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC------C----cEEEeecCCccccCCCccccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS------N----IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~----~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ..+++..+..++.|+++||+||         |+|+|      +    .++|+|||.+........ .....+|+.|+|||
T Consensus       110 ~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~gt~~y~aPE  188 (321)
T 2a2a_A          110 ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPE  188 (321)
T ss_dssp             SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCC-CCCCCSCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCcccc-ccccCCCCCccCcc
Confidence            4589999999999999999999         77733      3    689999999987654322 23456899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      ++.+.. ++.++|+||+||++|++++|..||.+....+....+.......+                         ....
T Consensus       189 ~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~  242 (321)
T 2a2a_A          189 IVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD-------------------------EEFF  242 (321)
T ss_dssp             HHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC-------------------------HHHH
T ss_pred             cccCCC-CCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccC-------------------------hhhh
Confidence            997644 88999999999999999999999998888777766654221110                         1112


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ...+..+.++|.+||..||++|||++++++||||+......
T Consensus       243 ~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~~~~  283 (321)
T 2a2a_A          243 SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ  283 (321)
T ss_dssp             TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSSHHH
T ss_pred             cccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCCccc
Confidence            45788999999999999999999999999999998765433

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=6e-29  Score=191.04  Aligned_cols=152  Identities=22%  Similarity=0.312  Sum_probs=111.2

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------C---CCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------K---SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~---~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .+++.+++.++.||+.||.||         |||      .   ++.+||+|||+++...... .....++|+.|+|||++
T Consensus       157 ~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~  235 (400)
T 1nxk_A          157 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVAPEVL  235 (400)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC------------CTTCCGGGS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCC-ccccCCCCCCccCHhhc
Confidence            599999999999999999999         666      2   5779999999998665432 23355789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHH----HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEID----QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      .+.. ++.++||||+||++|+|++|..||.+.....    ....+.......+                         ..
T Consensus       236 ~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~-------------------------~~  289 (400)
T 1nxk_A          236 GPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP-------------------------NP  289 (400)
T ss_dssp             CCCC-SSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC-------------------------TT
T ss_pred             CCCC-CCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC-------------------------Cc
Confidence            7644 8999999999999999999999997654321    1222221100000                         01


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .+..++.++.+||.+||..||++|||++++++||||.+...
T Consensus       290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  330 (400)
T 1nxk_A          290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  330 (400)
T ss_dssp             TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTT
T ss_pred             ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCC
Confidence            11447889999999999999999999999999999976543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.96  E-value=3.9e-29  Score=186.20  Aligned_cols=144  Identities=25%  Similarity=0.242  Sum_probs=110.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|++.||+||         |||+      ++.+||+|||++........ .....||+.|+|||++.+
T Consensus       152 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~  230 (311)
T 3p1a_A          152 ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA-GEVQEGDPRYMAPELLQG  230 (311)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-------CCCCCGGGCCGGGGGT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCC-CcccCCCccccCHhHhcC
Confidence            4699999999999999999999         7774      46689999999987654322 334568999999999875


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                        .++.++||||+||+++++++|..++.....   ...+.....                           .......++
T Consensus       231 --~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~---------------------------~~~~~~~~~  278 (311)
T 3p1a_A          231 --SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYL---------------------------PPEFTAGLS  278 (311)
T ss_dssp             --CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCC---------------------------CHHHHTTSC
T ss_pred             --CCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCC---------------------------CcccccCCC
Confidence              488999999999999999999766654322   222211000                           011224578


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      ..+.+++.+||+.||++|||++|+++||||++
T Consensus       279 ~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          279 SELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            99999999999999999999999999999986

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.96  E-value=2.6e-28  Score=184.39  Aligned_cols=154  Identities=25%  Similarity=0.380  Sum_probs=123.4

Q ss_pred             HhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390           7 LEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         7 ~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      .....+++..+..++.|+++||+||         |||      +++.+||+|||++......    ....||+.|+|||+
T Consensus       146 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----~~~~gt~~y~aPE~  221 (348)
T 1u5q_A          146 VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NSFVGTPYWMAPEV  221 (348)
T ss_dssp             HHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB----CCCCSCGGGCCHHH
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC----CcccCCcceeCHhh
Confidence            3446799999999999999999999         777      5577899999999866432    23478999999999


Q ss_pred             hcC--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          72 LLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        72 ~~~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      +..  ...++.++||||+||++++|++|..||...+.......+........                           .
T Consensus       222 ~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~  274 (348)
T 1u5q_A          222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---------------------------Q  274 (348)
T ss_dssp             HHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC---------------------------C
T ss_pred             hccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC---------------------------C
Confidence            863  34488999999999999999999999998887777666554211100                           0


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ....+..+.++|.+||+.||++|||++++++||||.......
T Consensus       275 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~~~  316 (348)
T 1u5q_A          275 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT  316 (348)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCTT
T ss_pred             CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCCcc
Confidence            133578899999999999999999999999999998765443

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.96  E-value=5.7e-29  Score=191.53  Aligned_cols=153  Identities=22%  Similarity=0.281  Sum_probs=121.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.||+.||+||         |||      +++++||+|||+++....... .....+||+.|+|||++.
T Consensus       157 ~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~  236 (412)
T 2vd5_A          157 ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ  236 (412)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHh
Confidence            4699999999999999999999         777      557899999999987654332 223457899999999997


Q ss_pred             C------CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          74 G------SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        74 ~------~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      .      ...++.++|+||+||++|+|++|+.||.+.+..+....+........                        ..
T Consensus       237 ~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~p  292 (412)
T 2vd5_A          237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS------------------------LP  292 (412)
T ss_dssp             HHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC------------------------CC
T ss_pred             hcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcC------------------------CC
Confidence            3      23478999999999999999999999999888877777654211100                        00


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCC---CCHHHHhcCcccCCC
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATR---INAENALKHKYFADK  187 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R---~s~~ell~hp~~~~~  187 (197)
                      .....++.++++||.+||+ +|++|   ++++|+++||||+++
T Consensus       293 ~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          293 LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             ----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence            0113578999999999999 99998   499999999999875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.96  E-value=1e-28  Score=184.80  Aligned_cols=151  Identities=26%  Similarity=0.345  Sum_probs=116.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC--ccccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~--~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..++.++.|+++||+||         |||      .++.+||+|||++......  ........||+.|+|||++
T Consensus       100 ~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~  179 (323)
T 3tki_A          100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL  179 (323)
T ss_dssp             TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHh
Confidence            3599999999999999999999         777      4577899999999765322  1223345789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHH-HHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL-FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+....+.++||||+||++|+|++|..||......... ..........                           ....
T Consensus       180 ~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  232 (323)
T 3tki_A          180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---------------------------NPWK  232 (323)
T ss_dssp             HCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS---------------------------TTGG
T ss_pred             ccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC---------------------------Cccc
Confidence            87554577899999999999999999999876543222 2221110000                           0013


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .++..+.+|+.+||..||++|||++|+++||||++.
T Consensus       233 ~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          233 KIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence            467899999999999999999999999999999754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=3.7e-29  Score=183.38  Aligned_cols=151  Identities=23%  Similarity=0.378  Sum_probs=94.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.+..............+++.|+|||.+.+
T Consensus       107 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  186 (278)
T 3cok_A          107 KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR  186 (278)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcC
Confidence            5699999999999999999999         666      5577899999999876543333334578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..||...........+..                ..             ......++
T Consensus       187 ~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----------------~~-------------~~~~~~~~  236 (278)
T 3cok_A          187 SA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL----------------AD-------------YEMPSFLS  236 (278)
T ss_dssp             ------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS----------------SC-------------CCCCTTSC
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh----------------cc-------------cCCccccC
Confidence            44 78899999999999999999999976543322221100                00             00113467


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..+.+++.+||+.||++|||++++++||||.+....
T Consensus       237 ~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  272 (278)
T 3cok_A          237 IEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSST  272 (278)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC-----
T ss_pred             HHHHHHHHHHcccCHhhCCCHHHHhcCccccCCCCc
Confidence            899999999999999999999999999999865443

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.96  E-value=1.5e-28  Score=186.74  Aligned_cols=151  Identities=25%  Similarity=0.365  Sum_probs=121.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||.||         |+|      +++.++|+|||.+........ .....||+.|+|||++.+
T Consensus       195 ~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~-~~~~~gt~~y~aPE~~~~  273 (365)
T 2y7j_A          195 VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-LRELCGTPGYLAPEILKC  273 (365)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCC-BCCCCSCGGGCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCcc-cccCCCCCCccChhhccc
Confidence            4699999999999999999999         777      557889999999987654332 334578999999999863


Q ss_pred             -----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          75 -----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        75 -----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                           ...++.++||||+||++|+|++|..||...........+........                         ...
T Consensus       274 ~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~  328 (365)
T 2y7j_A          274 SMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFS-------------------------SPE  328 (365)
T ss_dssp             TTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-------------------------HHH
T ss_pred             cccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC-------------------------Ccc
Confidence                 22478899999999999999999999988877766666554211110                         111


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      +...+..+.++|.+||+.||++|||++++++||||+.
T Consensus       329 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          329 WDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            2457789999999999999999999999999999973

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.96  E-value=3.5e-29  Score=189.99  Aligned_cols=153  Identities=23%  Similarity=0.317  Sum_probs=105.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCCC------C--cEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPKS------N--IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~--~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..++++..++.++.|+++||+||         |||+|      +  .+||+|||+++...... ......||+.|+|||+
T Consensus       110 ~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~  188 (361)
T 3uc3_A          110 AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEV  188 (361)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------------CTTSCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-CCCCCcCCCCcCChhh
Confidence            35699999999999999999999         77733      2  38999999997543222 2234578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh----HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE----IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      +.+....+.++||||+||++|+|++|+.||.+...    ......+.......+                          
T Consensus       189 ~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--------------------------  242 (361)
T 3uc3_A          189 LLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP--------------------------  242 (361)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC--------------------------
T ss_pred             hcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC--------------------------
Confidence            98755334459999999999999999999987543    223333322111100                          


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                       ....++..+.+||.+||..||++|||++|+++||||.....
T Consensus       243 -~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~  283 (361)
T 3uc3_A          243 -DDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLP  283 (361)
T ss_dssp             -TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTCC
T ss_pred             -CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCCc
Confidence             01246789999999999999999999999999999965433

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.96  E-value=3.3e-28  Score=179.01  Aligned_cols=148  Identities=25%  Similarity=0.349  Sum_probs=113.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC---------CCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK---------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~---------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..++.++.|+++||+||         |||+         ++.++|+|||.+....... ......+|+.|+|||+
T Consensus       119 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~  197 (285)
T 3is5_A          119 KALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-HSTNAAGTALYMAPEV  197 (285)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----------CTTGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc-cCcCcccccCcCChHH
Confidence            5699999999999999999999         6663         3568999999997654432 2334578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +..  .++.++|+||+||+++++++|..||.+..................                          ....
T Consensus       198 ~~~--~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------------~~~~  249 (285)
T 3is5_A          198 FKR--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYA--------------------------VECR  249 (285)
T ss_dssp             HTT--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--------------------------C--C
T ss_pred             hcc--CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccc--------------------------cccC
Confidence            853  378999999999999999999999998877666655443211100                          0012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      ..+..+.+++.+||+.||++|||++|+++||||++
T Consensus       250 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          250 PLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             CCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            36788999999999999999999999999999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=3.9e-28  Score=180.78  Aligned_cols=162  Identities=22%  Similarity=0.357  Sum_probs=126.3

Q ss_pred             HHHhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCc
Q psy6390           5 IQLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAP   69 (197)
Q Consensus         5 ~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aP   69 (197)
                      ++.....+++..+..++.|++.||.||         |+|      .++.++|+|||.+..............++..|+||
T Consensus       115 ~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP  194 (314)
T 3com_A          115 IRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAP  194 (314)
T ss_dssp             HHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCH
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccCh
Confidence            333456799999999999999999999         666      55778999999997765443334455789999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      |.+.+.. ++.++|+||+|+++|++++|..||...........+........                          ..
T Consensus       195 E~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~  247 (314)
T 3com_A          195 EVIQEIG-YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTF--------------------------RK  247 (314)
T ss_dssp             HHHSSSC-BCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--------------------------SS
T ss_pred             hhcCCCC-CCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCccc--------------------------CC
Confidence            9997754 88999999999999999999999988776655544433111000                          00


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      ....+..+.+++.+||..||++|||++++++||||++......+
T Consensus       248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~~~~  291 (314)
T 3com_A          248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSIL  291 (314)
T ss_dssp             GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCGGGG
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcchHH
Confidence            12357889999999999999999999999999999987655443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=4.4e-29  Score=196.14  Aligned_cols=151  Identities=30%  Similarity=0.509  Sum_probs=123.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC---------CCCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP---------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp---------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..++.++.|+++||+||         |||         .++.+||+|||+++....... .....||+.|+|||+
T Consensus       121 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~  199 (484)
T 3nyv_A          121 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIAPEV  199 (484)
T ss_dssp             SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS-HHHHTTGGGTCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc-cccCCCCccccCcee
Confidence            5699999999999999999999         666         346789999999987654432 334578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+  .++.++||||+||++|+|++|..||.+.+..+....+.........                         ..+.
T Consensus       200 ~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~  252 (484)
T 3nyv_A          200 LHG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL-------------------------PQWK  252 (484)
T ss_dssp             HHT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS-------------------------GGGG
T ss_pred             ecC--CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCC-------------------------cccc
Confidence            975  3889999999999999999999999999888888777653222110                         1124


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .++..+.+||.+||+.||++|||++|+++||||+...
T Consensus       253 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          253 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             GSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             cCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence            4788999999999999999999999999999997543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.96  E-value=1.9e-28  Score=193.92  Aligned_cols=147  Identities=21%  Similarity=0.299  Sum_probs=118.5

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..++.++.||+.||+||         |||      .++.+||+|||+++............+||+.|+|||++.+.
T Consensus       285 ~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~  364 (543)
T 3c4z_A          285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE  364 (543)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCC
Confidence            599999999999999999999         777      55789999999998765544334445899999999999874


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCC----hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDS----EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      . ++.++|+||+||++|+|++|..||.+..    .......+......                             ...
T Consensus       365 ~-~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~-----------------------------~p~  414 (543)
T 3c4z_A          365 E-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT-----------------------------YPD  414 (543)
T ss_dssp             C-BCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC-----------------------------CCT
T ss_pred             C-CChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccC-----------------------------CCc
Confidence            4 8999999999999999999999998753    23334444321110                             113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      .++..+.+||.+||..||++||+     ++++++||||+++
T Consensus       415 ~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          415 KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence            46789999999999999999996     5899999999975

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.96  E-value=5.2e-28  Score=184.63  Aligned_cols=148  Identities=23%  Similarity=0.286  Sum_probs=116.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||+++...... .....+||+.|+|||++..
T Consensus       110 ~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~~~~~~gt~~Y~aPE~~~~  188 (384)
T 4fr4_A          110 VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-QITTMAGTKPYMAPEMFSS  188 (384)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-CBCCCCSCGGGCCGGGTCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC-ceeccCCCccccCCeeecc
Confidence            4699999999999999999999         777      55788999999998765432 2345678999999999964


Q ss_pred             C--CCCCCchhhhhhhHHHHHHHhCCCCCCCCC---hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          75 S--QRYSCPVDVWSIGCIFAEIATRKPLFQGDS---EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        75 ~--~~~~~~~Diws~g~~l~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .  ..++.++|+||+||++|+|++|..||....   .......+......                             .
T Consensus       189 ~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~-----------------------------~  239 (384)
T 4fr4_A          189 RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT-----------------------------Y  239 (384)
T ss_dssp             CSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC-----------------------------C
T ss_pred             CCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC-----------------------------C
Confidence            2  347889999999999999999999997543   22223333221111                             1


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCC-HHHHhcCcccCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRIN-AENALKHKYFADK  187 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s-~~ell~hp~~~~~  187 (197)
                      ...++..+.+||.+||+.||++||+ ++++++||||+++
T Consensus       240 p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          240 PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence            1346789999999999999999998 8999999999876

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.96  E-value=1.5e-28  Score=180.30  Aligned_cols=148  Identities=26%  Similarity=0.369  Sum_probs=118.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|++.||+||         |+|      .++.++|+|||.+.......  .....+++.|+|||.+.+
T Consensus       104 ~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~  181 (279)
T 3fdn_A          104 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--RTDLCGTLDYLPPEMIEG  181 (279)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC----------CCCCTTCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCccc--ccccCCCCCccCHhHhcc
Confidence            5699999999999999999999         666      55778999999986554332  234478999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++||||+|++++++++|..||...........+.......                             ....+
T Consensus       182 ~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~  231 (279)
T 3fdn_A          182 RM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----------------------------PDFVT  231 (279)
T ss_dssp             CC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC-----------------------------CTTSC
T ss_pred             CC-CCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCC-----------------------------CCcCC
Confidence            44 7899999999999999999999999888877777765432111                             13367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+.+||.+||+.||++|||++|+++||||++...
T Consensus       232 ~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          232 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence            88999999999999999999999999999976543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=1.2e-28  Score=182.55  Aligned_cols=160  Identities=22%  Similarity=0.311  Sum_probs=122.0

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..+..++.|+++||.||         |+|      .++.++|+|||.+..............++..|+|||.+.
T Consensus       111 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  190 (302)
T 2j7t_A          111 DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVM  190 (302)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeec
Confidence            45699999999999999999999         666      457789999998754322212223456899999999984


Q ss_pred             ----CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 ----GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ----~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                          ....++.++|+||+|++++++++|..||...+.......+........                          ..
T Consensus       191 ~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~  244 (302)
T 2j7t_A          191 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL--------------------------LT  244 (302)
T ss_dssp             HHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--------------------------SS
T ss_pred             cccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc--------------------------CC
Confidence                234478999999999999999999999998887766655544211100                          00


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhh
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA  194 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~  194 (197)
                      ....+..+.+++.+||..||++|||++++++||||++......+.
T Consensus       245 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~~  289 (302)
T 2j7t_A          245 PSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALR  289 (302)
T ss_dssp             GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCCHHHH
T ss_pred             ccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccchhHH
Confidence            133578899999999999999999999999999999987765544

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.96  E-value=9.8e-29  Score=189.25  Aligned_cols=180  Identities=17%  Similarity=0.170  Sum_probs=115.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-------cccccceecccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-------RIYTHEVVTLWYR   67 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-------~~~~~~~~~~~y~   67 (197)
                      ..+++..++.++.||+.||+||         |||      .++.+||+|||.+.......       .......+|+.|+
T Consensus       123 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  202 (389)
T 3gni_B          123 DGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL  202 (389)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGS
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccccccccccccccccccccccc
Confidence            5699999999999999999999         777      45778999999886542211       1122347789999


Q ss_pred             CchhhcCC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC--------CCCCCCCC---------C
Q psy6390          68 APEVLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTP--------TEDNWPGV---------S  129 (197)
Q Consensus        68 aPE~~~~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~---------~  129 (197)
                      |||++.+. ..++.++||||+||++|+|++|..||.+.+.......+.......        ........         .
T Consensus       203 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (389)
T 3gni_B          203 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLS  282 (389)
T ss_dssp             CHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------------------------------
T ss_pred             CHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccc
Confidence            99999763 448899999999999999999999998766554443322111000        00000000         0


Q ss_pred             CCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         130 KLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .........+.............++..+.+||.+||+.||++|||++|+++||||++...
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          283 DSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             -----------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             cccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence            000000000000111112233567899999999999999999999999999999987653

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=1.3e-28  Score=185.65  Aligned_cols=153  Identities=24%  Similarity=0.334  Sum_probs=118.9

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccCCC------C--cEEEeecCCccccCCC----ccccccceeccceeCch
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKPKS------N--IVKVADFGLARAFGVP----VRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp~~------~--~vkl~Dfg~s~~~~~~----~~~~~~~~~~~~y~aPE   70 (197)
                      +++..++.++.|+++||+||         |||+|      +  .+||+|||.++.....    ........+|+.|+|||
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  244 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE  244 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCch
Confidence            57888999999999999999         67732      3  7899999999865321    11233457899999999


Q ss_pred             hhcCC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      ++.+. ..++.++||||+||++|+|++|..||.+....+....+.........                         ..
T Consensus       245 ~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~  299 (345)
T 3hko_A          245 VLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN-------------------------PN  299 (345)
T ss_dssp             HHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTS-------------------------GG
T ss_pred             hhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCC-------------------------cc
Confidence            99752 44889999999999999999999999998888877776653222110                         11


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ...++..+.++|.+||+.||++|||+.++++||||++..+
T Consensus       300 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          300 YNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             cccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence            1336789999999999999999999999999999988754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.95  E-value=1.3e-28  Score=180.42  Aligned_cols=153  Identities=25%  Similarity=0.409  Sum_probs=122.6

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC---------CCCcEEEeecCCccccCCCccccccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP---------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp---------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ...+++..+..++.|+++||+||         |+|         .++.++|+|||.+........ .....+|+.|+|||
T Consensus       100 ~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~t~~y~aPE  178 (277)
T 3f3z_A          100 KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKVGTPYYVSPQ  178 (277)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC-BCCCCSCTTTCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc-hhccCCCCCccChH
Confidence            35689999999999999999999         555         446689999999987654332 33457899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .+.+ . ++.++|+||+|++++++++|..||...........+.......+                         ....
T Consensus       179 ~~~~-~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~  231 (277)
T 3f3z_A          179 VLEG-L-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFP-------------------------EKDW  231 (277)
T ss_dssp             HHTT-C-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-------------------------HHHH
T ss_pred             Hhcc-c-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC-------------------------chhh
Confidence            9864 3 78999999999999999999999999888777776655322211                         1111


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..++..+.+++.+||+.||++|||+.++++||||++...
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          232 LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred             hcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence            357889999999999999999999999999999976433

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.95  E-value=2.7e-29  Score=187.27  Aligned_cols=179  Identities=28%  Similarity=0.544  Sum_probs=126.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCc---cccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPV---RIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~---~~~~~~~~~~~y~aPE   70 (197)
                      .++++..++.++.|+++||+||         |||       +++.+||+|||.++......   .......++..|+|||
T Consensus       115 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (320)
T 2i6l_A          115 GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR  194 (320)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcH
Confidence            4689999999999999999999         666       45678999999998664321   1223345688999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC-CCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL-PDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  149 (197)
                      .+.+...++.++|+||+||++|++++|..||.+.........+.................. +.+...............
T Consensus       195 ~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (320)
T 2i6l_A          195 LLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQL  274 (320)
T ss_dssp             HHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHH
T ss_pred             HhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHh
Confidence            9977555899999999999999999999999998888777777665433222111000000 000000000000111223


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .+.++..+.++|.+||+.||++|||++++++||||+...
T Consensus       275 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          275 LPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             STTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             cchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            356889999999999999999999999999999998653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.95  E-value=4e-28  Score=185.93  Aligned_cols=152  Identities=26%  Similarity=0.364  Sum_probs=113.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC-----CCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK-----SNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~-----~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++.+++.++.||+.||+||         |||+     ++.+||+|||+++.......  .....+||+.|+|||++.
T Consensus       150 ~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  229 (390)
T 2zmd_A          150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK  229 (390)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhh
Confidence            4689999999999999999999         7774     46789999999987644321  233457899999999986


Q ss_pred             CC----------CCCCCchhhhhhhHHHHHHHhCCCCCCCCCh-HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy6390          74 GS----------QRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS  142 (197)
Q Consensus        74 ~~----------~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (197)
                      +.          ..++.++||||+||++|+|++|..||..... ...+..+.......                      
T Consensus       230 ~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~----------------------  287 (390)
T 2zmd_A          230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI----------------------  287 (390)
T ss_dssp             CC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC----------------------
T ss_pred             hccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC----------------------
Confidence            41          2478899999999999999999999987543 33333333210000                      


Q ss_pred             hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       143 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                           ......+..+.+||.+||+.||++|||++|+++||||+...
T Consensus       288 -----~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          288 -----EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             -----CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             -----CCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence                 00122467899999999999999999999999999997554

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.95  E-value=4.3e-29  Score=192.94  Aligned_cols=159  Identities=26%  Similarity=0.406  Sum_probs=112.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..++.++.|++.||+||         |||+|         ..+||+|||+++...... ......||+.|+|||+
T Consensus       234 ~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~  312 (419)
T 3i6u_A          234 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-LMRTLCGTPTYLAPEV  312 (419)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC------------CTTCCTTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCc-cccccCCCCCccCcee
Confidence            4699999999999999999999         77733         348999999998765432 2334578999999999


Q ss_pred             hcC--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          72 LLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        72 ~~~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      +.+  ...++.++||||+||++|+|++|..||...................                        .....
T Consensus       313 ~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~------------------------~~~~~  368 (419)
T 3i6u_A          313 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN------------------------FIPEV  368 (419)
T ss_dssp             TC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC------------------------CCHHH
T ss_pred             eecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC------------------------CCchh
Confidence            863  3447789999999999999999999997654332222221110000                        01122


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      ...++..+.+||.+||+.||++|||++|+++||||++..-...+
T Consensus       369 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~~~  412 (419)
T 3i6u_A          369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF  412 (419)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHHHHHHH
T ss_pred             hcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChhHHHHH
Confidence            24578899999999999999999999999999999875443333

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.95  E-value=5.6e-28  Score=180.81  Aligned_cols=155  Identities=23%  Similarity=0.313  Sum_probs=115.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |+|      +++.++|+|||.+..............+++.|+|||++..
T Consensus       124 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  203 (326)
T 2x7f_A          124 NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC  203 (326)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhcc
Confidence            4699999999999999999999         666      5677899999999876543333344578999999999862


Q ss_pred             ----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          75 ----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        75 ----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                          ...++.++||||+||++|++++|..||...........+.......                           ...
T Consensus       204 ~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~  256 (326)
T 2x7f_A          204 DENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR---------------------------LKS  256 (326)
T ss_dssp             -------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC---------------------------CSC
T ss_pred             ccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccc---------------------------CCc
Confidence                2347889999999999999999999998887766665544321100                           001


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ...+..+.++|.+||..||++||+++++++||||++.....
T Consensus       257 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~~  297 (326)
T 2x7f_A          257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNER  297 (326)
T ss_dssp             SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTTHH
T ss_pred             cccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcccc
Confidence            34678999999999999999999999999999999775543

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.95  E-value=1.4e-28  Score=182.12  Aligned_cols=167  Identities=20%  Similarity=0.285  Sum_probs=114.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-----ccccceeccceeCc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-----IYTHEVVTLWYRAP   69 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-----~~~~~~~~~~y~aP   69 (197)
                      ..+++..+..++.|+++||+||         |+|      +++.++|+|||.+........     ......+|+.|+||
T Consensus       116 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (303)
T 2vwi_A          116 GVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP  195 (303)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCH
Confidence            3499999999999999999999         666      557789999999876543211     12234689999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      |++.+...++.++|+||+||+++++++|..||......................                   .......
T Consensus       196 E~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~  256 (303)
T 2vwi_A          196 EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET-------------------GVQDKEM  256 (303)
T ss_dssp             HHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC------------------------CC
T ss_pred             HHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc-------------------ccccchh
Confidence            998764447899999999999999999999998877655544333211110000                   0001122


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhhc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE  195 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~~  195 (197)
                      ...++..+.+++.+||+.||++|||++++++||||++..+.+-+++
T Consensus       257 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~q~  302 (303)
T 2vwi_A          257 LKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQE  302 (303)
T ss_dssp             CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----------
T ss_pred             hhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCCCccccc
Confidence            2457889999999999999999999999999999998876655544

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.95  E-value=2.6e-28  Score=183.49  Aligned_cols=145  Identities=19%  Similarity=0.265  Sum_probs=115.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||+||         |||      +++.+||+|||.+........ .....||+.|+|||++.+
T Consensus       125 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~  203 (335)
T 3dls_A          125 PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL-FYTFCGTIEYCAPEVLMG  203 (335)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCC-BCEECSCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCc-eeccCCCccccChhhhcC
Confidence            3699999999999999999999         777      557789999999987654432 234578999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ....+.++||||+||++|++++|..||......      ..   ..                          ......++
T Consensus       204 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~---~~--------------------------~~~~~~~~  248 (335)
T 3dls_A          204 NPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VE---AA--------------------------IHPPYLVS  248 (335)
T ss_dssp             CCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TT---TC--------------------------CCCSSCCC
T ss_pred             CCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hh---hc--------------------------cCCCcccC
Confidence            554478999999999999999999999652210      00   00                          00113367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..+.+||.+||+.||++|||++++++||||++....
T Consensus       249 ~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~~  284 (335)
T 3dls_A          249 KELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNL  284 (335)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCCCG
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCccccCCccc
Confidence            899999999999999999999999999999875543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.95  E-value=2.3e-28  Score=192.97  Aligned_cols=152  Identities=25%  Similarity=0.397  Sum_probs=124.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.||+.||+||         |||+|         ..+||+|||++........ .....||+.|+|||+
T Consensus       141 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~  219 (504)
T 3q5i_A          141 HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRLGTAYYIAPEV  219 (504)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSC-BCCCCSCTTTCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCc-cccccCCcCCCCHHH
Confidence            5699999999999999999999         77733         2589999999987654332 334578999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+  .++.++||||+||++|+|++|..||.+.+..+....+........                         ...+.
T Consensus       220 ~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~  272 (504)
T 3q5i_A          220 LKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD-------------------------FNDWK  272 (504)
T ss_dssp             HTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-------------------------HHHHT
T ss_pred             hcc--CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-------------------------ccccC
Confidence            863  388999999999999999999999999988888877765321111                         11225


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .++..+.+||.+||..||++|||++|+++||||+...+
T Consensus       273 ~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          273 NISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             CCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence            57899999999999999999999999999999986544

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.95  E-value=4.5e-28  Score=182.19  Aligned_cols=150  Identities=26%  Similarity=0.331  Sum_probs=122.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.++..++.|+++||+||         |+|      +++.++|+|||.+..............++..|+|||++.+
T Consensus       136 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  215 (335)
T 2owb_A          136 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK  215 (335)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhcc
Confidence            4699999999999999999999         666      4567899999999876544333445578999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++||||+|+++|+|++|..||......+....+......                             ....++
T Consensus       216 ~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~  265 (335)
T 2owb_A          216 KG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-----------------------------IPKHIN  265 (335)
T ss_dssp             SC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC-----------------------------CCTTSC
T ss_pred             CC-CCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCC-----------------------------CCccCC
Confidence            44 789999999999999999999999988777666555432111                             013367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+.++|.+||+.||++|||++++++||||++...
T Consensus       266 ~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          266 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence            88999999999999999999999999999987654

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.95  E-value=6e-28  Score=176.69  Aligned_cols=151  Identities=23%  Similarity=0.310  Sum_probs=113.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      .++.++|+|||.+....... ......+++.|+|||.+.+
T Consensus       106 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~  184 (276)
T 2h6d_A          106 GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRTSCGSPNYAAPEVISG  184 (276)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--------------CCTGGGTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc-ceecccCCccccCHHHHcC
Confidence            4689999999999999999999         666      55778999999998765432 2234578999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ....+.++|+||+|++++++++|..||...........+......                             ....++
T Consensus       185 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~  235 (276)
T 2h6d_A          185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFY-----------------------------IPEYLN  235 (276)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-----------------------------CCTTSC
T ss_pred             CCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc-----------------------------CchhcC
Confidence            553468999999999999999999999888776666655432111                             012356


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..+.+++.+||+.||++|||++++++||||++....
T Consensus       236 ~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~~  271 (276)
T 2h6d_A          236 RSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPS  271 (276)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCCG
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHhChhhccCchh
Confidence            889999999999999999999999999999876543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.95  E-value=3.7e-28  Score=183.18  Aligned_cols=152  Identities=26%  Similarity=0.373  Sum_probs=111.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC-----CCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK-----SNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~-----~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++.++..++.|+++||+||         |||+     ++.+||+|||+++.......  ......||+.|+|||++.
T Consensus       103 ~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  182 (343)
T 3dbq_A          103 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK  182 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC------------CCCCSSCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHh
Confidence            4699999999999999999999         7774     46689999999987654322  223457899999999985


Q ss_pred             C----------CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH-HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy6390          74 G----------SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI-DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS  142 (197)
Q Consensus        74 ~----------~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (197)
                      +          ...++.++||||+||++|+|++|..||...... .....+..   .....                   
T Consensus       183 ~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~---~~~~~-------------------  240 (343)
T 3dbq_A          183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID---PNHEI-------------------  240 (343)
T ss_dssp             HCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC---TTSCC-------------------
T ss_pred             hccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhc---CCccc-------------------
Confidence            3          134788999999999999999999999875432 33333321   10000                   


Q ss_pred             hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       143 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                           ......+..+.+++.+||+.||++|||++++++||||+...
T Consensus       241 -----~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  281 (343)
T 3dbq_A          241 -----EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  281 (343)
T ss_dssp             -----CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             -----CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence                 00123457899999999999999999999999999997543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=4.8e-28  Score=192.33  Aligned_cols=146  Identities=21%  Similarity=0.287  Sum_probs=116.9

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..++.++.||+.||+||         |||      .++.+||+|||+++....... ....+||+.|+|||++.+.
T Consensus       282 ~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~-~~~~~GT~~Y~APEvl~~~  360 (576)
T 2acx_A          282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRVGTVGYMAPEVVKNE  360 (576)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-EECCCSCGGGCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCcc-ccccCCCccccCHHHHcCC
Confidence            499999999999999999999         777      557899999999987654332 2345889999999999874


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCCh----HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSE----IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      . ++.++|+||+||++|+|++|..||.....    ......+.....                             ....
T Consensus       361 ~-~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~-----------------------------~~p~  410 (576)
T 2acx_A          361 R-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE-----------------------------EYSE  410 (576)
T ss_dssp             E-ESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC-----------------------------CCCT
T ss_pred             C-CCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc-----------------------------cCCc
Confidence            4 88999999999999999999999987532    222333322100                             0013


Q ss_pred             CCCHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      .++..+.+||.+||+.||++||     +++|+++||||+++
T Consensus       411 ~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          411 RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence            4678999999999999999999     89999999999975

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.95  E-value=1.5e-27  Score=176.37  Aligned_cols=152  Identities=23%  Similarity=0.327  Sum_probs=121.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc-
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL-   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~-   73 (197)
                      ..+++..+..++.|++.||+||         |+|      .++.++|+|||.+........ .....+++.|+|||++. 
T Consensus       119 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~  197 (298)
T 1phk_A          119 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREVCGTPSYLAPEIIEC  197 (298)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCC-BCCCCSCGGGCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcc-cccccCCccccCHHHhcc
Confidence            4699999999999999999999         666      557789999999987654322 23457899999999985 


Q ss_pred             ----CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 ----GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ----~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                          ....++.++|+||+|++++++++|..||...........+.........                         ..
T Consensus       198 ~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~  252 (298)
T 1phk_A          198 SMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS-------------------------PE  252 (298)
T ss_dssp             HHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT-------------------------TT
T ss_pred             ccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCc-------------------------cc
Confidence                2334788999999999999999999999888877766665542211110                         01


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ...++..+.+++.+||+.||++|||++++++||||++.
T Consensus       253 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (298)
T 1phk_A          253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  290 (298)
T ss_dssp             GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhc
Confidence            13467899999999999999999999999999999976

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.95  E-value=8.4e-28  Score=178.33  Aligned_cols=151  Identities=25%  Similarity=0.339  Sum_probs=121.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC---------CCCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP---------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp---------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|++.||+||         |+|         +++.++|+|||.+......  ......+++.|+|||.
T Consensus       101 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~  178 (304)
T 2jam_A          101 GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYVAPEV  178 (304)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--TTHHHHSCCCBCCTTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--ccccccCCCCccChHH
Confidence            4689999999999999999999         555         3456899999999755432  1233468999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++|+||+||+++++++|..||...........+.........                         ....
T Consensus       179 ~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~  232 (304)
T 2jam_A          179 LAQKP-YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFES-------------------------PFWD  232 (304)
T ss_dssp             BSSCS-CCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCT-------------------------TTTT
T ss_pred             hccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc-------------------------cccc
Confidence            97644 889999999999999999999999988877777666543221110                         1114


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .++..+.++|.+||..||++|||++++++||||++..
T Consensus       233 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          233 DISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             TSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence            4778999999999999999999999999999998654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.95  E-value=6.1e-28  Score=178.24  Aligned_cols=150  Identities=26%  Similarity=0.331  Sum_probs=122.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.++..++.|+++||+||         |+|      +++.++|+|||.+..............+++.|+|||.+.+
T Consensus       110 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (294)
T 2rku_A          110 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK  189 (294)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhcc
Confidence            4699999999999999999999         666      4577899999999876544333445578999999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..||......+....+......                             ....++
T Consensus       190 ~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~  239 (294)
T 2rku_A          190 KG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-----------------------------IPKHIN  239 (294)
T ss_dssp             SC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC-----------------------------CCTTSC
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCC-----------------------------CccccC
Confidence            44 789999999999999999999999988777666555431100                             013367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+.+++.+||+.||++|||++++++||||++...
T Consensus       240 ~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          240 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  274 (294)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence            88999999999999999999999999999986543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.95  E-value=7.7e-28  Score=176.88  Aligned_cols=146  Identities=25%  Similarity=0.351  Sum_probs=119.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      .++.++|+|||.+.......  .....+++.|+|||.+.+
T Consensus       109 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~  186 (284)
T 2vgo_A          109 GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR--RRTMCGTLDYLPPEMIEG  186 (284)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--BCCCCSCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccc--cccccCCCCcCCHHHhcc
Confidence            4699999999999999999999         666      55778999999987654322  234578999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..||......+....+......                             ....++
T Consensus       187 ~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~  236 (284)
T 2vgo_A          187 KT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK-----------------------------FPPFLS  236 (284)
T ss_dssp             CC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC-----------------------------CCTTSC
T ss_pred             CC-CCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccC-----------------------------CCCcCC
Confidence            44 789999999999999999999999988877766665432110                             013367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ..+.++|.+||..||++|||++++++||||++.
T Consensus       237 ~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          237 DGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             HHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence            899999999999999999999999999999754

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.95  E-value=1.2e-28  Score=187.75  Aligned_cols=155  Identities=13%  Similarity=0.068  Sum_probs=110.5

Q ss_pred             hcCCHHHH------HHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeC
Q psy6390          10 EQVGTYQV------KITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRA   68 (197)
Q Consensus        10 ~~l~~~~~------~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~a   68 (197)
                      ..+++...      ..++.||++||+||         |||      +++.+||+|||+++..+...   ....+|+.|+|
T Consensus       183 ~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~t~~y~a  259 (371)
T 3q60_A          183 FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG---PASSVPVTYAP  259 (371)
T ss_dssp             HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE---EGGGSCGGGCC
T ss_pred             cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCc---cCccCCcCCcC
Confidence            34555555      57779999999999         777      55678999999998765322   13456799999


Q ss_pred             chhhcC-CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          69 PEVLLG-SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        69 PE~~~~-~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      ||++.+ ...++.++||||+||++|+|++|..||.......             ...+..........       .....
T Consensus       260 PE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-------------~~~~~~~~~~~~~~-------~~~~~  319 (371)
T 3q60_A          260 REFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI-------------KGSWKRPSLRVPGT-------DSLAF  319 (371)
T ss_dssp             HHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTC-------------TTCCCBCCTTSCCC-------CSCCC
T ss_pred             hhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccc-------------ccchhhhhhhhccc-------cccch
Confidence            999975 2348999999999999999999999997653210             00000000000000       00001


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .....++..+.+||.+||+.||++|||++++++||||++.
T Consensus       320 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          320 GSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             TTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             hhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence            1124678999999999999999999999999999999865

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.95  E-value=2.1e-28  Score=182.41  Aligned_cols=154  Identities=23%  Similarity=0.295  Sum_probs=108.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC------C---cEEEeecCCccccCCCcc-------ccccceecc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS------N---IVKVADFGLARAFGVPVR-------IYTHEVVTL   64 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~---~vkl~Dfg~s~~~~~~~~-------~~~~~~~~~   64 (197)
                      ..+++..++.++.|+++||+||         |||+|      +   .+||+|||++........       ......||+
T Consensus       106 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~  185 (316)
T 2ac3_A          106 RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA  185 (316)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCc
Confidence            4699999999999999999999         77743      2   289999999876532111       122345899


Q ss_pred             ceeCchhhcCC----CCCCCchhhhhhhHHHHHHHhCCCCCCCCCh---------------HHHHHHHHhhcCCCCCCCC
Q psy6390          65 WYRAPEVLLGS----QRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---------------IDQLFRIFRVLTTPTEDNW  125 (197)
Q Consensus        65 ~y~aPE~~~~~----~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~  125 (197)
                      .|+|||++...    ..++.++||||+||++|+|++|..||.+...               ......+.......     
T Consensus       186 ~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----  260 (316)
T 2ac3_A          186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEF-----  260 (316)
T ss_dssp             GGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCC-----
T ss_pred             CccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCccc-----
Confidence            99999998641    2367899999999999999999999976532               11122222110000     


Q ss_pred             CCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         126 PGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                                          .......++..+.+||.+||+.||++|||++|+++||||++..
T Consensus       261 --------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          261 --------------------PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             --------------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             --------------------CchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence                                0011245788999999999999999999999999999998754

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=5.7e-28  Score=177.91  Aligned_cols=149  Identities=19%  Similarity=0.259  Sum_probs=106.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.|++.||+||          |||      .++.+||+|||.+........ .....+|+.|+|||.+.
T Consensus       104 ~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~t~~y~aPE~~~  182 (290)
T 3fme_A          104 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-KDIDAGCKPYMAPERIN  182 (290)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------------CCCCCCSCHHHHS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc-ccccCCCccccChhhcC
Confidence            4699999999999999999999          666      446789999999976644322 23346899999999973


Q ss_pred             ---CCCCCCCchhhhhhhHHHHHHHhCCCCCCCC-ChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          74 ---GSQRYSCPVDVWSIGCIFAEIATRKPLFQGD-SEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        74 ---~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                         ....++.++|+||+||+++++++|..||... .................                           .
T Consensus       183 ~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~  235 (290)
T 3fme_A          183 PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---------------------------P  235 (290)
T ss_dssp             CCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC---------------------------C
T ss_pred             hhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCc---------------------------c
Confidence               3344889999999999999999999999864 34444444333211100                           0


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      ....+..+.+++.+||+.||++|||++++++||||+.
T Consensus       236 ~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence            0336789999999999999999999999999999974

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.95  E-value=1.2e-27  Score=177.33  Aligned_cols=151  Identities=26%  Similarity=0.336  Sum_probs=122.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++..+..++.|++.||+||         |+|      .++.++|+|||.+..............+++.|+|||.+.+
T Consensus       114 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  193 (303)
T 3a7i_A          114 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ  193 (303)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhc
Confidence            4699999999999999999999         666      5577899999999876554333445578999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..||...........+......                            .....++
T Consensus       194 ~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  244 (303)
T 3a7i_A          194 SA-YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP----------------------------TLEGNYS  244 (303)
T ss_dssp             CC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC----------------------------CCCSSCC
T ss_pred             CC-CCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCC----------------------------CCccccC
Confidence            44 789999999999999999999999888776666554431100                            0113467


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..+.+++.+||+.||++|||++++++||||.....
T Consensus       245 ~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  279 (303)
T 3a7i_A          245 KPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK  279 (303)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence            88999999999999999999999999999965443

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.95  E-value=2.4e-27  Score=174.76  Aligned_cols=148  Identities=21%  Similarity=0.280  Sum_probs=114.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-----------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-----------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-----------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..++.++.|+++||+||           |+|       +++.++|+|||.+.......  .....+|+.|+|||+
T Consensus       124 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~t~~y~aPE~  201 (290)
T 1t4h_A          124 KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF--AKAVIGTPEFMAPEM  201 (290)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS--BEESCSSCCCCCGGG
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc--cccccCCcCcCCHHH
Confidence            5699999999999999999998           555       45789999999997554332  233468999999998


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+ . ++.++|+||+||+++++++|..||..................+                          .....
T Consensus       202 ~~~-~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--------------------------~~~~~  253 (290)
T 1t4h_A          202 YEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--------------------------ASFDK  253 (290)
T ss_dssp             GGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--------------------------GGGGG
T ss_pred             Hhc-c-CCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc--------------------------cccCC
Confidence            864 3 7899999999999999999999998866555444332211000                          01113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ..+..+.++|.+||+.||++|||++++++||||++.
T Consensus       254 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          254 VAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence            456789999999999999999999999999999875

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.95  E-value=2.6e-27  Score=175.58  Aligned_cols=152  Identities=22%  Similarity=0.257  Sum_probs=121.2

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC--ccccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~--~~~~~~~~~~~~y~aPE~   71 (197)
                      ...+++..+..++.|+++||+||         |+|      .++.++|+|||.+......  ........++..|+|||+
T Consensus       103 ~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  182 (305)
T 2wtk_C          103 EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI  182 (305)
T ss_dssp             TCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHH
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhh
Confidence            35699999999999999999999         666      5577899999999866432  222334568999999999


Q ss_pred             hcCCC-CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQ-RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~-~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ..+.++||||+|+++|++++|..||...........+......                             ..
T Consensus       183 ~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~-----------------------------~~  233 (305)
T 2wtk_C          183 ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA-----------------------------IP  233 (305)
T ss_dssp             HTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC-----------------------------CC
T ss_pred             ccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCC-----------------------------CC
Confidence            97533 2467999999999999999999999988877666665442111                             11


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ..++..+.+++.+||+.||++|||++++++||||++...
T Consensus       234 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          234 GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence            346788999999999999999999999999999986644

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.95  E-value=1.8e-27  Score=174.04  Aligned_cols=153  Identities=25%  Similarity=0.339  Sum_probs=116.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|+++||+||         |+|      .++.++|+|||.+.......  .......++..|+|||.+
T Consensus       100 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (276)
T 2yex_A          100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL  179 (276)
T ss_dssp             TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGG
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHH
Confidence            3589999999999999999999         666      55788999999997653221  123345689999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHH-HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEID-QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+....+.++|+||+|++++++++|..||....... ....+......                           .....
T Consensus       180 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~  232 (276)
T 2yex_A          180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY---------------------------LNPWK  232 (276)
T ss_dssp             TCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT---------------------------STTGG
T ss_pred             hcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc---------------------------cCchh
Confidence            765534778999999999999999999998765432 22222210000                           00013


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .++..+.+++.+||+.||++|||++++++||||++...
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          233 KIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             hcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence            46789999999999999999999999999999987654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.95  E-value=4.4e-29  Score=190.48  Aligned_cols=138  Identities=17%  Similarity=0.149  Sum_probs=106.8

Q ss_pred             HHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC---
Q psy6390          14 TYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS---   75 (197)
Q Consensus        14 ~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~---   75 (197)
                      +..+..++.||++||+||         |||      +++.+||+|||+++.....   .....| +.|+|||++.+.   
T Consensus       205 ~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~  280 (377)
T 3byv_A          205 HHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---VVSSVS-RGFEPPELEARRATI  280 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE---EECCCC-TTCCCHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc---ccCCCC-cCccChhhhcccccc
Confidence            488889999999999999         777      5578899999999864432   234466 999999999865   


Q ss_pred             -------CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          76 -------QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        76 -------~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                             ..++.++||||+||++|+|++|..||.+.........+                                 ..
T Consensus       281 ~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~---------------------------------~~  327 (377)
T 3byv_A          281 SYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI---------------------------------FR  327 (377)
T ss_dssp             HHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGG---------------------------------GS
T ss_pred             cccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhh---------------------------------hh
Confidence                   14889999999999999999999999654322111111                                 01


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ....++..+.+||.+||+.||++|||+.++++||||++..
T Consensus       328 ~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  367 (377)
T 3byv_A          328 SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR  367 (377)
T ss_dssp             SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred             hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence            1145788999999999999999999999999999998653

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.95  E-value=1.1e-27  Score=175.92  Aligned_cols=151  Identities=21%  Similarity=0.329  Sum_probs=118.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC------C----cEEEeecCCccccCCCccccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS------N----IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~----~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ..+++..+..++.|+++||.||         |+|+|      +    .++|+|||.+........ .....+++.|+|||
T Consensus       103 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE  181 (283)
T 3bhy_A          103 ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPE  181 (283)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---------CCCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCc-ccccCCCcCccCcc
Confidence            4699999999999999999999         66633      2    689999999987644322 23446899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .+.+.. ++.++|+||+|++++++++|..||...........+.......                         .....
T Consensus       182 ~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~  235 (283)
T 3bhy_A          182 IVNYEP-LGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF-------------------------DEEYF  235 (283)
T ss_dssp             HHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC-------------------------CHHHH
T ss_pred             eecCCC-CCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCC-------------------------cchhc
Confidence            997644 8899999999999999999999999888777766654321111                         01122


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ...+..+.+++.+||..||++|||++++++||||++.
T Consensus       236 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          236 SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence            4578899999999999999999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.95  E-value=1.6e-27  Score=175.44  Aligned_cols=152  Identities=27%  Similarity=0.477  Sum_probs=120.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|+++||+||         |+|+|         ..+||+|||.+........ .....+++.|+|||.
T Consensus       116 ~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~  194 (287)
T 2wei_A          116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEV  194 (287)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS-CSCHHHHHTTCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc-cccccCcccccChHH
Confidence            4699999999999999999999         66632         3689999999986654322 223467899999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+ . ++.++|+||+|++++++++|..||.+....+....+........                .         ....
T Consensus       195 ~~~-~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------~---------~~~~  247 (287)
T 2wei_A          195 LRG-T-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD----------------L---------PQWR  247 (287)
T ss_dssp             HTT-C-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----------------S---------GGGT
T ss_pred             hcC-C-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----------------c---------hhhh
Confidence            865 3 78999999999999999999999998887777666654211110                0         1114


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .++..+.++|.+||..||++|||++++++||||++..+
T Consensus       248 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~  285 (287)
T 2wei_A          248 TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (287)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHCC
T ss_pred             hcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcccc
Confidence            47889999999999999999999999999999987643

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=9.2e-28  Score=181.84  Aligned_cols=149  Identities=24%  Similarity=0.346  Sum_probs=114.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||         |||      .++.+||+|||+++...... .......||+.|+|||++.
T Consensus       154 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  233 (355)
T 1vzo_A          154 ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR  233 (355)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhc
Confidence            4699999999999999999999         777      55678999999998654322 2233457899999999997


Q ss_pred             CC-CCCCCchhhhhhhHHHHHHHhCCCCCCCCC----hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          74 GS-QRYSCPVDVWSIGCIFAEIATRKPLFQGDS----EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        74 ~~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      +. ..++.++||||+||++|+|++|..||....    .......+.....                             .
T Consensus       234 ~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-----------------------------~  284 (355)
T 1vzo_A          234 GGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP-----------------------------P  284 (355)
T ss_dssp             TCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC-----------------------------C
T ss_pred             CCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCC-----------------------------C
Confidence            53 337889999999999999999999997543    2222222222100                             0


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      ....++..+.+||.+||..||++||     +++++++||||++.
T Consensus       285 ~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          285 YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            1134678899999999999999999     99999999999875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.95  E-value=3.3e-28  Score=181.87  Aligned_cols=148  Identities=22%  Similarity=0.261  Sum_probs=117.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..++.++.|+++||+||         |||       +++.+||+|||.++......  .....+|+.|+|||++.
T Consensus       144 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~--~~~~~gt~~y~aPE~~~  221 (320)
T 3a99_A          144 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR  221 (320)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC--BCCCCSCGGGSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccccc--ccCCCCCccCCChHHhc
Confidence            4699999999999999999999         666       45789999999998765432  23456899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +....+.++||||+||++|++++|..||.....      +...  ..                           .....+
T Consensus       222 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~--~~---------------------------~~~~~~  266 (320)
T 3a99_A          222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG--QV---------------------------FFRQRV  266 (320)
T ss_dssp             HSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHC--CC---------------------------CCSSCC
T ss_pred             cCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhcc--cc---------------------------cccccC
Confidence            655457889999999999999999999975321      1110  00                           001346


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhh
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA  194 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~  194 (197)
                      +..+.++|.+||+.||++|||++++++||||++.....+.+
T Consensus       267 ~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~~~~~  307 (320)
T 3a99_A          267 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETA  307 (320)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCccccc
Confidence            78999999999999999999999999999999887665543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.95  E-value=7.7e-27  Score=176.10  Aligned_cols=167  Identities=23%  Similarity=0.267  Sum_probs=120.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++..++.++.|+++||+||          |+|      .++.++|+|||.+......  ......++..|+|||++
T Consensus       145 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~  222 (348)
T 2pml_X          145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFF  222 (348)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGG
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhh
Confidence            35699999999999999999998          555      5577899999999876443  23345789999999999


Q ss_pred             cCCCCCCC-chhhhhhhHHHHHHHhCCCCCCCCCh-HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          73 LGSQRYSC-PVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        73 ~~~~~~~~-~~Diws~g~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .+...++. ++||||+||+++++++|..||..... ......+.......+....       .+...   ..........
T Consensus       223 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~  292 (348)
T 2pml_X          223 SNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRN-------HFLYP---LTNKKSTCSN  292 (348)
T ss_dssp             SSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSS-------SSTTT---TCC-------
T ss_pred             cCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchh-------hhhcc---ccccccccch
Confidence            87534555 99999999999999999999988766 5555554332111111000       00000   0001111223


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ..++..+.+|+.+||+.||++|||++++++||||++.
T Consensus       293 ~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          293 NFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             -CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             hhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence            5688999999999999999999999999999999976

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.95  E-value=4.8e-28  Score=182.14  Aligned_cols=153  Identities=22%  Similarity=0.327  Sum_probs=93.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCC---------CCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPK---------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~---------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .+++.+++.++.|+++||+||         |||+         ++.+||+|||.++......  .....+|+.|+|||++
T Consensus       124 ~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~t~~y~aPE~~  201 (336)
T 3fhr_A          124 AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVL  201 (336)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----------------------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccc--cccCCCCcCccChhhh
Confidence            599999999999999999999         6662         4558999999998654322  2345779999999998


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+.. ++.++||||+||++|++++|..||...........+........            ...         .......
T Consensus       202 ~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------------~~~---------~~~~~~~  259 (336)
T 3fhr_A          202 GPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ------------YGF---------PNPEWSE  259 (336)
T ss_dssp             --CH-HHHHHHHHHHHHHHHHHHHSSCCC---------------------------------CC---------CTTTSTT
T ss_pred             CCCC-CCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccc------------ccc---------Cchhhcc
Confidence            6644 78899999999999999999999976654332211111000000            000         0011245


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ++..+.+||.+||..||++|||++++++||||++.
T Consensus       260 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          260 VSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence            78899999999999999999999999999999764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.95  E-value=1e-27  Score=176.12  Aligned_cols=144  Identities=19%  Similarity=0.173  Sum_probs=109.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCCC-------------------------cEEEeecCCccccCCCcc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKSN-------------------------IVKVADFGLARAFGVPVR   55 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~-------------------------~vkl~Dfg~s~~~~~~~~   55 (197)
                      ..+++..++.++.|+++||+||         |||+|.                         .++|+|||.+....... 
T Consensus       110 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-  188 (289)
T 1x8b_A          110 SYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ-  188 (289)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC-
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc-
Confidence            4589999999999999999999         776432                         57999999998765432 


Q ss_pred             ccccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy6390          56 IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK  135 (197)
Q Consensus        56 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (197)
                         ...+|+.|+|||.+.+...++.++||||+||+++++++|..++.....   ...+.....                 
T Consensus       189 ---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~~~~~-----------------  245 (289)
T 1x8b_A          189 ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQGRL-----------------  245 (289)
T ss_dssp             ---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHHHHTTCC-----------------
T ss_pred             ---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---HHHHHcCCC-----------------
Confidence               235899999999998755567899999999999999999877654432   222221100                 


Q ss_pred             CCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         136 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                                 ......++..+.+++.+||+.||++|||++++++||||++..
T Consensus       246 -----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          246 -----------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             -----------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             -----------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence                       011134778999999999999999999999999999998753

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.95  E-value=3.4e-27  Score=174.57  Aligned_cols=158  Identities=25%  Similarity=0.268  Sum_probs=110.2

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--------------ccccc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--------------RIYTH   59 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--------------~~~~~   59 (197)
                      ...+++..++.++.|+++||+||         |+|      +++.++|+|||.+.......              .....
T Consensus       110 ~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (303)
T 1zy4_A          110 NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS  189 (303)
T ss_dssp             CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC---------------------
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhcccccccccccccccc
Confidence            34588899999999999999999         666      55778999999997654321              12234


Q ss_pred             ceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh-HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy6390          60 EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF  138 (197)
Q Consensus        60 ~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (197)
                      ..+++.|+|||.+.+...++.++|+||+||++|++++   ||..... ......+.......+.                
T Consensus       190 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~----------------  250 (303)
T 1zy4_A          190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPP----------------  250 (303)
T ss_dssp             ----CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCT----------------
T ss_pred             CCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCc----------------
Confidence            5689999999999865558899999999999999997   4543222 2223333221111100                


Q ss_pred             cccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhh
Q psy6390         139 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFA  194 (197)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~  194 (197)
                               ......+..+.+++.+||+.||++|||++++++||||+.....+.+.
T Consensus       251 ---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~~  297 (303)
T 1zy4_A          251 ---------DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIK  297 (303)
T ss_dssp             ---------TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCCHHHHHH
T ss_pred             ---------cccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCChHHHHH
Confidence                     01134567889999999999999999999999999998765544433

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.94  E-value=6.3e-27  Score=172.74  Aligned_cols=154  Identities=22%  Similarity=0.347  Sum_probs=112.5

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++..+..++.|++.||+||         |+|       .++.++|+|||.+..............+++.|+|||++.+
T Consensus       118 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  197 (295)
T 2clq_A          118 KDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK  197 (295)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcC
Confidence            467889999999999999999         666       3678999999999876543333344578999999999965


Q ss_pred             C-CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHH-HHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 S-QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ-LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~-~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      . ..++.++|+||+|+++|++++|..||........ ....... ...+                          .....
T Consensus       198 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~--------------------------~~~~~  250 (295)
T 2clq_A          198 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF-KVHP--------------------------EIPES  250 (295)
T ss_dssp             GGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH-CCCC--------------------------CCCTT
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc-cccc--------------------------ccccc
Confidence            3 2378899999999999999999999976543322 2221111 1000                          11134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ++..+.+++.+||+.||++|||++++++||||+......
T Consensus       251 ~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~  289 (295)
T 2clq_A          251 MSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKK  289 (295)
T ss_dssp             SCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC-----
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhccccC
Confidence            678999999999999999999999999999998765443

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=3.5e-27  Score=176.37  Aligned_cols=153  Identities=27%  Similarity=0.419  Sum_probs=115.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..++.++.|+++||+||         |||+|         ..+||+|||.++....... .....+|+.|+|||+
T Consensus       109 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~gt~~y~aPE~  187 (322)
T 2ycf_A          109 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEV  187 (322)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHH-HHHHHSCCTTCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccc-cccccCCcCccCchh
Confidence            4699999999999999999999         66632         3489999999987654322 234468999999999


Q ss_pred             hc--CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHH-HHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          72 LL--GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL-FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        72 ~~--~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      +.  ....++.++||||+||++|++++|..||........+ ..+.......                         ...
T Consensus       188 ~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------------~~~  242 (322)
T 2ycf_A          188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF-------------------------IPE  242 (322)
T ss_dssp             HHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCC-------------------------CHH
T ss_pred             hccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcccc-------------------------Cch
Confidence            84  2344789999999999999999999999765432222 2222110000                         011


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ....++..+.+++.+||..||++|||++++++||||++..
T Consensus       243 ~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHH
T ss_pred             hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHH
Confidence            2245788999999999999999999999999999998643

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.94  E-value=1.1e-26  Score=173.05  Aligned_cols=152  Identities=18%  Similarity=0.241  Sum_probs=109.2

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++..+..++.|+++||+||          |+|      .++.++|+|||.+........ .....+++.|+|||.+
T Consensus       118 ~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~  196 (318)
T 2dyl_A          118 QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA-KDRSAGCAAYMAPERI  196 (318)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC---------------CCTTCCHHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc-ccccCCCccccChhhc
Confidence            35699999999999999999999          666      557789999999976544322 2344689999999999


Q ss_pred             cC----CCCCCCchhhhhhhHHHHHHHhCCCCCCCC-ChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          73 LG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGD-SEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        73 ~~----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      ..    ...++.++||||+||++|++++|..||... ........+........                          
T Consensus       197 ~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------  250 (318)
T 2dyl_A          197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL--------------------------  250 (318)
T ss_dssp             C--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC--------------------------
T ss_pred             ccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC--------------------------
Confidence            52    234788999999999999999999999874 34444444443211100                          


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      .....++..+.+++.+||+.||.+||+++++++||||++.
T Consensus       251 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          251 PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence            0013467899999999999999999999999999999753

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.94  E-value=1.3e-27  Score=177.07  Aligned_cols=152  Identities=20%  Similarity=0.175  Sum_probs=101.6

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc-----------------ccC------CCCcEEEeecCCccccCCCccc----cccce
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC-----------------IKP------KSNIVKVADFGLARAFGVPVRI----YTHEV   61 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l-----------------lkp------~~~~vkl~Dfg~s~~~~~~~~~----~~~~~   61 (197)
                      ..++++..+.+++.|+++||+||                 |||      +++.+||+|||+|+........    ....+
T Consensus        94 ~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~  173 (303)
T 3hmm_A           94 RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV  173 (303)
T ss_dssp             HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----
T ss_pred             hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeeccccc
Confidence            45799999999999999999998                 566      5678999999999876443221    22457


Q ss_pred             eccceeCchhhcCCC-----CCCCchhhhhhhHHHHHHHhCCCCCCCCCh--------------HHHHHHHHhhcCCCCC
Q psy6390          62 VTLWYRAPEVLLGSQ-----RYSCPVDVWSIGCIFAEIATRKPLFQGDSE--------------IDQLFRIFRVLTTPTE  122 (197)
Q Consensus        62 ~~~~y~aPE~~~~~~-----~~~~~~Diws~g~~l~~ll~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~  122 (197)
                      ||+.|||||++.+..     .++.++||||+||++|||++|..|+.....              ..........  .   
T Consensus       174 GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~---  248 (303)
T 3hmm_A          174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE--Q---  248 (303)
T ss_dssp             CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT--S---
T ss_pred             ccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhc--c---
Confidence            999999999997532     256789999999999999999776643211              1111111100  0   


Q ss_pred             CCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         123 DNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                                .....++...      .....+..+.+|+.+||+.||++|||+.|+++.
T Consensus       249 ----------~~rp~~p~~~------~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          249 ----------KLRPNIPNRW------QSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             ----------CCCCCCCGGG------GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             ----------cCCCCCCccc------cchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                      0000000000      001123467899999999999999999999853

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.94  E-value=4.4e-27  Score=172.32  Aligned_cols=150  Identities=22%  Similarity=0.286  Sum_probs=119.3

Q ss_pred             cCCHHHHHHHHHHHHhhhccc--------------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCch
Q psy6390          11 QVGTYQVKITTRLFLQATSFC--------------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l--------------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      .+++..+..++.|+++||+||              |+|      +++.++|+|||.+..............++..|+|||
T Consensus       107 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE  186 (279)
T 2w5a_A          107 YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE  186 (279)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChH
Confidence            399999999999999999987              555      457789999999987654433333457899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .+.+.. ++.++|+||+|+++|++++|..||...........+.......                            ..
T Consensus       187 ~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~----------------------------~~  237 (279)
T 2w5a_A          187 QMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR----------------------------IP  237 (279)
T ss_dssp             HHHCC--CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC----------------------------CC
T ss_pred             HhccCC-CCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccccc----------------------------CC
Confidence            998754 8899999999999999999999999887766666654421110                            11


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ...+..+.+++.+||..||++|||++++++|+|+.+-+.
T Consensus       238 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  276 (279)
T 2w5a_A          238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH  276 (279)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred             cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence            346789999999999999999999999999999986543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.94  E-value=2.4e-27  Score=179.81  Aligned_cols=175  Identities=18%  Similarity=0.287  Sum_probs=114.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.||+||          |||      .++.++|+|||.+......  ......+|+.|+|||++.
T Consensus       126 ~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~  203 (360)
T 3eqc_A          126 GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQ  203 (360)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--C----CCCCTTCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--cccCCCCCCCeECHHHHc
Confidence            4699999999999999999999          666      5577899999998654221  123347899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCC----CCCCC------CCCcccch
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSK----LPDYK------TTFPEWSN  143 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~~~  143 (197)
                      +.. ++.++||||+||++++|++|..||...........+.................    ...+.      ........
T Consensus       204 ~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (360)
T 3eqc_A          204 GTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLD  282 (360)
T ss_dssp             TCC-CSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHH
T ss_pred             CCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhh
Confidence            754 88999999999999999999999988776554332211111100000000000    00000      00000000


Q ss_pred             hhhhhc-----cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         144 FCLDKH-----VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       144 ~~~~~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ......     ...++..+.+||.+||..||++|||++++++||||++.
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          283 YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             HHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             HHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence            000000     12367899999999999999999999999999999753

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.94  E-value=1.2e-26  Score=172.72  Aligned_cols=153  Identities=25%  Similarity=0.354  Sum_probs=110.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC-----CCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK-----SNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~-----~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||.||         |+|+     ++.+||+|||.+........  ......+++.|+|||.+.
T Consensus       122 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  201 (313)
T 3cek_A          122 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK  201 (313)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC--------------CCGGGCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHh
Confidence            4689999999999999999999         7774     46689999999987644321  123456899999999986


Q ss_pred             CC----------CCCCCchhhhhhhHHHHHHHhCCCCCCCCChH-HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy6390          74 GS----------QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI-DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS  142 (197)
Q Consensus        74 ~~----------~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (197)
                      +.          ..++.++||||+|+++|++++|..||...... .....+.......                      
T Consensus       202 ~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------  259 (313)
T 3cek_A          202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI----------------------  259 (313)
T ss_dssp             TCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC----------------------
T ss_pred             hcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccccc----------------------
Confidence            41          24788999999999999999999999775433 3333332110000                      


Q ss_pred             hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       143 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                           ......+..+.+++.+||..||++|||++++++||||+....
T Consensus       260 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~  301 (313)
T 3cek_A          260 -----EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH  301 (313)
T ss_dssp             -----CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred             -----CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCC
Confidence                 001234678999999999999999999999999999986543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.94  E-value=1e-27  Score=179.54  Aligned_cols=146  Identities=23%  Similarity=0.266  Sum_probs=106.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc------------cccccceec
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV------------RIYTHEVVT   63 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~------------~~~~~~~~~   63 (197)
                      ..++..+..++.|+++||+||         |||      .++.+||+|||.++......            .......||
T Consensus       160 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt  239 (332)
T 3qd2_B          160 DREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT  239 (332)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence            356667899999999999999         777      45778999999998765432            122345789


Q ss_pred             cceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccch
Q psy6390          64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN  143 (197)
Q Consensus        64 ~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (197)
                      +.|+|||++.+.. ++.++||||+||++|++++|..++.     .....+........                      
T Consensus       240 ~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~~~~~~~~~----------------------  291 (332)
T 3qd2_B          240 KLYMSPEQIHGNN-YSHKVDIFSLGLILFELLYSFSTQM-----ERVRIITDVRNLKF----------------------  291 (332)
T ss_dssp             GGGSCHHHHHCCC-CCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHHHHHHTTCC----------------------
T ss_pred             cCccChHHhcCCC-CcchhhHHHHHHHHHHHHHcCCChh-----HHHHHHHHhhccCC----------------------
Confidence            9999999998754 8999999999999999999865532     11111111100000                      


Q ss_pred             hhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       144 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                         .......+..+.+++.+||+.||++|||++|+++||||+++
T Consensus       292 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~~  332 (332)
T 3qd2_B          292 ---PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL  332 (332)
T ss_dssp             ---CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCCC
T ss_pred             ---CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhcC
Confidence               00112245678999999999999999999999999999864

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.94  E-value=2.9e-28  Score=187.98  Aligned_cols=141  Identities=16%  Similarity=0.121  Sum_probs=111.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc-
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL-   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~-   73 (197)
                      ..+++..+..++.|+++||+||         |||      .++.+||+|||+++.....   ....+| +.|+|||++. 
T Consensus       206 ~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~  281 (413)
T 3dzo_A          206 KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAE  281 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhc
Confidence            4578889999999999999999         777      4567899999998865433   334466 9999999993 


Q ss_pred             --------CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhh
Q psy6390          74 --------GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC  145 (197)
Q Consensus        74 --------~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (197)
                              ....++.++||||+||++|+|++|+.||...........+                                
T Consensus       282 ~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~--------------------------------  329 (413)
T 3dzo_A          282 RMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI--------------------------------  329 (413)
T ss_dssp             HTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGG--------------------------------
T ss_pred             cccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHH--------------------------------
Confidence                    2233778999999999999999999999765422111000                                


Q ss_pred             hhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       146 ~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                       ......++..+.+||.+||+.||++||++.++++||||++.
T Consensus       330 -~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          330 -FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             -GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             -HhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence             01113577899999999999999999999999999999764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.94  E-value=2.4e-27  Score=183.74  Aligned_cols=151  Identities=21%  Similarity=0.256  Sum_probs=105.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCCCc-----------EEEeecCCccccCCCc---cccccceecccee
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKSNI-----------VKVADFGLARAFGVPV---RIYTHEVVTLWYR   67 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~-----------vkl~Dfg~s~~~~~~~---~~~~~~~~~~~y~   67 (197)
                      .+++..+..++.||++||+||         |||+|..           ++|+|||+++......   .......||+.|+
T Consensus       114 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~  193 (432)
T 3p23_A          114 AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI  193 (432)
T ss_dssp             CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSC
T ss_pred             CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCcc
Confidence            356667889999999999999         8886543           5699999998765332   1233457899999


Q ss_pred             CchhhcC--CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchh
Q psy6390          68 APEVLLG--SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF  144 (197)
Q Consensus        68 aPE~~~~--~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (197)
                      |||++.+  ...++.++||||+||+++++++ |..||......... .+..   .......         .         
T Consensus       194 APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-~~~~---~~~~~~~---------~---------  251 (432)
T 3p23_A          194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-ILLG---ACSLDCL---------H---------  251 (432)
T ss_dssp             CGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-HHTT---CCCCTTS---------C---------
T ss_pred             ChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-HHhc---cCCcccc---------C---------
Confidence            9999974  2346789999999999999999 89999655443322 1111   1000000         0         


Q ss_pred             hhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       145 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                          .....+..+.+||.+||+.||++|||++++++||||.+.
T Consensus       252 ----~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          252 ----PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             ----TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             ----ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence                001123567899999999999999999999999999754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.94  E-value=1.1e-26  Score=172.91  Aligned_cols=151  Identities=26%  Similarity=0.359  Sum_probs=114.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE~   71 (197)
                      ..+++.++..++.|+++||+||         |||      .++.+||+|||.++.......   ......||+.|+|||+
T Consensus       111 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  190 (311)
T 3ork_A          111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ  190 (311)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHH
Confidence            4699999999999999999999         777      456789999999986643221   1223468999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++||||+||++|+|++|..||.+................+                         ......
T Consensus       191 ~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~  244 (311)
T 3ork_A          191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-------------------------PSARHE  244 (311)
T ss_dssp             HHTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC-------------------------HHHHST
T ss_pred             hcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC-------------------------cccccC
Confidence            98754 8899999999999999999999999888777666554421111                         112224


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      .++..+.+++.+||+.||++||++.+++.|+|++.
T Consensus       245 ~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          245 GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            57889999999999999999999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.94  E-value=3.1e-26  Score=171.21  Aligned_cols=148  Identities=19%  Similarity=0.163  Sum_probs=107.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|+++||+||         |||      +++.+||+|||.++.......  ......+++.|+|||.+.
T Consensus       133 ~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  212 (323)
T 3qup_A          133 NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA  212 (323)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhc
Confidence            599999999999999999999         777      456789999999986643321  122335577899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++|++++ |..||.+.........+.......                            ....
T Consensus       213 ~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~  263 (323)
T 3qup_A          213 DNL-YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLK----------------------------QPPE  263 (323)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC----------------------------CCTT
T ss_pred             CCC-CCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCC----------------------------CCCc
Confidence            754 8899999999999999999 999999888777666654321111                            1134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCC-------HHHHhcCcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRIN-------AENALKHKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s-------~~ell~hp~~~~~  187 (197)
                      .+..+.+++.+||+.||++|||       ++++++|||+...
T Consensus       264 ~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          264 CMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence            6789999999999999999999       7778999999764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.93  E-value=4.2e-26  Score=169.66  Aligned_cols=151  Identities=20%  Similarity=0.168  Sum_probs=108.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc-----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC-----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l-----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|+++||+||           |||      +++.+||+|||+++.............||+.|+|||++.
T Consensus       133 ~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~  212 (309)
T 3p86_A          133 QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLR  212 (309)
T ss_dssp             HSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhc
Confidence            499999999999999999998           666      456789999999986554433344567899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|++++|..||...........+.......                           .....+
T Consensus       213 ~~~-~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~  264 (309)
T 3p86_A          213 DEP-SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL---------------------------EIPRNL  264 (309)
T ss_dssp             TCC-CCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCC---------------------------CCCTTS
T ss_pred             CCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC---------------------------CCCccC
Confidence            755 7899999999999999999999999888777666553321111                           111346


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc--CcccCCCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK--HKYFADKTD  189 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~--hp~~~~~~~  189 (197)
                      +..+.++|.+||..||++|||++++++  ++++++...
T Consensus       265 ~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p  302 (309)
T 3p86_A          265 NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP  302 (309)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999987  567665443

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.93  E-value=1.2e-26  Score=180.01  Aligned_cols=150  Identities=23%  Similarity=0.342  Sum_probs=103.8

Q ss_pred             CHHHHHHHHHHHHhhhccc---------ccCCC-------------------CcEEEeecCCccccCCCcc----ccccc
Q psy6390          13 GTYQVKITTRLFLQATSFC---------IKPKS-------------------NIVKVADFGLARAFGVPVR----IYTHE   60 (197)
Q Consensus        13 ~~~~~~~~~~qi~~~l~~l---------lkp~~-------------------~~vkl~Dfg~s~~~~~~~~----~~~~~   60 (197)
                      ++..+..++.||++||+||         |||+|                   ..+||+|||+++.......    .....
T Consensus       113 ~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~  192 (434)
T 2rio_A          113 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP  192 (434)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC------------
T ss_pred             cchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCC
Confidence            3445678999999999999         77743                   3679999999987654322    12245


Q ss_pred             eeccceeCchhhcC------CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCC
Q psy6390          61 VVTLWYRAPEVLLG------SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPD  133 (197)
Q Consensus        61 ~~~~~y~aPE~~~~------~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (197)
                      .||+.|+|||++.+      ...++.++||||+||++|++++ |..||.......  ..+........     ...   .
T Consensus       193 ~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~-----~~~---~  262 (434)
T 2rio_A          193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLD-----EMK---C  262 (434)
T ss_dssp             --CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCC-----CCT---T
T ss_pred             CCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcc-----ccc---c
Confidence            78999999999965      2347899999999999999999 999997654433  22222111100     000   0


Q ss_pred             CCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                             .       ....++.++.++|.+||+.||++|||++++++||||..
T Consensus       263 -------~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          263 -------L-------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             -------C-------CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             -------c-------ccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence                   0       00124568899999999999999999999999999964

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.93  E-value=2.4e-26  Score=172.13  Aligned_cols=155  Identities=21%  Similarity=0.273  Sum_probs=96.0

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++..+..++.|++.||.||          |||      .++.+||+|||.++....... .....+|+.|+|||++
T Consensus       119 ~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~~~gt~~y~aPE~~  197 (327)
T 3aln_A          119 DDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA-KTRDAGCRPYMAPERI  197 (327)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----------------------
T ss_pred             cccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc-cccCCCCccccCceee
Confidence            35689999999999999999998          666      567789999999986644322 2234789999999998


Q ss_pred             c---CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          73 L---GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        73 ~---~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .   ....++.++||||+||++|+|++|..||........  .+......    ..      +..           ....
T Consensus       198 ~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~----~~------~~~-----------~~~~  254 (327)
T 3aln_A          198 DPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD--QLTQVVKG----DP------PQL-----------SNSE  254 (327)
T ss_dssp             --------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCCS----CC------CCC-----------CCCS
T ss_pred             ccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH--HHHHHhcC----CC------CCC-----------CCcc
Confidence            4   223478999999999999999999999976532111  11000000    00      000           0011


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ...++..+.+++.+||+.||++|||++++++||||.+.
T Consensus       255 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          255 EREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             cccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence            14478899999999999999999999999999999743

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.93  E-value=6.9e-26  Score=168.55  Aligned_cols=143  Identities=22%  Similarity=0.324  Sum_probs=111.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||         |+|       +++.++|+|||.+.......  .....++..|+|||++.
T Consensus       134 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~  211 (312)
T 2iwi_A          134 GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP--YTDFDGTRVYSPPEWIS  211 (312)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC--BCCCCSCTTTSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc--ccccCCcccccCceeee
Confidence            4599999999999999999999         555       56778999999998765432  23456899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +....+.++||||+||++|++++|..||.....      +.....                             .....+
T Consensus       212 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~-----------------------------~~~~~~  256 (312)
T 2iwi_A          212 RHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAEL-----------------------------HFPAHV  256 (312)
T ss_dssp             HSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHTCC-----------------------------CCCTTS
T ss_pred             cCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hhhhcc-----------------------------CCcccC
Confidence            655345689999999999999999999975321      111000                             011346


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      +..+.++|.+||+.||++|||++++++||||++..+
T Consensus       257 ~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          257 SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence            788999999999999999999999999999987644

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.93  E-value=4e-27  Score=175.83  Aligned_cols=165  Identities=21%  Similarity=0.244  Sum_probs=112.5

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccCCCC----------cEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKPKSN----------IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp~~~----------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      +++..++.++.|+++||+||         |||+|.          .+||+|||.++....... .....+|+.|+|||++
T Consensus       109 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~  187 (319)
T 4euu_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ-FVSLYGTEEYLHPDMY  187 (319)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC-BCCCCSCGGGCCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc-eeecccCCCccCHHHh
Confidence            99999999999999999999         777554          379999999987654432 2345789999999998


Q ss_pred             cC-------CCCCCCchhhhhhhHHHHHHHhCCCCCCCCC----hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCccc
Q psy6390          73 LG-------SQRYSCPVDVWSIGCIFAEIATRKPLFQGDS----EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW  141 (197)
Q Consensus        73 ~~-------~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (197)
                      ..       ...++.++||||+||++|++++|..||....    .......+...   .+...+........   ....|
T Consensus       188 ~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~---~~~~~  261 (319)
T 4euu_A          188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG---KPSGAISGVQKAEN---GPIDW  261 (319)
T ss_dssp             HHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH---CCTTCCEEEECSTT---CCEEE
T ss_pred             hhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC---CCcccchhhhcccC---Ccccc
Confidence            62       2447899999999999999999999997533    23334444332   22211111111100   00001


Q ss_pred             chhh--hhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcc
Q psy6390         142 SNFC--LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY  183 (197)
Q Consensus       142 ~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~  183 (197)
                      ....  ........+..+.+++.+||+.||++|||++|+++||-
T Consensus       262 ~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          262 SGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             ESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             CccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            0000  00111224567889999999999999999999999973

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.93  E-value=1.9e-25  Score=162.78  Aligned_cols=148  Identities=16%  Similarity=0.167  Sum_probs=116.4

Q ss_pred             HHHhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeC
Q psy6390           5 IQLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRA   68 (197)
Q Consensus         5 ~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~a   68 (197)
                      ++.....+++..+..++.|+++||+||         |||      .++.++|+|||.+........ ......+|+.|+|
T Consensus        94 l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~a  173 (268)
T 3sxs_A           94 LRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSA  173 (268)
T ss_dssp             HHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCC
T ss_pred             HHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCC
Confidence            333445699999999999999999999         777      557789999999986654322 2233455778999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      ||.+.+.. ++.++|+||+|++++++++ |..||...........+........                          
T Consensus       174 PE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------  226 (268)
T 3sxs_A          174 PEVFHYFK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR--------------------------  226 (268)
T ss_dssp             HHHHHHSE-EETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC--------------------------
T ss_pred             HHHHhccC-CchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCC--------------------------
Confidence            99997644 7899999999999999998 9999998888777766544221111                          


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                        ....+..+.+++.+||+.||++|||+++++++
T Consensus       227 --~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          227 --PHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             --CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             --CCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence              12356789999999999999999999999975

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.93  E-value=1.3e-25  Score=170.82  Aligned_cols=143  Identities=21%  Similarity=0.273  Sum_probs=112.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++.++..++.||+.||+||         |||      .++.+||+|||+++.......  ......+|+.|+|||++
T Consensus       198 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~  277 (370)
T 2psq_A          198 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL  277 (370)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHh
Confidence            3589999999999999999999         777      557789999999986644221  12234567899999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|+|++ |..||.+....+....+......                            ....
T Consensus       278 ~~~~-~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  328 (370)
T 2psq_A          278 FDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM----------------------------DKPA  328 (370)
T ss_dssp             HTCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC----------------------------CCCT
T ss_pred             cCCC-CCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCCC
Confidence            8754 8999999999999999999 99999887766665554432111                            0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++..+.+++.+||+.||++||+++|++++
T Consensus       329 ~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          329 NCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            467899999999999999999999999864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=1.3e-25  Score=163.69  Aligned_cols=144  Identities=17%  Similarity=0.205  Sum_probs=114.8

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCcc-ccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++..+..++.|+++||+||         |||+      ++.++|+|||.+........ ......++..|+|||.+
T Consensus       100 ~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (269)
T 4hcu_A          100 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF  179 (269)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHH
T ss_pred             CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHh
Confidence            34599999999999999999999         7774      45689999999986644321 22234567789999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+|++++++++ |..||...........+........                            ..
T Consensus       180 ~~~~-~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------------~~  230 (269)
T 4hcu_A          180 SFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK----------------------------PR  230 (269)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC----------------------------CT
T ss_pred             cCCC-CCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCC----------------------------CC
Confidence            7645 8899999999999999999 9999999888877776654211110                            13


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+..+.+++.+||+.||++|||++++++|
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            357889999999999999999999999875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.93  E-value=1.9e-25  Score=165.00  Aligned_cols=147  Identities=17%  Similarity=0.171  Sum_probs=110.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCCC------C-----cEEEeecCCccccCCCcc-------ccccce
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPKS------N-----IVKVADFGLARAFGVPVR-------IYTHEV   61 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~-----~vkl~Dfg~s~~~~~~~~-------~~~~~~   61 (197)
                      ..++++..+..++.|+++||+||         |||+|      +     .++|+|||.++.......       ......
T Consensus       100 ~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~  179 (298)
T 1csn_A          100 GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLS  179 (298)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCC
Confidence            34699999999999999999999         66633      2     289999999986644321       123456


Q ss_pred             eccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC---hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy6390          62 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS---EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF  138 (197)
Q Consensus        62 ~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (197)
                      ||+.|+|||++.+.. ++.++||||+||++|++++|..||.+..   .......+.......                  
T Consensus       180 gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------------  240 (298)
T 1csn_A          180 GTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST------------------  240 (298)
T ss_dssp             SCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS------------------
T ss_pred             CCcccCCchhhcCCC-CChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc------------------
Confidence            899999999997744 8999999999999999999999998743   333333332211110                  


Q ss_pred             cccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         139 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                            ........++..+.+++.+||+.||++||+++++++
T Consensus       241 ------~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          241 ------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             ------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ------cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence                  011222457889999999999999999999999875

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.93  E-value=3.3e-25  Score=169.36  Aligned_cols=142  Identities=20%  Similarity=0.277  Sum_probs=114.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..++.++.|+++||+||         |||      +++.+||+|||+++......  .......+|+.|+|||++.
T Consensus       187 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  266 (382)
T 3tt0_A          187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF  266 (382)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhc
Confidence            499999999999999999999         777      55778999999998664422  1223345688999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||+++++++ |..||.+....+....+.......                            ....
T Consensus       267 ~~~-~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~  317 (382)
T 3tt0_A          267 DRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD----------------------------KPSN  317 (382)
T ss_dssp             SCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC----------------------------CCSS
T ss_pred             CCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CCcc
Confidence            744 8999999999999999999 999999888777666654421111                            1134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ++..+.+++.+||+.||++|||+++++++
T Consensus       318 ~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          318 CTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            67899999999999999999999999875

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.92  E-value=2.7e-25  Score=166.42  Aligned_cols=144  Identities=18%  Similarity=0.185  Sum_probs=113.1

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCc
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAP   69 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aP   69 (197)
                      ....+++..+..++.|+++||+||         |||      +++.++|+|||+++.......   ......+|..|+||
T Consensus       144 ~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aP  223 (325)
T 3kul_A          144 HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP  223 (325)
T ss_dssp             TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCH
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCH
Confidence            335799999999999999999999         777      557789999999987654322   12233457789999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      |++.+.. ++.++||||+||++|++++ |..||......+....+......+.                           
T Consensus       224 E~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------  275 (325)
T 3kul_A          224 EAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA---------------------------  275 (325)
T ss_dssp             HHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC---------------------------
T ss_pred             hHhcCCC-CCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCC---------------------------
Confidence            9997644 8899999999999999999 9999999888877777654322111                           


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                       ...++..+.+++.+||..||++|||++++++
T Consensus       276 -~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          276 -PMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence             1346789999999999999999999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.92  E-value=1.1e-25  Score=168.71  Aligned_cols=144  Identities=18%  Similarity=0.213  Sum_probs=111.6

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~   71 (197)
                      ...+++..+..++.|+++||+||         |||      +++.+||+|||+++.......  ......+|..|+|||.
T Consensus       111 ~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~  190 (327)
T 3poz_A          111 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES  190 (327)
T ss_dssp             TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHH
Confidence            35699999999999999999999         777      446789999999987644322  1223455789999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++||||+||++|++++ |..||.+.........+......+                            ..
T Consensus       191 ~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~  241 (327)
T 3poz_A          191 ILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP----------------------------QP  241 (327)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC----------------------------CC
T ss_pred             hccCC-CCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCC----------------------------CC
Confidence            98744 8999999999999999999 999998877665555443321111                            01


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ...+..+.+++.+||+.||++|||+.+++++
T Consensus       242 ~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          242 PICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            3366789999999999999999999998865

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.92  E-value=2e-25  Score=163.83  Aligned_cols=144  Identities=21%  Similarity=0.221  Sum_probs=103.6

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++..+..++.|+++||+||         |||      .++.+||+|||.++....... ......+++.|+|||++
T Consensus       110 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~  189 (281)
T 1mp8_A          110 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI  189 (281)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhc
Confidence            34699999999999999999999         777      456789999999987644322 12233557889999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .... ++.++|+||+||++|++++ |..||.+....+....+......                            ....
T Consensus       190 ~~~~-~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~----------------------------~~~~  240 (281)
T 1mp8_A          190 NFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL----------------------------PMPP  240 (281)
T ss_dssp             HHCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC----------------------------CCCT
T ss_pred             ccCC-CCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC----------------------------CCCC
Confidence            7644 8899999999999999996 99999988777666665432111                            0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++..+.+++.+||..||++|||+++++++
T Consensus       241 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          241 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            477899999999999999999999998853

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.92  E-value=3.2e-25  Score=162.80  Aligned_cols=144  Identities=19%  Similarity=0.202  Sum_probs=115.4

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~   72 (197)
                      ..++++..+..++.|+++||.||         |||      +++.++|+|||.+........ ......+|+.|+|||.+
T Consensus       114 ~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~  193 (283)
T 3gen_A          114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL  193 (283)
T ss_dssp             GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHh
Confidence            45699999999999999999999         777      556789999999986644321 12233457889999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+|+++|++++ |..||...........+........                            ..
T Consensus       194 ~~~~-~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------------~~  244 (283)
T 3gen_A          194 MYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------------------------PH  244 (283)
T ss_dssp             HHCC-CSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC----------------------------CT
T ss_pred             ccCC-CCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC----------------------------CC
Confidence            8654 8899999999999999998 9999999888777776654322111                            13


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+..+.+++.+||+.||++|||++++++|
T Consensus       245 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          245 LASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            356889999999999999999999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.92  E-value=1.5e-25  Score=167.71  Aligned_cols=143  Identities=16%  Similarity=0.148  Sum_probs=110.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|+++||+||         |||      +++.+||+|||+++.......  ......++..|+|||.+
T Consensus       110 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  189 (325)
T 3kex_A          110 GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI  189 (325)
T ss_dssp             GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHh
Confidence            4699999999999999999999         777      446789999999987654322  22344667899999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|++++ |..||.+.........+........                            ..
T Consensus       190 ~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------------~~  240 (325)
T 3kex_A          190 HFGK-YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ----------------------------PQ  240 (325)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCC----------------------------CT
T ss_pred             ccCC-CChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC----------------------------CC
Confidence            7645 8999999999999999999 9999988776655555543211110                            02


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+..+.+++.+||..||++|||++++++|
T Consensus       241 ~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          241 ICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             cCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            245677899999999999999999999875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.92  E-value=1.9e-25  Score=164.81  Aligned_cols=148  Identities=17%  Similarity=0.137  Sum_probs=110.0

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC---------CCCcEEEeecCCccccCCCcc-------cccccee
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP---------KSNIVKVADFGLARAFGVPVR-------IYTHEVV   62 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp---------~~~~vkl~Dfg~s~~~~~~~~-------~~~~~~~   62 (197)
                      ...++++..+..++.|+++||+||         |||         +++.+||+|||.+........       ......+
T Consensus        98 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~g  177 (296)
T 3uzp_A           98 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTG  177 (296)
T ss_dssp             TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCS
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccccccccccccc
Confidence            345799999999999999999999         555         456689999999987644322       1234578


Q ss_pred             ccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh---HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCc
Q psy6390          63 TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP  139 (197)
Q Consensus        63 ~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (197)
                      |+.|+|||.+.+.. ++.++||||+||++|++++|..||.....   ......+.......                   
T Consensus       178 t~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------  237 (296)
T 3uzp_A          178 TARYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-------------------  237 (296)
T ss_dssp             CTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-------------------
T ss_pred             ccccCChhhhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-------------------
Confidence            99999999998755 88999999999999999999999976432   11222221100000                   


Q ss_pred             ccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                           ........++..+.+++.+||+.||++|||++++++
T Consensus       238 -----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          238 -----PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -----CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -----chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                 011122457889999999999999999999999875

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.92  E-value=4.5e-25  Score=163.00  Aligned_cols=151  Identities=20%  Similarity=0.269  Sum_probs=111.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      .++++..+..++.|+++||+||         |||      .++.+||+|||.++....... ......||+.|+|||.+.
T Consensus       106 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  185 (294)
T 4eqm_A          106 GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK  185 (294)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhc
Confidence            4699999999999999999999         777      556789999999987654322 223456899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++|+||+|+++|++++|..||.+.................                        ........+
T Consensus       186 ~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~  240 (294)
T 4eqm_A          186 GEA-TDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN------------------------VTTDVRKDI  240 (294)
T ss_dssp             TCC-CCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC------------------------HHHHSCTTS
T ss_pred             CCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC------------------------cchhcccCC
Confidence            755 7899999999999999999999999888766654443211000                        011223557


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      +..+.+++.+||..||++||+..+.+.+.|..
T Consensus       241 ~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          241 PQSLSNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             CHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            88999999999999999999666666666643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.92  E-value=3.5e-25  Score=165.96  Aligned_cols=143  Identities=18%  Similarity=0.225  Sum_probs=106.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCcc--ccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~   71 (197)
                      ...+++..+..++.|+++||+||         |||+      ++.+||+|||+++.......  ......+|..|+|||.
T Consensus       111 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~  190 (327)
T 3lzb_A          111 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES  190 (327)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHH
Confidence            35699999999999999999999         7884      46789999999987643322  2223455778999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++||||+||++|++++ |..||.+.........+......+                            ..
T Consensus       191 ~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~  241 (327)
T 3lzb_A          191 ILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP----------------------------QP  241 (327)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC----------------------------CC
T ss_pred             HcCCC-CChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CC
Confidence            98744 8999999999999999999 999999887766655554321111                            01


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...+..+.+++.+||..||++|||++|+++
T Consensus       242 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          242 PICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             TTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            336778999999999999999999999886

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.92  E-value=3.7e-25  Score=162.34  Aligned_cols=145  Identities=17%  Similarity=0.158  Sum_probs=110.3

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEV   71 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~   71 (197)
                      ....+++..+..++.|+++||+||         |||      +++.++|+|||.+........ ......++..|+|||.
T Consensus       106 ~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~  185 (281)
T 3cc6_A          106 NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES  185 (281)
T ss_dssp             HTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHH
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchh
Confidence            334599999999999999999999         777      446789999999986644321 1223456788999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++|+||+|+++|++++ |..||......+....+......+                            ..
T Consensus       186 ~~~~~-~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~  236 (281)
T 3cc6_A          186 INFRR-FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP----------------------------KP  236 (281)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC----------------------------CC
T ss_pred             hccCC-CCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC----------------------------CC
Confidence            97644 8899999999999999998 999998776666555544321111                            01


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..++..+.+++.+||..||++|||+++++++
T Consensus       237 ~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          237 DLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            3367889999999999999999999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.92  E-value=1e-25  Score=171.35  Aligned_cols=145  Identities=17%  Similarity=0.231  Sum_probs=115.2

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC---------CcEEEeecCCccccCCC--ccccccceeccceeCch
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS---------NIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~---------~~vkl~Dfg~s~~~~~~--~~~~~~~~~~~~y~aPE   70 (197)
                      .+++.++..++.|+++||+||         |||+|         ..+||+|||+++.....  ........+|+.|+|||
T Consensus       177 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE  256 (367)
T 3l9p_A          177 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE  256 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHH
Confidence            489999999999999999999         77733         34899999999754221  11222346688999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      ++.+.. ++.++||||+||++|+|++ |..||......+....+........                            
T Consensus       257 ~~~~~~-~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~----------------------------  307 (367)
T 3l9p_A          257 AFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP----------------------------  307 (367)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC----------------------------
T ss_pred             HhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------
Confidence            997644 8999999999999999998 9999999888777766654321110                            


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ...++..+.+|+.+||+.||++|||++++++|.++
T Consensus       308 ~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          308 PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            13467889999999999999999999999998765

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.92  E-value=2.6e-25  Score=168.35  Aligned_cols=142  Identities=20%  Similarity=0.252  Sum_probs=110.5

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhhcC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~~   74 (197)
                      +++..++.++.|+++||+||         |||      +++.++|+|||.++......  .......+|+.|+|||++.+
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  269 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  269 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcC
Confidence            99999999999999999999         777      44668999999998654322  22334577899999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++||||+||++|+|++ |..||.+..................                           .....
T Consensus       270 ~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~  321 (359)
T 3vhe_A          270 RV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR---------------------------APDYT  321 (359)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC---------------------------CCTTC
T ss_pred             CC-CCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC---------------------------CCCCC
Confidence            44 8899999999999999998 9999988765444433333211110                           11336


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +..+.+++.+||+.||++|||++++++|
T Consensus       322 ~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          322 TPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            7889999999999999999999999876

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.92  E-value=7.1e-25  Score=161.50  Aligned_cols=149  Identities=21%  Similarity=0.236  Sum_probs=103.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC--ccccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~--~~~~~~~~~~~~y~aPE~   71 (197)
                      ...+++..+..++.|+++||+||         |||      +++.++|+|||.+......  ........+|+.|+|||+
T Consensus       114 ~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~  193 (289)
T 3og7_A          114 ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV  193 (289)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchh
Confidence            45699999999999999999999         777      5567899999999765431  122234568999999999


Q ss_pred             hcC--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          72 LLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        72 ~~~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      +..  ...++.++||||+|++++++++|..||.....................                       ....
T Consensus       194 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~  250 (289)
T 3og7_A          194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD-----------------------LSKV  250 (289)
T ss_dssp             HC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCC-----------------------TTSS
T ss_pred             hcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcc-----------------------hhhc
Confidence            862  344788999999999999999999999887666555544432111110                       0011


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...++..+.+++.+||..||++|||++++++
T Consensus       251 ~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          251 RSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            1346789999999999999999999999985

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.92  E-value=5.9e-25  Score=167.67  Aligned_cols=147  Identities=19%  Similarity=0.224  Sum_probs=113.8

Q ss_pred             HHHhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc--ccceecccee
Q psy6390           5 IQLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY--THEVVTLWYR   67 (197)
Q Consensus         5 ~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~--~~~~~~~~y~   67 (197)
                      ++.....+++..+..++.|+++||+||         |||      +++.+||+|||+++.........  ....++..|+
T Consensus       203 l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~  282 (377)
T 3cbl_A          203 LRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT  282 (377)
T ss_dssp             HHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGS
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcC
Confidence            333445699999999999999999999         677      55778999999998654332211  1234577899


Q ss_pred             CchhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          68 APEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        68 aPE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      |||.+.... ++.++||||+||++|++++ |..||...........+......+                          
T Consensus       283 aPE~~~~~~-~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------------------------  335 (377)
T 3cbl_A          283 APEALNYGR-YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP--------------------------  335 (377)
T ss_dssp             CHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCC--------------------------
T ss_pred             CHhHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------------------------
Confidence            999997644 8899999999999999998 999999888776665554321111                          


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                        ....++..+.+++.+||+.||++|||++++++
T Consensus       336 --~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          336 --CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence              11336788999999999999999999999874

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.92  E-value=4.4e-25  Score=162.86  Aligned_cols=147  Identities=17%  Similarity=0.143  Sum_probs=109.3

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC---------CCCcEEEeecCCccccCCCcc-------ccccceec
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP---------KSNIVKVADFGLARAFGVPVR-------IYTHEVVT   63 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp---------~~~~vkl~Dfg~s~~~~~~~~-------~~~~~~~~   63 (197)
                      ..++++..+..++.|+++||+||         |||         +++.+||+|||.++.......       ......+|
T Consensus        99 ~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt  178 (296)
T 4hgt_A           99 SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT  178 (296)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCC
Confidence            45799999999999999999999         565         445689999999987644322       12345789


Q ss_pred             cceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH---HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcc
Q psy6390          64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI---DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE  140 (197)
Q Consensus        64 ~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (197)
                      +.|+|||.+.+.. ++.++||||+||++|++++|..||.+....   .....+......                     
T Consensus       179 ~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------  236 (296)
T 4hgt_A          179 ARYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS---------------------  236 (296)
T ss_dssp             GGGCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH---------------------
T ss_pred             ccccchHHhcCCC-CCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc---------------------
Confidence            9999999998755 889999999999999999999999764321   111111110000                     


Q ss_pred             cchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                         .........++..+.+++.+||+.||++|||++++++
T Consensus       237 ---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          237 ---TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             ---SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             ---chhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence               0011122456889999999999999999999999875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=4.1e-25  Score=162.61  Aligned_cols=146  Identities=17%  Similarity=0.182  Sum_probs=115.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc---cccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI---YTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~---~~~~~~~~~y~aPE   70 (197)
                      ...+++..+..++.|+++||.||         |+|      +++.++|+|||.+.........   .....+|+.|+|||
T Consensus       104 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  183 (287)
T 1u59_A          104 REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE  183 (287)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHH
T ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHH
Confidence            34699999999999999999999         777      4467899999999876443221   12334578999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      ++.+.. ++.++|+||+|+++|++++ |..||......+....+......                            ..
T Consensus       184 ~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~----------------------------~~  234 (287)
T 1u59_A          184 CINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM----------------------------EC  234 (287)
T ss_dssp             HHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC----------------------------CC
T ss_pred             HhccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcC----------------------------CC
Confidence            997644 7899999999999999998 99999988777666555432110                            01


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKY  183 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~  183 (197)
                      ...++..+.+++.+||..||++||+++++++|.+
T Consensus       235 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          235 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            1346789999999999999999999999998753

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.92  E-value=9.8e-25  Score=170.20  Aligned_cols=142  Identities=20%  Similarity=0.271  Sum_probs=114.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.||++||+||         |||      +++.+||+|||+++....... ......++..|+|||++.
T Consensus       279 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~  358 (454)
T 1qcf_A          279 SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN  358 (454)
T ss_dssp             HTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhc
Confidence            3689999999999999999999         777      557789999999987654221 122334578899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++||||+||++|++++ |..||.+....+....+......+.                            ...
T Consensus       359 ~~~-~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~----------------------------~~~  409 (454)
T 1qcf_A          359 FGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR----------------------------PEN  409 (454)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC----------------------------CTT
T ss_pred             cCC-CCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------CCC
Confidence            644 8999999999999999999 9999999888777766654322111                            134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ++..+.++|.+||..||++|||++++++
T Consensus       410 ~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          410 CPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            6789999999999999999999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=7.7e-25  Score=159.37  Aligned_cols=144  Identities=17%  Similarity=0.203  Sum_probs=113.3

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++..+..++.|+++||+||         |+|      +++.++|+|||.+........ ......++..|+|||++
T Consensus        98 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~  177 (267)
T 3t9t_A           98 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF  177 (267)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhh
Confidence            34589999999999999999999         777      446689999999986644221 12234567889999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+|+++|++++ |..||...........+.......                            ...
T Consensus       178 ~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~----------------------------~~~  228 (267)
T 3t9t_A          178 SFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY----------------------------KPR  228 (267)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC----------------------------CCT
T ss_pred             cCCC-ccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC----------------------------CCc
Confidence            7644 7899999999999999999 899999888777766664421110                            012


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+..+.+++.+||+.||++|||+++++++
T Consensus       229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            357889999999999999999999999864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=2e-24  Score=162.15  Aligned_cols=145  Identities=17%  Similarity=0.209  Sum_probs=107.8

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCc
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAP   69 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aP   69 (197)
                      ....+++..+..++.|+++||+||         |||      +++.+||+|||.++.......   ......++..|+||
T Consensus       140 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  219 (333)
T 1mqb_A          140 KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP  219 (333)
T ss_dssp             TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCc
Confidence            335699999999999999999999         676      557789999999987644221   11223457789999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      |.+.+.. ++.++||||+||++|++++ |..||......+....+......+                            
T Consensus       220 E~~~~~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~----------------------------  270 (333)
T 1mqb_A          220 EAISYRK-FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP----------------------------  270 (333)
T ss_dssp             HHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC----------------------------
T ss_pred             hhcccCC-CCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCC----------------------------
Confidence            9997644 8899999999999999998 999998888777666654321111                            


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ....++..+.+++.+||+.||++||++.+++++
T Consensus       271 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          271 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            013367889999999999999999999998764

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.92  E-value=1.6e-25  Score=180.01  Aligned_cols=170  Identities=20%  Similarity=0.196  Sum_probs=113.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCCC---------cEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKSN---------IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~~---------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .+++..++.++.|++.||+||         |+|+|.         .++|+|||.+........ .....+|+.|+|||.+
T Consensus       117 ~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~-~~~~~gt~~Y~APE~l  195 (676)
T 3qa8_A          117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL-CTEFVGTLQYLAPELL  195 (676)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCC-CCCCCSCCTTCSSCSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccc-cccccCCcccCChHHh
Confidence            589999999999999999999         777442         378999999987654332 3345789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+.. ++.++||||+||++|++++|..||................................+....+..     ......
T Consensus       196 ~~~~-~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p-----~~l~~~  269 (676)
T 3qa8_A          196 EQKK-YTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTP-----NHLSGI  269 (676)
T ss_dssp             CCSC-CSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCS-----CCCCGG
T ss_pred             ccCC-CCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCc-----hhhchh
Confidence            7644 8999999999999999999999998765443221111000000000000111111111111100     111233


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ++..+.++|.+||..||++|||++++++||||+.+
T Consensus       270 ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l  304 (676)
T 3qa8_A          270 LAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL  304 (676)
T ss_dssp             GHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred             hhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence            56789999999999999999999999999999754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.92  E-value=8.6e-25  Score=166.03  Aligned_cols=156  Identities=13%  Similarity=0.057  Sum_probs=110.2

Q ss_pred             HHHhhhcCCHHHHHHHHHHHHhhhccc---------ccC--------CCCcEEEeecCCccccCCCccc-------cccc
Q psy6390           5 IQLEWEQVGTYQVKITTRLFLQATSFC---------IKP--------KSNIVKVADFGLARAFGVPVRI-------YTHE   60 (197)
Q Consensus         5 ~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp--------~~~~vkl~Dfg~s~~~~~~~~~-------~~~~   60 (197)
                      ++.....+++..+..++.||+.||+||         |||        .++.+||+|||+++........       ....
T Consensus       142 ~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~  221 (364)
T 3op5_A          142 YEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCH  221 (364)
T ss_dssp             HHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCC
T ss_pred             HHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCccccc
Confidence            333335699999999999999999999         666        4567899999999766432211       1234


Q ss_pred             eeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHH-HHHHHhhcCCCCCCCCCCCCCCCCCCCCCc
Q psy6390          61 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ-LFRIFRVLTTPTEDNWPGVSKLPDYKTTFP  139 (197)
Q Consensus        61 ~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (197)
                      .||+.|+|||++.+.. ++.++||||+||++|+|++|..||.+...... ..........                 ...
T Consensus       222 ~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~-----------------~~~  283 (364)
T 3op5_A          222 DGTIEFTSIDAHNGVA-PSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRE-----------------NIA  283 (364)
T ss_dssp             CCCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHH-----------------CHH
T ss_pred             CCCCCccCHHHhCCCC-CCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhh-----------------hHH
Confidence            5899999999998755 89999999999999999999999986332222 1111110000                 000


Q ss_pred             ccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .....+.  .....+..+.+++..||..||++||+++++++
T Consensus       284 ~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          284 SLMDKCF--PAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHS--CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhc--ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            0000000  01457889999999999999999999999774

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.92  E-value=1.2e-24  Score=161.88  Aligned_cols=143  Identities=15%  Similarity=0.115  Sum_probs=107.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..++.++.|+++||.||         |||      +++.+||+|||.+........  ......+++.|+|||.+
T Consensus       142 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  221 (313)
T 3brb_A          142 KHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL  221 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhh
Confidence            4599999999999999999999         777      556789999999986643321  12234567899999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+|+++|+|++ |..||...........+.......                            ...
T Consensus       222 ~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~  272 (313)
T 3brb_A          222 ADRV-YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLK----------------------------QPE  272 (313)
T ss_dssp             HSSC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC----------------------------CBT
T ss_pred             cCCC-ccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCC----------------------------CCc
Confidence            8744 8899999999999999999 899998877766665554321110                            113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++..+.+++.+||..||++|||+++++++
T Consensus       273 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          273 DCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            467899999999999999999999999864

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.92  E-value=7.7e-25  Score=162.86  Aligned_cols=143  Identities=17%  Similarity=0.188  Sum_probs=112.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++.++..++.|+++||+||         |||      +++.++|+|||.++.......  ......+++.|+|||.+
T Consensus       145 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  224 (314)
T 2ivs_A          145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL  224 (314)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH
T ss_pred             cCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhh
Confidence            3489999999999999999999         777      556789999999986644322  12234567889999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|+|++ |..||.+.........+......                            ....
T Consensus       225 ~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  275 (314)
T 2ivs_A          225 FDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM----------------------------ERPD  275 (314)
T ss_dssp             HHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC----------------------------CCCT
T ss_pred             cCCC-cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcC----------------------------CCCc
Confidence            7644 7899999999999999999 99999887766555544331110                            0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++..+.+++.+||+.||++|||+++++++
T Consensus       276 ~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          276 NCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            467899999999999999999999999864

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.92  E-value=2.1e-24  Score=161.16  Aligned_cols=143  Identities=20%  Similarity=0.247  Sum_probs=113.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|+++||+||         |||      +++.+||+|||.++......  .......+|+.|+|||.+
T Consensus       133 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  212 (322)
T 1p4o_A          133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL  212 (322)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHH
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhh
Confidence            3469999999999999999999         777      55788999999997654322  122334668899999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|++++ |..||.+.........+......                            ....
T Consensus       213 ~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  263 (322)
T 1p4o_A          213 KDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL----------------------------DKPD  263 (322)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCC----------------------------CCCT
T ss_pred             ccCC-CCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcC----------------------------CCCC
Confidence            7644 8899999999999999999 89999988877766665432111                            0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++..+.+++.+||+.||++|||++++++|
T Consensus       264 ~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          264 NCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            467889999999999999999999999876

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.91  E-value=1.8e-24  Score=162.38  Aligned_cols=143  Identities=21%  Similarity=0.271  Sum_probs=113.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|+++||+||         |||      .++.+||+|||.++.......  ......+++.|+|||++
T Consensus       152 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  231 (334)
T 2pvf_A          152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL  231 (334)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHh
Confidence            3589999999999999999999         777      557789999999986654322  12233567889999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|++++ |..||.+....+....+.......                            ...
T Consensus       232 ~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~  282 (334)
T 2pvf_A          232 FDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----------------------------KPA  282 (334)
T ss_dssp             HHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCC----------------------------CCT
T ss_pred             cCCC-cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCC----------------------------CCc
Confidence            7644 7899999999999999999 999999888776666554421110                            113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++..+.+++.+||..||++|||+++++++
T Consensus       283 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          283 NCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            467899999999999999999999999864

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.91  E-value=1.8e-24  Score=160.78  Aligned_cols=143  Identities=16%  Similarity=0.263  Sum_probs=111.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|+++||+||         |||      +++.+||+|||.+........  ......+|+.|+|||.+.
T Consensus       141 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  220 (313)
T 1t46_A          141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhc
Confidence            489999999999999999999         777      556789999999987654322  223446788999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++++|++ |..||.+.................                           .....
T Consensus       221 ~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~  272 (313)
T 1t46_A          221 NCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM---------------------------LSPEH  272 (313)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCC---------------------------CCCTT
T ss_pred             CCC-CChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCC---------------------------CCccc
Confidence            644 8899999999999999998 999998876554444433321110                           00134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .+..+.+++.+||+.||++|||+++++++
T Consensus       273 ~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          273 APAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            67899999999999999999999999864

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.91  E-value=1.1e-24  Score=163.32  Aligned_cols=146  Identities=15%  Similarity=0.132  Sum_probs=108.4

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCCC------Cc-----EEEeecCCccccCCCcc-------ccccce
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPKS------NI-----VKVADFGLARAFGVPVR-------IYTHEV   61 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~-----vkl~Dfg~s~~~~~~~~-------~~~~~~   61 (197)
                      ...+++..+..++.|+++||+||         |||+|      +.     +||+|||+++.......       ......
T Consensus        99 ~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~  178 (330)
T 2izr_A           99 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLT  178 (330)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcC
Confidence            45799999999999999999999         77733      33     89999999986543221       123457


Q ss_pred             eccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC---hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy6390          62 VTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS---EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF  138 (197)
Q Consensus        62 ~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (197)
                      ||+.|+|||++.+.. ++.++||||+||++|+|++|..||.+..   .......+.......+                 
T Consensus       179 gt~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~-----------------  240 (330)
T 2izr_A          179 GTARYMSINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP-----------------  240 (330)
T ss_dssp             SCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC-----------------
T ss_pred             CCccccChHHHcCCC-CCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC-----------------
Confidence            899999999998744 8999999999999999999999998743   2233333322110000                 


Q ss_pred             cccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         139 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                             ........+ .+.+++.+||..||.+||+++++++
T Consensus       241 -------~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          241 -------IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             -------HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -------HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                   011112234 8999999999999999999998765

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1.1e-24  Score=164.03  Aligned_cols=144  Identities=17%  Similarity=0.220  Sum_probs=111.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.||++||+||         |||      .++.++|+|||.+.......  .......+|+.|+|||++.
T Consensus       168 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  247 (344)
T 1rjb_A          168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF  247 (344)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc
Confidence            489999999999999999999         777      45678999999998654322  1233456788999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++|+|++ |..||.+................+                           .....
T Consensus       248 ~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~  299 (344)
T 1rjb_A          248 EGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKM---------------------------DQPFY  299 (344)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCC---------------------------CCCTT
T ss_pred             cCC-CChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCC---------------------------CCCCC
Confidence            644 8899999999999999998 999998876554444443311110                           01133


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHK  182 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp  182 (197)
                      .+..+.+++.+||..||++|||++++++|-
T Consensus       300 ~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          300 ATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            678999999999999999999999999765

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.91  E-value=2.2e-24  Score=157.31  Aligned_cols=143  Identities=21%  Similarity=0.261  Sum_probs=106.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc------------ccCC--------------CCcEEEeecCCccccCCCcccccccee
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC------------IKPK--------------SNIVKVADFGLARAFGVPVRIYTHEVV   62 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l------------lkp~--------------~~~vkl~Dfg~s~~~~~~~~~~~~~~~   62 (197)
                      .+++++..+..++.|+++||+||            |||+              ++.++|+|||.+........  ....+
T Consensus        99 ~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~  176 (271)
T 3dtc_A           99 GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAG  176 (271)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---------------C
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccc--cCCCC
Confidence            35699999999999999999998            5552              56689999999986544322  23478


Q ss_pred             ccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy6390          63 TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS  142 (197)
Q Consensus        63 ~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (197)
                      ++.|+|||.+.+.. ++.++|+||+|++++++++|..||.+.+.......+.......                      
T Consensus       177 ~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------  233 (271)
T 3dtc_A          177 AYAWMAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL----------------------  233 (271)
T ss_dssp             CGGGSCHHHHHHCC-CSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCC----------------------
T ss_pred             ccceeCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCC----------------------
Confidence            99999999997644 8899999999999999999999999887766665544321110                      


Q ss_pred             hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       143 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                           .....++..+.+++.+||+.||++|||++|+++|
T Consensus       234 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          234 -----PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence                 0113467899999999999999999999999864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=4.2e-24  Score=157.77  Aligned_cols=143  Identities=20%  Similarity=0.202  Sum_probs=110.0

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc----cccccceeccceeCc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV----RIYTHEVVTLWYRAP   69 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~----~~~~~~~~~~~y~aP   69 (197)
                      ...+++..+..++.|+++||+||         |||      +++.++|+|||.++......    .......++..|+||
T Consensus       118 ~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aP  197 (298)
T 3pls_A          118 QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL  197 (298)
T ss_dssp             TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccCh
Confidence            45689999999999999999999         777      55689999999998654322    112234668899999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      |.+.+.. ++.++||||+||++|++++ +.+||...+..+....+......+.                           
T Consensus       198 E~~~~~~-~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------  249 (298)
T 3pls_A          198 ESLQTYR-FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ---------------------------  249 (298)
T ss_dssp             HHHTTCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCC---------------------------
T ss_pred             hhhccCC-CChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCC---------------------------
Confidence            9997754 8899999999999999999 5566666665555554443221110                           


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                       ....+..+.+++.+||+.||++|||++++++
T Consensus       250 -~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          250 -PEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence             1336788999999999999999999999875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.91  E-value=2.3e-24  Score=158.74  Aligned_cols=144  Identities=19%  Similarity=0.210  Sum_probs=112.0

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE   70 (197)
                      ...+++..+..++.|+++||+||         |+|      .++.++|+|||.+........   ......++..|+|||
T Consensus       115 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (291)
T 1u46_A          115 QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE  194 (291)
T ss_dssp             GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHH
T ss_pred             cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCch
Confidence            35699999999999999999999         777      446789999999987654322   122345677899999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .+.+.. ++.++|+||+|++++++++ |..||...........+.......+                           .
T Consensus       195 ~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~  246 (291)
T 1u46_A          195 SLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP---------------------------R  246 (291)
T ss_dssp             HHHHCE-EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC---------------------------C
T ss_pred             hhcCCC-CCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCC---------------------------C
Confidence            997644 7889999999999999999 9999998887777666643211110                           1


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...++..+.+++.+||..||++|||+.++++
T Consensus       247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            1346789999999999999999999999986

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=7.1e-25  Score=166.96  Aligned_cols=144  Identities=18%  Similarity=0.154  Sum_probs=101.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc----ccccceeccceeCc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVVTLWYRAP   69 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~~~~y~aP   69 (197)
                      ...+++..+..++.|+++||+||         |||      +++.+||+|||+++.......    ......+|+.|+||
T Consensus       186 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aP  265 (373)
T 3c1x_A          186 THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL  265 (373)
T ss_dssp             TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccCh
Confidence            34588999999999999999999         777      557789999999986543211    12234567889999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      |.+.+.. ++.++||||+||++|++++ |..||...+..+....+.......                            
T Consensus       266 E~~~~~~-~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~----------------------------  316 (373)
T 3c1x_A          266 ESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL----------------------------  316 (373)
T ss_dssp             HHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCC----------------------------
T ss_pred             HHhcCCC-CCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCC----------------------------
Confidence            9997644 8899999999999999999 788887765554444443211110                            


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ....++..+.+++.+||+.||++|||+++++++
T Consensus       317 ~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          317 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            013467889999999999999999999998864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.91  E-value=1.8e-24  Score=163.13  Aligned_cols=147  Identities=15%  Similarity=0.055  Sum_probs=108.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCC------CC--cEEEeecCCccccCCCcc-------ccccceeccce
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPK------SN--IVKVADFGLARAFGVPVR-------IYTHEVVTLWY   66 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~--~vkl~Dfg~s~~~~~~~~-------~~~~~~~~~~y   66 (197)
                      .+++.+++.++.||++||+||         |||+      ++  .+||+|||+++.......       ......+|..|
T Consensus       147 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y  226 (345)
T 2v62_A          147 TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEF  226 (345)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccc
Confidence            699999999999999999999         7773      34  899999999976643211       12345789999


Q ss_pred             eCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCC--ChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchh
Q psy6390          67 RAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGD--SEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF  144 (197)
Q Consensus        67 ~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (197)
                      +|||++.+.. ++.++||||+||++|+|++|..||...  ................+                  .    
T Consensus       227 ~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------------~----  283 (345)
T 2v62_A          227 TSLDAHKGVA-LSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELP------------------Q----  283 (345)
T ss_dssp             CCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTT------------------H----
T ss_pred             cCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhccccc------------------H----
Confidence            9999998754 899999999999999999999999652  22222222111111100                  0    


Q ss_pred             hhhhc--cCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         145 CLDKH--VKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       145 ~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .....  ...++..+.+++.+||..||++||+++++++
T Consensus       284 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          284 SVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            00011  1257889999999999999999999999875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.91  E-value=1.1e-24  Score=163.93  Aligned_cols=142  Identities=17%  Similarity=0.266  Sum_probs=111.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++.+++.++.||++||.||         |||      +++.+||+|||.++......  .......+|+.|+|||.+
T Consensus       169 ~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  248 (343)
T 1luf_A          169 PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI  248 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhh
Confidence            4699999999999999999999         777      44668999999997654322  122334678899999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++|+||+||++|++++ |..||.+.........+......                            ....
T Consensus       249 ~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~  299 (343)
T 1luf_A          249 FYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL----------------------------ACPE  299 (343)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC----------------------------CCCT
T ss_pred             ccCC-cCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcC----------------------------CCCC
Confidence            7644 8899999999999999998 99999988877766665432111                            0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .++..+.+++.+||+.||++||+++++++
T Consensus       300 ~~~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          300 NCPLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            46789999999999999999999999985

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.91  E-value=1.6e-24  Score=165.09  Aligned_cols=143  Identities=17%  Similarity=0.197  Sum_probs=101.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc---cccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI---YTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~---~~~~~~~~~y~aPE   70 (197)
                      ...+++.++..++.|+++||+||         |||      .++.+||+|||+++........   .....++..|+|||
T Consensus       141 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE  220 (373)
T 2qol_A          141 DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE  220 (373)
T ss_dssp             TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChh
Confidence            34699999999999999999999         777      5577899999999876543211   11223467899999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .+.+.. ++.++||||+||++|++++ |..||......+....+......+.                            
T Consensus       221 ~~~~~~-~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~----------------------------  271 (373)
T 2qol_A          221 AIAYRK-FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP----------------------------  271 (373)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCC----------------------------
T ss_pred             hhccCC-cCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------
Confidence            997644 8999999999999999997 9999998887776666543221111                            


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...++..+.+++.+||+.||++||+++++++
T Consensus       272 ~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            1236688999999999999999999999765

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.91  E-value=2.5e-24  Score=167.85  Aligned_cols=149  Identities=21%  Similarity=0.287  Sum_probs=112.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||         |||      +++.+||+|||+++....... ......++..|+|||.+.
T Consensus       275 ~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~  354 (452)
T 1fmk_A          275 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL  354 (452)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHh
Confidence            4599999999999999999999         777      446689999999987643221 122345578899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++||||+||++|++++ |..||.+....+....+......+                            ....
T Consensus       355 ~~~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~----------------------------~~~~  405 (452)
T 1fmk_A          355 YGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP----------------------------CPPE  405 (452)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC----------------------------CCTT
T ss_pred             cCC-CCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CCCC
Confidence            644 8999999999999999999 999999888877776665421111                            1134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc--CcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK--HKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~--hp~~~~~  187 (197)
                      ++..+.+++.+||..||++|||++++++  +.++...
T Consensus       406 ~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence            6789999999999999999999999886  3555543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.91  E-value=1.3e-24  Score=164.25  Aligned_cols=150  Identities=11%  Similarity=0.049  Sum_probs=110.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCC--cEEEeecCCccccCCCcc-------ccccceeccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSN--IVKVADFGLARAFGVPVR-------IYTHEVVTLW   65 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~--~vkl~Dfg~s~~~~~~~~-------~~~~~~~~~~   65 (197)
                      ..+++..+..++.|+++||+||         |||      .++  .++|+|||+++.......       ......+|+.
T Consensus       154 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~  233 (352)
T 2jii_A          154 HVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLE  233 (352)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCcc
Confidence            5699999999999999999999         777      334  789999999986643221       1123478999


Q ss_pred             eeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC-hHHHHHH-HHhhcCCCCCCCCCCCCCCCCCCCCCcccch
Q psy6390          66 YRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-EIDQLFR-IFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN  143 (197)
Q Consensus        66 y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (197)
                      |+|||++.+.. ++.++||||+||++|+|++|..||.... ....... .......+.. ...                 
T Consensus       234 y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------------  294 (352)
T 2jii_A          234 FISMDLHKGCG-PSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGP-FVG-----------------  294 (352)
T ss_dssp             TCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCC-EEC-----------------
T ss_pred             ccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhh-hhh-----------------
Confidence            99999997754 8899999999999999999999998753 2222222 2211111110 000                 


Q ss_pred             hhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       144 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                        .......++..+.+++.+||..||++|||++++++
T Consensus       295 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          295 --PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             --TTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             --hccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence              00011346889999999999999999999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.91  E-value=3.5e-24  Score=166.89  Aligned_cols=137  Identities=20%  Similarity=0.238  Sum_probs=108.6

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCCC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQ   76 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~~   76 (197)
                      +++..+..++.|+++||+||         |||      +++.+||+|||+++......   ....++..|+|||.+.+..
T Consensus       286 ~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~---~~~~~~~~y~aPE~~~~~~  362 (450)
T 1k9a_A          286 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKK  362 (450)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCCTTTSCHHHHHSSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc---cCCCCCcceeCHHHhcCCC
Confidence            79999999999999999999         666      55778999999998654322   1235678999999998755


Q ss_pred             CCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          77 RYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        77 ~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                       ++.++||||+||++|++++ |..||......+....+......                            .....++.
T Consensus       363 -~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~----------------------------~~p~~~~~  413 (450)
T 1k9a_A          363 -FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM----------------------------DAPDGCPP  413 (450)
T ss_dssp             -CCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC----------------------------CCCTTCCH
T ss_pred             -CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCcCCH
Confidence             8999999999999999998 99999887766666555432111                            01134678


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+.++|.+||+.||++|||+.++++
T Consensus       414 ~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          414 AVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999999999999874

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.91  E-value=1.1e-24  Score=163.11  Aligned_cols=145  Identities=17%  Similarity=0.227  Sum_probs=113.5

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCC---------CCcEEEeecCCccccCCCc--cccccceeccceeCch
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPK---------SNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPE   70 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~---------~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE   70 (197)
                      .+++..+..++.|+++||.||         |+|+         +..++|+|||.+.......  .......+++.|+|||
T Consensus       136 ~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  215 (327)
T 2yfx_A          136 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE  215 (327)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHh
Confidence            489999999999999999999         6662         3458999999987543221  1122345688999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .+.+.. ++.++||||+||++|++++ |..||...........+.......                            .
T Consensus       216 ~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~  266 (327)
T 2yfx_A          216 AFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD----------------------------P  266 (327)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC----------------------------C
T ss_pred             HhcCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCC----------------------------C
Confidence            997644 8899999999999999998 999999887776666554321110                            0


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ...++..+.+++.+||+.||++||+++++++|.|+
T Consensus       267 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          267 PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            13467889999999999999999999999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.91  E-value=3e-24  Score=158.55  Aligned_cols=159  Identities=16%  Similarity=0.181  Sum_probs=103.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE   70 (197)
                      ..++++..+..++.|++.||+||         |||      +++.+||+|||.++.......   ......++..|+|||
T Consensus       108 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  187 (295)
T 3ugc_A          108 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE  187 (295)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHH
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcH
Confidence            34599999999999999999999         777      446789999999987644321   122335677899999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      .+.+.. ++.++||||+|+++|++++|..|+......  .....   +.........       ................
T Consensus       188 ~~~~~~-~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--~~~~~---~~~~~~~~~~-------~~~~~~~~~~~~~~~~  254 (295)
T 3ugc_A          188 SLTESK-FSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMI---GNDKQGQMIV-------FHLIELLKNNGRLPRP  254 (295)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHHTTCTTCSHHHH--HHHHH---CTTCCTHHHH-------HHHHHHHHTTCCCCCC
T ss_pred             HhcCCC-CChHHHHHHHHHHHHHHHhcccccCCChHH--HHhhh---cCccccchhH-------HHHHHHHhccCcCCCC
Confidence            998755 899999999999999999999887643211  11100   0000000000       0000000000000112


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..++..+.+++.+||+.||++|||++++++
T Consensus       255 ~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          255 DGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            457889999999999999999999999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.91  E-value=4.3e-24  Score=157.06  Aligned_cols=142  Identities=20%  Similarity=0.281  Sum_probs=112.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC------CcEEEeecCCccccCCCc-cccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|++.||+||         |||+|      +.++|+|||.+....... .......+++.|+|||.+.
T Consensus       106 ~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  185 (288)
T 3kfa_A          106 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA  185 (288)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHH
T ss_pred             CCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhc
Confidence            4599999999999999999999         77744      568999999998765432 2233446688999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++|+||+|++++++++ |..||...+.......+.......                            ....
T Consensus       186 ~~~-~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~  236 (288)
T 3kfa_A          186 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME----------------------------RPEG  236 (288)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC----------------------------CCTT
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCC----------------------------CCCC
Confidence            654 8899999999999999999 999998877666555554321111                            1134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ++..+.+++.+||..||++|||++++++
T Consensus       237 ~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          237 CPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            6789999999999999999999999875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.91  E-value=1.1e-24  Score=163.03  Aligned_cols=142  Identities=22%  Similarity=0.250  Sum_probs=109.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.|+++||+||         |||+      ++.+||+|||+++...... ......+++.|+|||++.+
T Consensus       137 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~  215 (327)
T 1fvr_A          137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNY  215 (327)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccc-cccCCCCCccccChhhhcc
Confidence            3699999999999999999999         7774      4578999999987443211 1223355788999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++||||+||++|+|++ |..||.+.........+......                            .....+
T Consensus       216 ~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  266 (327)
T 1fvr_A          216 SV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL----------------------------EKPLNC  266 (327)
T ss_dssp             CE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCC----------------------------CCCTTB
T ss_pred             cc-CCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCC----------------------------CCCCCC
Confidence            44 7899999999999999998 99999988877666554332110                            011346


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +..+.+++.+||..||++|||+++++++
T Consensus       267 ~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          267 DDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            7889999999999999999999999875

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.91  E-value=2.2e-24  Score=160.49  Aligned_cols=142  Identities=20%  Similarity=0.262  Sum_probs=109.7

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCc--cccccceeccceeCchhhcC
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~~   74 (197)
                      +++..+..++.|+++||.||         |||+      ++.+||+|||.++......  .......+|+.|+|||++.+
T Consensus       145 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  224 (316)
T 2xir_A          145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  224 (316)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcc
Confidence            89999999999999999999         7774      4668999999998664322  22334567889999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++||||+||++|++++ |..||.+.................                           ......
T Consensus       225 ~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~  276 (316)
T 2xir_A          225 RV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM---------------------------RAPDYT  276 (316)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCC---------------------------CCCTTC
T ss_pred             cc-ccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccC---------------------------CCCCCC
Confidence            44 8899999999999999998 999998766444333322211110                           011336


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +..+.+++.+||+.||++|||++++++|
T Consensus       277 ~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          277 TPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            7889999999999999999999999876

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.91  E-value=3.4e-24  Score=158.37  Aligned_cols=143  Identities=17%  Similarity=0.150  Sum_probs=109.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc----ccccceeccceeCc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVVTLWYRAP   69 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~~~~y~aP   69 (197)
                      ...+++..+..++.|+++||+||         |||      +++.+||+|||.++.......    ......+|+.|+||
T Consensus       122 ~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aP  201 (298)
T 3f66_A          122 THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL  201 (298)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccCh
Confidence            45689999999999999999999         777      556789999999986644321    12334567889999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      |.+.+.. ++.++|+||+|++++++++ +.+||......+....+........                           
T Consensus       202 E~~~~~~-~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------  253 (298)
T 3f66_A          202 ESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---------------------------  253 (298)
T ss_dssp             HHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCC---------------------------
T ss_pred             HHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCC---------------------------
Confidence            9997644 8899999999999999999 6777777666555555543211110                           


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                       ...++..+.+++.+||+.||++|||++++++
T Consensus       254 -~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          254 -PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             1335788999999999999999999999885

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.91  E-value=5.4e-24  Score=155.93  Aligned_cols=141  Identities=18%  Similarity=0.246  Sum_probs=112.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhcC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~~   74 (197)
                      .+++..+..++.|+++||+||         |+|      +++.++|+|||.+........ ......++..|+|||.+.+
T Consensus       105 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  184 (279)
T 1qpc_A          105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY  184 (279)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhcc
Confidence            699999999999999999999         666      556789999999987654322 2223456788999999976


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++||||+|++++++++ |..||.+....+....+.......                            ....+
T Consensus       185 ~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  235 (279)
T 1qpc_A          185 GT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV----------------------------RPDNC  235 (279)
T ss_dssp             CE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC----------------------------CCTTC
T ss_pred             CC-CCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCC----------------------------Ccccc
Confidence            44 7899999999999999999 999999888777666654321110                            11346


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      +..+.+++.+||..||++|||++++++
T Consensus       236 ~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          236 PEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            789999999999999999999999875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.91  E-value=3.5e-24  Score=172.44  Aligned_cols=143  Identities=17%  Similarity=0.192  Sum_probs=109.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc---cccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI---YTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~---~~~~~~~~~y~aPE   70 (197)
                      ...+++..+..++.||++||+||         |||      +++.+||+|||+++........   .....+++.|+|||
T Consensus       430 ~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE  509 (613)
T 2ozo_A          430 REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE  509 (613)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHh
Confidence            34699999999999999999999         777      4467899999999876443221   11234467899999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      ++.+.. ++.++||||+||++|+|++ |..||.+....+....+......                            ..
T Consensus       510 ~~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~----------------------------~~  560 (613)
T 2ozo_A          510 CINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM----------------------------EC  560 (613)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCC----------------------------CC
T ss_pred             hhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CC
Confidence            997644 8999999999999999998 99999988877777666542111                            01


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...++..+.++|.+||..||++||+++++++
T Consensus       561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             CCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            1347789999999999999999999999753

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.91  E-value=1.9e-24  Score=158.99  Aligned_cols=140  Identities=14%  Similarity=0.132  Sum_probs=105.7

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccCCC------Cc--------EEEeecCCccccCCCccccccceecc
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKPKS------NI--------VKVADFGLARAFGVPVRIYTHEVVTL   64 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~--------vkl~Dfg~s~~~~~~~~~~~~~~~~~   64 (197)
                      ....+++..+..++.|+++||.||         |||+|      +.        ++|+|||.+......    ....++.
T Consensus       106 ~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~  181 (289)
T 4fvq_A          106 NKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK----DILQERI  181 (289)
T ss_dssp             TGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH----HHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc----cccCCcC
Confidence            334599999999999999999999         77743      22        899999998755432    2235688


Q ss_pred             ceeCchhhcCCCCCCCchhhhhhhHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccch
Q psy6390          65 WYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN  143 (197)
Q Consensus        65 ~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (197)
                      .|+|||++.+...++.++||||+||++|++++| ..|+............... ..                        
T Consensus       182 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~-~~------------------------  236 (289)
T 4fvq_A          182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-HQ------------------------  236 (289)
T ss_dssp             TTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-CC------------------------
T ss_pred             cccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhcc-CC------------------------
Confidence            999999998745589999999999999999994 5566555554444333221 00                        


Q ss_pred             hhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       144 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                           .....+..+.+++.+||+.||++|||++++++|
T Consensus       237 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          237 -----LPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             -----CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             -----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                 012245678899999999999999999999865

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.91  E-value=9e-24  Score=157.02  Aligned_cols=145  Identities=21%  Similarity=0.143  Sum_probs=106.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcccc--------------cc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIY--------------TH   59 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~--------------~~   59 (197)
                      ...+++.++..++.|+++||+||         |||      +++.+||+|||.++.........              ..
T Consensus       102 ~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (310)
T 3s95_A          102 DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT  181 (310)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccc
Confidence            45699999999999999999999         777      44678999999998664322111              14


Q ss_pred             ceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCc
Q psy6390          60 EVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP  139 (197)
Q Consensus        60 ~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (197)
                      ..||+.|+|||++.+.. ++.++||||+|+++|++++|..|+........                       ...   .
T Consensus       182 ~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~-----------------------~~~---~  234 (310)
T 3s95_A          182 VVGNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM-----------------------DFG---L  234 (310)
T ss_dssp             CCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCT-----------------------TSS---B
T ss_pred             cCCCcceeCHHHhcCCC-CCcHHHHHHHHHHHHHHhcCCCCCcchhhhHH-----------------------HHh---h
Confidence            46899999999998744 89999999999999999999888754321000                       000   0


Q ss_pred             ccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .............++..+.+++.+||+.||++|||++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          235 NVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             CHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            00011111223557889999999999999999999999885

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.91  E-value=9.9e-26  Score=168.54  Aligned_cols=165  Identities=19%  Similarity=0.154  Sum_probs=104.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-------------------ccC------CCCcEEEeecCCccccCCCcc--cccccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-------------------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVV   62 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-------------------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~   62 (197)
                      ..+++..+..++.|+++||+||                   |||      +++.+||+|||.++.......  ......+
T Consensus       116 ~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~g  195 (322)
T 3soc_A          116 NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG  195 (322)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCcc
Confidence            5699999999999999999988                   566      456789999999976644322  2233578


Q ss_pred             ccceeCchhhcCCC----CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy6390          63 TLWYRAPEVLLGSQ----RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF  138 (197)
Q Consensus        63 ~~~y~aPE~~~~~~----~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (197)
                      |+.|+|||++.+..    .++.++||||+||++|+|++|..||.+................+..................
T Consensus       196 t~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (322)
T 3soc_A          196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVL  275 (322)
T ss_dssp             CGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             CccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCc
Confidence            99999999997632    24567899999999999999999997643211000000000000000000000000000000


Q ss_pred             cccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         139 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ....      .....+..+.+|+.+||+.||++|||++++++
T Consensus       276 ~~~~------~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          276 RDYW------QKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             CGGG------GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccc------cccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            0000      00112346899999999999999999999985

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.91  E-value=2.4e-24  Score=168.78  Aligned_cols=147  Identities=16%  Similarity=0.146  Sum_probs=110.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCC---------CCcEEEeecCCccccCCCcc-------ccccceec
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPK---------SNIVKVADFGLARAFGVPVR-------IYTHEVVT   63 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~---------~~~vkl~Dfg~s~~~~~~~~-------~~~~~~~~   63 (197)
                      ...+++..++.++.||+.||+||         |||+         ++.+||+|||+++.......       ......||
T Consensus        97 ~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt  176 (483)
T 3sv0_A           97 SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT  176 (483)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCC
Confidence            45799999999999999999999         6663         45679999999987644322       12245789


Q ss_pred             cceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh---HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcc
Q psy6390          64 LWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE  140 (197)
Q Consensus        64 ~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (197)
                      ..|+|||.+.+.. ++.++||||+||++|+|++|..||.+...   ...+..+.....                      
T Consensus       177 ~~Y~aPE~~~~~~-~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~----------------------  233 (483)
T 3sv0_A          177 ARYASVNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV----------------------  233 (483)
T ss_dssp             TTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH----------------------
T ss_pred             ccccCHHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc----------------------
Confidence            9999999998755 89999999999999999999999987543   222322221100                      


Q ss_pred             cchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                        ....+.....++.++.+++.+||..||++||++++|++
T Consensus       234 --~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          234 --ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             --HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             --cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence              00111222457889999999999999999999998654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.91  E-value=5.9e-24  Score=158.46  Aligned_cols=144  Identities=17%  Similarity=0.206  Sum_probs=109.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC-----CcEEEeecCCccccCCC-----ccccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS-----NIVKVADFGLARAFGVP-----VRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-----~~vkl~Dfg~s~~~~~~-----~~~~~~~~~~~~y~aPE   70 (197)
                      ..+++..+..++.|+++||+||         |+|+|     +.++|+|||.+......     ........+++.|+|||
T Consensus       125 ~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE  204 (319)
T 2y4i_B          125 IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE  204 (319)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC----------CCSCBCCSGGGGTSCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccccccccccccccccCCCcccccChH
Confidence            3589999999999999999999         77744     56799999998754321     11223346789999999


Q ss_pred             hhcC--------CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy6390          71 VLLG--------SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS  142 (197)
Q Consensus        71 ~~~~--------~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (197)
                      ++..        ...++.++||||+||++|++++|..||...........+........                     
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------  263 (319)
T 2y4i_B          205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNL---------------------  263 (319)
T ss_dssp             HHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCC---------------------
T ss_pred             HhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCC---------------------
Confidence            9964        23468899999999999999999999998887766666543211110                     


Q ss_pred             hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       143 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                            ....++..+.+++.+||..||++|||++++++
T Consensus       264 ------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          264 ------SQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             ------CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             ------CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                  00236678999999999999999999999885

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.91  E-value=6.6e-24  Score=156.43  Aligned_cols=142  Identities=17%  Similarity=0.203  Sum_probs=110.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc---cccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI---YTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~---~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|+++||+||         |+|      .++.++|+|||.+.........   .....++..|+|||.
T Consensus       112 ~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  191 (291)
T 1xbb_A          112 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC  191 (291)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHH
Confidence            4599999999999999999999         777      4466899999999876543221   122345688999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++|+||+|+++|++++ |..||...........+......                            ...
T Consensus       192 ~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~  242 (291)
T 1xbb_A          192 INYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM----------------------------GCP  242 (291)
T ss_dssp             HHHCE-EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC----------------------------CCC
T ss_pred             hccCC-CChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCC
Confidence            97644 7889999999999999999 99999988877666555432110                            011


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..++..+.+++.+||+.||++||+++++++
T Consensus       243 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          243 AGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            346789999999999999999999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.90  E-value=4.3e-24  Score=160.23  Aligned_cols=143  Identities=17%  Similarity=0.262  Sum_probs=110.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC------CcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..+..++.|+++||+||         |||+|      +.++|+|||++.......  .......+|+.|+|||++
T Consensus       159 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  238 (333)
T 2i1m_A          159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI  238 (333)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHh
Confidence            3589999999999999999999         78854      567999999998653322  122344668899999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|+|++ |..||.+.........+........                           ...
T Consensus       239 ~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~  290 (333)
T 2i1m_A          239 FDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA---------------------------QPA  290 (333)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCC---------------------------CCT
T ss_pred             ccCC-CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCC---------------------------CCC
Confidence            7644 8899999999999999998 9999987765554444433211110                           013


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+..+.+++.+||+.||++|||++++++
T Consensus       291 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          291 FAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            35688999999999999999999999986

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.90  E-value=5.8e-24  Score=171.69  Aligned_cols=142  Identities=17%  Similarity=0.208  Sum_probs=110.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCcc---ccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.||++||+||         |||+      ++.+||+|||+++.......   ......+|..|+|||+
T Consensus       464 ~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~  543 (635)
T 4fl3_A          464 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC  543 (635)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhh
Confidence            4699999999999999999999         7774      45689999999987644322   1223345788999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.... ++.++||||+||++|+|++ |..||.+....+....+.......                            ..
T Consensus       544 ~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~----------------------------~p  594 (635)
T 4fl3_A          544 INYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG----------------------------CP  594 (635)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC----------------------------CC
T ss_pred             hcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CC
Confidence            97644 8999999999999999998 999999988877776665422111                            11


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..++..+.++|.+||..||++||+++++++
T Consensus       595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          595 AGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            346789999999999999999999999874

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.90  E-value=9.5e-24  Score=171.02  Aligned_cols=142  Identities=22%  Similarity=0.246  Sum_probs=111.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||         |||      .++.+||+|||+++....... ......+|+.|+|||++.
T Consensus       486 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~  565 (656)
T 2j0j_A          486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN  565 (656)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhc
Confidence            4689999999999999999999         777      456789999999987654322 122335578999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++|++++ |..||.+....+....+......+                            ....
T Consensus       566 ~~~-~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~----------------------------~~~~  616 (656)
T 2j0j_A          566 FRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP----------------------------MPPN  616 (656)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCC----------------------------CCTT
T ss_pred             CCC-CCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CCcc
Confidence            644 8999999999999999997 999999988887777665422111                            1134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ++..+.+++.+||..||++|||+.++++
T Consensus       617 ~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          617 CPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            6789999999999999999999999875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.90  E-value=9.1e-24  Score=154.69  Aligned_cols=138  Identities=18%  Similarity=0.221  Sum_probs=104.1

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      .+++..+..++.|+++||+||         |+|      +++.++|+|||.+.......   ....++..|+|||.+.+.
T Consensus       113 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~  189 (278)
T 1byg_A          113 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREK  189 (278)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------------CCTTTSCHHHHHHC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccc---cCCCccccccCHHHhCCC
Confidence            389999999999999999999         676      55778999999987654332   233567889999999764


Q ss_pred             CCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      . ++.++|+||+|++++++++ |..||......+....+......                            ......+
T Consensus       190 ~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  240 (278)
T 1byg_A          190 K-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM----------------------------DAPDGCP  240 (278)
T ss_dssp             C-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC----------------------------CCCTTCC
T ss_pred             C-CCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCcccCC
Confidence            4 8899999999999999998 99999887766655554321100                            0113467


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ..+.+++.+||..||++|||++++++
T Consensus       241 ~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          241 PAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            89999999999999999999999874

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.90  E-value=7.8e-25  Score=163.56  Aligned_cols=156  Identities=15%  Similarity=0.111  Sum_probs=107.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC--ccccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~--~~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|+++||+||         |||      +++.+||+|||.++.....  ........||+.|+|||++.
T Consensus       135 ~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  214 (321)
T 2qkw_B          135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFI  214 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhc
Confidence            489999999999999999999         777      4467899999999765432  11223456899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHH---HHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL---FRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.. ++.++||||+||++|++++|+.||......+..   .........   .......     ....       .....
T Consensus       215 ~~~-~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~-------~~~~~  278 (321)
T 2qkw_B          215 KGR-LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN---GQLEQIV-----DPNL-------ADKIR  278 (321)
T ss_dssp             HCB-CCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT---TCCCSSS-----SSSC-------TTCSC
T ss_pred             CCC-CCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc---ccHHHhc-----Chhh-------ccccC
Confidence            655 889999999999999999999999764321111   000000000   0000000     0000       00011


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHK  182 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp  182 (197)
                      +..+..+.+++.+||+.||++|||++++++|-
T Consensus       279 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            22456788999999999999999999999764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.90  E-value=4.4e-24  Score=168.13  Aligned_cols=142  Identities=20%  Similarity=0.277  Sum_probs=111.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||         |||      +++.+||+|||+++....... ......++..|+|||++.
T Consensus       313 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~  392 (495)
T 1opk_A          313 QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA  392 (495)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHh
Confidence            4589999999999999999999         777      446689999999987644322 222344578899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++||||+||++|+|++ |..||.+.+.......+......                            .....
T Consensus       393 ~~~-~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  443 (495)
T 1opk_A          393 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM----------------------------ERPEG  443 (495)
T ss_dssp             HCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC----------------------------CCCTT
T ss_pred             cCC-CCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCC
Confidence            644 8899999999999999999 99999887766555554331111                            11134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ++..+.+||.+||+.||++|||++++++
T Consensus       444 ~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          444 CPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            6789999999999999999999999975

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.90  E-value=7.8e-24  Score=157.34  Aligned_cols=143  Identities=23%  Similarity=0.333  Sum_probs=97.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|+++||+||         |+|      .++.++|+|||.+..............++..|+|||.+.+
T Consensus       131 ~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (310)
T 2wqm_A          131 RLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE  210 (310)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCC
Confidence            4589999999999999999999         666      5577899999999876554333344578999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCC--hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDS--EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .. ++.++|+||+|+++|++++|..||.+..  .......+... ..+.                          .....
T Consensus       211 ~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~--------------------------~~~~~  262 (310)
T 2wqm_A          211 NG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-DYPP--------------------------LPSDH  262 (310)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTT-CSCC--------------------------CCTTT
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcc-cCCC--------------------------Ccccc
Confidence            44 8899999999999999999999997643  22222232211 0000                          00134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+++.+||..||++|||++++++
T Consensus       263 ~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          263 YSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            6789999999999999999999999885

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.90  E-value=1.9e-23  Score=153.65  Aligned_cols=142  Identities=17%  Similarity=0.105  Sum_probs=107.0

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc-----------ccCCC------C-----cEEEeecCCccccCCCccccccceeccce
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC-----------IKPKS------N-----IVKVADFGLARAFGVPVRIYTHEVVTLWY   66 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l-----------lkp~~------~-----~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y   66 (197)
                      ...+++..+..++.|+++||+||           |||+|      +     .+||+|||.++.....   .....+|+.|
T Consensus       116 ~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~g~~~y  192 (287)
T 4f0f_A          116 AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS---VSGLLGNFQW  192 (287)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC---EECCCCCCTT
T ss_pred             cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc---ccccCCCccc
Confidence            34699999999999999999988           66633      2     2899999999755432   2345789999


Q ss_pred             eCchhhcC-CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHH--HHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccch
Q psy6390          67 RAPEVLLG-SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ--LFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN  143 (197)
Q Consensus        67 ~aPE~~~~-~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (197)
                      +|||++.. ...++.++||||+||++|++++|..||........  ...+......+                       
T Consensus       193 ~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----------------------  249 (287)
T 4f0f_A          193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP-----------------------  249 (287)
T ss_dssp             SCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCC-----------------------
T ss_pred             cCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCC-----------------------
Confidence            99999843 23368899999999999999999999987553322  22222211000                       


Q ss_pred             hhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       144 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                          .....++..+.+++.+||+.||++|||++++++
T Consensus       250 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          250 ----TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             ----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                011346789999999999999999999999985

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.90  E-value=8.7e-24  Score=167.84  Aligned_cols=149  Identities=21%  Similarity=0.286  Sum_probs=116.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++.++..++.||++||+||         |||      +++.+||+|||+++....... ......++..|+|||.+.
T Consensus       358 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~  437 (535)
T 2h8h_A          358 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL  437 (535)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhc
Confidence            4599999999999999999999         677      445689999999987654221 122334578899999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      ... ++.++||||+||++|+|++ |..||.+....+....+......+                            ....
T Consensus       438 ~~~-~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~----------------------------~~~~  488 (535)
T 2h8h_A          438 YGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP----------------------------CPPE  488 (535)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCC----------------------------CCTT
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CCCC
Confidence            644 8999999999999999999 999999888877776664421111                            1134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC--cccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH--KYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h--p~~~~~  187 (197)
                      ++..+.+||.+||+.||++|||++++++.  .++...
T Consensus       489 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          489 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence            67899999999999999999999999863  555543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.90  E-value=2e-23  Score=155.18  Aligned_cols=144  Identities=19%  Similarity=0.234  Sum_probs=100.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.|+++||+||         |+|      .++.++|+|||.+....... .......+++.|+|||.+.
T Consensus       129 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  208 (309)
T 2h34_A          129 GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFS  208 (309)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHc
Confidence            4699999999999999999999         666      45778999999987654432 1223456899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++|+||+|+++|++++|..||...........+... ...                         .....+.+
T Consensus       209 ~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~~~  261 (309)
T 2h34_A          209 ESH-ATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQA-IPR-------------------------PSTVRPGI  261 (309)
T ss_dssp             C-----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSC-CCC-------------------------GGGTSTTC
T ss_pred             CCC-CCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccC-CCC-------------------------ccccCCCC
Confidence            644 789999999999999999999999877654333333211 000                         01122457


Q ss_pred             CHhHHHHHHhhcccCCCCCC-CHHHHhc
Q psy6390         154 DQDGLDLLEKTLIYCPATRI-NAENALK  180 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~-s~~ell~  180 (197)
                      +..+.+++.+||+.||++|| +++++++
T Consensus       262 ~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          262 PVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             CTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             CHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            78999999999999999999 7887764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.90  E-value=4.7e-24  Score=159.98  Aligned_cols=142  Identities=17%  Similarity=0.227  Sum_probs=89.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-----------ccC------CCCcEEEeecCCccccCCCccc------------cccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-----------IKP------KSNIVKVADFGLARAFGVPVRI------------YTHE   60 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-----------lkp------~~~~vkl~Dfg~s~~~~~~~~~------------~~~~   60 (197)
                      ..+++..+..++.|+++||+||           |||      +++.+||+|||.++........            ....
T Consensus       131 ~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (337)
T 3ll6_A          131 GPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR  210 (337)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccc
Confidence            4599999999999999999998           666      4567899999999876442211            1134


Q ss_pred             eeccceeCchhhc--CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q psy6390          61 VVTLWYRAPEVLL--GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTF  138 (197)
Q Consensus        61 ~~~~~y~aPE~~~--~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (197)
                      .+|+.|+|||++.  ....++.++||||+||++|++++|..||..............   .                   
T Consensus       211 ~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~-------------------  268 (337)
T 3ll6_A          211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYS---I-------------------  268 (337)
T ss_dssp             -------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------CC---C-------------------
T ss_pred             cCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCccc---C-------------------
Confidence            5799999999984  234478899999999999999999999975443322211100   0                   


Q ss_pred             cccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCc
Q psy6390         139 PEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHK  182 (197)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp  182 (197)
                               ......+..+.+++.+||+.||++|||++|+++|-
T Consensus       269 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          269 ---------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             ---------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             ---------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence                     00133456788999999999999999999999874

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.90  E-value=3.4e-24  Score=160.48  Aligned_cols=148  Identities=18%  Similarity=0.201  Sum_probs=108.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE   70 (197)
                      ...+++..+..++.|++.||+||         |||      +++.++|+|||.+........   ......+|..|+|||
T Consensus       121 ~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  200 (327)
T 3lxl_A          121 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE  200 (327)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHH
Confidence            45699999999999999999999         777      446789999999987654322   222345788899999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHH-----------HHHHhhcCCCCCCCCCCCCCCCCCCCCCc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQL-----------FRIFRVLTTPTEDNWPGVSKLPDYKTTFP  139 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (197)
                      .+.+.. ++.++||||+||+++++++|..||.........           ..+.......                   
T Consensus       201 ~~~~~~-~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  260 (327)
T 3lxl_A          201 SLSDNI-FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG-------------------  260 (327)
T ss_dssp             HHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT-------------------
T ss_pred             HhccCC-CChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc-------------------
Confidence            997644 789999999999999999999998654322110           0000000000                   


Q ss_pred             ccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                           ........++..+.+++.+||+.||++|||+++++++
T Consensus       261 -----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          261 -----QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 0001124578899999999999999999999999654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.90  E-value=4.3e-24  Score=159.74  Aligned_cols=157  Identities=16%  Similarity=0.111  Sum_probs=107.4

Q ss_pred             cCCHHHHHHHHHHHHhhhccc------------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC------------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEV   71 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l------------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~   71 (197)
                      .+++..+..++.|++.||+||            |||      +++.++|+|||.++....... ......||+.|+|||+
T Consensus       127 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~  206 (326)
T 3uim_A          127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY  206 (326)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHH
Confidence            389999999999999999998            566      456889999999987654322 2334458999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCC-----ChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGD-----SEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      +.+.. ++.++||||+||++|++++|..||...     ........+.......   ....... ...           .
T Consensus       207 ~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~-----------~  270 (326)
T 3uim_A          207 LSTGK-SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK---KLEALVD-VDL-----------Q  270 (326)
T ss_dssp             HHHSE-ECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC---CSTTSSC-TTC-----------T
T ss_pred             hccCC-CCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhch---hhhhhcC-hhh-----------c
Confidence            97645 789999999999999999999999621     1111111111110000   0000000 000           0


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcc
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY  183 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~  183 (197)
                      .......+..+.+++.+||+.||++|||++++++|-.
T Consensus       271 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          271 GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            0011223467899999999999999999999998754

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.90  E-value=1.1e-23  Score=154.53  Aligned_cols=141  Identities=22%  Similarity=0.262  Sum_probs=109.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.|++.||.||         |+|      +++.++|+|||.+........ .....+++.|+|||.+.+
T Consensus       117 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~  195 (284)
T 2a19_B          117 EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISS  195 (284)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheecccccc-ccccCCcccccChhhhcc
Confidence            4699999999999999999999         777      446789999999987654332 234468999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++|+||+|++++++++|..|+...  ......+..   .                            ......+
T Consensus       196 ~~-~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~---~----------------------------~~~~~~~  241 (284)
T 2a19_B          196 QD-YGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRD---G----------------------------IISDIFD  241 (284)
T ss_dssp             SC-CCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHT---T----------------------------CCCTTSC
T ss_pred             CC-CcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhc---c----------------------------cccccCC
Confidence            44 889999999999999999998776421  111111111   0                            0013367


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      ..+.+++.+||..||++|||+.++++|.+.-
T Consensus       242 ~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          242 KKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            7899999999999999999999999998753

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.90  E-value=5.1e-24  Score=157.67  Aligned_cols=135  Identities=19%  Similarity=0.340  Sum_probs=97.0

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------C---CCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------K---SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~---~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .+++..+..++.|+++||+||         |||      .   ++.++|+|||.+.....                    
T Consensus       113 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~--------------------  172 (299)
T 3m2w_A          113 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG--------------------  172 (299)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT--------------------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc--------------------
Confidence            599999999999999999999         666      2   67799999999864321                    


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                         ..++.++|+||+||++|+|++|..||...........+..            .......  ..       .......
T Consensus       173 ---~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~------------~~~~~~~--~~-------~~~~~~~  228 (299)
T 3m2w_A          173 ---EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT------------RIRMGQY--EF-------PNPEWSE  228 (299)
T ss_dssp             ---CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCC------------SSCTTCC--SS-------CHHHHTT
T ss_pred             ---ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHH------------HHhhccc--cC-------Cchhccc
Confidence               2267899999999999999999999976543321111000            0000000  00       0111245


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      ++..+.+++.+||+.||++|||++|+++||||++...
T Consensus       229 ~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          229 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence            7899999999999999999999999999999976543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.89  E-value=1e-23  Score=155.91  Aligned_cols=150  Identities=23%  Similarity=0.259  Sum_probs=104.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-----------------ccC------CCCcEEEeecCCccccCCCccc----ccccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-----------------IKP------KSNIVKVADFGLARAFGVPVRI----YTHEVV   62 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-----------------lkp------~~~~vkl~Dfg~s~~~~~~~~~----~~~~~~   62 (197)
                      .++++..+..++.|+++||+||                 |||      .++.+||+|||+++........    .....|
T Consensus       100 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g  179 (301)
T 3q4u_A          100 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG  179 (301)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCC
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccccccccccccc
Confidence            5699999999999999999998                 455      5577899999999765433221    223478


Q ss_pred             ccceeCchhhcCCCC-----CCCchhhhhhhHHHHHHHhC----------CCCCCCCC----hHHHHHHHHhhcCCCCCC
Q psy6390          63 TLWYRAPEVLLGSQR-----YSCPVDVWSIGCIFAEIATR----------KPLFQGDS----EIDQLFRIFRVLTTPTED  123 (197)
Q Consensus        63 ~~~y~aPE~~~~~~~-----~~~~~Diws~g~~l~~ll~~----------~~~~~~~~----~~~~~~~~~~~~~~~~~~  123 (197)
                      |+.|+|||++.+...     ++.++||||+||++|+|++|          ..||....    ...............+  
T Consensus       180 t~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~--  257 (301)
T 3q4u_A          180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRP--  257 (301)
T ss_dssp             CGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCC--
T ss_pred             ccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCC--
Confidence            999999999976432     34689999999999999999          77775432    2222222221111000  


Q ss_pred             CCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                                   ..+   .   .......+..+.+++.+||+.||++|||++++++
T Consensus       258 -------------~~~---~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          258 -------------NIP---N---RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             -------------CCC---G---GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -------------CCC---h---hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                         000   0   0001224467899999999999999999999975

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.89  E-value=2.5e-23  Score=153.94  Aligned_cols=159  Identities=16%  Similarity=0.221  Sum_probs=106.6

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCc
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAP   69 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aP   69 (197)
                      ....+++..+..++.|+++||+||         |||      .++.++|+|||.+........   ......+|..|+||
T Consensus       119 ~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  198 (302)
T 4e5w_A          119 NKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAP  198 (302)
T ss_dssp             HTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCH
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCC
Confidence            345699999999999999999999         777      446789999999987654332   22344678889999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      |.+.+.. ++.++|+||+|++++++++|..|+....  ......   ......... .       ...............
T Consensus       199 E~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~---~~~~~~~~~-~-------~~~~~~~~~~~~~~~  264 (302)
T 4e5w_A          199 ECLMQSK-FYIASDVWSFGVTLHELLTYCDSDSSPM--ALFLKM---IGPTHGQMT-V-------TRLVNTLKEGKRLPC  264 (302)
T ss_dssp             HHHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHH--HHHHHH---HCSCCGGGH-H-------HHHHHHHHTTCCCCC
T ss_pred             eeecCCC-CCcchhHHHHHHHHHHHHHccCCCcchh--hHHhhc---cCCcccccC-H-------HHHHHHHhccCCCCC
Confidence            9997644 7889999999999999999988753221  111110   000000000 0       000000000000011


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...++..+.+++.+||+.||++|||++++++
T Consensus       265 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          265 PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            2457889999999999999999999999875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.89  E-value=1e-22  Score=148.27  Aligned_cols=138  Identities=15%  Similarity=0.163  Sum_probs=107.5

Q ss_pred             cCCHHHHHHHHHHHHhhhccc-----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC-----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l-----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.|+++||+||           |||      +++.++|+|||.+.....     ....+|+.|+|||.+.
T Consensus       107 ~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-----~~~~~t~~y~aPE~~~  181 (271)
T 3kmu_A          107 VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-----PGRMYAPAWVAPEALQ  181 (271)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-----TTCBSCGGGSCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc-----cCccCCccccChhhhc
Confidence            489999999999999999999           666      456678888887654322     2346789999999997


Q ss_pred             CCCC--CCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          74 GSQR--YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~--~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +...  ++.++||||+||++|++++|..||...........+......+                           ....
T Consensus       182 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  234 (271)
T 3kmu_A          182 KKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP---------------------------TIPP  234 (271)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCC---------------------------CCCT
T ss_pred             cCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCC---------------------------CCCC
Confidence            6431  3348999999999999999999999888777766554321111                           0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .++..+.+++.+||+.||++|||++++++
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          235 GISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            46789999999999999999999999984

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.89  E-value=6.2e-23  Score=152.41  Aligned_cols=138  Identities=25%  Similarity=0.304  Sum_probs=98.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc------------ccCC------CC-cEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          11 QVGTYQVKITTRLFLQATSFC------------IKPK------SN-IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l------------lkp~------~~-~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      .+++..+..++.|+++||+||            |||+      ++ .+||+|||.+......   .....+|+.|+|||+
T Consensus        98 ~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~  174 (307)
T 2eva_A           98 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEV  174 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------------CCTTSSCHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---cccCCCCCceEChhh
Confidence            378899999999999999998            5563      33 3799999999765432   223468999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH--HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI--DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      +.+.. ++.++||||+|++++++++|+.||......  .....+...  ..                          ...
T Consensus       175 ~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~--------------------------~~~  225 (307)
T 2eva_A          175 FEGSN-YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG--TR--------------------------PPL  225 (307)
T ss_dssp             HTCCC-CCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT--CC--------------------------CCC
T ss_pred             hCCCC-CCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC--CC--------------------------CCc
Confidence            97644 889999999999999999999999764322  222222110  00                          011


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ...++..+.+++.+||..||++|||++++++
T Consensus       226 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          226 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            1346789999999999999999999999987

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.89  E-value=3e-24  Score=159.30  Aligned_cols=155  Identities=21%  Similarity=0.214  Sum_probs=106.6

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..++.++.|+++||+||         |+|      +++.++|+|||.+........  ......+++.|+|||.+.
T Consensus       129 ~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  208 (307)
T 2nru_A          129 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR  208 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc
Confidence            589999999999999999999         777      556789999999986543221  223346899999999986


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      + . ++.++|+||+|+++|++++|..||...........+.........              .+..+............
T Consensus       209 ~-~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~  272 (307)
T 2nru_A          209 G-E-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEK--------------TIEDYIDKKMNDADSTS  272 (307)
T ss_dssp             T-E-ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSC--------------CHHHHSCSSCSCCCHHH
T ss_pred             C-C-CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhh--------------hhhhhccccccccchHH
Confidence            4 3 688999999999999999999999765432222111111000000              00000000000011223


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +..+.+++.+||+.||++|||+++++++
T Consensus       273 ~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          273 VEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            4678899999999999999999999853

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=9.7e-24  Score=158.37  Aligned_cols=150  Identities=21%  Similarity=0.212  Sum_probs=101.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-----------------ccC------CCCcEEEeecCCccccCCCccc----ccccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-----------------IKP------KSNIVKVADFGLARAFGVPVRI----YTHEVV   62 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-----------------lkp------~~~~vkl~Dfg~s~~~~~~~~~----~~~~~~   62 (197)
                      .++++..+..++.|++.||+||                 |||      .++.+||+|||.++........    .....|
T Consensus       129 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g  208 (337)
T 3mdy_A          129 TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG  208 (337)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCS
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCcc
Confidence            4699999999999999999987                 555      5577899999999766443221    124578


Q ss_pred             ccceeCchhhcCCCCCCC------chhhhhhhHHHHHHHhC----------CCCCCCCC----hHHHHHHHHhhcCCCCC
Q psy6390          63 TLWYRAPEVLLGSQRYSC------PVDVWSIGCIFAEIATR----------KPLFQGDS----EIDQLFRIFRVLTTPTE  122 (197)
Q Consensus        63 ~~~y~aPE~~~~~~~~~~------~~Diws~g~~l~~ll~~----------~~~~~~~~----~~~~~~~~~~~~~~~~~  122 (197)
                      |+.|+|||++.+.. ...      ++||||+||++|+|++|          ..||....    ..............   
T Consensus       209 t~~y~aPE~~~~~~-~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---  284 (337)
T 3mdy_A          209 TKRYMPPEVLDESL-NRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKL---  284 (337)
T ss_dssp             CGGGCCHHHHTTCC-CTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC---
T ss_pred             CcceeChhhccccc-CCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhcc---
Confidence            99999999997644 333      49999999999999999          56664421    11222222111000   


Q ss_pred             CCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         123 DNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                                  ....+..      .....++..+.+++.+||+.||++|||++++++|
T Consensus       285 ------------~~~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          285 ------------RPSFPNR------WSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             ------------CCCCCGG------GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ------------Ccccccc------chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                        0000000      0012345678999999999999999999999875

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.89  E-value=2.4e-23  Score=155.31  Aligned_cols=146  Identities=19%  Similarity=0.268  Sum_probs=106.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|++.||+||         |||      +++.++|+|||.+........   ......+|..|+|||+
T Consensus       129 ~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~  208 (318)
T 3lxp_A          129 HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC  208 (318)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHH
Confidence            4599999999999999999999         777      456789999999987654322   1233456888999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHH-----------HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEID-----------QLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE  140 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (197)
                      +.+.. ++.++||||+||+++++++|..||.......           ....+........                   
T Consensus       209 ~~~~~-~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  268 (318)
T 3lxp_A          209 LKEYK-FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE-------------------  268 (318)
T ss_dssp             HHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC-------------------
T ss_pred             hcCCC-CCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc-------------------
Confidence            97644 7889999999999999999999986532211           0111111100000                   


Q ss_pred             cchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                           .......++..+.+++.+||+.||++|||++++++
T Consensus       269 -----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          269 -----RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                 00112447789999999999999999999999984

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.88  E-value=2.7e-23  Score=156.02  Aligned_cols=160  Identities=19%  Similarity=0.196  Sum_probs=103.1

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc------------------ccC------CCCcEEEeecCCccccCCCc--------ccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC------------------IKP------KSNIVKVADFGLARAFGVPV--------RIY   57 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l------------------lkp------~~~~vkl~Dfg~s~~~~~~~--------~~~   57 (197)
                      ...++..+..++.|+++||+||                  |||      +++.+||+|||+++......        ...
T Consensus       106 ~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~  185 (336)
T 3g2f_A          106 HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA  185 (336)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------
T ss_pred             cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCcccccccc
Confidence            4578999999999999999988                  455      45778999999998664321        112


Q ss_pred             ccceeccceeCchhhcCC------CCCCCchhhhhhhHHHHHHHhCCCCCCCCCh-----------------HHHHHHHH
Q psy6390          58 THEVVTLWYRAPEVLLGS------QRYSCPVDVWSIGCIFAEIATRKPLFQGDSE-----------------IDQLFRIF  114 (197)
Q Consensus        58 ~~~~~~~~y~aPE~~~~~------~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~-----------------~~~~~~~~  114 (197)
                      ....||+.|+|||++.+.      ..++.++||||+||++|+|++|..|+.....                 ........
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (336)
T 3g2f_A          186 ISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLV  265 (336)
T ss_dssp             CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHH
T ss_pred             ccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhh
Confidence            234689999999999752      2255789999999999999998665532211                 00111110


Q ss_pred             hhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHH------hcCcccCCCC
Q psy6390         115 RVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA------LKHKYFADKT  188 (197)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~el------l~hp~~~~~~  188 (197)
                      ....               ....++...     ......+..+.++|.+||..||++|||++|+      +-++|-++..
T Consensus       266 ~~~~---------------~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~  325 (336)
T 3g2f_A          266 SREK---------------QRPKFPEAW-----KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKS  325 (336)
T ss_dssp             TTSC---------------CCCCCCTTC-----CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC---
T ss_pred             cccc---------------cCCCCCccc-----ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhccc
Confidence            0000               000000000     0001134579999999999999999999999      4478877654


Q ss_pred             C
Q psy6390         189 D  189 (197)
Q Consensus       189 ~  189 (197)
                      .
T Consensus       326 ~  326 (336)
T 3g2f_A          326 V  326 (336)
T ss_dssp             -
T ss_pred             C
Confidence            3

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.88  E-value=1.6e-24  Score=166.35  Aligned_cols=160  Identities=21%  Similarity=0.272  Sum_probs=108.6

Q ss_pred             CCHHHHHHHHHHHHhhhccc---------ccCCCC----------cEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          12 VGTYQVKITTRLFLQATSFC---------IKPKSN----------IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        12 l~~~~~~~~~~qi~~~l~~l---------lkp~~~----------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      +++..++.++.|+++||+||         |||+|.          .+||+|||.++....... .....||+.|+|||++
T Consensus       109 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~  187 (396)
T 4eut_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ-FVSLYGTEEYLHPDMY  187 (396)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGG-SSCSSSCCTTCCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCc-cccccCCccccCHHHh
Confidence            99999999999999999999         777553          379999999987655432 3345789999999998


Q ss_pred             cCC-------CCCCCchhhhhhhHHHHHHHhCCCCCCCC----ChHHHHHHHHhhcCCCCCCCCCCCCCCCC----CCCC
Q psy6390          73 LGS-------QRYSCPVDVWSIGCIFAEIATRKPLFQGD----SEIDQLFRIFRVLTTPTEDNWPGVSKLPD----YKTT  137 (197)
Q Consensus        73 ~~~-------~~~~~~~Diws~g~~l~~ll~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  137 (197)
                      .+.       ..++.++||||+||++|++++|..||...    ...+....+..   ..+...+........    +...
T Consensus       188 ~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~  264 (396)
T 4eut_A          188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT---GKPSGAISGVQKAENGPIDWSGD  264 (396)
T ss_dssp             HHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH---SCCTTCCEEEECSTTCCEEEESS
T ss_pred             hccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc---CCCcccchhheeccCCCcccCcc
Confidence            641       23678999999999999999999999643    23344444433   222222111111110    0001


Q ss_pred             CcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         138 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+...     ......+..+.+++.+||..||++||+++++++
T Consensus       265 ~~~~~-----~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          265 MPVSC-----SLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             CCTTC-----SSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             CCccc-----ccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence            11000     011224467889999999999999999999754

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.88  E-value=2.6e-23  Score=154.87  Aligned_cols=144  Identities=17%  Similarity=0.188  Sum_probs=104.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc---------cccceeccc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI---------YTHEVVTLW   65 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~---------~~~~~~~~~   65 (197)
                      ..+++..+..++.|+++||+||         |||      .++.++|+|||.+.........         .....+|+.
T Consensus       129 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  208 (317)
T 2buj_A          129 NFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS  208 (317)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcc
Confidence            4599999999999999999999         677      5577899999998765321110         122356899


Q ss_pred             eeCchhhcCCC--CCCCchhhhhhhHHHHHHHhCCCCCCCCCh--HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCccc
Q psy6390          66 YRAPEVLLGSQ--RYSCPVDVWSIGCIFAEIATRKPLFQGDSE--IDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW  141 (197)
Q Consensus        66 y~aPE~~~~~~--~~~~~~Diws~g~~l~~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (197)
                      |+|||++....  .++.++||||+||++|++++|..||.....  ......+......                      
T Consensus       209 y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------  266 (317)
T 2buj_A          209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI----------------------  266 (317)
T ss_dssp             GCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--C----------------------
T ss_pred             cCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCC----------------------
Confidence            99999986532  267899999999999999999999853110  0011111110000                      


Q ss_pred             chhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                            ......+..+.++|.+||+.||.+|||+++++++
T Consensus       267 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          267 ------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence                  0013467899999999999999999999999976

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.88  E-value=1.1e-22  Score=152.32  Aligned_cols=146  Identities=17%  Similarity=0.232  Sum_probs=105.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc---cccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI---YTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~---~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.|+++||+||         |||      +++.++|+|||.+.........   .....++..|+|||.
T Consensus       140 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  219 (326)
T 2w1i_A          140 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES  219 (326)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchh
Confidence            4599999999999999999999         777      4467899999999876543221   223356778999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChH------------HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEI------------DQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFP  139 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (197)
                      +.+.. ++.++||||+|++++++++|..|+......            .....+........                  
T Consensus       220 ~~~~~-~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------  280 (326)
T 2w1i_A          220 LTESK-FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG------------------  280 (326)
T ss_dssp             HHHCE-EEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC------------------
T ss_pred             hcCCC-CCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCC------------------
Confidence            97644 788999999999999999999887543111            00001111000000                  


Q ss_pred             ccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         140 EWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                            .......++..+.+++.+||..||++|||++++++
T Consensus       281 ------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          281 ------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             ------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                  00112457789999999999999999999999874

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.87  E-value=1.4e-21  Score=146.89  Aligned_cols=151  Identities=20%  Similarity=0.183  Sum_probs=104.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-----------------ccC------CCCcEEEeecCCccccCCCcc----cccccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-----------------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVV   62 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-----------------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~   62 (197)
                      .++++..+..++.|++.||+||                 |||      +++.+||+|||.+........    ......+
T Consensus       134 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~g  213 (342)
T 1b6c_B          134 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG  213 (342)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCC
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCc
Confidence            4699999999999999999987                 455      556789999999976544322    1234578


Q ss_pred             ccceeCchhhcCCCC-----CCCchhhhhhhHHHHHHHhC----------CCCCCCCC----hHHHHHHHHhhcCCCCCC
Q psy6390          63 TLWYRAPEVLLGSQR-----YSCPVDVWSIGCIFAEIATR----------KPLFQGDS----EIDQLFRIFRVLTTPTED  123 (197)
Q Consensus        63 ~~~y~aPE~~~~~~~-----~~~~~Diws~g~~l~~ll~~----------~~~~~~~~----~~~~~~~~~~~~~~~~~~  123 (197)
                      |+.|+|||++.+...     ++.++||||+||++|+|++|          ..||....    ..............    
T Consensus       214 t~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----  289 (342)
T 1b6c_B          214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL----  289 (342)
T ss_dssp             CGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC----
T ss_pred             CcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHh----
Confidence            999999999976432     22689999999999999998          67776542    12222222110000    


Q ss_pred             CCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                                 ....+..   .   .....+..+.+|+.+||+.||++|||++++++|
T Consensus       290 -----------~~~~~~~---~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          290 -----------RPNIPNR---W---QSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             -----------CCCCCGG---G---GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             -----------CCCCccc---c---cchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                       0000000   0   001234578899999999999999999999875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.85  E-value=3.5e-22  Score=151.68  Aligned_cols=139  Identities=12%  Similarity=0.037  Sum_probs=102.6

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------C-----------CCcEEEeecCCccccC--CCccccccc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------K-----------SNIVKVADFGLARAFG--VPVRIYTHE   60 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~-----------~~~vkl~Dfg~s~~~~--~~~~~~~~~   60 (197)
                      ...+++..++.++.||+.||+||         |||      .           ++.+||+|||+|+...  .........
T Consensus       166 ~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  245 (365)
T 3e7e_A          166 EKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK  245 (365)
T ss_dssp             TCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCS
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeee
Confidence            34699999999999999999999         677      3           5789999999997543  222334456


Q ss_pred             eeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcc
Q psy6390          61 VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE  140 (197)
Q Consensus        61 ~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (197)
                      .||+.|+|||++.+.. ++.++||||+||++|+|++|+.||.......                +..    ......   
T Consensus       246 ~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~----------------~~~----~~~~~~---  301 (365)
T 3e7e_A          246 CETSGFQCVEMLSNKP-WNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----------------CKP----EGLFRR---  301 (365)
T ss_dssp             SCTTSCCCHHHHTTCC-BSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----------------EEE----CSCCTT---
T ss_pred             cCCCCCCChHHhcCCC-CCccccHHHHHHHHHHHHhCCCccccCCCCc----------------eee----chhccc---
Confidence            7899999999998755 8999999999999999999999986432200                000    000000   


Q ss_pred             cchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                                ...+....+++.+||+.+|.+|++..+.+.+
T Consensus       302 ----------~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~  332 (365)
T 3e7e_A          302 ----------LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ  332 (365)
T ss_dssp             ----------CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred             ----------cCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence                      0134577899999999999999765544443

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.85  E-value=2.4e-22  Score=150.95  Aligned_cols=142  Identities=11%  Similarity=0.087  Sum_probs=101.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc----------ccCC------CC--------------------cEEEeecCCccccCCC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC----------IKPK------SN--------------------IVKVADFGLARAFGVP   53 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l----------lkp~------~~--------------------~vkl~Dfg~s~~~~~~   53 (197)
                      +.+++..++.++.||+.||+||          |||+      ++                    .+||+|||+|+.....
T Consensus       156 ~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~  235 (336)
T 2vuw_A          156 KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG  235 (336)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC
Confidence            5689999999999999999999          7772      23                    8999999999866432


Q ss_pred             ccccccceeccceeCchhhcCCCCCCCchhhhhhhHH-HHHHHhCCCCCCCCChHH-HHHHHHhhcCCCCCCCCCCCCCC
Q psy6390          54 VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI-FAEIATRKPLFQGDSEID-QLFRIFRVLTTPTEDNWPGVSKL  131 (197)
Q Consensus        54 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~-l~~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  131 (197)
                           ..+||+.|+|||++.+..  +.++||||++++ .++++.|..||....... ....+.........         
T Consensus       236 -----~~~gt~~y~aPE~~~g~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------  299 (336)
T 2vuw_A          236 -----IVVFCDVSMDEDLFTGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTK---------  299 (336)
T ss_dssp             -----EEECCCCTTCSGGGCCCS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSC---------
T ss_pred             -----cEEEeecccChhhhcCCC--ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcc---------
Confidence                 347899999999998643  789999998777 666777888874322111 11222211111000         


Q ss_pred             CCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHh-cCcccC
Q psy6390         132 PDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL-KHKYFA  185 (197)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell-~hp~~~  185 (197)
                            .       .....+.++.++.+||.+||+.|     |++|++ +||||+
T Consensus       300 ------~-------~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          300 ------C-------NTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             ------C-------CSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ------c-------chhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence                  0       00111336788999999999987     999999 999995

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.83  E-value=2.8e-22  Score=163.39  Aligned_cols=135  Identities=19%  Similarity=0.231  Sum_probs=104.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC-----CcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS-----NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-----~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      ..+++.+++.++.||++||.||         |||+|     ..+||+|||+++.....    ....||+.|+|||++.+.
T Consensus       177 ~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~----~~~~gt~~y~aPE~~~~~  252 (681)
T 2pzi_A          177 QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSF----GYLYGTPGFQAPEIVRTG  252 (681)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCC----SCCCCCTTTSCTTHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccC----CccCCCccccCHHHHcCC
Confidence            4699999999999999999999         77733     47899999999876543    345789999999998753


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCH
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQ  155 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (197)
                        .+.++||||+||++++|++|..|+.+....                   .   .+.       ...      ....+.
T Consensus       253 --~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-------------------~---~~~-------~~~------~~~~~~  295 (681)
T 2pzi_A          253 --PTVATDIYTVGRTLAALTLDLPTRNGRYVD-------------------G---LPE-------DDP------VLKTYD  295 (681)
T ss_dssp             --SCHHHHHHHHHHHHHHHHSCCCEETTEECS-------------------S---CCT-------TCH------HHHHCH
T ss_pred             --CCCceehhhhHHHHHHHHhCCCCCcccccc-------------------c---ccc-------ccc------ccccCH
Confidence              478999999999999999998887642100                   0   000       000      011356


Q ss_pred             hHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         156 DGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       156 ~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      .+.++|.+||+.||++||++.+++.|+|+.
T Consensus       296 ~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          296 SYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            789999999999999999999888888864

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.66  E-value=5.9e-17  Score=119.07  Aligned_cols=126  Identities=10%  Similarity=-0.051  Sum_probs=83.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCCCcEEEeecCCccccCCCccccccceeccceeCchhhcCCCCCCC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSC   80 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~   80 (197)
                      +.....++..++.|+++||+||         |||+|..  +.+-|..+            +++..|++|        ++.
T Consensus       124 ~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIl--l~~~g~~k------------l~~~~~~~~--------~~~  181 (286)
T 3uqc_A          124 TSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVR--VSIDGDVV------------LAYPATMPD--------ANP  181 (286)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEE--EETTSCEE------------ECSCCCCTT--------CCH
T ss_pred             cCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEE--EcCCCCEE------------EEeccccCC--------CCc
Confidence            3456778999999999999999         8885532  22323221            112233332        789


Q ss_pred             chhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHH
Q psy6390          81 PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDL  160 (197)
Q Consensus        81 ~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  160 (197)
                      ++||||+||++|+|++|+.||.+.+........               .  ......     ..........++..+.++
T Consensus       182 ~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---------------~--~~~~~~-----~~~~~~~~~~~~~~l~~l  239 (286)
T 3uqc_A          182 QDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---------------E--RDTAGQ-----PIEPADIDRDIPFQISAV  239 (286)
T ss_dssp             HHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---------------C--BCTTSC-----BCCHHHHCTTSCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---------------H--HHhccC-----CCChhhcccCCCHHHHHH
Confidence            999999999999999999999865432100000               0  000000     001122335688999999


Q ss_pred             HHhhcccCCCCCCCHHHHhc
Q psy6390         161 LEKTLIYCPATRINAENALK  180 (197)
Q Consensus       161 i~~~l~~~p~~R~s~~ell~  180 (197)
                      |.+||+.||++| |++|+++
T Consensus       240 i~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          240 AARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHHCTTSSCC-CHHHHHH
T ss_pred             HHHHcccCCccC-CHHHHHH
Confidence            999999999999 9999885

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.29  E-value=1.8e-13  Score=109.33  Aligned_cols=82  Identities=13%  Similarity=0.059  Sum_probs=50.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      .++++.   .|+.||++||+|+         |||      +++.+||+|||+|+............+||+.|||||++.+
T Consensus       337 ~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g  413 (569)
T 4azs_A          337 EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE  413 (569)
T ss_dssp             CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC--
T ss_pred             CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC
Confidence            356654   5899999999999         888      5577899999999887665555566789999999999975


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT   96 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~   96 (197)
                      .  ....+|+||+|++.+.+..
T Consensus       414 ~--~~~~~d~~s~g~~~~~l~~  433 (569)
T 4azs_A          414 N--KSWNGFWRSAPVHPFNLPQ  433 (569)
T ss_dssp             -----------------CCCCT
T ss_pred             C--CCCcccccccccchhhhcc
Confidence            3  4677999999998776544

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.73  E-value=1.2e-09  Score=86.94  Aligned_cols=85  Identities=13%  Similarity=0.077  Sum_probs=65.6

Q ss_pred             HHHHHHHHHhhhccc---------ccCCCC----cEEEeecCCccccCCCccc-------cccceeccceeCchhhcCC-
Q psy6390          17 VKITTRLFLQATSFC---------IKPKSN----IVKVADFGLARAFGVPVRI-------YTHEVVTLWYRAPEVLLGS-   75 (197)
Q Consensus        17 ~~~~~~qi~~~l~~l---------lkp~~~----~vkl~Dfg~s~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~-   75 (197)
                      +..++.|+++||+||         |||+|.    .+||+|||+++........       .....||+.|||||++... 
T Consensus       433 ~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~  512 (540)
T 3en9_A          433 NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFL  512 (540)
T ss_dssp             CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECCeEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHH
Confidence            568999999999999         888664    6899999999987653221       2345789999999999651 


Q ss_pred             CCCCCchhhhhhhHHHHHHHhCCCCC
Q psy6390          76 QRYSCPVDVWSIGCIFAEIATRKPLF  101 (197)
Q Consensus        76 ~~~~~~~Diws~g~~l~~ll~~~~~~  101 (197)
                      ..|+..+|+|+..+-..+...++.+|
T Consensus       513 ~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          513 EGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            22677889999888777777666555

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.61  E-value=0.00031  Score=48.82  Aligned_cols=93  Identities=9%  Similarity=-0.038  Sum_probs=48.9

Q ss_pred             hhhHHHhhhcCCHHHHHHHHHHHHhhhcccccCCCCcEEEeecCCccccCCCc-ccc--ccceeccceeCchhhcCCCCC
Q psy6390           2 CNLIQLEWEQVGTYQVKITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPV-RIY--THEVVTLWYRAPEVLLGSQRY   78 (197)
Q Consensus         2 ~~~~~~~~~~l~~~~~~~~~~qi~~~l~~llkp~~~~vkl~Dfg~s~~~~~~~-~~~--~~~~~~~~y~aPE~~~~~~~~   78 (197)
                      .++++....+++|.+++.++.|.+.+|.-+....+....|.+-.......+.. ...  ........+.|||...  ...
T Consensus        36 ~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~~~s~~~~~~~~~pe~~~--~~~  113 (229)
T 2yle_A           36 EEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVAGKLGY--SQC  113 (229)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECCC------------CCSS--SSS
T ss_pred             HHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecccccccccccCCCChhhcc--ccc
Confidence            36788888999999999999999998766532111111111110000000000 000  0001233566787763  224


Q ss_pred             CCchhhhhhhHHHHHHHh
Q psy6390          79 SCPVDVWSIGCIFAEIAT   96 (197)
Q Consensus        79 ~~~~Diws~g~~l~~ll~   96 (197)
                      +.+.-|+|+|+++|.-+-
T Consensus       114 te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A          114 METEVIESLGIIIYKALD  131 (229)
T ss_dssp             CHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHhh
Confidence            678889999999999876

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=97.18  E-value=5.4e-05  Score=55.15  Aligned_cols=48  Identities=10%  Similarity=-0.022  Sum_probs=36.7

Q ss_pred             CHHHHHHHHHHHHhhhccc---------ccCCC-----CcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          13 GTYQVKITTRLFLQATSFC---------IKPKS-----NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        13 ~~~~~~~~~~qi~~~l~~l---------lkp~~-----~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+...++.|+++||+||         |||+|     +.++|+|||+|+..             ..++|||.+.
T Consensus       191 ~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~~~~vkl~DFG~a~~~-------------~~~~a~e~l~  252 (282)
T 1zar_A          191 RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEGIWIIDFPQSVEV-------------GEEGWREILE  252 (282)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTEEEECCCTTCEET-------------TSTTHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEECCcEEEEECCCCeEC-------------CCCCHHHHHH
Confidence            3345678999999999999         77754     57899999998633             3457788763

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=95.28  E-value=0.0086  Score=42.77  Aligned_cols=38  Identities=13%  Similarity=0.030  Sum_probs=31.4

Q ss_pred             CHHHHHHHHHHHHhhhccc----------ccCCCC----cEEEeecCCcccc
Q psy6390          13 GTYQVKITTRLFLQATSFC----------IKPKSN----IVKVADFGLARAF   50 (197)
Q Consensus        13 ~~~~~~~~~~qi~~~l~~l----------lkp~~~----~vkl~Dfg~s~~~   50 (197)
                      ++..+..++.|++.||.||          |||.|.    .++|+|||+|...
T Consensus       168 ~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~~~~liDFG~a~~~  219 (258)
T 1zth_A          168 KELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYIDKVYFIDMGQAVTL  219 (258)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESSSEEECCCTTCEET
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcCcEEEEECcccccC
Confidence            4567889999999999998          788554    5799999999754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	197
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-46
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-43
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-43
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-39
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-36
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-36
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-34
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-33
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	9e-32
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-31
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-31
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-29
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-26
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-26
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-26
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-26
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-26
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	9e-26
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-25
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-24
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-24
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-24
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-23
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-23
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-22
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-22
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-22
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-21
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-20
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-20
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-19
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-18
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-16
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-16
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-16
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-15
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-15
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-15
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-15
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-14
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-13
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-12
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-12
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-12
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-12
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-11
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-11
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-11
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-10
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-10
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	9e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-08
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-08
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-06

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (384), Expect = 2e-46
 Identities = 96/156 (61%), Positives = 114/156 (73%)

Query: 34  PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
                +K+ADFGLARAFGVPVR YTHEVVTLWYRAPE+LLG + YS  VD+WS+GCIFAE
Sbjct: 136 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
           + TR+ LF GDSEIDQLFRIFR L TP E  WPGV+ +PDYK +FP+W+     K V  L
Sbjct: 196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPL 255

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
           D+DG  LL + L Y P  RI+A+ AL H +F D T 
Sbjct: 256 DEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (365), Expect = 2e-43
 Identities = 75/164 (45%), Positives = 103/164 (62%), Gaps = 7/164 (4%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           ++ ++K+ADFGLA++FG P R YTH+VVT WYRAPE+L G++ Y   VD+W++GCI AE+
Sbjct: 135 ENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 194

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
             R P   GDS++DQL RIF  L TPTE+ WP +  LPDY  TF  +    L        
Sbjct: 195 LLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV-TFKSFPGIPLHHIFSAAG 253

Query: 155 QDGLDLLEKTLIYCPATRINAENALKHKYFADK------TDLPK 192
            D LDL++   ++ P  RI A  ALK KYF+++        LP+
Sbjct: 254 DDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPR 297

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  143 bits (362), Expect = 4e-43
 Identities = 83/157 (52%), Positives = 108/157 (68%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
             +  +   +K+ADFGLARAFG+PVR YTHE+VTLWYRAP+VL+GS++YS  +D+WS+GC
Sbjct: 130 NLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGC 189

Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
           IFAE+    PLF G SE DQL RIFR+L TP   NWP V++LP Y   F  +     +  
Sbjct: 190 IFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESF 249

Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
           +K LD+ G+DLL K L   P  RI A+ AL+H YF +
Sbjct: 250 LKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 3e-39
 Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 7/165 (4%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
           +KP      ++  +K+A+FGLARAFG+PVR Y+ EVVTLWYR P+VL G++ YS  +D+W
Sbjct: 127 LKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186

Query: 86  SIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           S GCIFAE+A    PLF G+   DQL RIFR+L TPTE+ WP ++KLPDYK      +  
Sbjct: 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT 246

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
            L   V  L+  G DLL+  L   P  RI+AE AL+H YF+D   
Sbjct: 247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 2e-36
 Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 7/157 (4%)

Query: 35  KSNIVKVADFGLARAFGVP----VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
           +  ++K+ADFGLARAF +        YT+ VVTLWYR PE+LLG + Y  P+D+W  GCI
Sbjct: 152 RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI 211

Query: 91  FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY-KTTFPEWSNFCLDKH 149
            AE+ TR P+ QG++E  QL  I ++  + T + WP V     Y K    +     +   
Sbjct: 212 MAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDR 271

Query: 150 VKN--LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
           +K    D   LDL++K L+  PA RI++++AL H +F
Sbjct: 272 LKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 308

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (318), Expect = 4e-36
 Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 3/163 (1%)

Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           ++  +  + P + ++K+ DFG A+         ++ + + +YRAPE++ G+  Y+  +DV
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 206

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS GC+ AE+   +P+F GDS +DQL  I +VL TPT +    ++     +  FP+    
Sbjct: 207 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP-NYTEFKFPQIKAH 265

Query: 145 CLDK-HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
              K        + + L  + L Y P  R+    A  H +F +
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (302), Expect = 5e-34
 Identities = 78/162 (48%), Positives = 101/162 (62%), Gaps = 12/162 (7%)

Query: 32  IKPKSNIV-------KVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP  NI+       K+ADFGLAR +       T  VVTLWYRAPEVLL    Y+ PVD+
Sbjct: 142 LKP-QNILVTSSGQIKLADFGLARIYS-FQMALTSVVVTLWYRAPEVLLQ-SSYATPVDL 198

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+GCIFAE+  RKPLF+G S++DQL +I  V+  P E++WP    LP     F   S  
Sbjct: 199 WSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA--FHSKSAQ 256

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
            ++K V ++D+ G DLL K L + PA RI+A +AL H YF D
Sbjct: 257 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (298), Expect = 3e-33
 Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 5/160 (3%)

Query: 35  KSNIVKVADFGLARAFGVP---VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
            +  +K+ DFGLAR            T  V T WYRAPE++L S+ Y+  +D+WS+GCI 
Sbjct: 144 TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 203

Query: 92  AEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKH 149
           AE+ + +P+F G   +DQL  I  +L +P++++   +  L   +Y  + P  +    ++ 
Sbjct: 204 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 263

Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
             N D   LDLL+K L + P  RI  E AL H Y     D
Sbjct: 264 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (289), Expect = 9e-32
 Identities = 58/163 (35%), Positives = 78/163 (47%), Gaps = 5/163 (3%)

Query: 29  SFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
           S     +   +K+ DFGLAR         T  V T WYRAPE++L    Y+  VD+WS+G
Sbjct: 150 SNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 206

Query: 89  CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCL 146
           CI AE+ T + LF G   IDQL  I R++ TP  +    +S     +Y  +  +      
Sbjct: 207 CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNF 266

Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                  +   +DLLEK L+     RI A  AL H YFA   D
Sbjct: 267 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  112 bits (281), Expect = 7e-31
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
             I  +   +++ D+GLA  +  P + Y   V + +++ PE+L+  Q Y   +D+WS+GC
Sbjct: 160 VMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 218

Query: 90  IFAEIATRK-PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDY--------KTTFPE 140
           + A +  RK P F G    DQL RI +VL T    ++     +           + +   
Sbjct: 219 MLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR 278

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
           W  F   ++   +  + LD L+K L Y   +R+ A  A++H YF  
Sbjct: 279 WERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (282), Expect = 9e-31
 Identities = 62/173 (35%), Positives = 84/173 (48%), Gaps = 8/173 (4%)

Query: 29  SFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
                 +   +K+ DFGLAR         T  VVT WYRAPEV+L   RY+  VD+WS+G
Sbjct: 150 GNLAVNEDCELKILDFGLARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 206

Query: 89  CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVS--KLPDYKTTFPEWSNFCL 146
           CI AE+ T K LF+G   +DQL  I +V  TP  +    +   +  +Y    PE      
Sbjct: 207 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF 266

Query: 147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA---DKTDLPKFAEY 196
              + N     ++LLEK L+     R+ A  AL H YF    D  D P+  +Y
Sbjct: 267 ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKY 319

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (272), Expect = 2e-29
 Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 30/188 (15%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP SNI       +K+ DFG++        +    V T  Y +PE L G   YS   D+
Sbjct: 131 VKP-SNILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQG-THYSVQSDI 186

Query: 85  WSIGCIFAEIATRKPLFQG-DSEIDQLFRIFRVL----TTPTEDNWPGVSKLPDYKTTFP 139
           WS+G    E+A  +      D++  +L    +V      TP     PG         + P
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRP 246

Query: 140 EWSNFCLDKHVKN----------LDQDGLDLLEKTLIYCPATRINAENALKHKYF----A 185
             + F L  ++ N             +  D + K LI  PA R + +  + H +     A
Sbjct: 247 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 306

Query: 186 DKTDLPKF 193
           ++ D   +
Sbjct: 307 EEVDFAGW 314

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  100 bits (251), Expect = 3e-26
 Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 27/160 (16%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
                +SN +K+ DFGL      P +       T  + APEV  G +      D+WS+G 
Sbjct: 156 MFTTKRSNELKLIDFGLTAHLD-PKQSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGV 213

Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
           +   + +    F G+++ + L  +        +  + G+S                    
Sbjct: 214 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS-------------------- 253

Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                +DG D + K L+  P TR+    AL+H +      
Sbjct: 254 -----EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 288

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  100 bits (249), Expect = 3e-26
 Identities = 37/159 (23%), Positives = 58/159 (36%), Gaps = 27/159 (16%)

Query: 34  PKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
            + + + ++DFGL++    P  + +    T  Y APEVL   + YS  VD WSIG I   
Sbjct: 144 DEDSKIMISDFGLSKMED-PGSVLSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVIAYI 201

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
           +    P F  +++     +I +         W  +S                        
Sbjct: 202 LLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD----------------------- 238

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                D +   +   P  R   E AL+H + A  T L K
Sbjct: 239 --SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDK 275

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  100 bits (250), Expect = 4e-26
 Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 27/155 (17%)

Query: 30  FCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
            C   K++ VK+ DFGLA     P  I      T  + APE++   +      D+W+IG 
Sbjct: 159 MCETKKASSVKIIDFGLATKLN-PDEIVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGV 216

Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
           +   + +    F G+ +++ L  + R      ED +  VS                    
Sbjct: 217 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVS-------------------- 256

Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 +  D ++  L   P  R+   +AL+H + 
Sbjct: 257 -----PEAKDFIKNLLQKEPRKRLTVHDALEHPWL 286

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.9 bits (246), Expect = 5e-26
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 36/169 (21%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
           IKP      + + +K++DFGLA  F      R+      TL Y APE+L   + ++ PVD
Sbjct: 129 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 188

Query: 84  VWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
           VWS G +   +   +  +   S+  Q +  ++                 + KT    W  
Sbjct: 189 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-----------------EKKTYLNPW-- 229

Query: 144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
                  K +D   L LL K L+  P+ RI   +  K +++     L K
Sbjct: 230 -------KKIDSAPLALLHKILVENPSARITIPDIKKDRWY--NKPLKK 269

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 5e-26
 Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 15/172 (8%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
            +      +K+ DFGLAR  G      T  VVT +YRAPEV+LG   Y   VD+WS+GCI
Sbjct: 150 IVVKSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 207

Query: 91  FAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGV-SKLPDYKTTFPEWSNFCLDK- 148
             E+   K LF G   IDQ  ++   L TP  +    +   + +Y    P+++     K 
Sbjct: 208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 267

Query: 149 -----------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                      H K       DLL K L+  PA RI+ ++AL+H Y     D
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 319

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.0 bits (246), Expect = 9e-26
 Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 27/172 (15%)

Query: 18  KITTRLFLQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQR 77
            I               +S+ +K+ +FG AR                 Y APEV      
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT-APEYYAPEVHQH-DV 179

Query: 78  YSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTT 137
            S   D+WS+G +   + +    F  ++    +  I     T  E+ +  +S        
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS-------- 231

Query: 138 FPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
                             + +D +++ L+    +R+ A  AL+H +   K +
Sbjct: 232 -----------------IEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE 266

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.8 bits (238), Expect = 5e-25
 Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 40/160 (25%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           IKP  N+       +K+ADFG +     P    T    TL Y  PE++ G + +   VD+
Sbjct: 132 IKP-ENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 187

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+G +  E    KP F+ ++  +   RI RV                  + TFP++   
Sbjct: 188 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------------EFTFPDF--- 226

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                   + +   DL+ + L + P+ R      L+H + 
Sbjct: 227 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 258

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.8 bits (238), Expect = 1e-24
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 27/153 (17%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           VK+ DFG            +  V T ++ APEV+   + Y   VD+WS+G +  E+   +
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGE 213

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
           P +  ++ +  L+ I     TP   N   +S                             
Sbjct: 214 PPYLNENPLRALYLIAT-NGTPELQNPEKLSA-------------------------IFR 247

Query: 159 DLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
           D L + L      R +A+  L+H++      L 
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 94.4 bits (234), Expect = 2e-24
 Identities = 35/155 (22%), Positives = 48/155 (30%), Gaps = 31/155 (20%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS-----QRYSCPVDVWSIGC 89
               +K+ DFG +     P         T  Y APE++  S       Y   VD+WS G 
Sbjct: 145 DDMNIKLTDFGFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 203

Query: 90  IFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
           I   +    P F    ++  L  I           W   S                    
Sbjct: 204 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD------------------- 244

Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                    DL+ + L+  P  R  AE AL H +F
Sbjct: 245 ------TVKDLVSRFLVVQPQKRYTAEEALAHPFF 273

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.9 bits (233), Expect = 5e-24
 Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 38/171 (22%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG----SQRYSC 80
           +K   NI       +K+ADFG++      ++     + T ++ APEV++      + Y  
Sbjct: 136 LKA-GNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 194

Query: 81  PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 140
             DVWS+G    E+A  +P     + +  L +I +    PT       S           
Sbjct: 195 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS-EPPTLAQPSRWSS---------- 243

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP 191
                          +  D L+K L      R      L+H +    ++ P
Sbjct: 244 ---------------NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 279

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.0 bits (228), Expect = 2e-23
 Identities = 31/159 (19%), Positives = 55/159 (34%), Gaps = 37/159 (23%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP +N+       VK+ DFGLAR            V T +Y +PE +     Y+   D+
Sbjct: 140 LKP-ANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNR-MSYNEKSDI 197

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+GC+  E+    P F   S+ +   +I           +                   
Sbjct: 198 WSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS------------------ 239

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKY 183
                      +  +++ + L      R + E  L++  
Sbjct: 240 ----------DELNEIITRMLNLKDYHRPSVEEILENPL 268

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.7 bits (227), Expect = 3e-23
 Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 27/149 (18%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+ DFGLA         + +   T  + APE++   +      D+WSIG I   + +  
Sbjct: 156 IKIIDFGLAHKID-FGNEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGA 213

Query: 99  PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGL 158
             F GD++ + L  +  V     ++ +   S                             
Sbjct: 214 SPFLGDTKQETLANVSAVNYEFEDEYFSNTS-------------------------ALAK 248

Query: 159 DLLEKTLIYCPATRINAENALKHKYFADK 187
           D + + L+  P  R+  +++L+H +   K
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 91.2 bits (225), Expect = 1e-22
 Identities = 38/174 (21%), Positives = 61/174 (35%), Gaps = 23/174 (13%)

Query: 39  VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRK 98
           +K+AD G A  +            T  YR+PEVLLG   + C  D+WS  C+  E+ T  
Sbjct: 171 IKIADLGNACWYDEHYTNSIQ---TREYRSPEVLLG-APWGCGADIWSTACLIFELITGD 226

Query: 99  PLFQGDS------EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK---- 148
            LF+ D       + D + +I  +L                +  +     N    K    
Sbjct: 227 FLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPL 286

Query: 149 ---------HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF 193
                      K+  ++  D L   L   P  R +A   + H +  D   + + 
Sbjct: 287 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI 340

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 1e-22
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 30/160 (18%)

Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           L+  +  I   +  VK+ D GLA             + T  + APE+    ++Y   VDV
Sbjct: 140 LKCDNIFITGPTGSVKIGDLGLATLK--RASFAKAVIGTPEFMAPEMY--EEKYDESVDV 195

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           ++ G    E+AT +  +       Q++R       P   +                    
Sbjct: 196 YAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFD-------------------- 235

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
                 K    +  +++E  +      R + ++ L H +F
Sbjct: 236 ------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 8e-22
 Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 23/155 (14%)

Query: 38  IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATR 97
           I+K+ DFG A+       + T    T +Y APEVL   ++Y    D+WS+G I   +   
Sbjct: 152 ILKLTDFGFAKETTSHNSLTTPCY-TPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCG 209

Query: 98  KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDG 157
            P F  +  +     +   +            ++  Y+   PEWS          + ++ 
Sbjct: 210 YPPFYSNHGLAISPGMKTRI------------RMGQYEFPNPEWS---------EVSEEV 248

Query: 158 LDLLEKTLIYCPATRINAENALKHKYFADKTDLPK 192
             L+   L   P  R+     + H +    T +P+
Sbjct: 249 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 283

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.8 bits (212), Expect = 5e-21
 Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 33/152 (21%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS--QRYSCPVDVWSIGCIFA 92
           +  +VK+ DFG A             V T ++ APEV+L     +Y   VDVWS+G    
Sbjct: 150 EPGLVKLGDFGSASIMAP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205

Query: 93  EIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
           E+A RKP     + +  L+ I +  +   +                             +
Sbjct: 206 ELAERKPPLFNMNAMSALYHIAQNESPALQS---------------------------GH 238

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKHKYF 184
             +   + ++  L   P  R  +E  LKH++ 
Sbjct: 239 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 1e-20
 Identities = 28/162 (17%), Positives = 49/162 (30%), Gaps = 37/162 (22%)

Query: 25  LQATSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           ++  +  I      +K+ DFG          +YT    T  Y  PE +   + +     V
Sbjct: 136 IKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 193

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS+G +  ++      F+ D EI +    FR                             
Sbjct: 194 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFR----------------------------- 224

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD 186
                 + +  +   L+   L   P+ R   E    H +  D
Sbjct: 225 ------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 2e-20
 Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 31/159 (19%)

Query: 29  SFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
              +  K   +K+ADFG+ +   +          T  Y APE+LLG Q+Y+  VD WS G
Sbjct: 132 DNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG-QKYNHSVDWWSFG 190

Query: 89  CIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK 148
            +  E+   +  F G  E +    I                        +P W       
Sbjct: 191 VLLYEMLIGQSPFHGQDEEELFHSIRM------------------DNPFYPRW------- 225

Query: 149 HVKNLDQDGLDLLEKTLIYCPATRINAENALK-HKYFAD 186
               L+++  DLL K  +  P  R+     ++ H  F +
Sbjct: 226 ----LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 260

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 2e-19
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 44/169 (26%)

Query: 32  IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
           +KP      +   +++ DFG A+      +       V T  Y +PE+L   +      D
Sbjct: 134 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE-KSACKSSD 192

Query: 84  VWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
           +W++GCI  ++    P F+  +E     +I ++                  +  FPE   
Sbjct: 193 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------------------EYDFPEK-- 232

Query: 144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENA------LKHKYFAD 186
                          DL+EK L+     R+  E          H +F  
Sbjct: 233 ---------FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 272

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 2e-18
 Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 35/161 (21%)

Query: 32  IKPKSNI-------VKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQR--YSC 80
           +K  +NI       VK+ DFGLA           +     ++ + APEV+    +  YS 
Sbjct: 130 LKS-NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188

Query: 81  PVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPE 140
             DV++ G +  E+ T +  +   +  DQ+  +            P +SK+         
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG-----RGYLSPDLSKVRS------- 236

Query: 141 WSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
                      N  +    L+ + L      R      L  
Sbjct: 237 -----------NCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 4e-16
 Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 32/155 (20%)

Query: 39  VKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQR-YSCPVDVWSIGCIFAEIAT 96
           V + DFGL++ F             T+ Y AP+++ G    +   VD WS+G +  E+ T
Sbjct: 168 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 227

Query: 97  RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQD 156
               F  D E +    I R +          +S                           
Sbjct: 228 GASPFTVDGEKNSQAEISRRILKSEPPYPQEMS-------------------------AL 262

Query: 157 GLDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
             DL+++ L+  P  R+     +A+   +H +F  
Sbjct: 263 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 4e-16
 Identities = 38/165 (23%), Positives = 55/165 (33%), Gaps = 24/165 (14%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIY----THEVVTLWYRAPEVLLGS----- 75
           +K   NI         +AD GLA               H V T  Y APEVL  S     
Sbjct: 134 LKS-KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 192

Query: 76  QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYK 135
                  D++++G +F EIA R  +  G  E  QL     V + P+ +    V      +
Sbjct: 193 FESFKRADIYAMGLVFWEIARRCSIG-GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR 251

Query: 136 TTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK 180
              P     C         +    ++ +      A R+ A    K
Sbjct: 252 PNIPNRWQSC------EALRVMAKIMRECWYANGAARLTALRIKK 290

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 72.1 bits (176), Expect = 9e-16
 Identities = 35/167 (20%), Positives = 55/167 (32%), Gaps = 41/167 (24%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP +NI       V+++D GLA  F       +    T  Y APEVL     Y    D 
Sbjct: 133 LKP-ANILLDEHGHVRISDLGLACDFSKKKPHASVG--THGYMAPEVLQKGVAYDSSADW 189

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           +S+GC+  ++      F+     D+   I R+  T   +     S               
Sbjct: 190 FSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSFSP-------------- 234

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFAD 186
                      +   LLE  L      R+      A+   +  +F  
Sbjct: 235 -----------ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 70.9 bits (173), Expect = 1e-15
 Identities = 37/154 (24%), Positives = 55/154 (35%), Gaps = 29/154 (18%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHE---VVTLWYRAPEVLLGSQRYSCPVDVWSI 87
            +   +N VKV DFG+ARA        T     + T  Y +PE   G        DV+S+
Sbjct: 142 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYSL 200

Query: 88  GCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
           GC+  E+ T +P F GDS +   ++  R    P      G+S                  
Sbjct: 201 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSA----------------- 243

Query: 148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
                   D   ++ K L   P  R      ++ 
Sbjct: 244 --------DLDAVVLKALAKNPENRYQTAAEMRA 269

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 1e-15
 Identities = 32/157 (20%), Positives = 48/157 (30%), Gaps = 35/157 (22%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           K   +K+ DFGL +              T  Y APEVL     Y   VD W +G +  E+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEM 198

Query: 95  ATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD 154
              +  F           I                     +  FP           + L 
Sbjct: 199 MCGRLPFYNQDHERLFELILME------------------EIRFP-----------RTLS 229

Query: 155 QDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 186
            +   LL   L   P  R+      A+  ++H++F  
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.1 bits (171), Expect = 3e-15
 Identities = 33/167 (19%), Positives = 58/167 (34%), Gaps = 46/167 (27%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP  NI       +K+ DFG A+       +      T  Y APEV+   + Y+  +D 
Sbjct: 130 LKP-ENILLDKNGHIKITDFGFAKYVP---DVTYTLCGTPDYIAPEVVST-KPYNKSIDW 184

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           WS G +  E+      F   + +    +I                     +  FP +   
Sbjct: 185 WSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------------------ELRFPPF--- 223

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 186
                    ++D  DLL + +    + R+       E+   H +F +
Sbjct: 224 --------FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 262

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 68.7 bits (167), Expect = 8e-15
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 12/108 (11%)

Query: 34  PKSNIVKVADFGLARAFGVPV-------RIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWS 86
             +N++ V DFG+ + +  PV       R   +   T  Y +    LG +  S   D+ +
Sbjct: 140 KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG-REQSRRDDLEA 198

Query: 87  IGCIFAEIATRKPLFQGDSEIDQLFRIFRVL----TTPTEDNWPGVSK 130
           +G +F         +QG        +  R+     +TP  +   G  +
Sbjct: 199 LGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPE 246

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 3e-14
 Identities = 35/165 (21%), Positives = 53/165 (32%), Gaps = 41/165 (24%)

Query: 32  IKPKSNI-------VKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
           ++  +NI        KVADFGLAR                + + APE  L   R++   D
Sbjct: 139 LRA-ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSD 196

Query: 84  VWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS 142
           VWS G +  E+ T+ +  + G    + L ++ R    P     P                
Sbjct: 197 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP---------------- 240

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK--HKYFA 185
                       +   DL+ +     P  R   E        YF 
Sbjct: 241 ------------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 273

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.3 bits (153), Expect = 9e-13
 Identities = 37/167 (22%), Positives = 53/167 (31%), Gaps = 46/167 (27%)

Query: 32  IKPKSNI-------VKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDV 84
           +KP  N+       ++V DFG A+                   APE++L  + Y+  VD 
Sbjct: 167 LKP-ENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTP---EALAPEIILS-KGYNKAVDW 221

Query: 85  WSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF 144
           W++G +  E+A   P F  D  I    +I                     K  FP     
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVS------------------GKVRFPSH--- 260

Query: 145 CLDKHVKNLDQDGLDLLEKTLIYCPATRIN-----AENALKHKYFAD 186
                      D  DLL   L      R         +   HK+FA 
Sbjct: 261 --------FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 2e-12
 Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 39/160 (24%)

Query: 32  IKPKSNI-------VKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
           +    N+       VK+ DFGLAR         +  +  + + + APE L     Y+   
Sbjct: 190 LAA-RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKS 247

Query: 83  DVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW 141
           DVWS G +  EI +     + G       +++ +                  +K   P +
Sbjct: 248 DVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ----------------NGFKMDQPFY 291

Query: 142 SNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
                        ++   +++    +    R +  N    
Sbjct: 292 -----------ATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 2e-12
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 33/148 (22%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           + N+ KV+DFGL +             + + + APE L   +++S   DVWS G +  EI
Sbjct: 138 EDNVAKVSDFGLTKEAS---STQDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEI 193

Query: 95  ATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
            +  +  +      D + R+ +                  YK   P+             
Sbjct: 194 YSFGRVPYPRIPLKDVVPRVEK-----------------GYKMDAPD-----------GC 225

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKH 181
                ++++       A R +     + 
Sbjct: 226 PPAVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.8 bits (149), Expect = 2e-12
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 12/112 (10%)

Query: 30  FCIKPKSNIVKVADFGLARAFG-------VPVRIYTHEVVTLWYRAPEVLLGSQRYSCPV 82
             +  K N+V + DFGLA+ +        +P R   +   T  Y +    LG    S   
Sbjct: 136 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRD 194

Query: 83  DVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRV----LTTPTEDNWPGVSK 130
           D+ S+G +          +QG     +  +  R+    ++TP E    G   
Sbjct: 195 DLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPS 246

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.6 bits (146), Expect = 7e-12
 Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 35  KSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           ++ +VK+ADFGL+R        +   ++ + + +  PE +    RY+   DVW+ G +  
Sbjct: 175 ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLW 233

Query: 93  EIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
           EI +     + G +  + ++ +         +N P
Sbjct: 234 EIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCP 268

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 9e-12
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 36/157 (22%)

Query: 35  KSNIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIF 91
             +  K++DFGL++A       Y   TH    + + APE +    ++S   DVWS G + 
Sbjct: 142 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLM 200

Query: 92  AEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV 150
            E  +  +  ++G    +    + +          P                        
Sbjct: 201 WEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCP------------------------ 236

Query: 151 KNLDQDGLDLLEKTLIYCPATRINA---ENALKHKYF 184
               ++  DL+     Y    R      E  L++ Y+
Sbjct: 237 ----REMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 1e-11
 Identities = 22/148 (14%), Positives = 44/148 (29%), Gaps = 29/148 (19%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVV-TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           ++ ++KV+DFG+ R         +      + + +PEV     RYS   DVWS G +  E
Sbjct: 136 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWE 194

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
           + +   +   +    ++                       ++   P              
Sbjct: 195 VFSEGKIPYENRSNSEVVEDIS----------------TGFRLYKPRL-----------A 227

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKH 181
                 ++       P  R      L+ 
Sbjct: 228 STHVYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 1e-11
 Identities = 23/149 (15%), Positives = 45/149 (30%), Gaps = 31/149 (20%)

Query: 35  KSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
              +VKV+DFGL+R                + +  PEVL+   ++S   D+W+ G +  E
Sbjct: 135 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWE 193

Query: 94  IATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
           I +  K  ++  +  +    I + L                                   
Sbjct: 194 IYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS-------------------------- 227

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH 181
             +    ++          R   +  L +
Sbjct: 228 --EKVYTIMYSCWHEKADERPTFKILLSN 254

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 2e-11
 Identities = 30/149 (20%), Positives = 49/149 (32%), Gaps = 32/149 (21%)

Query: 37  NIVKVADFGLARAFGVPVRIY---THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           ++VK+ DFGL RA       Y    H  V   + APE L   + +S   D W  G    E
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLWE 206

Query: 94  IATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN 152
           + T  +  + G +    L +I +                   +   PE           +
Sbjct: 207 MFTYGQEPWIGLNGSQILHKIDK----------------EGERLPRPE-----------D 239

Query: 153 LDQDGLDLLEKTLIYCPATRINAENALKH 181
             QD  +++ +   + P  R         
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDF 268

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 4e-11
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 35  KSNIVKVADFGLARAFGVP----VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
           +   VKVADFGLAR         V   T   + + + A E L   Q+++   DVWS G +
Sbjct: 165 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVL 223

Query: 91  FAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
             E+ TR  P +   +  D    + +       +  P
Sbjct: 224 LWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 260

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.2 bits (140), Expect = 5e-11
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 29/147 (19%)

Query: 35  KSNIVKVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAE 93
           ++++VKVADFGL+R   G     +      + + APE L    ++S   DVW+ G +  E
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWE 208

Query: 94  IATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
           IAT         ++ Q++ +                   DY+   PE             
Sbjct: 209 IATYGMSPYPGIDLSQVYELLE----------------KDYRMERPE-----------GC 241

Query: 154 DQDGLDLLEKTLIYCPATRINAENALK 180
            +   +L+     + P+ R +     +
Sbjct: 242 PEKVYELMRACWQWNPSDRPSFAEIHQ 268

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 1e-10
 Identities = 28/152 (18%), Positives = 41/152 (26%), Gaps = 29/152 (19%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCI 90
            +   ++ VK+ DFGL+R           +            +  +R++   DVW  G  
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198

Query: 91  FAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH 149
             EI       FQG    D + RI      P   N P                       
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP----------------------- 235

Query: 150 VKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
                     L+ K   Y P+ R         
Sbjct: 236 -----PTLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 7e-10
 Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 36/165 (21%)

Query: 28  TSFCIKPKSNIVKVADFGLARAFGVPVRIYTHEVV---TLWYRAPEVLLGSQRYSCPVDV 84
               +    +  K++DFGL++A G     YT        L + APE +   +++S   DV
Sbjct: 137 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF-RKFSSRSDV 195

Query: 85  WSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSN 143
           WS G    E  +  +  ++     + +  I +          P                 
Sbjct: 196 WSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP----------------- 238

Query: 144 FCLDKHVKNLDQDGLDLLEKTLIYCPATRINA---ENALKHKYFA 185
                       +   L+    IY    R +    E  ++  Y++
Sbjct: 239 -----------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.8 bits (131), Expect = 7e-10
 Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 7/98 (7%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTH-----EVVTLWYRAPEVLLGSQRYSCPVDVWSIGC 89
            + + KV+DFGL+R         T+       + + + APE +   ++++   DVWS G 
Sbjct: 163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY-RKFTSASDVWSYGI 221

Query: 90  IFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
           +  E+ +  +  +   +  D +  I +    P   + P
Sbjct: 222 VMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP 259

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (130), Expect = 9e-10
 Identities = 32/167 (19%), Positives = 56/167 (33%), Gaps = 22/167 (13%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHE--VVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
               VK+ DFGLA+  G   + Y  E   V + + A E +L  + Y+   DVWS G    
Sbjct: 146 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVW 204

Query: 93  EIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPG---------VSKLPDYKTTFPEWS 142
           E+ T     + G    +    + +    P                     D +  F E  
Sbjct: 205 ELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRE-- 262

Query: 143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD 189
              L      + +D     ++ L+     R++  +     ++    D
Sbjct: 263 ---LIIEFSKMARD----PQRYLVIQGDERMHLPSPTDSNFYRALMD 302

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 1e-09
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 11/104 (10%)

Query: 32  IKPKSNIV-------KVADFGLARAF-GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVD 83
           ++  +NI+       K+ADFGLAR                + + APE +     ++   D
Sbjct: 135 LRA-ANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY-GTFTIKSD 192

Query: 84  VWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
           VWS G +  EI T  +  + G +  + +  + R       DN P
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 1e-09
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 31/148 (20%)

Query: 35  KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEI 94
           ++ + K+ADFGL+R   V V+      + + + A E L     Y+   DVWS G +  EI
Sbjct: 162 ENYVAKIADFGLSRGQEVYVKKTMG-RLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEI 219

Query: 95  ATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL 153
            +     + G +  +   ++                    Y+   P            N 
Sbjct: 220 VSLGGTPYCGMTCAELYEKL-----------------PQGYRLEKPL-----------NC 251

Query: 154 DQDGLDLLEKTLIYCPATRINAENALKH 181
           D +  DL+ +     P  R +    L  
Sbjct: 252 DDEVYDLMRQCWREKPYERPSFAQILVS 279

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 3e-09
 Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 13/106 (12%)

Query: 32  IKPKSNI-------VKVADFGLARAF---GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCP 81
           +    NI        KV+DFGL+R            +   + + + APE +   ++++  
Sbjct: 136 LAA-RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY-RKFTSA 193

Query: 82  VDVWSIGCIFAEIATRKPLFQGDSEIDQLFR-IFRVLTTPTEDNWP 126
            DVWS G +  E+ T       +    ++ + I      PT  + P
Sbjct: 194 SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCP 239

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 1e-08
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 29  SFCIKPKSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVWS 86
             C+  +   VK+ DFG+ R        R     ++ + + +PE L     ++   DVWS
Sbjct: 162 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWS 220

Query: 87  IGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWP 126
            G +  EIAT  +  +QG S    L  +         DN P
Sbjct: 221 FGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCP 261

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 1e-08
 Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 31/150 (20%)

Query: 35  KSNIVKVADFGLARAFGVPVRIY--THEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFA 92
           + N+VK+ DFGLAR               + L + APE +   + Y+   DVWS G +  
Sbjct: 169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 227

Query: 93  EIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK 151
           EI +     + G    ++  R  +                   +   P++          
Sbjct: 228 EIFSLGASPYPGVKIDEEFCRRLK----------------EGTRMRAPDY---------- 261

Query: 152 NLDQDGLDLLEKTLIYCPATRINAENALKH 181
               +    +       P+ R      ++H
Sbjct: 262 -TTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 30/156 (19%)

Query: 28  TSFCIKPKSNIVKVADFGLARAF--GVPVRIYTHEVVTLWYRAPEVLLGSQRYSCPVDVW 85
               +  + N++K+ADFGLAR        +  T+  + + + APE L   + Y+   DVW
Sbjct: 163 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVW 221

Query: 86  SIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFC 145
           S G +  EI T          +++LF++ +                  ++   P      
Sbjct: 222 SFGVLLWEIFTLGGSPYPGVPVEELFKLLK----------------EGHRMDKPS----- 260

Query: 146 LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH 181
                 N   +   ++       P+ R   +  ++ 
Sbjct: 261 ------NCTNELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 1e-06
 Identities = 24/153 (15%), Positives = 51/153 (33%), Gaps = 31/153 (20%)

Query: 31  CIKPKSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIG 88
            +     I K+ DFGLAR         +  +  + + + APE +     Y+   DVWS G
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYG 234

Query: 89  CIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD 147
               E+ +     + G     + +++ +                  ++   PE       
Sbjct: 235 IFLWELFSLGSSPYPGMPVDSKFYKMIK----------------EGFRMLSPE------- 271

Query: 148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALK 180
               +   +  D+++      P  R   +  ++
Sbjct: 272 ----HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	197
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.97
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.96
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.96
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.96
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.96
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.96
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.96
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.95
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.95
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.95
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.94
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.94
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.92
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.91
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	97.02

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-39  Score=236.27  Aligned_cols=182  Identities=43%  Similarity=0.817  Sum_probs=150.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.+++.++.||++||+||         |||      +++.+||+|||.|+............+||+.|+|||++..
T Consensus        95 ~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  174 (299)
T d1ua2a_          95 LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG  174 (299)
T ss_dssp             SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHcc
Confidence            4699999999999999999999         888      5577899999999877665544556689999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      ...++.++||||+||++|+|++|..||.+.+..+.+..+.+..+.+....++......... ..............+..+
T Consensus       175 ~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s  253 (299)
T d1ua2a_         175 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV-TFKSFPGIPLHHIFSAAG  253 (299)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC-CCCCCCCCCHHHHCTTCC
T ss_pred             CCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhh-hhccCCCCChHHhcccCC
Confidence            6668999999999999999999999999999999999999999988887776655443322 122222333445557789


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                      +++.+||.+||+.||++||||+|+|+||||++...+.+
T Consensus       254 ~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p~~  291 (299)
T d1ua2a_         254 DDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP  291 (299)
T ss_dssp             HHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCCC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCCCCC
Confidence            99999999999999999999999999999998765443

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-38  Score=231.61  Aligned_cols=183  Identities=56%  Similarity=0.983  Sum_probs=159.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++..++.++.||++||+||         |||      .++.+||+|||.|+.............||+.|+|||.+.
T Consensus        96 ~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~  175 (298)
T d1gz8a_          96 LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL  175 (298)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHT
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhc
Confidence            45699999999999999999999         788      456789999999988766555566678999999999988


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .....+.++|+||+||++|+|++|+.||.+.+..+.+..+....+.+....++............+.+.........+..
T Consensus       176 ~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (298)
T d1gz8a_         176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPL  255 (298)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTC
T ss_pred             cccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCC
Confidence            76657899999999999999999999999999999999999998888888887777777777666666666666666789


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      +.++++|+.+||+.||++|||++|+++||||++..++.
T Consensus       256 s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p~  293 (298)
T d1gz8a_         256 DEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV  293 (298)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCCC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCCC
Confidence            99999999999999999999999999999999987753

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.8e-37  Score=226.89  Aligned_cols=179  Identities=49%  Similarity=0.934  Sum_probs=148.4

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+.+++..++.++.||++||+||         |||      +++.+||+|||.|..............+++.|+|||.+
T Consensus        93 ~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~  172 (286)
T d1ob3a_          93 CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL  172 (286)
T ss_dssp             STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHH
T ss_pred             hcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHH
Confidence            346799999999999999999999         777      55778999999998776555445556789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+...++.++|+||+||++++|++|+.||.+.+..+.+.++....+.+....++........................+.
T Consensus       173 ~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (286)
T d1ob3a_         173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKG  252 (286)
T ss_dssp             TTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCS
T ss_pred             hCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhccc
Confidence            87676899999999999999999999999999999999999999999888888777666665555555555555566677


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      .+..+.||+++||+.||++|||++|+++||||++
T Consensus       253 ~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         253 LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            8999999999999999999999999999999985

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-37  Score=226.82  Aligned_cols=179  Identities=46%  Similarity=0.745  Sum_probs=144.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..++.++.|+++||+||         |||      +++.+||+|||.++..... .......||+.|+|||++.
T Consensus       110 ~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~-~~~~~~~gT~~Y~APE~~~  188 (305)
T d1blxa_         110 EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLL  188 (305)
T ss_dssp             TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhccc-ccCCCcccChhhcCcchhc
Confidence            35699999999999999999999         888      4577899999998765433 2344568999999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|+|++|+.||.+.+..+.+..+....+.+....++.........  ...............+
T Consensus       189 ~~~-y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  265 (305)
T d1blxa_         189 QSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA--FHSKSAQPIEKFVTDI  265 (305)
T ss_dssp             TCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGG--SCCCCCCCGGGTCCSC
T ss_pred             CCC-CChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhh--hccccccchhhccccC
Confidence            755 8999999999999999999999999999999999999998888776665443322211  1111122233445678


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ++.+.+||.+||+.||++|||++|+++||||+++....
T Consensus       266 s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~~k  303 (305)
T d1blxa_         266 DELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCK  303 (305)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCCC
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchhhC
Confidence            99999999999999999999999999999999886544

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=222.48  Aligned_cols=155  Identities=25%  Similarity=0.331  Sum_probs=128.5

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      +++++.+++.++.||++||+||         |||      .++.+||+|||+|+............+||+.|+|||++.+
T Consensus       111 ~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~  190 (293)
T d1yhwa1         111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR  190 (293)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSS
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChhhhcC
Confidence            5699999999999999999999         777      5578999999999887655545556789999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++||||+||++|+|++|..||.+.+..+.+..+........                          .....++
T Consensus       191 ~~-~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~s  243 (293)
T d1yhwa1         191 KA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--------------------------QNPEKLS  243 (293)
T ss_dssp             SC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC--------------------------SSGGGSC
T ss_pred             CC-CCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC--------------------------CCcccCC
Confidence            44 89999999999999999999999999888877776654321110                          0113478


Q ss_pred             HhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         155 QDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ..+++||.+||+.||++|||++|+++||||+......
T Consensus       244 ~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~~~~~  280 (293)
T d1yhwa1         244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS  280 (293)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGCCCGG
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCCCCC
Confidence            8999999999999999999999999999998554433

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=219.79  Aligned_cols=146  Identities=27%  Similarity=0.373  Sum_probs=123.3

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++.+++.++.||++||+||         |||      +++.+||+|||+|+......  .....||+.|||||++.
T Consensus       100 ~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~--~~~~~Gt~~Y~APE~~~  177 (263)
T d2j4za1         100 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--RTTLCGTLDYLPPEMIE  177 (263)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC--CEETTEEGGGCCHHHHT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCc--ccccCCCCcccCHHHHc
Confidence            45799999999999999999999         888      55788999999998765432  23457999999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|+|++|+.||.+.+..+....+.+....                             ....+
T Consensus       178 ~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~p~~~  227 (263)
T d2j4za1         178 GRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------------------------FPDFV  227 (263)
T ss_dssp             TCC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC-----------------------------CCTTS
T ss_pred             CCC-CCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-----------------------------CCccC
Confidence            744 899999999999999999999999998888777776542111                             01346


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      ++++.+||.+||+.||++|||++|+++||||++
T Consensus       228 s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         228 TEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            789999999999999999999999999999975

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-36  Score=220.89  Aligned_cols=155  Identities=21%  Similarity=0.311  Sum_probs=125.0

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+.+++.+++.++.||++||.||         |||      .++.+||+|||+|+.............||+.|+|||++
T Consensus       103 ~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l  182 (288)
T d2jfla1         103 LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVV  182 (288)
T ss_dssp             HTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHHHH
Confidence            345699999999999999999999         888      55788999999997664433334456899999999998


Q ss_pred             cC----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          73 LG----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        73 ~~----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      ..    ...++.++||||+||++|+|++|..||.+.+..+.+..+........                          .
T Consensus       183 ~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~--------------------------~  236 (288)
T d2jfla1         183 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--------------------------A  236 (288)
T ss_dssp             TTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC--------------------------S
T ss_pred             hhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC--------------------------C
Confidence            52    34478999999999999999999999999888777776654211100                          0


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ....++.++.+||.+||+.||++|||++|+++||||+...
T Consensus       237 ~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~~  276 (288)
T d2jfla1         237 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS  276 (288)
T ss_dssp             SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCCC
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            1134788999999999999999999999999999998543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-36  Score=217.67  Aligned_cols=153  Identities=25%  Similarity=0.365  Sum_probs=119.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC--ccccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP--VRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~--~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++.+++.++.||++||+||         |||      +++.+||+|||+|+.....  .......+||+.|||||++
T Consensus        98 ~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~  177 (271)
T d1nvra_          98 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL  177 (271)
T ss_dssp             TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHh
Confidence            4699999999999999999999         788      5578999999999876432  2223456899999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+...++.++||||+||++|+|++|+.||...................                          ......
T Consensus       178 ~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~  231 (271)
T d1nvra_         178 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--------------------------LNPWKK  231 (271)
T ss_dssp             HCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTT--------------------------STTGGG
T ss_pred             cCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--------------------------CCcccc
Confidence            875545678999999999999999999998765443332222210000                          011144


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ++.++.+||.+||+.||++|||++|+++||||++..
T Consensus       232 ~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~l  267 (271)
T d1nvra_         232 IDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  267 (271)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcCC
Confidence            788999999999999999999999999999998543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.8e-36  Score=220.02  Aligned_cols=152  Identities=24%  Similarity=0.328  Sum_probs=113.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC---------CCCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP---------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp---------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+++.+++.++.||++||+||         |||         +++.+||+|||+|+....... ....+||+.|||||+
T Consensus       102 ~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~-~~~~~GT~~y~APE~  180 (307)
T d1a06a_         102 GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-LSTACGTPGYVAPEV  180 (307)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------------CTTSCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCe-eeeeeeCccccCcHH
Confidence            4699999999999999999999         777         356799999999986654332 334679999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++||||+||++|+|++|..||.+.........+.......+.                         ...+
T Consensus       181 ~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~  234 (307)
T d1a06a_         181 LAQKP-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS-------------------------PYWD  234 (307)
T ss_dssp             HTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCT-------------------------TTTT
T ss_pred             HcCCC-CCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCC-------------------------cccc
Confidence            98754 899999999999999999999999998888777776653222111                         1124


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      .+|.++.+||.+||+.||++|||++|+++||||++..
T Consensus       235 ~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  271 (307)
T d1a06a_         235 DISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT  271 (307)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSC
T ss_pred             CCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            5788999999999999999999999999999998643

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-35  Score=218.84  Aligned_cols=149  Identities=22%  Similarity=0.277  Sum_probs=126.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...++|..++.++.||+.||+||         |||      +++.+||+|||+|+............+||+.|+|||++.
T Consensus        99 ~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~  178 (337)
T d1o6la_          99 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE  178 (337)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGS
T ss_pred             ccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhcc
Confidence            35699999999999999999999         777      568899999999987765544555678999999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++|+||+||++|+|++|+.||.+.+.......+.......                             +..+
T Consensus       179 ~~~-y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~  228 (337)
T d1o6la_         179 DND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF-----------------------------PRTL  228 (337)
T ss_dssp             SSC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------------------------CTTS
T ss_pred             CCC-CChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCC-----------------------------CccC
Confidence            755 8999999999999999999999999998877777665421111                             1347


Q ss_pred             CHhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      |.++++||.+||+.||++|++     ++|+++||||++.
T Consensus       229 s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         229 SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence            889999999999999999994     9999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=216.85  Aligned_cols=156  Identities=21%  Similarity=0.346  Sum_probs=124.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~   71 (197)
                      ...+++..++.++.|+++||+||         |||      +++.+||+|||+|+......  ......+||+.|+|||+
T Consensus       102 ~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~  181 (288)
T d1uu3a_         102 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL  181 (288)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCcee
Confidence            35799999999999999999999         777      55788999999998775432  22334579999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++||||+||++|+|++|..||.+.+.......+...-..                             ...
T Consensus       182 ~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~p~  231 (288)
T d1uu3a_         182 LTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD-----------------------------FPE  231 (288)
T ss_dssp             HHTCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCC-----------------------------CCT
T ss_pred             eccCC-CCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCC-----------------------------CCc
Confidence            98755 899999999999999999999999998888877777542111                             013


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHH------HhcCcccCCCCCcchhhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAEN------ALKHKYFADKTDLPKFAE  195 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~e------ll~hp~~~~~~~~~~~~~  195 (197)
                      .++.++++||.+||+.||++|||++|      +++||||+++ +++++.+
T Consensus       232 ~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i-~w~~l~~  280 (288)
T d1uu3a_         232 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV-TWENLHQ  280 (288)
T ss_dssp             TCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC-CCTTGGG
T ss_pred             cCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC-CHHHhhc
Confidence            46789999999999999999999998      6889999987 4555543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=7.1e-36  Score=223.45  Aligned_cols=154  Identities=22%  Similarity=0.330  Sum_probs=127.5

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCC--------CCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPK--------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~--------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ..++++.+++.++.||++||+||         |||+        ++.+||+|||+|+....... .....||+.|||||+
T Consensus       118 ~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~-~~~~~gT~~Y~aPEv  196 (350)
T d1koaa2         118 HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTTGTAEFAAPEV  196 (350)
T ss_dssp             TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC-EEEECSCTTTCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccc-cceecCcccccCHHH
Confidence            34699999999999999999999         7773        46789999999987755432 345678999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++||||+||++|+|++|..||.+.+..+.+..+.........                         ....
T Consensus       197 ~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~  250 (350)
T d1koaa2         197 AEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD-------------------------SAFS  250 (350)
T ss_dssp             HHTCC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCC-------------------------GGGG
T ss_pred             HcCCC-CChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc-------------------------cccc
Confidence            98754 889999999999999999999999999888888877653322211                         1124


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .+|.++++||.+||+.||++|||++|+++||||++...
T Consensus       251 ~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         251 GISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             GCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTC
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence            57889999999999999999999999999999987643

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-36  Score=216.28  Aligned_cols=146  Identities=23%  Similarity=0.300  Sum_probs=116.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc--------------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC--------------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAP   69 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l--------------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aP   69 (197)
                      ..+++..++.++.|+++||+||              |||      +++.+||+|||+|+.............||+.||||
T Consensus       104 ~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~AP  183 (269)
T d2java1         104 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP  183 (269)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCH
Confidence            4699999999999999999998              677      55789999999998876554445567889999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      |++.+.. ++.++||||+||++|+|++|..||.+.+..+....+......                            ..
T Consensus       184 E~l~~~~-~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~----------------------------~~  234 (269)
T d2java1         184 EQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR----------------------------RI  234 (269)
T ss_dssp             HHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC----------------------------CC
T ss_pred             HHHcCCC-CChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC----------------------------CC
Confidence            9997744 899999999999999999999999998887777776542111                            01


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCccc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYF  184 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~  184 (197)
                      ...+|.++.+||.+||+.||++|||++|+++|||+
T Consensus       235 ~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         235 PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             CcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            13467899999999999999999999999999996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.4e-35  Score=219.91  Aligned_cols=151  Identities=23%  Similarity=0.345  Sum_probs=126.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC--------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP--------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp--------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .++++.+++.++.||++||+||         |||        +++.+||+|||+|+...... ......+|+.|+|||++
T Consensus       122 ~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~  200 (352)
T d1koba_         122 YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTATAEFAAPEIV  200 (352)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-CEEEECSSGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCC-ceeeccCcccccCHHHH
Confidence            3699999999999999999999         777        34678999999998776543 23445789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+.. ++.++||||+||++|+|++|..||.+.+..+.+..+......++..                         ....
T Consensus       201 ~~~~-~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~-------------------------~~~~  254 (352)
T d1koba_         201 DREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDED-------------------------AFSS  254 (352)
T ss_dssp             TTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSS-------------------------TTTT
T ss_pred             cCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcc-------------------------cccC
Confidence            7754 8999999999999999999999999999888888876643332211                         1245


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      ++.++.+||.+||+.||++|||++|+++||||++.
T Consensus       255 ~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         255 VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            78999999999999999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-35  Score=211.65  Aligned_cols=147  Identities=21%  Similarity=0.282  Sum_probs=116.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc-----------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC-----------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l-----------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ...+++..++.++.||++||+||           |||       +++.+||+|||+|+......  ....+||+.|||||
T Consensus       106 ~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~--~~~~~GT~~Y~aPE  183 (270)
T d1t4ha_         106 FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF--AKAVIGTPEFMAPE  183 (270)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS--BEESCSSCCCCCGG
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCc--cCCcccCccccCHH
Confidence            35799999999999999999999           666       45789999999998654332  33558999999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      ++.+ . ++.++||||+||++|+|++|+.||........+.+.......+                          ....
T Consensus       184 ~~~~-~-~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~--------------------------~~~~  235 (270)
T d1t4ha_         184 MYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--------------------------ASFD  235 (270)
T ss_dssp             GGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--------------------------GGGG
T ss_pred             HhCC-C-CCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC--------------------------cccC
Confidence            9864 3 8999999999999999999999998766555443332210000                          0111


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      ...++++.+||.+||+.||++|||++|+++||||+
T Consensus       236 ~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         236 KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             ccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            34678899999999999999999999999999996

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-34  Score=211.86  Aligned_cols=183  Identities=47%  Similarity=0.781  Sum_probs=145.8

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+.+++..++.++.|+++||+||         |||      .++.+||+|||.|+.............++..|+|||.+
T Consensus        94 ~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~  173 (292)
T d1unla_          94 CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL  173 (292)
T ss_dssp             TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhhhhHh
Confidence            446799999999999999999999         888      44678999999999876655555556778999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCC-CCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPL-FQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .....++.++||||+||++|+|++|+.| |.+.+..+....+....+.+....++.........................
T Consensus       174 ~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (292)
T d1unla_         174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP  253 (292)
T ss_dssp             TTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTST
T ss_pred             ccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccc
Confidence            8766678999999999999999998877 456667777888888888887776666555444433222222233344456


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      ..++.+++||.+||+.||++||||+|+|+||||++..++
T Consensus       254 ~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~~~  292 (292)
T d1unla_         254 KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP  292 (292)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCSCC
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCCCC
Confidence            788999999999999999999999999999999987653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7e-35  Score=214.67  Aligned_cols=154  Identities=25%  Similarity=0.380  Sum_probs=125.6

Q ss_pred             HhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390           7 LEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         7 ~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      ....++++.+++.++.||++||.||         |||      +++.+||+|||+|+.....    ....||+.|||||+
T Consensus       107 ~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~----~~~~GT~~Y~APE~  182 (309)
T d1u5ra_         107 VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NSFVGTPYWMAPEV  182 (309)
T ss_dssp             HHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB----CCCCSCGGGCCHHH
T ss_pred             HhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCC----CccccCccccCHHH
Confidence            3446799999999999999999999         888      5578899999999866432    34578999999999


Q ss_pred             hcC--CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          72 LLG--SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        72 ~~~--~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      +.+  ...++.++||||+||++|+|++|..||.+....+.+..+........                           .
T Consensus       183 ~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~---------------------------~  235 (309)
T d1u5ra_         183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---------------------------Q  235 (309)
T ss_dssp             HTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC---------------------------S
T ss_pred             HhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC---------------------------C
Confidence            964  23488999999999999999999999999888877777654221110                           0


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      ...+|..+.+||.+||+.||++|||++|+++||||+......
T Consensus       236 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~~~~  277 (309)
T d1u5ra_         236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT  277 (309)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCTT
T ss_pred             CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCCCch
Confidence            134678999999999999999999999999999998654443

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-35  Score=220.01  Aligned_cols=178  Identities=28%  Similarity=0.543  Sum_probs=136.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC-------CCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK-------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~-------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      .++++.+++.++.||++||+||         |||+       +..+||+|||+++...... .....+||..|+|||.+.
T Consensus       117 ~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~  195 (350)
T d1q5ka_         117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPELIF  195 (350)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS-CCCSCCSCTTSCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCc-ccccccccccccChHHhh
Confidence            4699999999999999999999         7772       3478999999998765433 234458899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc-hhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS-NFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  152 (197)
                      +...++.++||||+||++|+|++|..||...+..+.+..+.+.++.+..+.+........ ...++... ........+.
T Consensus       196 ~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  274 (350)
T d1q5ka_         196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT-EFKFPQIKAHPWTKVFRPR  274 (350)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC----CCCCCCCCCCCGGGTSCTT
T ss_pred             cccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh-hccccccccCchhhhcccC
Confidence            766689999999999999999999999999999999999988887766543322111000 00011110 1111223356


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .+.++.+||.+||..||++||||+|+|+||||++..+
T Consensus       275 ~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  311 (350)
T d1q5ka_         275 TPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  311 (350)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence            7899999999999999999999999999999987644

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-34  Score=216.02  Aligned_cols=145  Identities=23%  Similarity=0.330  Sum_probs=123.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++.+++.++.||+.||.||         |||      .++.+||+|||+|+.....   .....||+.|||||++.+
T Consensus       136 ~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~---~~~~~Gt~~Y~APE~~~~  212 (350)
T d1rdqe_         136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---TWTLCGTPEALAPEIILS  212 (350)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---BCCCEECGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc---cccccCccccCCHHHHcC
Confidence            5799999999999999999999         888      5578899999999877543   234589999999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNLD  154 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (197)
                      .. ++.++||||+||++|+|++|..||.+.+.......+.......                             ...++
T Consensus       213 ~~-~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~s  262 (350)
T d1rdqe_         213 KG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----------------------------PSHFS  262 (350)
T ss_dssp             CC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------------------------CTTCC
T ss_pred             CC-CCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCC-----------------------------CccCC
Confidence            44 8999999999999999999999999988888777776532111                             13478


Q ss_pred             HhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         155 QDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       155 ~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      .++.+||++||+.||++|+     |++++++||||++.
T Consensus       263 ~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence            8999999999999999995     99999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-35  Score=219.63  Aligned_cols=179  Identities=36%  Similarity=0.594  Sum_probs=139.0

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++..++.++.||++||+||         |||      .++.+|++|||.|+......   ....+|+.|+|||++.
T Consensus       115 ~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~---~~~~~t~~y~aPE~~~  191 (346)
T d1cm8a_         115 HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM---TGYVVTRWYRAPEVIL  191 (346)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSC---CSSCSCGGGCCTHHHH
T ss_pred             hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCcc---ccccccccccCHHHHc
Confidence            45799999999999999999999         777      56788999999998765432   3467899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  151 (197)
                      +...++.++||||+||++++|++|..||.+.+..+.+..+....+.++...+.......  ......+............
T Consensus       192 ~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (346)
T d1cm8a_         192 NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILT  271 (346)
T ss_dssp             TTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCT
T ss_pred             CCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhcc
Confidence            76668899999999999999999999999999999988888887776654332221100  0000111111222333446


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      .++..+.+||.+||..||++|||++|+|+||||++..+.
T Consensus       272 ~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~  310 (346)
T d1cm8a_         272 NASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT  310 (346)
T ss_dssp             TCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred             CCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCc
Confidence            788999999999999999999999999999999976543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-34  Score=214.29  Aligned_cols=149  Identities=24%  Similarity=0.354  Sum_probs=126.0

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..++++.+++.++.||+.||+||         |||      +++.+||+|||.++.............||+.|+|||++.
T Consensus        97 ~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (320)
T d1xjda_          97 CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILL  176 (320)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCcCCHHHHc
Confidence            35699999999999999999999         777      568899999999987765555555678999999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|+|++|+.||.+.+.......+......                             ....+
T Consensus       177 ~~~-~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~-----------------------------~p~~~  226 (320)
T d1xjda_         177 GQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF-----------------------------YPRWL  226 (320)
T ss_dssp             TCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-----------------------------CCTTS
T ss_pred             CCC-CCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-----------------------------CCccC
Confidence            755 899999999999999999999999998888777776532110                             01347


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHH-HHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAE-NALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~-ell~hp~~~~~  187 (197)
                      |.++.+||.+||+.||++|||++ ++++||||++.
T Consensus       227 s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         227 EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             CHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             CHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence            88999999999999999999996 89999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-34  Score=210.13  Aligned_cols=150  Identities=22%  Similarity=0.255  Sum_probs=120.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++.+++.++.||++||+||         |||       +++.+||+|||+|+......  .....||+.|+|||++
T Consensus       104 ~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~--~~~~~GT~~y~aPE~~  181 (273)
T d1xwsa_         104 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI  181 (273)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSC--BCCCCSCGGGSCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceeccccc--ccccccCCCcCCHHHH
Confidence            35699999999999999999999         777       34678999999998654432  3345789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      .+...++.++||||+||++|+|++|+.||...+      .+.....                             .....
T Consensus       182 ~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~~~-----------------------------~~~~~  226 (273)
T d1xwsa_         182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV-----------------------------FFRQR  226 (273)
T ss_dssp             HHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCC-----------------------------CCSSC
T ss_pred             cCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhhccc-----------------------------CCCCC
Confidence            865545678999999999999999999997532      1221100                             01134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchhhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKFAE  195 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~~~  195 (197)
                      +|.++.+||.+||..||++|||++|+++||||++...+.+..+
T Consensus       227 ~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~~p~e~~~  269 (273)
T d1xwsa_         227 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE  269 (273)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCHHHHHH
T ss_pred             CCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCCCCCccc
Confidence            7899999999999999999999999999999999877666554

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-34  Score=211.45  Aligned_cols=183  Identities=35%  Similarity=0.614  Sum_probs=137.4

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc----cccccceeccceeCc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV----RIYTHEVVTLWYRAP   69 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~----~~~~~~~~~~~y~aP   69 (197)
                      ...+++..++.++.|+++||.||         |||      +++.+||+|||+++..+...    ......+||+.|+||
T Consensus       111 ~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aP  190 (318)
T d3blha1         111 LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP  190 (318)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCH
T ss_pred             ccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhH
Confidence            35799999999999999999999         777      56778999999997665322    122345789999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCccc-chhhhh-
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEW-SNFCLD-  147 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-  147 (197)
                      |++.+...++.++||||+||++|+|++|+.||.+.+.......+.+..+.+....+................ ...... 
T Consensus       191 E~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (318)
T d3blha1         191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD  270 (318)
T ss_dssp             HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHH
T ss_pred             HHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchh
Confidence            999876668999999999999999999999999999999999999988887776555544332221110000 000000 


Q ss_pred             -hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         148 -KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       148 -~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                       -.....+..++|||.+||+.||++||||+|+++||||+...-+.
T Consensus       271 ~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p~p~  315 (318)
T d3blha1         271 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS  315 (318)
T ss_dssp             HHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSSCCC
T ss_pred             hhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCCCCC
Confidence             00122467889999999999999999999999999999654333

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-34  Score=211.93  Aligned_cols=153  Identities=22%  Similarity=0.340  Sum_probs=124.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCCC----------cEEEeecCCccccCCCccccccceeccceeCch
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKSN----------IVKVADFGLARAFGVPVRIYTHEVVTLWYRAPE   70 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~----------~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE   70 (197)
                      ..+++..++.++.|+++||+||         |||+|.          .+||+|||+|+....... .....+|+.|+|||
T Consensus       108 ~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~-~~~~~~t~~y~APE  186 (293)
T d1jksa_         108 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPE  186 (293)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCB-CSCCCCCGGGCCHH
T ss_pred             cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCcc-ccccCCCCcccCHH
Confidence            5699999999999999999999         777332          489999999987754432 33457899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      ++.+.. ++.++||||+||++|+|++|..||.+.+..+....+........                         ....
T Consensus       187 ~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~  240 (293)
T d1jksa_         187 IVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE-------------------------DEYF  240 (293)
T ss_dssp             HHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC-------------------------HHHH
T ss_pred             HHcCCC-CCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC-------------------------chhc
Confidence            998744 89999999999999999999999999988888777754321111                         1222


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      +.+|..+++||.+||+.||++|||++|+++||||++...
T Consensus       241 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~  279 (293)
T d1jksa_         241 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT  279 (293)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC---
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCh
Confidence            557899999999999999999999999999999986543

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.8e-34  Score=215.85  Aligned_cols=151  Identities=21%  Similarity=0.265  Sum_probs=119.8

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++.+++.++.||+.||+||         |||      +++.+||+|||+|+......  .....||+.|+|||++.
T Consensus       101 ~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~--~~~~~GT~~y~APE~~~  178 (364)
T d1omwa3         101 HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVGTHGYMAPEVLQ  178 (364)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC--CCSCCSCGGGCCHHHHS
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCc--ccccccccccchhHHhh
Confidence            35699999999999999999999         888      55788999999998765432  33457999999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      ....++.++||||+||++|+|++|..||.+....+........... ..                         .....+
T Consensus       179 ~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-~~-------------------------~~~~~~  232 (364)
T d1omwa3         179 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-AV-------------------------ELPDSF  232 (364)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSC-CC-------------------------CCCSSS
T ss_pred             cCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC-CC-------------------------CCCCCC
Confidence            6566899999999999999999999999876543322221111111 00                         111347


Q ss_pred             CHhHHHHHHhhcccCCCCCCC-----HHHHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRIN-----AENALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s-----~~ell~hp~~~~~  187 (197)
                      |.++++||.+||+.||++|||     |+|+++||||+++
T Consensus       233 s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         233 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence            889999999999999999999     7999999999876

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=6.6e-34  Score=206.55  Aligned_cols=152  Identities=23%  Similarity=0.318  Sum_probs=125.1

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++.+++.++.||++||+||         |||      +++.+||+|||+++....... .....||+.|+|||.+.
T Consensus       104 ~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~~~~~gt~~y~~PE~~~  182 (277)
T d1phka_         104 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREVCGTPSYLAPEIIE  182 (277)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCC-BCCCCSCGGGCCHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccCCCc-eeeeeccCCCCCHHHhh
Confidence            35799999999999999999999         777      667889999999987765332 34457899999999985


Q ss_pred             C-----CCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          74 G-----SQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        74 ~-----~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      +     ...++.++||||+||++|+|++|+.||.+.+..+....+......+..                         .
T Consensus       183 ~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~-------------------------~  237 (277)
T d1phka_         183 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS-------------------------P  237 (277)
T ss_dssp             HHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT-------------------------T
T ss_pred             ccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCC-------------------------c
Confidence            2     234688999999999999999999999999888877777653221111                         1


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      ....+|+++++|+.+||+.||++|||++|+++||||++
T Consensus       238 ~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         238 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            12457899999999999999999999999999999985

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.8e-34  Score=210.09  Aligned_cols=146  Identities=22%  Similarity=0.297  Sum_probs=124.0

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      ...+++..++.++.||+.||+||         |||      +++.+||+|||+|+......   ...+||+.|||||++.
T Consensus        98 ~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~---~~~~Gt~~Y~APE~l~  174 (316)
T d1fota_          98 SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT---YTLCGTPDYIAPEVVS  174 (316)
T ss_dssp             TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB---CCCCSCTTTCCHHHHT
T ss_pred             cccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecccc---ccccCcccccCHHHHc
Confidence            35689999999999999999999         777      56789999999998765432   3458999999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|+|++|+.||.+.+..+...++.......                             .+.+
T Consensus       175 ~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~  224 (316)
T d1fota_         175 TKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF-----------------------------PPFF  224 (316)
T ss_dssp             TCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCC-----------------------------CTTS
T ss_pred             CCC-CCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCC-----------------------------CCCC
Confidence            744 8999999999999999999999999998888887776521111                             1346


Q ss_pred             CHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~  187 (197)
                      +.++.+++.+||..||++|+     |++++++||||++.
T Consensus       225 s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         225 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             CHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence            78999999999999999996     99999999999976

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-35  Score=216.71  Aligned_cols=175  Identities=21%  Similarity=0.293  Sum_probs=115.2

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc----------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC----------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l----------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++..++.++.|+++||.||          |||      +++.+||+|||+|+.....  .....+||+.|+|||++
T Consensus        98 ~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--~~~~~~GT~~Y~APEvl  175 (322)
T d1s9ja_          98 AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERL  175 (322)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--TC---CCSSCCCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCC--ccccccCCccccCchHH
Confidence            35699999999999999999999          788      5578899999999865322  22345899999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHH-HHHHHhhcCCCCCCC----CCCCCCCCCCCCCCc-----ccc
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQ-LFRIFRVLTTPTEDN----WPGVSKLPDYKTTFP-----EWS  142 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-----~~~  142 (197)
                      .+.. ++.++||||+||++|+|++|+.||.+.+.... ........+......    ..............+     ...
T Consensus       176 ~~~~-y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (322)
T d1s9ja_         176 QGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELL  254 (322)
T ss_dssp             HCSC-CCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHH
T ss_pred             cCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHH
Confidence            8855 99999999999999999999999987654322 211111111111000    000000000000000     000


Q ss_pred             hhhhhhc-----cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCC
Q psy6390         143 NFCLDKH-----VKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFAD  186 (197)
Q Consensus       143 ~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~  186 (197)
                      .......     ....|.++++||.+||+.||++|||++|+|+||||++
T Consensus       255 ~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         255 DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             HHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             hhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence            0000000     1235789999999999999999999999999999974

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-34  Score=212.66  Aligned_cols=185  Identities=32%  Similarity=0.603  Sum_probs=138.1

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCc
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAP   69 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aP   69 (197)
                      ..+++++..++.++.|+++||+||         |||      +++.+||+|||+|+.......   .....+||+.|+||
T Consensus       102 ~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aP  181 (345)
T d1pmea_         102 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP  181 (345)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCG
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechH
Confidence            345799999999999999999999         787      557789999999986543221   23456789999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCC--CCCCCCcccchhhhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLP--DYKTTFPEWSNFCLD  147 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  147 (197)
                      |++.....++.++||||+||++++|++|+.||.+.+..+...........+............  ......+........
T Consensus       182 E~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (345)
T d1pmea_         182 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN  261 (345)
T ss_dssp             GGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHH
T ss_pred             HHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHH
Confidence            999766668899999999999999999999999998888888877766665433211111000  000001111111223


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcch
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPK  192 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~  192 (197)
                      ...+.++..+++|+.+||+.||++|||++|+|+||||++..+..+
T Consensus       262 ~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~~  306 (345)
T d1pmea_         262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD  306 (345)
T ss_dssp             HHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred             HhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCCcc
Confidence            344678899999999999999999999999999999997766543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-34  Score=215.47  Aligned_cols=157  Identities=21%  Similarity=0.336  Sum_probs=117.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC---------CCcEEEeecCCccccCCCccccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK---------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~---------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~   71 (197)
                      .++++.+++.++.||+.||+||         |||+         ++.+||+|||+|+...... ......||+.|+|||+
T Consensus       106 ~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~  184 (335)
T d2ozaa1         106 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVAPEV  184 (335)
T ss_dssp             CCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC-CCCCCSCCCSSCCCCC
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCCC-ccccccCCcccCCcHH
Confidence            4699999999999999999999         7773         3568999999998765433 2345689999999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +.+.. ++.++||||+||++|+|++|+.||.+.+.......+........              ..++       .....
T Consensus       185 ~~~~~-y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~--------------~~~~-------~~~~~  242 (335)
T d2ozaa1         185 LGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--------------YEFP-------NPEWS  242 (335)
T ss_dssp             CCGGG-GSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCS--------------SSCC-------TTHHH
T ss_pred             HcCCC-CCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCC--------------CCCC-------Ccccc
Confidence            97654 89999999999999999999999987655444433322111100              0000       01113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~  189 (197)
                      .+|.++.+||.+||+.||++|||++|+++||||++...
T Consensus       243 ~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~  280 (335)
T d2ozaa1         243 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  280 (335)
T ss_dssp             HSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTS
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCC
Confidence            47889999999999999999999999999999976543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-33  Score=210.05  Aligned_cols=180  Identities=34%  Similarity=0.554  Sum_probs=134.8

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++++.+++.++.||+.||+||         |||      .++.+|++|||.+......   .....|++.|+|||.+.
T Consensus       115 ~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~---~~~~~g~~~y~apE~~~  191 (348)
T d2gfsa1         115 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML  191 (348)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG---GSSSCHHHHTSCHHHHT
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcc---cccccccccccCchhhc
Confidence            35799999999999999999999         787      5567899999999765432   33557899999999988


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC--CCCCCCCcccchhhhhhccC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL--PDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  151 (197)
                      +...++.++||||+||++|+|++|..||.+.+.......+....+.+..+........  ..+.................
T Consensus       192 ~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (348)
T d2gfsa1         192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFI  271 (348)
T ss_dssp             TCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHST
T ss_pred             CCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcC
Confidence            7666789999999999999999999999999998888888887776554322211110  00001111111222333446


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLP  191 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~  191 (197)
                      .++..+++||.+||+.||++|||++|+|+||||++..+++
T Consensus       272 ~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~  311 (348)
T d2gfsa1         272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD  311 (348)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred             CCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCc
Confidence            7899999999999999999999999999999999876543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-33  Score=207.93  Aligned_cols=150  Identities=21%  Similarity=0.357  Sum_probs=124.7

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccCCC--------CcEEEeecCCccccCCCccccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKPKS--------NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp~~--------~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++.+++.++.||++||+||         |||+|        ..+||+|||+++....... .....+|+.|+|||.+.
T Consensus        98 ~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~-~~~~~~t~~y~ape~~~  176 (321)
T d1tkia_          98 ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN-FRLLFTAPEYYAPEVHQ  176 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE-EEEEESCGGGSCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCc-ccccccccccccchhcc
Confidence            699999999999999999999         77733        4689999999987654332 33457899999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      +.. ++.++||||+||++|+|++|..||.+.+..+....+.+....++                         ...++.+
T Consensus       177 ~~~-~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~  230 (321)
T d1tkia_         177 HDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD-------------------------EEAFKEI  230 (321)
T ss_dssp             TCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC-------------------------HHHHTTS
T ss_pred             CCC-CCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-------------------------hhhccCC
Confidence            755 88999999999999999999999999998888888765322211                         1222457


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKHKYFADK  187 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~  187 (197)
                      |.++++||.+||..||++|||++|+++||||++.
T Consensus       231 s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         231 SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            8999999999999999999999999999999754

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.4e-32  Score=204.35  Aligned_cols=178  Identities=28%  Similarity=0.560  Sum_probs=126.6

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC-------CCCcEEEeecCCccccCCCccccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP-------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp-------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~   72 (197)
                      .+++++.+++.++.||+.||+||         |||       ++..+||+|||.|+....... .....+|+.|+|||.+
T Consensus       123 ~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~-~~~~~~t~~y~aPE~~  201 (328)
T d3bqca1         123 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELL  201 (328)
T ss_dssp             TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC-CCSCCSCGGGCCHHHH
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCc-ccccccCccccCcccc
Confidence            45799999999999999999999         777       345689999999987654332 3455789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCCCCC---------CCCCCCCCCCCCCCcccc
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-EIDQLFRIFRVLTTPTEDN---------WPGVSKLPDYKTTFPEWS  142 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~  142 (197)
                      .+...++.++||||+||+++++++|..||.... ..+....+...++.+....         ......... ......+.
T Consensus       202 ~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  280 (328)
T d3bqca1         202 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILG-RHSRKRWE  280 (328)
T ss_dssp             TTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCC-CCCCCCGG
T ss_pred             cCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcc-cccccchh
Confidence            876668999999999999999999999997654 4444444444433211100         000000000 00011111


Q ss_pred             hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCC
Q psy6390         143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKT  188 (197)
Q Consensus       143 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~  188 (197)
                      ..........++.++.|||++||..||++|||++|+|+||||+++.
T Consensus       281 ~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             GGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             hcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            1122222345789999999999999999999999999999999863

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.8e-33  Score=207.45  Aligned_cols=185  Identities=34%  Similarity=0.484  Sum_probs=128.5

Q ss_pred             hHHHhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeC
Q psy6390           4 LIQLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRA   68 (197)
Q Consensus         4 ~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~a   68 (197)
                      +++.....+++..++.++.|++.||+||         |||      .++.++++|||.++...... ......+|+.|+|
T Consensus       108 l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~-~~~~~~~t~~y~a  186 (355)
T d2b1pa1         108 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRA  186 (355)
T ss_dssp             HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------------CCTTCC
T ss_pred             HHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccccc-ccccccccccccC
Confidence            3444556799999999999999999999         888      45778999999988665433 2344578999999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCC------CCCCCCCcccc
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKL------PDYKTTFPEWS  142 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~  142 (197)
                      ||++.+.. ++.++||||+||++++|++|+.||.+.+.......+......+..+.+......      .........+.
T Consensus       187 PE~l~~~~-~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (355)
T d2b1pa1         187 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP  265 (355)
T ss_dssp             HHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHH
T ss_pred             hhhhcCCC-CCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccc
Confidence            99998754 899999999999999999999999999999888888887777655443332210      00000000000


Q ss_pred             hhhhh-------hccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCc
Q psy6390         143 NFCLD-------KHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDL  190 (197)
Q Consensus       143 ~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~  190 (197)
                      .....       ......+.++++||++||..||++||||+|+|+||||+...+.
T Consensus       266 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~~  320 (355)
T d2b1pa1         266 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP  320 (355)
T ss_dssp             HHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred             cccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCCCc
Confidence            00000       0112246788999999999999999999999999999875543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.4e-32  Score=195.09  Aligned_cols=150  Identities=20%  Similarity=0.197  Sum_probs=113.0

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~   71 (197)
                      ..++++..+..++.||++||+||         |||      +++.+||+|||+|+......  .......||+.|||||+
T Consensus        98 ~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~  177 (276)
T d1uwha_          98 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV  177 (276)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHH
Confidence            35699999999999999999999         777      55778999999998764322  22334578999999999


Q ss_pred             hcCC--CCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          72 LLGS--QRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        72 ~~~~--~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      +...  ..++.++||||+||++|+|++|+.||.+.+...............+.                       ....
T Consensus       178 l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~-----------------------~~~~  234 (276)
T d1uwha_         178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD-----------------------LSKV  234 (276)
T ss_dssp             HTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC-----------------------GGGS
T ss_pred             HhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc-----------------------chhc
Confidence            9642  34789999999999999999999999987766555444332111110                       1122


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ...++..+.+|+.+||+.||++|||+++++++
T Consensus       235 ~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         235 RSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            24578899999999999999999999999976

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=197.78  Aligned_cols=156  Identities=24%  Similarity=0.337  Sum_probs=119.1

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCC-ccccccceeccceeCchh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVP-VRIYTHEVVTLWYRAPEV   71 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~-~~~~~~~~~~~~y~aPE~   71 (197)
                      ..+.+++..++.++.||+.||+||         |||      .++.+||+|||+++..... ........+++.|++||.
T Consensus       122 ~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~  201 (322)
T d1vzoa_         122 QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI  201 (322)
T ss_dssp             HHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHH
T ss_pred             hcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHH
Confidence            345789999999999999999999         777      5578899999999876442 233445678999999999


Q ss_pred             hcCCC-CCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQ-RYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~-~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. .++.++||||+||++|+|++|..||.+....+....+.........                         ...
T Consensus       202 ~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~-------------------------~~~  256 (322)
T d1vzoa_         202 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP-------------------------PYP  256 (322)
T ss_dssp             HTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC-------------------------CCC
T ss_pred             hhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCC-------------------------CCc
Confidence            97543 4788999999999999999999999876544333333221111000                         111


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCC-----CHHHHhcCcccCCCC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRI-----NAENALKHKYFADKT  188 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~-----s~~ell~hp~~~~~~  188 (197)
                      ..++.++.+||.+||+.||.+||     |++|+++||||++..
T Consensus       257 ~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         257 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             ccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCC
Confidence            34789999999999999999999     589999999998753

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-31  Score=196.96  Aligned_cols=144  Identities=17%  Similarity=0.227  Sum_probs=114.8

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      ..+++..++.++.|+++||+||         |||      .++.+||+|||+|+......  .......+|+.|||||++
T Consensus       159 ~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l  238 (325)
T d1rjba_         159 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL  238 (325)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHH
Confidence            3589999999999999999999         888      55778999999998654432  223355789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|+|++ |..||.+.+....+.++......+                           ....
T Consensus       239 ~~~~-~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~---------------------------~~p~  290 (325)
T d1rjba_         239 FEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKM---------------------------DQPF  290 (325)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCC---------------------------CCCT
T ss_pred             cCCC-CCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC---------------------------CCCC
Confidence            8755 8999999999999999997 899998877666665554421111                           0113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      .++.++.+||.+||+.||++|||++||++|
T Consensus       291 ~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         291 YATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            477899999999999999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-30  Score=187.53  Aligned_cols=146  Identities=18%  Similarity=0.188  Sum_probs=118.7

Q ss_pred             HhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCch
Q psy6390           7 LEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPE   70 (197)
Q Consensus         7 ~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE   70 (197)
                      .....+++..+.+++.|+++||+||         |||      +++.+||+|||+|+....... ......+|+.|+|||
T Consensus        92 ~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE  171 (258)
T d1k2pa_          92 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE  171 (258)
T ss_dssp             SGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHH
T ss_pred             ccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcH
Confidence            3456799999999999999999999         666      567889999999986644322 233457899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      .+.+.. ++.++||||+||++|+|++ |+.||.+.+..+....+......+.                            
T Consensus       172 ~~~~~~-~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------  222 (258)
T d1k2pa_         172 VLMYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------------------------  222 (258)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC----------------------------
T ss_pred             HhcCCC-CCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----------------------------
Confidence            998755 8999999999999999998 8999999988877777654221111                            


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ....+..+.+|+.+||+.||++|||++++++|
T Consensus       223 p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         223 PHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            13366789999999999999999999999987

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-31  Score=193.47  Aligned_cols=148  Identities=18%  Similarity=0.224  Sum_probs=118.9

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE   70 (197)
                      ...+++..+..++.|+++||+||         |||      +++.+||+|||+|+.......   ......+|+.|+|||
T Consensus       103 ~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE  182 (285)
T d1u59a_         103 REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE  182 (285)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChH
Confidence            35699999999999999999999         777      557789999999987654322   122446789999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      ++.+.. ++.++||||+||++||+++ |..||.+.+..+....+......                            ..
T Consensus       183 ~~~~~~-~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~----------------------------~~  233 (285)
T d1u59a_         183 CINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM----------------------------EC  233 (285)
T ss_dssp             HHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC----------------------------CC
T ss_pred             HHhCCC-CCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CC
Confidence            997654 8999999999999999998 89999988877776666432111                            11


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHH---hcCcccC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENA---LKHKYFA  185 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~el---l~hp~~~  185 (197)
                      .+.++.++.+|+.+||+.||++|||+.++   |+|+|+.
T Consensus       234 p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         234 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            14478899999999999999999999887   6788874

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.4e-31  Score=192.29  Aligned_cols=146  Identities=18%  Similarity=0.251  Sum_probs=115.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCchh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAPEV   71 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aPE~   71 (197)
                      ..+++..+..++.||+.||+||         |||      +++.+||+|||+|+.......   ......||+.|+|||.
T Consensus       102 ~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~  181 (277)
T d1xbba_         102 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC  181 (277)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchh
Confidence            5699999999999999999999         888      446789999999987654322   2233467899999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++||||+||++|++++ |..||.+.+..+....+......                            ...
T Consensus       182 l~~~~-~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~----------------------------~~p  232 (277)
T d1xbba_         182 INYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM----------------------------GCP  232 (277)
T ss_dssp             HHHCE-EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC----------------------------CCC
T ss_pred             hcCCC-CCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCC
Confidence            98755 8899999999999999997 89999998877666655432111                            011


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHH---hcCccc
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENA---LKHKYF  184 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~el---l~hp~~  184 (197)
                      ..++.++.+|+.+||+.||++|||++++   |+|+|+
T Consensus       233 ~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         233 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence            3467899999999999999999999998   456665

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.6e-31  Score=189.25  Aligned_cols=146  Identities=17%  Similarity=0.200  Sum_probs=107.0

Q ss_pred             HhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCch
Q psy6390           7 LEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPE   70 (197)
Q Consensus         7 ~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE   70 (197)
                      .....+++..+..++.|+++||+||         |||      +++.+||+|||+|+....... ......||+.|+|||
T Consensus        93 ~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE  172 (263)
T d1sm2a_          93 TQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE  172 (263)
T ss_dssp             TTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHH
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChH
Confidence            3445689999999999999999999         777      457789999999987654322 233457899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKH  149 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (197)
                      ++.+.. ++.++||||+||++|++++ |.+|+...+.......+........                            
T Consensus       173 ~l~~~~-~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~----------------------------  223 (263)
T d1sm2a_         173 VFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK----------------------------  223 (263)
T ss_dssp             HHTTCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC----------------------------
T ss_pred             HhcCCC-CCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC----------------------------
Confidence            998755 8999999999999999998 6777877777777666654221110                            


Q ss_pred             cCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         150 VKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       150 ~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ....+..+.+|+.+||+.||++|||++|+++|
T Consensus       224 p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         224 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            13357889999999999999999999999976

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.3e-30  Score=191.09  Aligned_cols=145  Identities=17%  Similarity=0.176  Sum_probs=107.3

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccc-----cccceecccee
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRI-----YTHEVVTLWYR   67 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~-----~~~~~~~~~y~   67 (197)
                      ....+++.++..++.||++||+||         |||      +++.+||+|||+|+........     .....+|+.||
T Consensus       121 ~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~  200 (299)
T d1jpaa_         121 NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT  200 (299)
T ss_dssp             TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGS
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCcccc
Confidence            345699999999999999999999         777      5678999999999876543221     12245689999


Q ss_pred             CchhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhh
Q psy6390          68 APEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCL  146 (197)
Q Consensus        68 aPE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (197)
                      |||.+.+.. ++.++||||+||++|+|++ |..||.+....+....+......+.                         
T Consensus       201 aPE~~~~~~-~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------  254 (299)
T d1jpaa_         201 APEAIQYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP-------------------------  254 (299)
T ss_dssp             CHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC-------------------------
T ss_pred             CHHHHhcCC-CCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------------
Confidence            999998754 8999999999999999998 8999999888877777654322111                         


Q ss_pred             hhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         147 DKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       147 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                         ...++..+.+|+.+||+.||++|||++|++++
T Consensus       255 ---~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         255 ---PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             ---CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ---CccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence               13467899999999999999999999998764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.7e-31  Score=191.15  Aligned_cols=148  Identities=18%  Similarity=0.262  Sum_probs=118.6

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~   73 (197)
                      .++++..+..++.||++||.||         |||      +++.+||+|||+|+...... .......+|+.|+|||++.
T Consensus       104 ~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~  183 (272)
T d1qpca_         104 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN  183 (272)
T ss_dssp             HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHh
Confidence            4599999999999999999999         777      55788999999998775433 2334457889999999997


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++|+|++ |.+|+......+....+......+                            ....
T Consensus       184 ~~~-~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~----------------------------~p~~  234 (272)
T d1qpca_         184 YGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV----------------------------RPDN  234 (272)
T ss_dssp             HCE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC----------------------------CCTT
T ss_pred             CCC-CCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC----------------------------Cccc
Confidence            654 8899999999999999999 566677777766666664421111                            1134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc--CcccCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK--HKYFAD  186 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~--hp~~~~  186 (197)
                      ++..+.+|+.+||+.||++|||++++++  |+||.+
T Consensus       235 ~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            6789999999999999999999999998  788853

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.2e-31  Score=189.83  Aligned_cols=145  Identities=21%  Similarity=0.221  Sum_probs=107.2

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc-ccccceeccceeCchh
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR-IYTHEVVTLWYRAPEV   71 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~-~~~~~~~~~~y~aPE~   71 (197)
                      ....+++..++.++.||++||+||         |||      +++.+||+|||+|+....... ......+|+.|+|||.
T Consensus       101 ~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~  180 (273)
T d1mp8a_         101 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES  180 (273)
T ss_dssp             TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhH
Confidence            345699999999999999999999         777      446789999999987654322 2334567899999999


Q ss_pred             hcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          72 LLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        72 ~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      +.+.. ++.++||||+||++|+|++ |..||...+..+....+......                            ..+
T Consensus       181 l~~~~-~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~----------------------------~~~  231 (273)
T d1mp8a_         181 INFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL----------------------------PMP  231 (273)
T ss_dssp             HHHCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC----------------------------CCC
T ss_pred             hccCC-CCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCC
Confidence            98645 8999999999999999998 89999988887777766542111                            111


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +.++..+.+||.+||+.||++|||++|+++|
T Consensus       232 ~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         232 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            4578899999999999999999999999876

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.6e-30  Score=194.47  Aligned_cols=182  Identities=26%  Similarity=0.402  Sum_probs=125.5

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc----------ccCCCCc------------EEEeecCCccccCCCccccccceeccc
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC----------IKPKSNI------------VKVADFGLARAFGVPVRIYTHEVVTLW   65 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l----------lkp~~~~------------vkl~Dfg~s~~~~~~~~~~~~~~~~~~   65 (197)
                      ....+++..++.++.|+++||+||          |||+|..            ++++|||.|......   .....+|+.
T Consensus       118 ~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~---~~~~~gt~~  194 (362)
T d1q8ya_         118 EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH---YTNSIQTRE  194 (362)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC---CCSCCSCGG
T ss_pred             cccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccc---ccccccccc
Confidence            345799999999999999999999          8886633            689999999765432   234578999


Q ss_pred             eeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC------hHHHHHHHHhhcCCCCCCCCCCCCC---------
Q psy6390          66 YRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS------EIDQLFRIFRVLTTPTEDNWPGVSK---------  130 (197)
Q Consensus        66 y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---------  130 (197)
                      |+|||++.... ++.++|+||+||++++|++|+.||....      ..+.+......++.++.........         
T Consensus       195 y~aPE~~~~~~-~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  273 (362)
T d1q8ya_         195 YRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG  273 (362)
T ss_dssp             GCCHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--
T ss_pred             ccChhhccccC-CCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccch
Confidence            99999998754 8999999999999999999999997543      3445566666666544321111000         


Q ss_pred             CCCCCCCCcc--cchhh--hhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccCCCCCcchh
Q psy6390         131 LPDYKTTFPE--WSNFC--LDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKHKYFADKTDLPKF  193 (197)
Q Consensus       131 ~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~~~~~~~~~  193 (197)
                      ..........  +....  ........+..+.|||.+||..||++||||+|+|+||||++....+++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~~~~  340 (362)
T d1q8ya_         274 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI  340 (362)
T ss_dssp             CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCTTC
T ss_pred             hhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCCCcccC
Confidence            0000000000  00000  011112346789999999999999999999999999999977655543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.1e-30  Score=187.06  Aligned_cols=152  Identities=21%  Similarity=0.283  Sum_probs=114.8

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhh
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~   72 (197)
                      ...+++.++..++.||+.||+||         |||      +++.+||+|||+|+...... .......+|+.|+|||.+
T Consensus       107 ~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~  186 (285)
T d1fmka3         107 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA  186 (285)
T ss_dssp             HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHH
T ss_pred             cccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHH
Confidence            34699999999999999999999         777      45778999999998764332 223345789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|+|++| .+++......+.+..+......+                            ...
T Consensus       187 ~~~~-~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~----------------------------~~~  237 (285)
T d1fmka3         187 LYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP----------------------------CPP  237 (285)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC----------------------------CCT
T ss_pred             hCCC-CCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC----------------------------CCc
Confidence            8755 89999999999999999994 56666677666666665422111                            114


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc--CcccCCCCC
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK--HKYFADKTD  189 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~--hp~~~~~~~  189 (197)
                      .+++.+.++|.+||+.||++|||++++++  |+||....+
T Consensus       238 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p  277 (285)
T d1fmka3         238 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  277 (285)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred             ccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCC
Confidence            47789999999999999999999999988  899976543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-30  Score=190.58  Aligned_cols=143  Identities=20%  Similarity=0.248  Sum_probs=106.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++.++..++.||++||+||         |||      +++.+||+|||+|+......  .......||+.|+|||++.
T Consensus       130 ~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~  209 (299)
T d1ywna1         130 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  209 (299)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhh
Confidence            489999999999999999999         888      44678999999998654322  2233457899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++|+|+++ ..||.+......+.........+                           .....
T Consensus       210 ~~~-~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~  261 (299)
T d1ywna1         210 DRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM---------------------------RAPDY  261 (299)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCC---------------------------CCCTT
T ss_pred             cCC-CCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC---------------------------CCCcc
Confidence            755 89999999999999999985 57887766555444433321111                           01134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ++.++.+++.+||+.||++|||++|+++|
T Consensus       262 ~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         262 TTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            67899999999999999999999999987

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=6.8e-30  Score=186.26  Aligned_cols=142  Identities=20%  Similarity=0.253  Sum_probs=110.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc-cccccceeccceeCchhhc
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV-RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~-~~~~~~~~~~~y~aPE~~~   73 (197)
                      ..+++..+..++.||++||+||         |||      +++.+||+|||+|+...... .......+++.|+|||++.
T Consensus       110 ~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~  189 (287)
T d1opja_         110 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA  189 (287)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHc
Confidence            4689999999999999999999         777      44678999999998765433 2334456899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhCCCCC-CCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATRKPLF-QGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++|+|++|..|+ .+.+.......+......                            .....
T Consensus       190 ~~~-~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~----------------------------~~~~~  240 (287)
T d1opja_         190 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM----------------------------ERPEG  240 (287)
T ss_dssp             HCC-CSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC----------------------------CCCTT
T ss_pred             CCC-CCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCC----------------------------CCCcc
Confidence            755 899999999999999999966554 444444443333221100                            11144


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ++..+.+|+.+||+.||++|||++|+++
T Consensus       241 ~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         241 CPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            7889999999999999999999999975

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.1e-30  Score=190.69  Aligned_cols=146  Identities=18%  Similarity=0.205  Sum_probs=114.2

Q ss_pred             HhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCc
Q psy6390           7 LEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAP   69 (197)
Q Consensus         7 ~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aP   69 (197)
                      .....+++..+..++.||++||+||         |||      +++++||+|||+|+.......  ......||+.|+||
T Consensus       103 ~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~AP  182 (317)
T d1xkka_         103 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL  182 (317)
T ss_dssp             HTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCH
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccCh
Confidence            3446799999999999999999999         788      446789999999987644322  22334679999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      |++.+.. ++.++||||+||++|+|++ |..||.+.+..+....+......+                            
T Consensus       183 E~l~~~~-~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~----------------------------  233 (317)
T d1xkka_         183 ESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP----------------------------  233 (317)
T ss_dssp             HHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCC----------------------------
T ss_pred             HHHhcCC-CChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------
Confidence            9998755 8999999999999999998 899998877666555554321111                            


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      ..+.++..+.+|+.+||+.||++|||+.|+++|
T Consensus       234 ~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         234 QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence            113467899999999999999999999999887

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.2e-29  Score=182.49  Aligned_cols=144  Identities=17%  Similarity=0.214  Sum_probs=105.2

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeCc
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRAP   69 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~aP   69 (197)
                      ....+++.++..++.|++.||+||         |||      +++.+||+|||+|+.......   ......||+.|+||
T Consensus       103 ~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~AP  182 (283)
T d1mqba_         103 KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP  182 (283)
T ss_dssp             TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCH
T ss_pred             ccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCH
Confidence            445799999999999999999999         777      567889999999987644221   22334678999999


Q ss_pred             hhhcCCCCCCCchhhhhhhHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhh
Q psy6390          70 EVLLGSQRYSCPVDVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDK  148 (197)
Q Consensus        70 E~~~~~~~~~~~~Diws~g~~l~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (197)
                      |++.+.. ++.++||||+||++|+|+++ .+++...+..+....+......+                            
T Consensus       183 E~l~~~~-~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~----------------------------  233 (283)
T d1mqba_         183 EAISYRK-FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP----------------------------  233 (283)
T ss_dssp             HHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC----------------------------
T ss_pred             HHHccCC-CCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCC----------------------------
Confidence            9998755 89999999999999999995 55555566655555554321111                            


Q ss_pred             ccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         149 HVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       149 ~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      ....++..+.+|+.+||+.||++|||+.|+++
T Consensus       234 ~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         234 TPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            11336688999999999999999999999876

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=1.4e-29  Score=183.89  Aligned_cols=151  Identities=26%  Similarity=0.358  Sum_probs=111.7

Q ss_pred             hhcCCHHHHHHHHHHHHhhhccc---------ccCCC------CcEEEeecCCccccCCCc---cccccceeccceeCch
Q psy6390           9 WEQVGTYQVKITTRLFLQATSFC---------IKPKS------NIVKVADFGLARAFGVPV---RIYTHEVVTLWYRAPE   70 (197)
Q Consensus         9 ~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~------~~vkl~Dfg~s~~~~~~~---~~~~~~~~~~~y~aPE   70 (197)
                      ..++++.+++.++.||++||+||         |||+|      +.++++|||.+.......   ......+||+.|+|||
T Consensus       105 ~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE  184 (277)
T d1o6ya_         105 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE  184 (277)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHH
Confidence            35799999999999999999999         88844      567899999987654322   2234557899999999


Q ss_pred             hhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhcc
Q psy6390          71 VLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHV  150 (197)
Q Consensus        71 ~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (197)
                      ++.+.. ++.++||||+||++|+|++|..||.+.+..+....+......++                         ....
T Consensus       185 ~~~~~~-~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~-------------------------~~~~  238 (277)
T d1o6ya_         185 QARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP-------------------------SARH  238 (277)
T ss_dssp             HHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCG-------------------------GGTS
T ss_pred             HHcCCC-CCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCC-------------------------chhc
Confidence            997644 89999999999999999999999999888877766654322111                         1122


Q ss_pred             CCCCHhHHHHHHhhcccCCCCCCCHHHHhcCcccC
Q psy6390         151 KNLDQDGLDLLEKTLIYCPATRINAENALKHKYFA  185 (197)
Q Consensus       151 ~~~~~~~~~li~~~l~~~p~~R~s~~ell~hp~~~  185 (197)
                      ..+|..+.++|.+||+.||++||+..+.+.|+|.+
T Consensus       239 ~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         239 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             SSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            55789999999999999999999544455577654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.9e-29  Score=181.03  Aligned_cols=145  Identities=19%  Similarity=0.202  Sum_probs=114.9

Q ss_pred             HhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc---ccccceeccceeC
Q psy6390           7 LEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR---IYTHEVVTLWYRA   68 (197)
Q Consensus         7 ~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~---~~~~~~~~~~y~a   68 (197)
                      .....+++..+..++.||+.||.||         |||      .++.+||+|||+++.......   ......++..|+|
T Consensus       103 ~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~a  182 (273)
T d1u46a_         103 KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA  182 (273)
T ss_dssp             HHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCC
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCC
Confidence            3446799999999999999999999         777      446689999999987654322   2233456889999


Q ss_pred             chhhcCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhh
Q psy6390          69 PEVLLGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLD  147 (197)
Q Consensus        69 PE~~~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (197)
                      ||.+.+.. ++.++||||+||++|+|++ |..||.+.+..+....+.+....+                           
T Consensus       183 PE~~~~~~-~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~---------------------------  234 (273)
T d1u46a_         183 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL---------------------------  234 (273)
T ss_dssp             HHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC---------------------------
T ss_pred             HHHHhCCC-CCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCC---------------------------
Confidence            99998754 8899999999999999997 899999998888887775432111                           


Q ss_pred             hccCCCCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         148 KHVKNLDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       148 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                      .....++..+.+|+.+||+.||++|||+.+|+
T Consensus       235 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~  266 (273)
T d1u46a_         235 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR  266 (273)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCcccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            11144778999999999999999999999986

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=7.6e-29  Score=181.99  Aligned_cols=142  Identities=17%  Similarity=0.266  Sum_probs=112.4

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      ..++...+..++.|++.||+||         |||      .++.+||+|||+|+...+..  .......+++.|+|||.+
T Consensus       135 ~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~  214 (301)
T d1lufa_         135 PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI  214 (301)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHH
Confidence            3589999999999999999999         777      45678999999998654322  222345678999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHhCC-CCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|+|++|. .||.+.+..+....+......                            ....
T Consensus       215 ~~~~-~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~----------------------------~~p~  265 (301)
T d1lufa_         215 FYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL----------------------------ACPE  265 (301)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC----------------------------CCCT
T ss_pred             ccCC-CChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCc
Confidence            8755 899999999999999999974 688888888777776542111                            1114


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .++.++.+|+.+||+.||++|||+.||++
T Consensus       266 ~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         266 NCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            57789999999999999999999999963

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.2e-28  Score=178.47  Aligned_cols=142  Identities=20%  Similarity=0.284  Sum_probs=113.9

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhh
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVL   72 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~   72 (197)
                      .++++.++..++.||++||+||         |||      .++.+||+|||.++......  .......+++.|+|||.+
T Consensus       130 ~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l  209 (299)
T d1fgka_         130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL  209 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHh
Confidence            4699999999999999999999         777      45678999999998664322  223345789999999999


Q ss_pred             cCCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccC
Q psy6390          73 LGSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVK  151 (197)
Q Consensus        73 ~~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (197)
                      .+.. ++.++||||+||++|+|++ |..||.+.+.......+......+                            ...
T Consensus       210 ~~~~-y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~----------------------------~p~  260 (299)
T d1fgka_         210 FDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD----------------------------KPS  260 (299)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC----------------------------CCS
T ss_pred             cCCC-CCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CCc
Confidence            8744 9999999999999999998 789998888776665554321111                            113


Q ss_pred             CCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         152 NLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       152 ~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .++..+.+||.+||+.||++|||+.|+++
T Consensus       261 ~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         261 NCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             SCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            46789999999999999999999999985

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.1e-28  Score=176.01  Aligned_cols=140  Identities=18%  Similarity=0.221  Sum_probs=107.3

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..++.++.||++||+||         |||      .++.+||+|||.++......   ....++..|+|||.+.+
T Consensus        98 ~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~---~~~~~~~~y~aPE~l~~  174 (262)
T d1byga_          98 SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALRE  174 (262)
T ss_dssp             HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------------CCTTTSCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCC---ccccccccCCChHHHhC
Confidence            4599999999999999999999         666      56788999999998654432   23467889999999987


Q ss_pred             CCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++||||+||++|+|++ |..||...+..+....+......                            ......
T Consensus       175 ~~-~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~----------------------------~~~~~~  225 (262)
T d1byga_         175 KK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM----------------------------DAPDGC  225 (262)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC----------------------------CCCTTC
T ss_pred             CC-CChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCccC
Confidence            54 8999999999999999998 78999888777776666431111                            111346


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +..+.+|+.+||+.||++|||+.+++++
T Consensus       226 ~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         226 PPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            7899999999999999999999999863

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.7e-28  Score=178.21  Aligned_cols=147  Identities=19%  Similarity=0.234  Sum_probs=117.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc--ccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR--IYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~--~~~~~~~~~~y~aPE~~~   73 (197)
                      .++...+.+++.|+++||.||         |||      +++++||+|||+|+.......  ......+|+.|+|||.+.
T Consensus       129 ~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~  208 (308)
T d1p4oa_         129 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK  208 (308)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHc
Confidence            478899999999999999999         666      567899999999986644322  223346899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIATR-KPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++|+|++| ..||.+.+....+..+.+....                            .....
T Consensus       209 ~~~-~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~----------------------------~~p~~  259 (308)
T d1p4oa_         209 DGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL----------------------------DKPDN  259 (308)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCC----------------------------CCCTT
T ss_pred             cCC-CCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCC----------------------------CCccc
Confidence            755 88999999999999999997 5888888888877776542111                            01134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc------CcccCC
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK------HKYFAD  186 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~------hp~~~~  186 (197)
                      ++..+.++|.+||+.||++|||++++++      +|+|++
T Consensus       260 ~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         260 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             chHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence            6789999999999999999999999987      677754

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=9.4e-29  Score=181.42  Aligned_cols=158  Identities=14%  Similarity=0.115  Sum_probs=115.3

Q ss_pred             hhhcCCHHHHHHHHHHHHhhhccc---------ccCCCC---------cEEEeecCCccccCCCcc-------cccccee
Q psy6390           8 EWEQVGTYQVKITTRLFLQATSFC---------IKPKSN---------IVKVADFGLARAFGVPVR-------IYTHEVV   62 (197)
Q Consensus         8 ~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~~---------~vkl~Dfg~s~~~~~~~~-------~~~~~~~   62 (197)
                      ..+.+++..+..++.|++.||+||         |||+|.         .++|+|||+|+.......       ......|
T Consensus        96 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~g  175 (299)
T d1ckia_          96 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTG  175 (299)
T ss_dssp             TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCC
T ss_pred             ccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCC
Confidence            346799999999999999999999         888653         589999999987643221       2234578


Q ss_pred             ccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy6390          63 TLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWS  142 (197)
Q Consensus        63 ~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (197)
                      |+.|+|||.+.+.. ++.++||||+||++|+|++|..||...........+......                     ..
T Consensus       176 t~~y~aPE~~~~~~-~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~---------------------~~  233 (299)
T d1ckia_         176 TARYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK---------------------KM  233 (299)
T ss_dssp             CSSSCCHHHHTTBC-CCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHH---------------------HH
T ss_pred             CccccCHHHHhCCC-CCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcc---------------------cC
Confidence            99999999998755 899999999999999999999999876544333222111000                     00


Q ss_pred             hhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHH---HhcCcccCCC
Q psy6390         143 NFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAEN---ALKHKYFADK  187 (197)
Q Consensus       143 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~e---ll~hp~~~~~  187 (197)
                      ..........++.++.+++.+||..||++||++++   +++|+|.+..
T Consensus       234 ~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~  281 (299)
T d1ckia_         234 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  281 (299)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             CCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcC
Confidence            00112223568899999999999999999999874   5788876543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.7e-28  Score=178.91  Aligned_cols=142  Identities=22%  Similarity=0.258  Sum_probs=111.0

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCC------CCcEEEeecCCccccCCCccccccceeccceeCchhhcC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPK------SNIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLG   74 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~------~~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~   74 (197)
                      ..+++..+..++.||+.||.||         |||+      ++.+||+|||+|+....... .....+|..|+|||.+.+
T Consensus       122 ~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~-~~~~~gt~~y~aPE~l~~  200 (309)
T d1fvra_         122 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNY  200 (309)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECC-C----CCTTTCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEcccccccccccccc-ccceecCCcccchHHhcc
Confidence            4699999999999999999999         7774      45679999999976543222 224467999999999977


Q ss_pred             CCCCCCchhhhhhhHHHHHHHhCC-CCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCCC
Q psy6390          75 SQRYSCPVDVWSIGCIFAEIATRK-PLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKNL  153 (197)
Q Consensus        75 ~~~~~~~~Diws~g~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (197)
                      .. ++.++||||+||++|+|++|. +||.+.+..+....+.+....                            .....+
T Consensus       201 ~~-~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~----------------------------~~~~~~  251 (309)
T d1fvra_         201 SV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL----------------------------EKPLNC  251 (309)
T ss_dssp             CE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCC----------------------------CCCTTB
T ss_pred             CC-CCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCC----------------------------CCCccC
Confidence            55 899999999999999999964 678887777766665431110                            111346


Q ss_pred             CHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         154 DQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       154 ~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                      +.++.+||.+||+.||++|||++|+++|
T Consensus       252 ~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         252 DDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            7899999999999999999999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.6e-27  Score=173.69  Aligned_cols=142  Identities=16%  Similarity=0.266  Sum_probs=112.8

Q ss_pred             cCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCc--cccccceeccceeCchhhc
Q psy6390          11 QVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPV--RIYTHEVVTLWYRAPEVLL   73 (197)
Q Consensus        11 ~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~--~~~~~~~~~~~y~aPE~~~   73 (197)
                      .+++..+..++.||++||+||         |||      .++.++++|||.++......  .......+|+.|+|||.+.
T Consensus       141 ~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  220 (311)
T d1t46a_         141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhc
Confidence            599999999999999999999         777      44667999999998765432  2334567899999999998


Q ss_pred             CCCCCCCchhhhhhhHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchhhhhhccCC
Q psy6390          74 GSQRYSCPVDVWSIGCIFAEIAT-RKPLFQGDSEIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNFCLDKHVKN  152 (197)
Q Consensus        74 ~~~~~~~~~Diws~g~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (197)
                      +.. ++.++||||+||++|+|++ |.+++...+....+.++......+.                           ....
T Consensus       221 ~~~-~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~---------------------------~~~~  272 (311)
T d1t46a_         221 NCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML---------------------------SPEH  272 (311)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC---------------------------CCTT
T ss_pred             CCC-CCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC---------------------------Cccc
Confidence            644 8999999999999999998 6777777766666655544211111                           1134


Q ss_pred             CCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         153 LDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       153 ~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                      .+..+.+||.+||+.||++|||+++|++
T Consensus       273 ~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         273 APAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            6789999999999999999999999885

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.6e-27  Score=174.30  Aligned_cols=148  Identities=20%  Similarity=0.144  Sum_probs=109.7

Q ss_pred             HHHhhhcCCHHHHHHHHHHHHhhhccc---------ccC------CCCcEEEeecCCccccCCCcc----ccccceeccc
Q psy6390           5 IQLEWEQVGTYQVKITTRLFLQATSFC---------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVVTLW   65 (197)
Q Consensus         5 ~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~~~~   65 (197)
                      ++.....+++..+..++.|++.||.||         |||      +++.+||+|||+++.......    ......||..
T Consensus       120 ~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~  199 (311)
T d1r0pa_         120 IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK  199 (311)
T ss_dssp             HHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGG
T ss_pred             hccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceeccccccccc
Confidence            333445688889999999999999999         666      667889999999987643221    2223467999


Q ss_pred             eeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccchh
Q psy6390          66 YRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDS-EIDQLFRIFRVLTTPTEDNWPGVSKLPDYKTTFPEWSNF  144 (197)
Q Consensus        66 y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (197)
                      |+|||.+.+.. ++.++||||+|+++|++++|..||.... ..+....+.......                        
T Consensus       200 y~aPE~~~~~~-~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~------------------------  254 (311)
T d1r0pa_         200 WMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL------------------------  254 (311)
T ss_dssp             GSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCC------------------------
T ss_pred             ccChHHHhcCC-CCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC------------------------
Confidence            99999998755 8999999999999999999766665443 333334433211110                        


Q ss_pred             hhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhcC
Q psy6390         145 CLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALKH  181 (197)
Q Consensus       145 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~h  181 (197)
                          ....++..+.+|+.+||+.||++|||+.|+++|
T Consensus       255 ----~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         255 ----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                113467899999999999999999999999987

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.92  E-value=4.3e-25  Score=161.22  Aligned_cols=151  Identities=19%  Similarity=0.197  Sum_probs=112.0

Q ss_pred             hHHHhhhcCCHHHHHHHHHHHHhhhccc---------ccCCC-----------CcEEEeecCCccccCCCc-------cc
Q psy6390           4 LIQLEWEQVGTYQVKITTRLFLQATSFC---------IKPKS-----------NIVKVADFGLARAFGVPV-------RI   56 (197)
Q Consensus         4 ~~~~~~~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-----------~~vkl~Dfg~s~~~~~~~-------~~   56 (197)
                      +++.....+++.++..++.|++.||+||         |||+|           +.++|+|||+|+......       ..
T Consensus        90 ~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~  169 (293)
T d1csna_          90 LLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYRE  169 (293)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCC
T ss_pred             HHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecc
Confidence            3334445799999999999999999999         88844           457999999998764321       11


Q ss_pred             cccceeccceeCchhhcCCCCCCCchhhhhhhHHHHHHHhCCCCCCCCCh---HHHHHHHHhhcCCCCCCCCCCCCCCCC
Q psy6390          57 YTHEVVTLWYRAPEVLLGSQRYSCPVDVWSIGCIFAEIATRKPLFQGDSE---IDQLFRIFRVLTTPTEDNWPGVSKLPD  133 (197)
Q Consensus        57 ~~~~~~~~~y~aPE~~~~~~~~~~~~Diws~g~~l~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (197)
                      .....||+.|||||++.+.. ++.++||||+||++|+|++|..||.+...   .....++.......             
T Consensus       170 ~~~~~GT~~y~aPE~~~~~~-~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~-------------  235 (293)
T d1csna_         170 KKNLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST-------------  235 (293)
T ss_dssp             CCCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS-------------
T ss_pred             cCceEEchhhcCHHHhcCCC-CChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC-------------
Confidence            23457899999999998744 89999999999999999999999976432   23333332210000             


Q ss_pred             CCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHh
Q psy6390         134 YKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENAL  179 (197)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell  179 (197)
                                 ..+.....+++++.+++..|+..+|++||+.+.+.
T Consensus       236 -----------~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         236 -----------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             -----------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             -----------ChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence                       01223356788999999999999999999877654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.6e-25  Score=163.03  Aligned_cols=150  Identities=20%  Similarity=0.180  Sum_probs=101.2

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc-----------------ccC------CCCcEEEeecCCccccCCCcc----cccccee
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC-----------------IKP------KSNIVKVADFGLARAFGVPVR----IYTHEVV   62 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l-----------------lkp------~~~~vkl~Dfg~s~~~~~~~~----~~~~~~~   62 (197)
                      .+++......++.|++.||+|+                 |||      +++.+||+|||+++.......    ......|
T Consensus        95 ~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~g  174 (303)
T d1vjya_          95 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG  174 (303)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceec
Confidence            4699999999999999999998                 566      567889999999987644322    2234578


Q ss_pred             ccceeCchhhcCCC-----CCCCchhhhhhhHHHHHHHhCCCCCCCCCh--------------HHHHHHHHhhcCCCCCC
Q psy6390          63 TLWYRAPEVLLGSQ-----RYSCPVDVWSIGCIFAEIATRKPLFQGDSE--------------IDQLFRIFRVLTTPTED  123 (197)
Q Consensus        63 ~~~y~aPE~~~~~~-----~~~~~~Diws~g~~l~~ll~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~  123 (197)
                      |+.|+|||++.+..     .++.++||||+||++|+|++|..|+.....              ..........       
T Consensus       175 t~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  247 (303)
T d1vjya_         175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE-------  247 (303)
T ss_dssp             CGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT-------
T ss_pred             ccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhc-------
Confidence            99999999986532     145689999999999999999877643211              1111111100       


Q ss_pred             CCCCCCCCCCCCCCCcccchhhhhhccCCCCHhHHHHHHhhcccCCCCCCCHHHHhc
Q psy6390         124 NWPGVSKLPDYKTTFPEWSNFCLDKHVKNLDQDGLDLLEKTLIYCPATRINAENALK  180 (197)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~ell~  180 (197)
                              ....+.++..      .........+.+|+.+||+.||++|||+.|+++
T Consensus       248 --------~~~~p~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         248 --------QKLRPNIPNR------WQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             --------SCCCCCCCGG------GGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             --------cccCCCCCcc------cCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence                    0000000000      000112346889999999999999999999976

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.02  E-value=0.00013  Score=48.14  Aligned_cols=76  Identities=11%  Similarity=-0.014  Sum_probs=47.7

Q ss_pred             hcCCHHHHHHHHHHHHhhhccc---------ccCCC-----CcEEEeecCCccccCCCccccccceeccceeCchhhcCC
Q psy6390          10 EQVGTYQVKITTRLFLQATSFC---------IKPKS-----NIVKVADFGLARAFGVPVRIYTHEVVTLWYRAPEVLLGS   75 (197)
Q Consensus        10 ~~l~~~~~~~~~~qi~~~l~~l---------lkp~~-----~~vkl~Dfg~s~~~~~~~~~~~~~~~~~~y~aPE~~~~~   75 (197)
                      +.+++..+..++.|++.|++||         |||+|     ..++|+|||.|.....+...... ...... -.+-+ . 
T Consensus        98 ~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~~~liDFG~a~~~~~~~~~~~l-~rd~~~-~~~~f-~-  173 (191)
T d1zara2          98 YRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEGIWIIDFPQSVEVGEEGWREIL-ERDVRN-IITYF-S-  173 (191)
T ss_dssp             GGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTEEEECCCTTCEETTSTTHHHHH-HHHHHH-HHHHH-H-
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCCEEEEECCCcccCCCCCcHHHH-HHHHHH-HHHHH-c-
Confidence            3477788889999999999999         99955     44689999999766533211100 000000 00111 1 


Q ss_pred             CCCCCchhhhhhhH
Q psy6390          76 QRYSCPVDVWSIGC   89 (197)
Q Consensus        76 ~~~~~~~Diws~g~   89 (197)
                      +.++.++|+||+.-
T Consensus       174 r~y~~~~d~~s~~~  187 (191)
T d1zara2         174 RTYRTEKDINSAID  187 (191)
T ss_dssp             HHHCCCCCHHHHHH
T ss_pred             CCCCCcccHHHHHH
Confidence            33778899999653