Diaphorina citri psyllid: psy6556


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830------
MDHHQHEEQCMPHESQDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLKHFNSSNSDNIT
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccHHccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHcccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccHHHccccccccccccccccccCEEcccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccHHHHcccccccccccccc
******************RTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLKHFNSSNS*N**
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MDHHQHEEQCMPHESQDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLKHFNSSNSDNIT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Zinc finger protein 850 May be involved in transcriptional regulation.confidentA8MQ14

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0003676 [MF]nucleic acid bindingprobableGO:0097159, GO:0003674, GO:1901363, GO:0005488
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0006355 [BP]regulation of transcription, DNA-dependentprobableGO:0009889, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0019219, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DMD, chain A
Confidence level:very confident
Coverage over the Query: 392-478
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Template: 2DMD, chain A
Confidence level:very confident
Coverage over the Query: 687-773
View the alignment between query and template
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Template: 2CSH, chain A
Confidence level:very confident
Coverage over the Query: 444-531
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Template: 2CSH, chain A
Confidence level:very confident
Coverage over the Query: 711-802
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Template: 2I13, chain A
Confidence level:very confident
Coverage over the Query: 432-530,596-650
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Template: 2GLI, chain A
Confidence level:very confident
Coverage over the Query: 82-106,117-195
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Template: 1TF6, chain A
Confidence level:very confident
Coverage over the Query: 597-770
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Template: 1TF6, chain A
Confidence level:very confident
Coverage over the Query: 692-827
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Template: 2ADR, chain A
Confidence level:very confident
Coverage over the Query: 19-75
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Template: 3HCS, chain A
Confidence level:probable
Coverage over the Query: 250-304
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Template: 1A1I, chain A
Confidence level:probable
Coverage over the Query: 249-328
View the alignment between query and template
View the model in PyMOL