Diaphorina citri psyllid: psy6476


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540------
MTSSDGLPHFPPPMIQDNVNGWGPCDMPQQFKDMPYQPFSKGDRLGKISDWTGLAFQDKKYINKYQSQFGSGSQYAYYHEEDESTFHLVDTTRIQKPPYQRGRNMRGRGGGRGGAQAQFQLLGKGFKLRDRDRKGQSGAKRYGKTQNIRNNKNQAPIKNRDASVTVRSDWVTIEEMDFARFSKLSLPNVKEPQDLYCCGSVEFYDKSYDRVNCKNEKPLVSNERIFHTVTTTDDPIIRKLSKTEGNVYATDTILATLMCCTRSNYSWDIVIEKIGDKLFFDKRDNTEFDLLTVNETSQDPPSDEQTSINSPRNLALEATFINHNFSQQVLKSGDARHSFDNPNPFISEEEEEEGEVASVAYKYRKWDLGEGIGLVARCEHDGVLASPNGDLQFLNIKALNEWDSKLSGGVEWRQKLDVQRGAVLANELRNNSCKLAKWTVQALLAGSAQIKFGYVSRAQVRDATRHVILGTQQYKPAEFAGQINLNMDNAWGILRCIIDICLKQKDGKYLIMKDPNKPLIRLYDIPDNTFDSDNEENEDEDGLPNM
ccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccHHHHHHHcccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccEEEEECcccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccHHHHHHHcccccEEEHHHHHHHHHHccccccccEEEEEEEccEEEEEccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHccccccccEEEEEEcccccccEEEEEEEccEEECccccccEEEEEEEEcccccccccccHHHHHHHHHccHHHHHHHHHcHHHHHHHHHHHHHcccccEEEEEEEccccccccccEEEEEEECcHHHHHHHHcccccccHHHHHHHHHHHHHcccccEEEEEcccccEEEEEEcccccccccccccccccccccc
*********FPPPMIQDNVNGWGPCDMPQQFKDMPYQPFSKGDRLGKISDWTGLAFQDKKYINKYQSQFGSGSQYAYYHEEDESTFHLVDT************************************************************************VTVRSDWVTIEEMDFARFSKLSLPNVKEPQDLYCCGSVEFYDKSYDRVNCKNEKPLVSNERIFHTVTTTDDPIIRKLSKTEGNVYATDTILATLMCCTRSNYSWDIVIEKIGDKLFFDKRDNTEFDLLTVNETS************SPRNLALEATFINHNFSQQVLKSG***********************ASVAYKYRKWDLGEGIGLVARCEHDGVLASPNGDLQFLNIKALNEWDSKLSGGVEWRQKLDVQRGAVLANELRNNSCKLAKWTVQALLAGSAQIKFGYVSRAQVRDATRHVILGTQQYKPAEFAGQINLNMDNAWGILRCIIDICLKQKDGKYLIMKDPNKPLIRLYDIPDN******************
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MTSSDGLPHFPPPMIQDNVNGWGPCDMPQQFKDMPYQPFSKGDRLGKISDWTGLAFQDKKYINKYQSQFGSGSQYAYYHEEDESTFHLVDTTRIQKPPYQRGRNMRGRGGGRGGAQAQFQLLGKGFKLRDRDRKGQSGAKRYGKTQNIRNNKNQAPIKNRDASVTVRSDWVTIEEMDFARFSKLSLPNVKEPQDLYCCGSVEFYDKSYDRVNCKNEKPLVSNERIFHTVTTTDDPIIRKLSKTEGNVYATDTILATLMCCTRSNYSWDIVIEKIGDKLFFDKRDNTEFDLLTVNETSQDPPSDEQTSINSPRNLALEATFINHNFSQQVLKSGDARHSFDNPNPFISEEEEEEGEVASVAYKYRKWDLGEGIGLVARCEHDGVLASPNGDLQFLNIKALNEWDSKLSGGVEWRQKLDVQRGAVLANELRNNSCKLAKWTVQALLAGSAQIKFGYVSRAQVRDATRHVILGTQQYKPAEFAGQINLNMDNAWGILRCIIDICLKQKDGKYLIMKDPNKPLIRLYDIPDNTFDSDNEENEDEDGLPNM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Eukaryotic translation initiation factor 3 subunit D Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.very confidentQ7QBW3
Eukaryotic translation initiation factor 3 subunit D Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.very confidentQ6P8G0
Eukaryotic translation initiation factor 3 subunit D Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S preinitiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of posttermination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation.very confidentO15371

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006446 [BP]regulation of translational initiationconfidentGO:0032268, GO:0009889, GO:0080090, GO:0019222, GO:0051246, GO:0060255, GO:0010608, GO:0031323, GO:2000112, GO:0050794, GO:0050789, GO:0010556, GO:0065007, GO:0031326, GO:0006417, GO:0008150, GO:0010468
GO:0005852 [CC]eukaryotic translation initiation factor 3 complexconfidentGO:0043234, GO:0005737, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0003743 [MF]translation initiation factor activityconfidentGO:0097159, GO:0008135, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0001732 [BP]formation of translation initiation complexconfidentGO:0022607, GO:0043933, GO:0044249, GO:0034645, GO:0034622, GO:0044699, GO:0044267, GO:0071826, GO:0044260, GO:0016043, GO:0065003, GO:0071704, GO:0010467, GO:0022618, GO:0071840, GO:0022613, GO:1901576, GO:0009987, GO:0009058, GO:0009059, GO:0044763, GO:0008152, GO:0044238, GO:0019538, GO:0044237, GO:0043170, GO:0044085, GO:0008150, GO:0006413, GO:0006412
GO:0005634 [CC]nucleusconfidentGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0040035 [BP]hermaphrodite genitalia developmentprobableGO:0032502, GO:0007548, GO:0032501, GO:0048608, GO:0000003, GO:0044707, GO:0022414, GO:0061458, GO:0048856, GO:0044767, GO:0003006, GO:0048513, GO:0048806, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0048477 [BP]oogenesisprobableGO:0044702, GO:0048609, GO:0032504, GO:0019953, GO:0007292, GO:0022414, GO:0032501, GO:0008150, GO:0044699, GO:0007276, GO:0000003
GO:0045335 [CC]phagocytic vesicleprobableGO:0005737, GO:0005575, GO:0043231, GO:0016023, GO:0031410, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0030139, GO:0043229, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0031982
GO:0006898 [BP]receptor-mediated endocytosisprobableGO:0006897, GO:0016192, GO:0006810, GO:0008150, GO:0051234, GO:0051179
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0002009 [BP]morphogenesis of an epitheliumprobableGO:0032502, GO:0048856, GO:0060429, GO:0009888, GO:0044767, GO:0008150, GO:0048729, GO:0009653, GO:0044699
GO:0040011 [BP]locomotionprobableGO:0008150
GO:0040010 [BP]positive regulation of growth rateprobableGO:0045927, GO:0040008, GO:0040009, GO:0065007, GO:0048518, GO:0008150, GO:0050789
GO:0071541 [CC]eukaryotic translation initiation factor 3 complex, eIF3mprobableGO:0043234, GO:0005737, GO:0005852, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0032991
GO:0071540 [CC]eukaryotic translation initiation factor 3 complex, eIF3eprobableGO:0043234, GO:0005737, GO:0005852, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0032991
GO:0006915 [BP]apoptotic processprobableGO:0010259, GO:0009987, GO:0012501, GO:0044763, GO:0008150, GO:0007569, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3FQI, chain A
Confidence level:probable
Coverage over the Query: 244-286,298-415,431-528
View the alignment between query and template
View the model in PyMOL