Psyllid ID: psy6556

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830------
Protein Sequence
MDHHQHEEQCMPHESQDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLKHFNSSNSDNIT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccHHccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHcccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccHHHccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHcccccccEcccccccEcccccHHHHHHHcccccccEcccccccEccccHHHHHHHHHcccccccccEcccccccEccccHHHHHHHHccccccccccccccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHEEEEcccccccEcccccccEccccHHHHHHHHccccccccccHcccHHHEEEcccccccEcccccccEccccHHHHHHHHccccccccEcccccccEccccHHHHHHHHcccccccEcccccccEccccHHHHHHHHccccccccHccccEccccHHHHHHHHccccccccccEEcccccccEccccHHHHHEEEcccccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccEccHccccEccccHHHHHHHHccccccccccHccccEccccHHHHHHHHHcccccccccccHccccEccccHHHHHHHHccccccccccHccccEcccccccccccHHHHHHHHcccccccEccHccccEccccHHHHHHHHcccccccEccHccccEcccccHHHHHHHccccccEEEcccccccEEccccHHHHHEEEEcccccccccEcccccccEccccHHHHHHHHcccccccEccHccccEcccccHHHHHHHcccccccccccccccccEccccHHHHHHHHcccccccEEEEcccccccEccccHHHHHHHHccccEEccHccccEccccHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
mdhhqheeqcmphesqdertyhcplcskqfsKLTTLKrhvgihmktqpvrcgycgqffLDLGRLNAHIRQRHtsnkkiyykcdkcnktykSKYKFerhknthvtenseypciycrniypcsfcayrgryrYHFKAHLRIHlnikpyackycgnafahkssrdahqnihtdlkpylcltcgqsfrtfnlmkrhnlcdhqdvRNYLCNFcnktykdrktldnhilghvdikpykqlsnlqshirishtgerpfqckycnyafkekhhLETHvnlhlgktksfncnvcnysssLKWNLIQHYrihtdekpfncslceKQFRQKIHVKNHLRIIHNmnfcdhcfkfvgpeqelnIFRHCevcdksnnsyllcwkcGFKTSVLNELKAHIkshhfpkqpsicavcgdtfktnYNYFVHMrrhtgfkpyqcktcnaSYASMRVLQHHeithsktlkfpcincgkyFTKLEYMIKHMKRhfntnkpvceICSQTMAHNQVLQRHMTlhftqnkhpcnrcnasFSSMVQLSCHQIRAHGKQKQRfmchrcgiinlkrkYHVYHLKYecgytrtlppelrrQFKHDIVYmdsktnfnihmrihgkdrpfscllcnNTFAQLSTLLNHerihdnhkpykctkcnysaRVLSNKLAHERIYHQDHVFkchinncifstkfySCLRRHRKifhsnesyapakckicnQSFALFSNLNAHYNKHLKVRRfsctncslnFTYLSNLIRhrrikhsqhegkyvcnycgksyidkrdytnhvsvhmerksgytqrchkcnATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLkhfnssnsdnit
Flexible Loop (DISEMBL)
mdhhqheeqcmphesqdertyhCPLCSKQFSKLTTLKRHVGihmktqpvrCGYCGQFFLDLGRLNAHIRqrhtsnkkiyykcdkCNKTYKSKykferhknthvtenseypciYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIkshhfpkqpsICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEithsktlkfpciNCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGytrtlppeLRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHErihdnhkpykctkCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRrikhsqhegkyVCNYCGKSYIDKRDYTNHVSVHMErksgytqrchkcnATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIrhslkhfnssnsdnit
Low Complexity Region (SEG)
MDHHQHEEQCMPHESQDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLKHFNSSNSDNIT
Disordered region (IsUnstruct)
*******************TYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRH**************
Disordered Region (DISOPRED)
******************RTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLKHFNSSNSDN**
Disordered Region (DISEMBL)
*******************TYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQI*********FMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLKHFN********
Disordered Region (DISPRO)
*****HEEQCMPHESQDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLKHFNSSNS*N**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDHHQHEEQCMPHESQDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLKHFNSSNSDNIT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	836	2.2.26 [Sep-21-2011]
A8MQ14	1090	Zinc finger protein 850 O	yes	N/A	0.917	0.703	0.311	3e-93
O43345	1167	Zinc finger protein 208 O	no	N/A	0.938	0.672	0.289	3e-88
Q05481	1191	Zinc finger protein 91 OS	no	N/A	0.891	0.625	0.294	2e-84
A6NN14	1173	Zinc finger protein 729 O	no	N/A	0.921	0.656	0.293	5e-84
Q96IR2	970	Zinc finger protein 845 O	no	N/A	0.880	0.758	0.291	3e-81
Q8TF20	911	Zinc finger protein 721 O	no	N/A	0.925	0.849	0.291	4e-80
Q8NB50	900	Zinc finger protein 62 ho	no	N/A	0.854	0.793	0.294	9e-79
A8MXY4	1036	Zinc finger protein 99 OS	no	N/A	0.931	0.751	0.280	3e-78
Q6ZNA1	936	Zinc finger protein 836 O	no	N/A	0.755	0.675	0.306	3e-78
Q8C827	914	Zinc finger protein 62 OS	no	N/A	0.815	0.746	0.297	1e-77

>sp|A8MQ14|ZN850_HUMAN Zinc finger protein 850 OS=Homo sapiens GN=ZNF850 PE=3 SV=2

 Score =  343 bits (880), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 257/826 (31%), Positives = 361/826 (43%), Gaps = 59/826 (7%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
             E+ YHC  C K F+  +TL RH  IH   +P  C  CG+ F     L  H R  HT  K
Sbjct: 305  GEKPYHCKQCGKSFTVGSTLIRHQQIHTGEKPYDCKECGKSFASGSALIRHQR-IHTGEK 363

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
               Y C +C K++       RH+  H  E            Y C  C     +R     H
Sbjct: 364  P--YDCKECGKSFTFHSALIRHQRIHTGEKP----------YDCKECGKSFTFRSGLIGH 411

Query: 137  LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
              IH   KPY CK CG +F   S+   HQ IHT  KPY C  CG+SF + + + +H    
Sbjct: 412  QAIHTGEKPYDCKECGKSFTAGSTLIQHQRIHTGEKPYDCKECGKSFASGSALLQHQRI- 470

Query: 197  HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQLSNLQSHIRISHTG 247
            H   + Y C  C K++  R T + H   H   KPY            S L  H RI HTG
Sbjct: 471  HTGEKPYCCKECGKSFTFRSTRNRHQRIHTGEKPYNCKECGKSFASGSALLQHQRI-HTG 529

Query: 248  ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
            E+P+ CK C  +F  +  L  H  +H G+ K ++C  C  S + +  LIQH RIHT EKP
Sbjct: 530  EKPYHCKECGKSFTFRSGLIGHQAVHTGE-KPYDCKECGKSFTSRSALIQHQRIHTGEKP 588

Query: 308  FNCSLCEKQFRQKIHVKNHLRI-----IHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSN 362
            ++C  C K F     +  H +I      ++   C   F+       L + +H ++   + 
Sbjct: 589  YHCKECGKSFTVGSTLLQHQQIHTGEKPYDCKECGKAFRL-----RLRLTQHQQI--HTG 641

Query: 363  NSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKP 422
                 C +CG     ++ L  H + H   K P  C  CG  F+       H R HTG KP
Sbjct: 642  EKPYQCQECGKAFVSVSGLTQHHRIHTGEK-PYECPDCGKAFRQRTYLNQHRRIHTGEKP 700

Query: 423  YQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCE 482
            Y+CK C  S+     L  H+  H+    +    CGK FT    +I+H + H       C+
Sbjct: 701  YECKECGKSFTFCSGLIQHQQNHTDEKPYDGKECGKSFTSHSTLIQHQQIHTGEKPYDCK 760

Query: 483  ICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRC 542
             C ++   +  L +H  +H  +  + C  C  SF+S   L  HQ    G++   + C  C
Sbjct: 761  ECGKSFTSHSTLIQHQQIHTGEKLYDCKECGKSFTSHSTLIQHQPLHTGEKP--YHCKEC 818

Query: 543  GIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSC 602
            G     R   + H     G  R    E  + F        S++    H RIH  ++P+ C
Sbjct: 819  GKSFTLRSALIQHRPVHTGEKRYSCKECGKSF-------TSRSTLIEHQRIHTGEKPYHC 871

Query: 603  LLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINN 662
              C  +FA  S ++ H RIH   KPY C +C  + R  S    H+RI+  +  ++CH   
Sbjct: 872  KECGKSFAFRSAIIQHRRIHTGEKPYDCKECGKAFRRRSKLTQHQRIHTGEKPYRCH--E 929

Query: 663  CIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNC 722
            C  +   +S L +H  I H+ E   P +CK C +SF   ++L  H   H   R + C  C
Sbjct: 930  CGKAFVRFSGLTKHHSI-HTGEK--PYECKTCGKSFRQRTHLTLHQRIHTGDRPYECKEC 986

Query: 723  SLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHK 782
              +FT  S LIRH+R      E  Y C  CGK++      + H  +H   K   T +C +
Sbjct: 987  GKSFTCGSELIRHQRTHTG--EKPYDCKECGKAFRCPSQLSQHKRIHTGEK---TYQCPE 1041

Query: 783  CNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
            C   F     L+RH   H  +  Y C  C K FKQ T   RH   H
Sbjct: 1042 CGKAFFYASGLSRHQSVHTGEKPYECKTCGKAFKQLTQLTRHQRIH 1087

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|O43345|ZN208_HUMAN Zinc finger protein 208 OS=Homo sapiens GN=ZNF208 PE=2 SV=1

 Score =  327 bits (837), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 253/874 (28%), Positives = 369/874 (42%), Gaps = 89/874 (10%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
             E+ Y C  C K FSK++TL  H  IH   +P +C  CG+ F     L  H +  HT  K
Sbjct: 309  GEKPYKCKECGKAFSKVSTLITHKAIHAGEKPYKCKECGKAFSKFSILTKH-KVIHTGEK 367

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYC-------------------RNI 117
               YKC++C K YK       HK  H  E   Y C  C                      
Sbjct: 368  P--YKCEECGKAYKWPSTLSYHKKIHTGEKP-YKCEECGKGFSMFSILTKHEVIHTGEKP 424

Query: 118  YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCL 177
            Y C  C     +  +   H +IH    PY C+ CG  F+  S+   H+ IHT  KPY C 
Sbjct: 425  YKCEECGKAFNWSSNLMEHKKIHTGETPYKCEECGKGFSWSSTLSYHKKIHTVEKPYKCE 484

Query: 178  TCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK----- 232
             CG++F    ++ +H    H   + Y C  C KT+    TL  H   H   KPYK     
Sbjct: 485  ECGKAFNQSAILIKHKRI-HTGEKPYKCEECGKTFSKVSTLTTHKAIHAGEKPYKCKECG 543

Query: 233  ----QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYS 288
                ++S L +H  I H GE+P++CK C  AF +   L  H  +H G+ K + C  C  +
Sbjct: 544  KTFIKVSTLTTHKAI-HAGEKPYKCKECGKAFSKFSILTKHKVIHTGE-KPYKCEECGKA 601

Query: 289  SSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNF---CDHCFKFVGP 345
             +   NL++H RIHT EKP+ C  C K F     +  H ++IH       C+ C K    
Sbjct: 602  FNWSSNLMEHKRIHTGEKPYKCEECGKSFSTFSVLTKH-KVIHTGEKPYKCEECGKAYKW 660

Query: 346  EQELNIFRH---------CEVCDKS-NNSYLL--------------CWKCGFKTSVLNEL 381
               L+  +          CE C K+ N S +L              C +CG   S ++ L
Sbjct: 661  SSTLSYHKKIHTVEKPYKCEECGKAFNRSAILIKHKRIHTDEKPYKCEECGKTFSKVSTL 720

Query: 382  KAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHH 441
              H K+ H  ++P  C  CG  F        H   HTG KPY+C+ C  +Y     L +H
Sbjct: 721  TTH-KAIHAGEKPYKCKECGKAFSKFSILTKHKVIHTGEKPYKCEECGKAYKWPSTLSYH 779

Query: 442  EITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLH 501
            +  H+    + C  CGK F+    + KH   H       CE C +  +   V  +H   H
Sbjct: 780  KKIHTGEKPYKCEECGKGFSMFSILTKHEVIHTGEKPYKCEECGKAFSWLSVFSKHKKTH 839

Query: 502  FTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECG 561
              +  + C  C  ++++   L+ H++   G++   + C  CG         + H K   G
Sbjct: 840  AGEKFYKCEACGKAYNTFSILTKHKVIHTGEKP--YKCEECGKAFNWSSNLMEHKKIHTG 897

Query: 562  YTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERI 621
             T     E  + F          ++   H   H  ++P+ C  C   F+  S L  H+  
Sbjct: 898  ETPYKCEECDKAF-------SWPSSLTEHKATHAGEKPYKCEECGKAFSWPSRLTEHKAT 950

Query: 622  HDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFH 681
            H   +PYKC +C  +    SN + H+RI+  +  +KC      FST  +S L +H K+ H
Sbjct: 951  HAGEEPYKCEECGKAFNWSSNLMEHKRIHTGEKPYKCEECGKSFST--FSILTKH-KVIH 1007

Query: 682  SNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHS 741
            + E   P KC+ C +++   S L+ H   H   + + C  C   F   S L +H+ I   
Sbjct: 1008 TGEK--PYKCEECGKAYKWSSTLSYHKKIHTVEKPYKCEECGKGFVMFSILAKHKVI--- 1062

Query: 742  QHEGK--YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKT 799
             H G+  Y C  CGK+Y        H  +H   K    + C K  +TF I   LT+H   
Sbjct: 1063 -HTGEKLYKCEECGKAYKWPSTLRYHKKIHTGEKPYKCEECGKAFSTFSI---LTKHKVI 1118

Query: 800  HLIQ--YRCTRCNKTFKQNTSFIRHSLKHFNSSN 831
            H  +  Y+C  C K F   + F +H   H    N
Sbjct: 1119 HTGEKPYKCEECGKAFSWLSVFSKHKKIHTGVPN 1152

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q05481|ZNF91_HUMAN Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE=2 SV=2

 Score =  314 bits (805), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 250/848 (29%), Positives = 363/848 (42%), Gaps = 103/848 (12%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
            +++ Y C  C K F +L+TL  H  I  K +  +C  CG+ FL    L  H R  HT  K
Sbjct: 234  EDKPYKCEECGKAFKQLSTLTTHKIICAKEKIYKCEECGKAFLWSSTLTRHKRI-HTGEK 292

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
               YKC++C K +       +HK  H  E            Y C  C            H
Sbjct: 293  P--YKCEECGKAFSHSSTLAKHKRIHTGEKP----------YKCEECGKAFSRSSTLAKH 340

Query: 137  LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
             RIH   KPY CK CG AF++ S+   H+  HT+ KPY C  C ++F+  + + +H +  
Sbjct: 341  KRIHTGEKPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECDKAFKRLSTLTKHKII- 399

Query: 197  HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTG 247
            H   + Y C  C K +     L  H   H   KPYK           S+L  H R  HT 
Sbjct: 400  HAGEKLYKCEECGKAFNRSSNLTIHKFIHTGEKPYKCEECGKAFNWSSSLTKHKRF-HTR 458

Query: 248  ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
            E+PF+CK C  AF     L  H  +H G+ K + C  C  +      L +H  IHT EKP
Sbjct: 459  EKPFKCKECGKAFIWSSTLTRHKRIHTGE-KPYKCEECGKAFRQSSTLTKHKIIHTGEKP 517

Query: 308  FNCSLCEKQFRQKIHVKNHLRIIHNMN---FCDHCFKFVGPEQELNIFR---------HC 355
            +    C K FRQ + +  H +IIH+      C  C K       L   +          C
Sbjct: 518  YKFEECGKAFRQSLTLNKH-KIIHSREKPYKCKECGKAFKQFSTLTTHKIIHAGKKLYKC 576

Query: 356  EVCDKS-NNSYLL--------------CWKCGFKTSVLNELKAHIKSHHFPKQPSICAVC 400
            E C K+ N+S  L              C +CG      + L+ H K  H  ++P  C  C
Sbjct: 577  EECGKAFNHSSSLSTHKIIHTGEKSYKCEECGKAFLWSSTLRRH-KRIHTGEKPYKCEEC 635

Query: 401  GDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYF 460
            G  F  +     H R HTG KPY+CK C  ++++   L +H+ITH++   + C  C K F
Sbjct: 636  GKAFSHSSALAKHKRIHTGEKPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECDKTF 695

Query: 461  TKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMV 520
             +L  + KH   H       CE C +    +  L  H  +H  +  + C  C  +F+   
Sbjct: 696  KRLSTLTKHKIIHAGEKLYKCEECGKAFNRSSNLTIHKFIHTGEKPYKCEECGKAFNWSS 755

Query: 521  QLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVY 580
             L+ H+ R H ++K  F C  CG   +              ++ TL              
Sbjct: 756  SLTKHK-RIHTREKP-FKCKECGKAFI--------------WSSTL-------------- 785

Query: 581  MDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVL 640
                     H RIH  ++P+ C  C   F++ STL  H+ IH   KPYKC +C  + +  
Sbjct: 786  -------TRHKRIHTGEKPYKCEECGKAFSRSSTLTKHKTIHTGEKPYKCKECGKAFKHS 838

Query: 641  SNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFAL 700
            S    H+ I+  + ++KC    C  +    S L  H KI H+ E   P+K + C+++F  
Sbjct: 839  SALAKHKIIHAGEKLYKC--EECGKAFNQSSNLTTH-KIIHTKEK--PSKSEECDKAFIW 893

Query: 701  FSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKR 760
             S L  H   H + + + C  C   F+  S+L  H+R+     E  Y C  CGK++    
Sbjct: 894  SSTLTEHKRIHTREKTYKCEECGKAFSQPSHLTTHKRMHTG--EKPYKCEECGKAFSQSS 951

Query: 761  DYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTS 818
              T H  +H   K     +C +C   FR    LT H   H  +  Y+C  C K F Q+++
Sbjct: 952  TLTTHKIIHTGEKP---YKCEECGKAFRKSSTLTEHKIIHTGEKPYKCEECGKAFSQSST 1008

Query: 819  FIRHSLKH 826
              RH+  H
Sbjct: 1009 LTRHTRMH 1016

Homo sapiens (taxid: 9606)

>sp|A6NN14|ZN729_HUMAN Zinc finger protein 729 OS=Homo sapiens GN=ZNF729 PE=2 SV=3

 Score =  313 bits (801), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 249/849 (29%), Positives = 369/849 (43%), Gaps = 79/849 (9%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
           ++T+ C  CSK F  L+ L RH  IH++    +C   G+ F     L  H +  HT +K 
Sbjct: 177 KKTFKCIKCSKSFFMLSCLIRHKRIHIRQNIYKCEERGKAFKSFSTLTKH-KIIHTEDKP 235

Query: 78  IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
             YK  KC   +K    F +HK  H  E            + C  C        +   H 
Sbjct: 236 YKYK--KCGNAFKFSSTFTKHKRIHTGETP----------FRCEECGKAFNQSSNLTDHK 283

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
           RIH   K Y C+ CG AF   S+ +AH+ IHT  KPY C  CG++F  F+ +++H +  H
Sbjct: 284 RIHTGEKTYKCEECGKAFKGSSNFNAHKVIHTAEKPYKCEDCGKTFNHFSALRKHKII-H 342

Query: 198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQLSNLQSHIRISHTGE 248
              + Y    C K +    TL  H + H   KPY         K  S L  H ++ HTGE
Sbjct: 343 TGKKPYKREECGKAFSQSSTLRKHEIIHTGEKPYKCEECGKAFKWSSKLTVH-KVVHTGE 401

Query: 249 RPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
           +P++C+ C  AF +   L+ H  +H GK K + C  C  + +    L++H  IHT EKP+
Sbjct: 402 KPYKCEECGKAFSQFSTLKKHKIIHTGK-KPYKCEECGKAFNSSSTLMKHKIIHTGEKPY 460

Query: 309 NCSLCEKQFRQKIHVKNHLRIIHNMN---FCDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
            C  C K FRQ  H+  H + IH       C+ C K        +  R  ++       Y
Sbjct: 461 KCEECGKAFRQSSHLTRH-KAIHTGEKPYKCEECGKAF---NHFSDLRRHKIIHTGKKPY 516

Query: 366 LLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQC 425
             C +CG   S  + L+ H +  H  ++P  C  CG  FK +    VH   HTG KP +C
Sbjct: 517 -KCEECGKAFSQSSTLRNH-QIIHTGEKPYKCEECGKAFKWSSKLTVHKVIHTGEKPCKC 574

Query: 426 KTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICS 485
           + C  ++     L+ H++ H++   + C  CGK F     + KH   H       CE C 
Sbjct: 575 EECGKAFKHFSALRKHKVIHTREKLYKCEECGKAFNNSSILAKHKIIHTGKKPYKCEECG 634

Query: 486 QTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGI- 544
           +    +  L RH  +H  +  + C  C  +FS    L  H+I   GK+   + C  CG  
Sbjct: 635 KAFRQSSHLTRHKAIHTGEKPYKCEECGKAFSHFSALRRHKIIHTGKKP--YKCEECGKA 692

Query: 545 ---INLKRKYHVYHLK------YECGYTRTLPPELRRQFKHDIVYMDSK----------- 584
               +  R++ + H         ECG       +L     H +++   K           
Sbjct: 693 FSHFSALRRHKIIHTGEKPYKCEECGKAFKWSSKLTV---HKVIHTAEKPCKCEECGKSF 749

Query: 585 ---TNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLS 641
              +    H  IH +++ + C  C   F   S L+ H+ IH   KPYKC +C  + +  S
Sbjct: 750 KHFSALRKHKVIHTREKLYKCEECVKAFNSFSALMKHKVIHTGEKPYKCEECGKAFKWSS 809

Query: 642 NKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALF 701
               H+ I+  +   KC    C  + K +S LR+H KI H+ E   P KC+ C ++F   
Sbjct: 810 KLTVHKVIHTGEKPCKC--EECGKAFKHFSALRKH-KIIHTGEK--PYKCEECGKAFHQS 864

Query: 702 SNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGK--YVCNYCGKSYIDK 759
           S L  H   H   + + C  C   F  LS+L  H+ I    H GK  Y C  CGK++   
Sbjct: 865 SKLAKHKKIHTGEKPYKCEECGKAFNRLSHLTTHKII----HTGKKPYKCEECGKAFNQS 920

Query: 760 RDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNT 817
            + T H  +H   K     +C +C   F     LT H   H  +  Y+C  C K F Q++
Sbjct: 921 ANLTTHKRIHTGEKP---YKCEECGRAFSQSSTLTAHKIIHAGEKPYKCEECGKAFSQSS 977

Query: 818 SFIRHSLKH 826
           +   H + H
Sbjct: 978 TLTTHKIIH 986

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q96IR2|ZN845_HUMAN Zinc finger protein 845 OS=Homo sapiens GN=ZNF845 PE=2 SV=3

 Score =  303 bits (777), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 239/819 (29%), Positives = 360/819 (43%), Gaps = 83/819 (10%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
           E+++ C    K F+  + L++H  IH+  +  +C  CG+ F     L  H R+ HT  K 
Sbjct: 212 EKSFQCNESGKAFNYSSVLRKHQIIHLGAKQYKCDVCGKVFNQKRYLACH-RRCHTGKKP 270

Query: 78  IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
             YKC+ C KT+  +     H   H  E            Y CS C            H 
Sbjct: 271 --YKCNDCGKTFSQELTLTCHHRLHTGEKH----------YKCSECGKTFSRNSALVIHK 318

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
            IH   K Y C  CG  F+  S    H+ +HT  KPY C  C ++F   + ++RH    H
Sbjct: 319 AIHTGEKSYKCNECGKTFSQTSYLVYHRRLHTGEKPYKCEECDKAFSFKSNLERHRKI-H 377

Query: 198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTGE 248
              + Y CN C++T+  + +L  H   H   KPYK         Q+S+L  H R+ HTGE
Sbjct: 378 TGEKPYKCNECSRTFSRKSSLTRHRRLHTGEKPYKCNDCGKTFSQMSSLVYHRRL-HTGE 436

Query: 249 RPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
           +P++C+ C+ AF  K +LE H  +H G+ K + CN C  + S   +L+ H R+HT EKP+
Sbjct: 437 KPYKCEECDEAFSFKSNLERHRRIHTGE-KPYKCNDCGKTFSQTSSLVYHRRLHTGEKPY 495

Query: 309 NCSLCEKQFRQKIHVKNHLRIIHN---MNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
            C  C++ F  K +++ H RIIH    +  C+ C K    +  L   RHC +        
Sbjct: 496 KCEECDEAFSFKSNLERH-RIIHTGEKLYKCNECGKTFSRKSSLT--RHCRL-------- 544

Query: 366 LLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQC 425
                                  H  ++P  C  CG  F+       H   H   K Y+C
Sbjct: 545 -----------------------HTGEKPYQCNECGKAFRGQSALIYHQAIHGIGKLYKC 581

Query: 426 KTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICS 485
             C+  +++   + +H   H++   + C  CGK+F    Y+  H + H       CE C 
Sbjct: 582 NDCHQVFSNATTIANHWRIHNEERSYKCNRCGKFFRHRSYLAVHWRTHSGEKPYKCEECD 641

Query: 486 QTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGII 545
           +  +    LQRH  +H  +  + CN C  +FS    L+CH+ R H  +K  + C+ CG  
Sbjct: 642 EAFSFKSNLQRHRRIHTGEKPYRCNECGKTFSRKSYLTCHR-RLHTGEKP-YKCNECGKT 699

Query: 546 NLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLC 605
             +    + H     G       E  + F         K++   H+R+H  ++P+ C  C
Sbjct: 700 FGRNSALIIHKAIHTGEKPYKCNECGKAF-------SQKSSLTCHLRLHTGEKPYKCEEC 752

Query: 606 NNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIF 665
           +  F++ S+L  H RIH   KPYKC  C+ +    S+   H RI+  +  +KC  N C  
Sbjct: 753 DKVFSRKSSLEKHRRIHTGEKPYKCKVCDKAFGRDSHLAQHTRIHTGEKPYKC--NECGK 810

Query: 666 STKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLN 725
           + +  S L  H+ I HS E   P KC  C ++F   S L  H   H   + + C+ C   
Sbjct: 811 NFRHNSALVIHKAI-HSGEK--PYKCNECGKTFRHNSALEIHKAIHTGEKPYKCSECGKV 867

Query: 726 FTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNA 785
           F   +NL RH R+     E  Y CN CGK +  +     H  +H   K     +C++C  
Sbjct: 868 FNRKANLSRHHRLHTG--EKPYKCNKCGKVFNQQAHLACHHRIHTGEKP---YKCNECGK 922

Query: 786 TFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRH 822
           TFR    L  H   H  +  Y+C  C K F +     RH
Sbjct: 923 TFRHNSVLVIHKTIHTGEKPYKCNECGKVFNRKAKLARH 961

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8TF20|ZN721_HUMAN Zinc finger protein 721 OS=Homo sapiens GN=ZNF721 PE=2 SV=2

 Score =  300 bits (768), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 247/847 (29%), Positives = 360/847 (42%), Gaps = 73/847 (8%)

Query: 17  DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
            E+ + C  C K F K + L +H GIH   +P  C   G+ F     LN H ++ HT  K
Sbjct: 93  GEKHFKCNECGKSFQKFSDLTQHKGIHAGEKPYTCEERGKDFGWYTDLNQH-KKIHTGEK 151

Query: 77  KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
              YKC++C K +        HK  H  E +     Y       +F      +  +   +
Sbjct: 152 P--YKCEECGKAFNRSTNLTAHKRIHNREKA-----YTGEDRDRAF-----GWSTNLNEY 199

Query: 137 LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
            +IH   KPY CK CG AF H S  + H+ IHT  KPY C  CG+   + +   +H    
Sbjct: 200 KKIHTGDKPYKCKECGKAFMHSSHLNKHEKIHTGEKPYKCKECGKVISSSSSFAKHKRI- 258

Query: 197 HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQLSNLQSHIRISHTG 247
           H   + + C  C K +    TL  H   H   KPY         +Q +NL  H RI HTG
Sbjct: 259 HTGEKPFKCLECGKAFNISTTLTKHRRIHTGEKPYTCEVCGKAFRQSANLYVHRRI-HTG 317

Query: 248 ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
           E+P+ C  C   F++  +L  H  +H G+ K + C  C  +      L QH +IHT EKP
Sbjct: 318 EKPYTCGECGKTFRQSANLYVHRRIHTGE-KPYKCEDCGKAFGRYTALNQHKKIHTGEKP 376

Query: 308 FNCSLCEKQFRQKIHVKNHLRI--IHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
           + C  C K F    ++  H RI        C+   +  G    LN ++     DK     
Sbjct: 377 YKCEECGKAFNSSTNLTAHKRIHTREKPYTCEDRGRAFGLSTNLNEYKKIHTGDKP---- 432

Query: 366 LLCWKCGFKTSVLNELKAHIKSH---HFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKP 422
             C +CG   + ++ L  H+  H   H  K+P  C  CG    ++ ++  H R HTG KP
Sbjct: 433 YKCKECG--KAFIHSL--HLNKHEKIHTGKKPYKCKQCGKVITSSSSFAKHKRIHTGEKP 488

Query: 423 YQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCE 482
           ++C  C  ++ S   L  H   H+    + C  CGK F +   +  H + H       CE
Sbjct: 489 FECLECGKAFTSSTTLTKHRRIHTGEKPYTCEVCGKAFRQSAILYVHRRIHTGEKPYTCE 548

Query: 483 ICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRC 542
            C +T   +  L  H  +H  +  + C  C  +F     L+ H+ + H  +K  + C  C
Sbjct: 549 ECGKTFRQSANLYVHRRIHTGEKPYKCEECGKAFGRYTDLNQHK-KIHTGEKL-YKCEEC 606

Query: 543 G-------IINLKRKYHVYHLKY---ECG-----------YTRTLPPELRRQFKHDIVYM 581
           G        +N ++K +     Y   ECG           +T+ L  E   + +      
Sbjct: 607 GKDFVWYTDLNQQKKIYTGEKPYKCEECGKAFAPSTDLNQHTKILTGEQSYKCEECGKAF 666

Query: 582 DSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLS 641
                 N H +IH  ++P+ C  C   F++   L  H R+H   KPYKC     S    +
Sbjct: 667 GWSIALNQHKKIHTGEKPYKCEECGKAFSRSRNLTTHRRVHTREKPYKCEDRGRSFGWST 726

Query: 642 NKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALF 701
           N   +++I+  D ++KC     +F  K  S L RH KI H+ +   P KCK C +     
Sbjct: 727 NLNEYKKIHTGDKLYKCKECGKVF--KQSSHLNRHEKI-HTGKK--PYKCKECGKVITSS 781

Query: 702 SNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRD 761
           S+   H   H   + F C  C   FT  + L +HRRI     E  Y C  CGK++     
Sbjct: 782 SSFAKHKRIHTGEKPFKCLECGKAFTSSTTLTKHRRIHTG--EKPYTCEECGKAFRQSAI 839

Query: 762 YTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSF 819
              H  +H   K  YT  C +C  TFR    L  H K H  +  Y C  C KTF+Q+ + 
Sbjct: 840 LYVHRRIHTGEKP-YT--CGECGKTFRQSANLYAHKKIHTGEKPYTCGDCGKTFRQSANL 896

Query: 820 IRHSLKH 826
             H   H
Sbjct: 897 YAHKKIH 903

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8NB50|ZFP62_HUMAN Zinc finger protein 62 homolog OS=Homo sapiens GN=ZFP62 PE=2 SV=3

 Score =  295 bits (756), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 228/773 (29%), Positives = 338/773 (43%), Gaps = 59/773 (7%)

Query: 17  DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
            E+ Y C  C   F   ++L+ H  IH   +P +C  CG+ ++    L  H +  H+  K
Sbjct: 165 GEKRYECDDCGGTFRSSSSLRVHKRIHTGEKPYKCEECGKAYMSYSSLINH-KSTHSGEK 223

Query: 77  KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
               KCD+C K++      ++HK  H  E            Y C  C    R     + H
Sbjct: 224 NC--KCDECGKSFNYSSVLDQHKRIHTGEKP----------YECGECGKAFRNSSGLRVH 271

Query: 137 LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
            RIH   KPY C  CG  F++ S    H+ IHT  KPY C  CG++F T   +  H    
Sbjct: 272 KRIHTGEKPYECDICGKTFSNSSGLRVHKRIHTGEKPYECDECGKAFITCRTLLNHKSIH 331

Query: 197 HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQLSNLQSHIRISHTG 247
             D + Y C+ C K++     L  H + H   KPY         +  S L  H RI HTG
Sbjct: 332 FGD-KPYKCDECEKSFNYSSLLIQHKVIHTGEKPYECDECGKAFRNSSGLIVHKRI-HTG 389

Query: 248 ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
           E+P++C  C  AF     L  H ++H GK K+  C  C  S S    L+QH  IHT E+P
Sbjct: 390 EKPYKCDVCGKAFSYSSGLAVHKSIHPGK-KAHECKECGKSFSYNSLLLQHRTIHTGERP 448

Query: 308 FNCSLCEKQFRQKIHVKNHLRIIHNMNF--CDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
           + C +C K FR    +K H R+        CD C K       L   +   + +K     
Sbjct: 449 YVCDVCGKTFRNNAGLKVHRRLHTGEKPYKCDVCGKAYISRSSLKNHKGIHLGEKP---- 504

Query: 366 LLCWKCGFKTSVLN---ELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKP 422
              +KC +     N    L+ H K  H  ++P  C  CG  F+ N    VH R HTG +P
Sbjct: 505 ---YKCSYCEKSFNYSSALEQH-KRIHTREKPFGCDECGKAFRNNSGLKVHKRIHTGERP 560

Query: 423 YQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCE 482
           Y+C+ C  +Y S+  L +H+  H     F C  C K F     +  H K H       C+
Sbjct: 561 YKCEECGKAYISLSSLINHKSVHPGEKPFKCDECEKAFITYRTLTNHKKVHLGEKPYKCD 620

Query: 483 ICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRC 542
           +C ++  +  +L +H  +H  +  + C+RC   F +   L  H+ R H  ++  + C  C
Sbjct: 621 VCEKSFNYTSLLSQHRRVHTREKPYECDRCEKVFRNNSSLKVHK-RIHTGERP-YECDVC 678

Query: 543 GIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSC 602
           G   +     + H     G T     E  + F        S+T  + H R+H  ++PF C
Sbjct: 679 GKAYISHSSLINHKSTHPGRTPHTCDECGKAF------FSSRTLIS-HKRVHLGEKPFKC 731

Query: 603 LLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINN 662
           + C  +F+  S L  H+RIH   KPY C +C  + R  S    H+RI+  +  ++C  + 
Sbjct: 732 VECGKSFSYSSLLSQHKRIHTGEKPYVCDRCGKAFRNSSGLTVHKRIHTGEKPYEC--DE 789

Query: 663 CIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNC 722
           C  +   +S L  H+ +    + Y    C+ C +SF   S L+ H   H   + + C  C
Sbjct: 790 CGKAYISHSSLINHKSVHQGKQPY---NCE-CGKSFNYRSVLDQHKRIHTGKKPYRCNEC 845

Query: 723 SLNFTYLSNLIRHRRIKHSQHEGK---YVCNYCGKSYIDKRDYTNHVSVHMER 772
              F   SNL +H+R  H+  E     YV +Y G S   KR Y    ++   R
Sbjct: 846 GKAFNIRSNLTKHKRT-HTGEESLNVIYVGSYSGTS--QKRTYEGGNALDGGR 895

May play a role in differentiating skeletal muscle.

Homo sapiens (taxid: 9606)

>sp|A8MXY4|ZNF99_HUMAN Zinc finger protein 99 OS=Homo sapiens GN=ZNF99 PE=2 SV=2

 Score =  293 bits (751), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 245/873 (28%), Positives = 365/873 (41%), Gaps = 94/873 (10%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
             ++ Y C  C K F + + L RH  IH   +P +C  CG+ F     L  H +  HT  K
Sbjct: 190  GKKPYKCEECGKAFKQSSHLTRHKAIHTGEKPYKCEECGKAFNHFSALRKH-QIIHTGKK 248

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYC-------------------RNI 117
               YKC++C K +       +H+  H TE   Y    C                   +  
Sbjct: 249  P--YKCEECGKAFSQSSTLRKHEIIH-TEEKPYKYEECGKAFSNLSALRKHEIIHTGQKP 305

Query: 118  YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCL 177
            Y C  C    ++      H  IH   KP  C+ CG AF   S+   H+ IHT  +PY C 
Sbjct: 306  YKCEECGKAFKWSSKLTVHKVIHTAEKPCKCEECGKAFKRFSALRKHKIIHTGKQPYKCE 365

Query: 178  TCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKP------- 230
             C ++F  F+ +++H +  H   + Y C  C K +K    L  H + H++ KP       
Sbjct: 366  ECSKAFSNFSALRKHEII-HTGEKPYKCEECGKAFKWSSKLTVHKVIHMEEKPCKCEECG 424

Query: 231  --YKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYS 288
              +K  S L+ H +I HTG++P++C+ C  AF     L  H  +H GK K + C  C  +
Sbjct: 425  KAFKHFSALRKH-KIIHTGKKPYKCEECGKAFNNSSTLMKHKIIHTGK-KPYKCEECGKA 482

Query: 289  SSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMN---FCDHCFKFVGP 345
                 +L +H  IHT EKP+ C  C K F     ++ H +IIH       C+ C K    
Sbjct: 483  FKQSSHLTRHKAIHTGEKPYKCEECGKAFNHFSALRKH-QIIHTGKKPYKCEECGKAF-- 539

Query: 346  EQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFK 405
              + +  R  E+       Y  C +CG      + L  H K  H  ++P  C  CG  F 
Sbjct: 540  -SQSSTLRKHEIIHTGEKPY-KCEECGKAFKWSSHLTRH-KVIHTEEKPYKCEECGKAF- 595

Query: 406  TNYNYFVHMRR----HTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFT 461
               N+F  +R+    HTG KPY+C+ C  +++    L+ HEI H+    + C  CGK F 
Sbjct: 596  ---NHFSALRKHKIIHTGKKPYKCEECGKAFSQSSTLRKHEIIHTGEKPYKCEECGKAFK 652

Query: 462  KLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQ 521
                +  H   H       CE C +   H   L++H  +H  +  + C  C  +F++   
Sbjct: 653  WSSKLTVHKVIHTAEKPCKCEECGKAFKHFSALRKHKIIHTGKKPYKCEECGKAFNNSST 712

Query: 522  LSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLK------YECGYTRTLPPELRRQFK 575
            L  H+I   G  ++ + C  C +    RK+ + H         ECG        LR   K
Sbjct: 713  LRKHEIIHTG--EKSYKCEECAL----RKHEIIHTGKKPYKCEECGKAFNNSSTLR---K 763

Query: 576  HDIVYMDSK--------------TNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERI 621
            H I+Y   K              ++   H  +H  ++P+ C  C   F   STL  H+ I
Sbjct: 764  HKIIYTGKKPYKCEECGKAFKQSSHLTRHKAVHTGEKPYKCGECGKAFNNSSTLKKHKLI 823

Query: 622  HDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFH 681
            H   K YKC +C  +    S    H+ I+  +  +KC    C  +    S L +H KI H
Sbjct: 824  HTREKSYKCEECGKAFSNFSALRKHKIIHTGEKPYKCEECECGKAFNNSSTLMKH-KIIH 882

Query: 682  SNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHS 741
            + E   P KC+ C + F  FS L  H   H   + + C  C   F   S+L +H+ I   
Sbjct: 883  TGEK--PYKCEECGKGFNNFSTLMKHKIIHTGEKPYKCEECGKAFKQSSHLTKHKSIHTG 940

Query: 742  QHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHK------CNATFRIKKFLTR 795
              E  Y C   GK++      T H  +H  +K    + C K      C   F     LT+
Sbjct: 941  --EKPYKCEERGKAFSHFSRLTKHRIIHTGKKPYKCEECEKPYKCEECGKAFNQSSHLTQ 998

Query: 796  HMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
            H   H     Y+C  C K F   ++  +H + H
Sbjct: 999  HKTIHTGGKTYKCEECGKAFNHLSALTKHKIIH 1031

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZNA1|ZN836_HUMAN Zinc finger protein 836 OS=Homo sapiens GN=ZNF836 PE=2 SV=2

 Score =  293 bits (751), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 216/704 (30%), Positives = 310/704 (44%), Gaps = 72/704 (10%)

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
           + H+  KPY CK CG AF   SS   HQ +HT  KPY C  CG++F   +L+  H +  H
Sbjct: 210 KTHIREKPYMCKGCGKAFRVSSSLINHQMVHTTEKPYKCNECGKAFHRGSLLTIHQIV-H 268

Query: 198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTGE 248
              + Y C  C K ++    L NH   H   KPYK         Q  NL  H RI HTGE
Sbjct: 269 TRGKPYQCGVCGKIFRQNSDLVNHRRSHTGEKPYKCNECGKSFSQSYNLAIHQRI-HTGE 327

Query: 249 RPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
           +P++C  C   FK+   L TH  +H G+ K + C++C        NL+ H RIHT EKP+
Sbjct: 328 KPYKCNECGKTFKQGSCLTTHQIIHTGE-KPYQCDICGKVFRQNSNLVNHQRIHTGEKPY 386

Query: 309 NCSLCEKQFRQKIHVKNHLRIIHNMN---FCDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
            C++C K F Q  ++  H + +H+ N    CD C K       L   +     +K     
Sbjct: 387 KCNICGKSFSQSSNLATH-QTVHSGNKPYKCDECGKTFKRSSSLTTHQIIHTGEKP---- 441

Query: 366 LLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQC 425
             C  C    S  ++L  H +SH   K P  C  CG  F    +   H R HTG KPY+C
Sbjct: 442 YTCDVCDKVFSQRSQLARHQRSHTGEK-PYKCNECGKVFSQTSHLVGHRRIHTGEKPYKC 500

Query: 426 KTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICS 485
             C  ++    +L  H+I H++  ++ C  CGK F++   +++H++ H       C +C 
Sbjct: 501 DKCGKAFKQGSLLTRHKIIHTREKRYQCGECGKVFSENSCLVRHLRIHTGEQPYKCNVCG 560

Query: 486 QTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGII 545
           +   ++  L  H  +H  +    CN C   F +   L+ H +R H  QK  + C+ CG  
Sbjct: 561 KVFNYSGNLSIHKRIHTGEKPFQCNECGTVFRNYSCLARH-LRIHTGQKP-YKCNVCG-- 616

Query: 546 NLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLC 605
                                            V+ DS  N + H RIH  ++PF C  C
Sbjct: 617 --------------------------------KVFNDS-GNLSNHKRIHTGEKPFQCNEC 643

Query: 606 NNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIF 665
              F+  S L  H +IH   KPYKC  C  +    S+   H  I+  +  + C+     F
Sbjct: 644 GKVFSYYSCLARHRKIHTGEKPYKCNDCGKAYTQRSSLTKHLIIHTGEKPYNCN----EF 699

Query: 666 STKFYSCLRRHRKIFHSNESYA-PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSL 724
              F    +  R  +H N +   P KC  C ++F+  + L  H  +H     + C  C  
Sbjct: 700 GGAFIQSSKLAR--YHRNPTGEKPHKCSHCGRTFSHITGLTYHQRRHTGEMPYKCIECGQ 757

Query: 725 NFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCN 784
            F   SNL RHRRI     E  Y CN CGK +  +     H S+H   K  Y   C++C 
Sbjct: 758 VFNSTSNLARHRRIHTG--EKPYKCNECGKVFRHQSTLARHRSIHTGEKP-YV--CNECG 812

Query: 785 ATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
             FR++  L  H K H     Y+C  C K F + +  + H   H
Sbjct: 813 KAFRVRSILVNHQKMHTGDKPYKCNECGKAFIERSKLVYHQRNH 856

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8C827|ZFP62_MOUSE Zinc finger protein 62 OS=Mus musculus GN=Zfp62 PE=2 SV=1

 Score =  291 bits (745), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 219/735 (29%), Positives = 323/735 (43%), Gaps = 53/735 (7%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
           E+ Y C  C   F   ++L+ H  IH   +P +C  CG+ ++    L  H +  H+  K 
Sbjct: 156 EKRYECDDCRGTFRSSSSLRVHKRIHTGEKPYKCDECGKAYMSYSSLINH-KSTHSGEKN 214

Query: 78  IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
              KCD+C K++      ++HK  H  E            Y C  C    R     + H 
Sbjct: 215 C--KCDECGKSFNYSSVLDQHKRIHTGEKP----------YECGECGKAFRNSSGLRVHK 262

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
           RIH   KPY C  CG  F++ S    H+ IHT  KPY C  CG++F T   +  H     
Sbjct: 263 RIHTGEKPYECDTCGKTFSNSSGLRVHKRIHTGEKPYECDECGKAFITCRTLLNHKSIHF 322

Query: 198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQLSNLQSHIRISHTGE 248
            D + Y C+ C K++     L  H + H   KPY         +  S L  H RI HTGE
Sbjct: 323 GD-KPYKCDECEKSFNYSSLLIQHKVIHTGEKPYECDECGKAFRNSSGLIVHKRI-HTGE 380

Query: 249 RPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
           +P++C  C  AF     L  H ++H GK K+  C  C  S S    L+QH  IHT E+P+
Sbjct: 381 KPYKCDICGKAFSYSSGLAVHKSIHPGK-KAHECKDCGKSFSYNSLLLQHKTIHTGERPY 439

Query: 309 NCSLCEKQFRQKIHVKNHLRIIHNMNF--CDHCFKFVGPEQELNIFRHCEVCDKSNNSYL 366
            C +C K FR    +K H R+        CD C K       L   +   + +K      
Sbjct: 440 VCDVCGKTFRNNSGLKVHRRLHTGEKPYKCDVCGKAYISRSSLKNHKGIHMGEKP----- 494

Query: 367 LCWKCGFKTSVLN---ELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPY 423
             +KC +     N    L+ H K  H  ++P  C  CG  F+ N    VH R HTG +PY
Sbjct: 495 --YKCSYCEKSFNYSSALEQH-KRIHTREKPFGCDECGKAFRNNSGLKVHKRIHTGERPY 551

Query: 424 QCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEI 483
           +C+ C  +Y S+  L +H+  H     F C  C K F     ++ H K H       C++
Sbjct: 552 KCEECGKAYISLSSLINHKSVHPGEKPFKCDECEKAFITYRTLLNHKKIHLGEKPYKCDV 611

Query: 484 CSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCG 543
           C ++  +  +L +H  +H  +    C+RC   F +   L  H+ R H  +K  + C  CG
Sbjct: 612 CEKSFNYTSLLSQHKRVHTREKPFECDRCEKVFRNNSSLKVHK-RIHTGEKP-YECDICG 669

Query: 544 IINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCL 603
              +     + H     G T     E  + F        S+T  + H R+H  ++PF C+
Sbjct: 670 KAYISHSSLINHKSTHPGKTSYTCDECGKAF------FSSRTLIS-HKRVHLGEKPFKCV 722

Query: 604 LCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNC 663
            C  +F+  S L  H+RIH   KPY C  C  + R  S    H+RI+  +  + C  + C
Sbjct: 723 ECGKSFSYSSLLSQHKRIHTGEKPYVCDWCGKAFRNSSGLTVHKRIHTGEKPYGC--DEC 780

Query: 664 IFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCS 723
             +   +S L  H+ +    +   P  C+ C +SF   S L+ H   H   + + C +C 
Sbjct: 781 EKAYISHSSLINHKSVHRGKQ---PYNCE-CGKSFNYRSVLDQHKRIHTGKKPYRCNDCG 836

Query: 724 LNFTYLSNLIRHRRI 738
             F   SNL +H+RI
Sbjct: 837 KAFNIRSNLTKHKRI 851

May play a role in differentiating skeletal muscle.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	836
440894949	1041	Zinc finger protein 420, partial [Bos gr	0.923	0.741	0.314	1e-96
440913057	1147	Zinc finger protein 624, partial [Bos gr	0.921	0.671	0.310	9e-95
397522308	1103	PREDICTED: zinc finger protein 624-like	0.931	0.706	0.299	1e-94
326666983	853	PREDICTED: zinc finger protein 91-like [	0.927	0.908	0.303	1e-94
326667289	1202	PREDICTED: zinc finger protein 729-like	0.913	0.635	0.308	5e-94
395517277	1045	PREDICTED: zinc finger protein 850-like	0.881	0.705	0.295	1e-93
395748613	1264	PREDICTED: zinc finger protein 624 [Pong	0.921	0.609	0.309	1e-93
344307373	1109	PREDICTED: zinc finger protein 208 [Loxo	0.923	0.696	0.313	2e-93
326667110	1395	PREDICTED: zinc finger protein 729-like,	0.903	0.541	0.314	3e-93
334328883	1289	PREDICTED: zinc finger protein 850-like	0.924	0.599	0.290	7e-93

>gi|440894949|gb|ELR47267.1| Zinc finger protein 420, partial [Bos grunniens mutus]

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 260/826 (31%), Positives = 370/826 (44%), Gaps = 54/826 (6%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
             E+ Y C  C K F++L+ L  H  IH   +P  C  CG+ F+   +L+ H +     N 
Sbjct: 249  GEKLYECKECRKVFTQLSQLILHKRIHTGEKPYECKECGKAFICGSQLSQHQK---IHNG 305

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
            +  Y+C +C K +       +H+  H  E   Y C  C   +       RG        H
Sbjct: 306  EKPYECQECGKAFIRGSLLMQHQRIHTGEKP-YKCEECGKAF------IRGS---QLTQH 355

Query: 137  LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
             RIH N KPY CK CG  F+H S    HQ IHT  KPY C  CG++F   +L+ RH    
Sbjct: 356  QRIHTNEKPYECKECGKTFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRI- 414

Query: 197  HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTG 247
            H   + Y C  C KT+     L  H   H   KPY+         + S L  H RI HTG
Sbjct: 415  HTGEKPYECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRI-HTG 473

Query: 248  ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
            E+P++CK C  AF +  HL  H  LH G+ K + CN C  + +    LIQH RIHT EKP
Sbjct: 474  EKPYECKECRMAFTQSSHLSQHQRLHTGE-KPYVCNECGKAFARGLLLIQHQRIHTGEKP 532

Query: 308  FNCSLCEKQFRQKIHVKNHLRI--IHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
            + C  C K F +   +  H RI        C  C K      +L + +     +K     
Sbjct: 533  YQCKECGKAFIRGSQLTQHQRIHTGEKPYGCKECGKAFSHGSQLTLHQRIHTGEKPYECK 592

Query: 366  LLCWKCGFKTSVLNE-LKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQ 424
              C K   ++S L+   + H     + +Q   C  CG  F    N   H R HTG KPY 
Sbjct: 593  E-CRKAFTQSSHLSRHQRVHTGEKPYQEQSYECNECGKAFIKMSNLIRHQRIHTGEKPYA 651

Query: 425  CKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEIC 484
            CK C  S++    L  HE  H+    + C  CGK F++ + +I H K H       C  C
Sbjct: 652  CKECGKSFSQKSNLIDHEKIHTGEKPYECHECGKAFSQKQSLIAHQKVHTGEKPYACNEC 711

Query: 485  SQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGI 544
             +       L  HM  H  +  + C++C  +FS    L  H +R H  +K  + C+ CG 
Sbjct: 712  GKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQFSMLIIH-VRIHTGEKP-YECNECGK 769

Query: 545  INLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLL 604
               +      H++   G       E R+ F H       K NF  H +IH +++P+ C  
Sbjct: 770  SFSQSSALTVHMRSHTGEKPYECKECRKAFSH-------KKNFITHQKIHTREKPYECNE 822

Query: 605  CNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCI 664
            C   F Q+S L+ H+RIH   KPY C +C  +    SN +AHE+I+  +  ++C+     
Sbjct: 823  CGKAFIQMSNLVRHQRIHTGEKPYICKECGKAFSQKSNLIAHEKIHSGEKPYECNECGKA 882

Query: 665  FSTK--FYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNC 722
            FS K  F +    H+K+ H+ E   P  C  C ++F+  ++L  H   H   + + C  C
Sbjct: 883  FSQKQNFIT----HQKV-HTGEK--PYDCNECGKAFSQIASLTLHLRSHTGEKPYECDKC 935

Query: 723  SLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHK 782
               F+  S L  H R      E  YVCN CGK++  +     H+  H   K      C+K
Sbjct: 936  GKAFSQCSLLNLHMRSHTG--EKPYVCNECGKAFSQRTSLIVHMRGHTGEK---PYECNK 990

Query: 783  CNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
            C   F     LT H++ H  +  + C++C K F Q +S   H  KH
Sbjct: 991  CGKAFSQSSSLTIHIRGHTGEKPFDCSKCGKAFSQISSLTLHMRKH 1036

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|440913057|gb|ELR62561.1| Zinc finger protein 624, partial [Bos grunniens mutus]

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 258/831 (31%), Positives = 369/831 (44%), Gaps = 61/831 (7%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
            +E+ Y C  C K F   T    H  IH   +P RC  CG+ +     L  HIR  HT  K
Sbjct: 328  EEKPYKCNECGKSFKNTTIFNVHQRIHTGEKPFRCNECGKAYRSNSSLIVHIRT-HTGEK 386

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
               Y+C +C K +     F  H+  H  E   Y C  C   +    C            H
Sbjct: 387  P--YECSECGKAFNRIANFTEHQRIHTGEKP-YKCNECGKAFINYSC---------LSVH 434

Query: 137  LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
             R+H   KPY C  CG AF   SS   HQ IHT+ KPYLC  CG+SFR  + +  H    
Sbjct: 435  HRMHTGEKPYKCNECGKAFMRSSSLIIHQRIHTEEKPYLCNECGESFRIKSHLTVHQRI- 493

Query: 197  HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQLSNLQSHIRISHTG 247
            H   + Y C  C + +     L  H   H  +KPY         +  S L  H R +HTG
Sbjct: 494  HTGEKPYKCTDCERAFTKMVNLKEHQKIHTGVKPYTCYNCGKSFRTKSYLIVHQR-THTG 552

Query: 248  ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
            E+P++C  C  AF     L  H   H G+ K + CN C    +       H R HT EKP
Sbjct: 553  EKPYKCNECEKAFTNTSQLTVHQRRHTGE-KPYKCNECGKVFTSNSGFNTHQRTHTGEKP 611

Query: 308  FNCSLCEKQFRQKIHVKNHLRIIHNMNF--CDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
            F C+ C K F Q +HV  H +I        CD C K       L +       +K     
Sbjct: 612  FKCNDCGKAFSQMVHVTEHQKIHSGEKPYKCDVCGKAFRRGSYLTVHWRTHTGEKP---- 667

Query: 366  LLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQC 425
              C +CG     L++L  H +  H  ++P  C  CG  F+TN ++ VH+R HTG KPY+C
Sbjct: 668  YTCKECGKGCITLSQLTLHQRI-HTGERPYRCEECGKAFRTNSDFIVHLRMHTGEKPYKC 726

Query: 426  KTCNASYASMRVLQHHEITHSKTLK--------FPCINCGKYFTKLEYMIKHMKRHFNTN 477
              C  ++ S   L  H+ TH + ++        + C  CGK F K   +I H   H    
Sbjct: 727  SECGKAFRSSSSLTVHQRTHQREIQKIYPGEKPYKCKVCGKKFRKYPSLIAHQNSHAKEK 786

Query: 478  KPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRF 537
               CE C +   H   L  H  +H  +  + C++C  +FS    L+ HQ R H  +K  +
Sbjct: 787  SYECEECGKEFRHVSSLIAHQRMHTGEKPYECHQCGKAFSQRAHLTIHQ-RIHTGEKP-Y 844

Query: 538  MCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKD 597
             C  CG    +R +   H +   G       E  + F H    ++       H R+H  +
Sbjct: 845  KCDDCGKDFSQRAHLTIHQRTHTGEKPYKCLECGKTFSHSSSLIN-------HQRVHTGE 897

Query: 598  RPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFK 657
            +P+ C  C  TF+Q + LL H++IH   KPYKC +C       +  + H+RI+  +  +K
Sbjct: 898  KPYICNECGKTFSQSTHLLQHQKIHTGKKPYKCNECWKVFSQSTYLIRHQRIHSGEKCYK 957

Query: 658  CHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRF 717
            C  N C  +    S L +H+      +SY    C IC ++F+  +NL  H+  H   + +
Sbjct: 958  C--NECGKAFAHSSTLIQHQTTHTGEKSYI---CSICGKAFSQSANLTQHHRTHTGEKPY 1012

Query: 718  SCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYT 777
             C+ C   F+   +L +H+RI +   E  + CN CGK+Y    + T H  +H   K    
Sbjct: 1013 KCSVCGKAFSQSVHLTQHQRIHNG--EKPFKCNICGKAYRQGANLTQHQRIHTGEKP--- 1067

Query: 778  QRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
             +C++C   F     L +H +TH  +  Y+C  CNK F Q T  I+H   H
Sbjct: 1068 YKCNECGKAFIYSSSLNQHQRTHTGERPYKCNACNKDFSQRTCLIQHQRIH 1118

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397522308|ref|XP_003831216.1| PREDICTED: zinc finger protein 624-like isoform 3 [Pan paniscus]

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 260/868 (29%), Positives = 383/868 (44%), Gaps = 89/868 (10%)

Query: 18   ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
            E+ Y C +C K FS+   L +H  I    +P +C  CG+ F D  +L    R + T N +
Sbjct: 231  EKPYQCNVCGKSFSQCARLNQHQRIQTGEKPYKCSECGKAFSDKSKL---ARHQETHNGE 287

Query: 78   IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYC-------------------RNIY 118
              YKCD C K +++K     H+ TH TE   Y C  C                      +
Sbjct: 288  KPYKCDDCGKAFRNKSYLSVHQKTH-TEEKPYQCNECGKSFKNTTIFNVHQRIHTGEKPF 346

Query: 119  PCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLT 178
             C+ C    R       H+R H   KPY C  CG AF   ++   HQ IHT  KPY C  
Sbjct: 347  RCNECGKAYRSNSSLIVHIRTHTGEKPYECNECGKAFNRIANFTEHQRIHTGEKPYKCNE 406

Query: 179  CGQSFRTFN-----------------------LMKRHNLCDHQDV----RNYLCNFCNKT 211
            CG++F  ++                        M+  +L  HQ +    + YLCN C ++
Sbjct: 407  CGKAFINYSCLTVHHRMHTGEKPYKCTECGKAFMRSSSLIIHQRIHTEEKPYLCNECGES 466

Query: 212  YKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTGERPFQCKYCNYAFKE 262
            ++ +  L  H   H   KPYK           S L  H R +HTGE+P++C  C  AF  
Sbjct: 467  FRIKSHLTVHQRIHTGEKPYKCNDCGKSFRTKSYLIVHQR-THTGEKPYKCNECEKAFTN 525

Query: 263  KHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIH 322
               L  H   H G+ K + CN C    +       H R HT EKPF C+ C K F Q +H
Sbjct: 526  TSQLTVHQRRHTGE-KPYKCNECGKVFTSNSGFNTHQRTHTGEKPFKCNDCGKAFSQMVH 584

Query: 323  VKNHLRIIHNMNF--CDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNE 380
            V  H +I        CD C K       L +       +K       C +CG     L++
Sbjct: 585  VTEHQKIHSGEKPYKCDVCGKAFRRGSYLTVHWRTHTGEKP----YTCKECGKGCITLSQ 640

Query: 381  LKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQH 440
            L  H + H   ++P  C  CG  F+TN ++ VH+R HTG KPY+C  C  ++ S   L  
Sbjct: 641  LTLHQRIH-TGERPYKCEECGKAFRTNSDFTVHLRMHTGEKPYKCNECGKAFRSSSSLTV 699

Query: 441  HEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTL 500
            H+  H +  +  C  CGK F K   ++KH   H       CE C +   H   L  H  +
Sbjct: 700  HQRIHQRETQLKCNVCGKKFRKYPSLLKHQSTHAKEKSYECEECGKEFRHISSLIAHQRM 759

Query: 501  HFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYEC 560
            H  +  + C++C  +FS    L+ HQ R H  +K  + C  CG    +R +   H +   
Sbjct: 760  HTGEKPYECHQCGKAFSQRAHLTIHQ-RIHTGEKP-YKCDDCGKDFSQRAHLTIHQRTHT 817

Query: 561  GYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHER 620
            G       E  + F H    ++       H R+H  ++P+ C  C  TF+Q + LL H++
Sbjct: 818  GEKPYKCLECGKTFSHSSSLIN-------HQRVHTGEKPYICNECGKTFSQSTHLLQHQK 870

Query: 621  IHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIF 680
            IH   KPYKC +C       +  + H+RI+  +  +KC  N C  +    S L +H+   
Sbjct: 871  IHTGKKPYKCNECWKVFSQSTYLIRHQRIHSGEKCYKC--NECGKAFAHSSTLIQHQTTH 928

Query: 681  HSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKH 740
               +SY    C IC ++F+  +NL  H+  H   + + C+ C   F+   +L +H+RI +
Sbjct: 929  TGEKSYI---CNICGKAFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHN 985

Query: 741  SQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTH 800
               E  + CN CGK+Y    + T H  +H   K     +C++C   F     L +H +TH
Sbjct: 986  G--EKPFKCNICGKAYRQGANLTQHQRIHTGEKP---YKCNECGKAFIYSSSLNQHQRTH 1040

Query: 801  LIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
              +  Y+C  C+K F Q T  I+H   H
Sbjct: 1041 TGERPYKCNECDKDFSQRTCLIQHQRIH 1068

Source: Pan paniscus

Species: Pan paniscus

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326666983|ref|XP_003198441.1| PREDICTED: zinc finger protein 91-like [Danio rerio]

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 254/838 (30%), Positives = 384/838 (45%), Gaps = 63/838 (7%)

Query: 17  DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
            ++ + C  C K+F++ T+L  H+ IH   +P RC  CG+ F     L  H+R  HT  K
Sbjct: 34  GKKPHTCTQCGKRFTQKTSLDNHMSIHTGEKPYRCTECGKTFPHKSSLKHHMRT-HTGEK 92

Query: 77  KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYC-------------------RNI 117
              + C +C K+++ K   + H   H  E   + C  C                      
Sbjct: 93  P--FACTQCGKSFERKGYLKIHMMIHTGEK-PFTCTQCGKSFNRSSSLNKHIKIHTGEKP 149

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCL 177
           + C+ C        +   H++IH   KP+ C  CG +F   S  + H  IHT  KP+ C 
Sbjct: 150 FTCTQCGKSFNQSSYLNNHMKIHTGEKPFTCTQCGKSFNQSSYLNLHMRIHTGEKPFTCT 209

Query: 178 TCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY------ 231
            CG+SF   + + +H +  H + + + C  C K++     L+NH+  H   KP+      
Sbjct: 210 QCGRSFNRSSSLNKH-MKIHTEEKPFTCTQCFKSFNRSSHLNNHMKIHTGEKPFTCTQCG 268

Query: 232 ---KQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYS 288
               Q + L  H+RI HTGE+PF C  C  +F +   L  H+ +H G+ K F C  C  S
Sbjct: 269 KSFSQSTYLNKHMRI-HTGEKPFTCTQCEKSFNQSSSLNKHMKIHTGE-KPFRCTQCGRS 326

Query: 289 SSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI-IHNMNF-CDHCFKFVGPE 346
            +   +L  H  IHT EKPF C+ C K F Q   +  H++I      F C  C K     
Sbjct: 327 FNQSSHLNSHMNIHTGEKPFTCTQCGKSFNQSSSLNKHIKIHTGEKPFTCTLCGKSFSQS 386

Query: 347 QELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKT 406
             LN+       +K     + C +CG   +    L  H+K H   K P  C  CG +F  
Sbjct: 387 SSLNLHMKTHTGEKP----ITCTQCGESFNRSANLNEHMKIHTAEK-PFTCTQCGKSFSK 441

Query: 407 NYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYM 466
           + +   HMR HTG KP+ C  C  S++ +  L  H I H+    F C  CGK F++   +
Sbjct: 442 SSSLNQHMRIHTGEKPFTCTQCGNSFSYLSSLNKHMIIHTGKKPFTCTQCGKSFSQSSSL 501

Query: 467 IKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQ 526
             HM  H       C  C ++ + +  L +HM +H  +    C +C  SFS  + L  H 
Sbjct: 502 NYHMMIHAGEKPSACSQCGKSFSCSSYLNKHMRIHTGEKPFSCTQCGKSFSQSLFLKQH- 560

Query: 527 IRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTN 586
           +R H  +K  F C +CG    +     +H++   G       +  + F          + 
Sbjct: 561 MRIHTGEKP-FSCTQCGKSFSQSSSLNHHIRIHTGEKPFTCTQCGKSFIQS-------SQ 612

Query: 587 FNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAH 646
           FN HMRIH  ++ F+C  C  +F++ S+L  H RIH   KP+ CT+C  S R  S+   H
Sbjct: 613 FNRHMRIHAGEKQFTCTQCGKSFSKSSSLNKHMRIHTGEKPFTCTQCGKSFRRSSHLNHH 672

Query: 647 ERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNA 706
            RI+  +  F C    C  S +  S L++H +I H+ E   P  C  C ++F+  S+LN 
Sbjct: 673 MRIHTGEKPFSC--TQCGKSFRRSSSLKQHMRI-HTGE--KPFTCTQCGKNFSQSSSLNH 727

Query: 707 HYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHV 766
           H   H   + F+CT C  +F   S L RH RI     E  + C  CGKS+     +  H+
Sbjct: 728 HMRTHTGEKPFTCTQCGKSFIQSSQLNRHMRIHTG--EKPFTCTRCGKSFSRSSYFNLHM 785

Query: 767 SVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRH 822
            +H   K      C +C  +FR    L  HM+ H  +  + CT+C K+F+Q+++F RH
Sbjct: 786 RIHTGEK---LFSCTQCGKSFRCSSSLKEHMRIHTGEKPFTCTQCGKSFRQSSNFNRH 840

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667289|ref|XP_003198555.1| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 253/821 (30%), Positives = 386/821 (47%), Gaps = 57/821 (6%)

Query: 17  DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
            E+ Y C  CSK+F++  TLK H  IH   +P  C  CG+ F     LN H+R  HT  K
Sbjct: 174 GEKPYKCSQCSKRFARSGTLKTHERIHTGEKPFTCTQCGKSFSKSSSLNQHMRI-HTGKK 232

Query: 77  KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
              + C +C K++        H   H  E     C  C   + CS          +   H
Sbjct: 233 P--FTCTQCGKSFSQSSSLNYHMMIHAGEKPS-ACSQCGKSFSCS---------SYLNKH 280

Query: 137 LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
           +RIH   KP++C  CG +F+  SS + H  IHT  KP+ C  CG+SFR  + +  H++  
Sbjct: 281 MRIHTGEKPFSCTQCGKSFSQSSSLNHHIRIHTGEKPFTCTQCGKSFRRSSHLN-HHMRI 339

Query: 197 HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTG 247
           H + + + C  C K+++   +L  H+  H   KP+          Q S L  H+RI HTG
Sbjct: 340 HTEEKPFSCTQCGKSFRRSSSLRQHMRIHTGEKPFTCTQCGKSFIQSSQLNRHMRI-HTG 398

Query: 248 ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
           E+PF C  C  +F    +   H+ +H G+ K F+C  C  S     +L +H RIH+ EKP
Sbjct: 399 EKPFTCTQCGKSFSRSSYFNLHMRIHTGE-KLFSCTQCGKSFRCSSSLKEHMRIHSGEKP 457

Query: 308 FNCSLCEKQFRQKIHVKNHLRIIHNMN---FCDHCFKFVGPEQELNIFRHCEVCDKSNNS 364
           F C+ C K F +  H+  H+ +IH       C  C+K       LN        +K    
Sbjct: 458 FTCTQCGKSFSRSSHLNEHM-MIHTGEKPFTCTQCWKSFSRSSHLNQHMMIHTGEKP--- 513

Query: 365 YLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQ 424
              C  CG       +LK H+ + H  +    C  CG +F  N++  +HMR HTG KP+ 
Sbjct: 514 -FTCTLCGKSFGRNFDLKTHM-TIHTGENTFTCTQCGKSFGRNFDLKIHMRIHTGEKPFT 571

Query: 425 CKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEIC 484
           C  C  S++    L  H   H++   F C  CGK FT   ++ +H K H      +C  C
Sbjct: 572 CTLCGKSFSRSSHLNEHMKIHTRERSFTCTQCGKSFTLSSHLNRHKKIHTREKPFICSQC 631

Query: 485 SQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGI 544
            +T  ++  L  HM +H  +    C +C  SFS    L+ H +  H ++K  F C  CG 
Sbjct: 632 GKTFNYSSCLNEHMRIHTGEKPFTCTQCGKSFSRSSHLNQHMM-IHTREKP-FTCTLCG- 688

Query: 545 INLKRKYHV-YHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCL 603
            +  R + +  H+    G       +  + F         K +  IHMRIH  ++PF+C 
Sbjct: 689 KSFGRNFDLKTHMTIHTGENTFTCTQCGKSF-------GRKWDLKIHMRIHTGEKPFTCT 741

Query: 604 LCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNC 663
            C  +F++ S L  H +IH   +P+ CT+C     + S+   H++I+ ++  F C    C
Sbjct: 742 QCAKSFSRSSHLNEHMKIHTRERPFTCTQCGKGFTLSSHLNRHKKIHTREKPFTC--TQC 799

Query: 664 IFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCS 723
             +  + SCL  H +I H+ E   P  C  C +SF+  S+LN H   H   + F+CT C 
Sbjct: 800 GKTFNYSSCLNEHMRI-HTGE--KPFTCIQCGKSFSRSSHLNEHMMIHTGEKPFTCTQCG 856

Query: 724 LNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKC 783
             FT  S+L RH++I H++ E  + C+ CGK++        H+ +H   K  +T  C +C
Sbjct: 857 KGFTLSSHLNRHKKI-HTR-EKPFTCSQCGKTFNYSSCLNEHMRIHTGEKP-FT--CTQC 911

Query: 784 NATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRH 822
             +F     L +HM  H  +  + CT C K+F +++    H
Sbjct: 912 GKSFSRSSHLNQHMMIHTREKPFTCTLCGKSFSRSSHLNEH 952

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395517277|ref|XP_003762804.1| PREDICTED: zinc finger protein 850-like [Sarcophilus harrisii]

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 245/830 (29%), Positives = 365/830 (43%), Gaps = 93/830 (11%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
             E+ Y C  C K F    +L  H  IH + +P  C +CG+ F  +  L AH R  HT   
Sbjct: 272  GEKPYECYQCGKAFRHKKSLTVHQKIHTEEKPYACYHCGKAFRQMLSLTAHQR-IHTRIL 330

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
            +  Y+  +C K +        H+  H+ E            Y C+ C      R     H
Sbjct: 331  EEPYESYQCGKDFTDNKSLTLHQTFHIGEKP----------YECNQCGKAFTQRGSLTRH 380

Query: 137  LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
             RIH   KPY CK CG AF+ ++S  AHQ IHT  KPY C  CG++FR        NL +
Sbjct: 381  QRIHTGEKPYECKQCGKAFSQRASLTAHQAIHTGEKPYECNQCGKAFRYMT-----NLTE 435

Query: 197  HQDV----RNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQLSNLQSHIRI 243
            HQ +    + Y CN C K +   ++L  H   H ++KPY         +Q   L  H  I
Sbjct: 436  HQTIHARKKPYKCNKCGKGFTSNRSLSQHQKIHTEVKPYECNQCGKAFRQRGGLTRHQTI 495

Query: 244  SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
             HTGE+P++CK C   F+ K  L  H  +H  + K + C  C  +   K +L+ H  IHT
Sbjct: 496  -HTGEKPYECKQCGETFRYKISLIVHQKIHT-EEKPYECKQCGKAFRYKTSLVGHQGIHT 553

Query: 304  DEKPFNCSLCEKQFRQKIHVKNHLRI-----IHNMNFCDHCFKFVGPEQELNIFRHCEVC 358
             +KP+ C+ C K FRQ  ++  H RI      +  + C   F  +G     ++  H  + 
Sbjct: 554  GDKPYECNQCGKAFRQMGNLTAHQRIHSEEKPYPCSQCGKAFSQIG-----SLTAHLRI- 607

Query: 359  DKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHT 418
              +      C +CG     +  L AH ++ H  ++P  C  CG  F+      VH R HT
Sbjct: 608  -HTGEKPYECHQCGKAFRQMGTLTAH-QAIHTGEKPYECIQCGKAFRDKNALTVHQRIHT 665

Query: 419  GFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNK 478
            G KPY+C  C  ++  +  L  H+  H++   + C  CGK FT+   +  H + H     
Sbjct: 666  GEKPYECSQCGKAFRQIGALTAHQTIHTREKPYECNQCGKTFTRNGTLTAHQRIHTGEKP 725

Query: 479  PVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFM 538
              C+ C +T  + Q L  H  +H  +    CN+C   F      S HQ    G++   + 
Sbjct: 726  YECKQCGETFGYKQSLIVHQKIHTGEKPCKCNQCAKVFRYKTNFSAHQSIHTGEKP--YE 783

Query: 539  CHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDR 598
            C +CG                                      D K    +H R H  ++
Sbjct: 784  CKQCGET-----------------------------------FDHKGTLTVHQRNHTGEK 808

Query: 599  PFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC 658
            P+ C  C   F Q+ TL  H+ IH   KPY+C +C  + R   + + H+RI+  +  ++C
Sbjct: 809  PYECNQCGKAFRQMGTLTAHQAIHTGEKPYECIQCGKAFRCKKSLIRHQRIHTGEKPYEC 868

Query: 659  HINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFS 718
                C  + ++   L  H+KI H+ E   P +CK C ++F   ++L  H   H   + + 
Sbjct: 869  --KQCGETFRYKISLIVHQKI-HTEEK--PYECKQCGKAFRYKTSLIGHQGIHTGDKPYE 923

Query: 719  CTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQ 778
            C  C   F  + NL  H+RI H++ E  Y C+ CGK++      T H+ +H   K     
Sbjct: 924  CNQCGKAFRQMGNLTAHQRI-HTE-EKPYPCSQCGKAFSQIGSLTAHLRIHTGEKP---Y 978

Query: 779  RCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
             CH+C   FR    LT H++ H  +  Y C +C K F Q    IRH   H
Sbjct: 979  ECHQCGKAFRQMGTLTAHLRVHTGEKPYECKQCGKPFTQRAPLIRHQRIH 1028

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395748613|ref|XP_002827131.2| PREDICTED: zinc finger protein 624 [Pongo abelii]

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 257/831 (30%), Positives = 369/831 (44%), Gaps = 61/831 (7%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
            +E+ Y C  C K F   T    H  IH   +P RC  CG+ +     L  HIR  HT  K
Sbjct: 439  EEKPYQCNECGKSFKNTTIFNVHQRIHTGEKPFRCNECGKAYRSNSSLIVHIRT-HTGEK 497

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
               Y+C++C K +     F  H+  H  E   Y C  C   +    C            H
Sbjct: 498  P--YECNECGKAFNRIANFTEHQRIHTGEKP-YKCNECGKAFINYSC---------LTVH 545

Query: 137  LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
             R+H   KPY C  CG AF   SS   HQ IHT+ KPYLC  CG+SFR  + +  H    
Sbjct: 546  HRMHTGEKPYKCTECGKAFMRSSSLIIHQRIHTEEKPYLCNECGESFRIKSHLTVHQRI- 604

Query: 197  HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTG 247
            H   + Y C  C + +     L  H   H  +KPYK           S L  H R +HTG
Sbjct: 605  HTGEKPYKCTDCERAFTKMVNLKEHQKIHTGVKPYKCYDCGKSFRTKSYLIVHQR-THTG 663

Query: 248  ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
            E+P++C  C  AF     L  H   H G+ K + CN C    +       H R HT EKP
Sbjct: 664  EKPYKCNECEKAFTNTSQLTVHQRRHTGE-KPYKCNECGKVFTSNSGFNTHQRTHTGEKP 722

Query: 308  FNCSLCEKQFRQKIHVKNHLRIIHNMNF--CDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
            F C+ C K F Q +HV  H +I        CD C K       L +       +K     
Sbjct: 723  FKCNDCGKAFSQMVHVTEHQKIHSGEKPYKCDVCGKAFRRGSYLTVHWRTHTGEKP---- 778

Query: 366  LLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQC 425
              C +CG     L++L  H +  H  ++P  C  CG  F+TN ++ VH+R HTG KPY+C
Sbjct: 779  YTCKECGKGCITLSQLTLHQRI-HTGERPYKCEECGKAFRTNSDFTVHLRMHTGEKPYKC 837

Query: 426  KTCNASYASMRVLQHHEITHSKTLK--------FPCINCGKYFTKLEYMIKHMKRHFNTN 477
              C  ++ S   L  H+  H +  +        + C  CGK F K   ++KH   H    
Sbjct: 838  NECGKAFRSSSSLTVHQRIHQRETQKILPGEKPYKCNVCGKKFRKYPSLLKHQSTHAKEK 897

Query: 478  KPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRF 537
               CE C +   H   L  H  +H  +  + C++C  +FS    L+ HQ R H  +K  +
Sbjct: 898  SYECEECGKEFRHISSLIAHQRMHTGEKPYECHQCGKAFSQRAHLTIHQ-RIHTGEKP-Y 955

Query: 538  MCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKD 597
             C  CG    +R +   H +   G       E  + F H    ++       H R+H  +
Sbjct: 956  KCDDCGKDFSQRAHLTIHQRTHTGEKPYKCLECGKTFSHSSSLIN-------HQRVHTGE 1008

Query: 598  RPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFK 657
            +P+ C  C  TF+Q + LL H++IH   KPYKC +C       +  + H+RI+  +  +K
Sbjct: 1009 KPYICNECGKTFSQSTHLLQHQKIHTGKKPYKCNECWKVFSQSTYLIRHQRIHSGEKCYK 1068

Query: 658  CHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRF 717
            C  N C  +    S L +H+      +SY    C IC ++F+  +NL  H+  H   + +
Sbjct: 1069 C--NECGKAFAHSSTLIQHQTTHTGEKSYI---CNICGKAFSQSANLTQHHRTHTGEKPY 1123

Query: 718  SCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYT 777
             C+ C   F+   +L +H+RI +   E  + CN CGK+Y    + T H  +H   K    
Sbjct: 1124 KCSVCGKAFSQSVHLTQHQRIHNG--EKPFKCNICGKAYRQGANLTQHQRIHTGEKP--- 1178

Query: 778  QRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
             +C++C   F     L +H +TH  +  Y+C  C+K F Q T  I+H   H
Sbjct: 1179 YKCNECGKAFIYSSSLNQHQRTHTGERPYKCNECDKDFSQRTCLIQHQRIH 1229

Source: Pongo abelii

Species: Pongo abelii

Genus: Pongo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|344307373|ref|XP_003422356.1| PREDICTED: zinc finger protein 208 [Loxodonta africana]

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 266/849 (31%), Positives = 375/849 (44%), Gaps = 77/849 (9%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
             E+ Y C  C K F++L+ L  H  IH   +P +C  CG+ F+   +L+ H +     N 
Sbjct: 269  GEKLYECKECRKVFTQLSQLILHKRIHTGEKPYQCKECGKAFICGSQLSQHQK---IHNG 325

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
            +  Y+C++C K +       +H+  H  E   Y C  C   +       RG        H
Sbjct: 326  EKPYECNECGKAFIRGSLLMQHQRIHTGEKP-YKCEECGKAF------IRGS---QLTQH 375

Query: 137  LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
            LRIH N KPY CK CG  F+H S    HQ IHT  KPY C  CG++F   +L+ RH    
Sbjct: 376  LRIHTNEKPYECKECGKTFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRI- 434

Query: 197  HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTG 247
            H   + Y C  C KT+     L  H   H   KPY+         + S L  H RI HTG
Sbjct: 435  HTGEKPYECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRI-HTG 493

Query: 248  ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
            E+P++CK C  AF +  HL  H  LH G+ K + CN C  + +    LIQH RIHT EKP
Sbjct: 494  EKPYECKECRMAFTQSSHLSQHQRLHTGE-KPYVCNECGKAFARGLLLIQHQRIHTGEKP 552

Query: 308  FNCSLCEKQFRQKIHVKNHLRI--IHNMNFCDHCFKFVGPEQELNIFR---------HCE 356
            + C  C K F +   +  H RI        C  C K      +L + +          C 
Sbjct: 553  YQCKECGKAFIRGSQLTQHQRIHTGEKPYECKECGKAFSHGSQLTLHQRIHTGEKPYECN 612

Query: 357  VCDKS--NNSYLL-------------CWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCG 401
             C K+   +S+L              C KC    S   +L  H K H   +Q   C+ C 
Sbjct: 613  ECRKAFTQSSHLSRHQRIHTEDKPYECNKCRKAFSNKEKLIKHDKIHSR-EQCYECSECR 671

Query: 402  DTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFT 461
              F    N   H R HTG KPY CK C  S++    L  HE  H+    + C  CGK F+
Sbjct: 672  KAFIKMSNLIRHQRIHTGEKPYVCKQCGKSFSQKSNLIDHEKIHTGEKPYECNECGKSFS 731

Query: 462  KLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQ 521
            + + +  H K H       C  C +       L  HM  H  +  + C++C  +FS    
Sbjct: 732  QKQSLFAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQFSM 791

Query: 522  LSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYM 581
            L  H +R H  +K  + C+ CG    +      H++   G       E R+ F H     
Sbjct: 792  LIIH-VRIHTGEKP-YECNECGKAFSQSSALTVHMRSHTGEKPYECKECRKAFSH----- 844

Query: 582  DSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLS 641
              K NF  H +IH +++P+ C  C   F Q+S L+ H RIH   KPY C +C  +    S
Sbjct: 845  --KKNFITHQKIHTREKPYECNECGKAFIQMSNLVRHHRIHTGEKPYICKECGKAFSQKS 902

Query: 642  NKLAHERIYHQDHVFKCHINNCIFSTK--FYSCLRRHRKIFHSNESYAPAKCKICNQSFA 699
            N +AHE+I+  +  + C+     FS K  F +    H+K+ H+ E   P  C  C ++F+
Sbjct: 903  NLIAHEKIHSGEKPYGCNECGKAFSQKQNFIT----HQKV-HTGEK--PYDCNKCGKAFS 955

Query: 700  LFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDK 759
              ++L  H   H   + + C  C   F+  S L  H R      E  YVCN CGK++  +
Sbjct: 956  QIASLTLHLRSHTGEKPYECDKCGKAFSQCSLLNLHMRSHTG--EKPYVCNECGKAFSQR 1013

Query: 760  RDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNT 817
                 H+  H   K      C+KC   F     LT H++ H  +  + C++C K F Q +
Sbjct: 1014 TSLIVHMRGHTGEKP---YECNKCGKAFSQSSSLTIHIRGHTGEKPFDCSKCGKAFSQIS 1070

Query: 818  SFIRHSLKH 826
            S   H  KH
Sbjct: 1071 SLTLHMRKH 1079

Source: Loxodonta africana

Species: Loxodonta africana

Genus: Loxodonta

Family: Elephantidae

Order: Proboscidea

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667110|ref|XP_003198489.1| PREDICTED: zinc finger protein 729-like, partial [Danio rerio]

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 255/811 (31%), Positives = 367/811 (45%), Gaps = 56/811 (6%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
             E+ + C  C K FS+ +    H+ IH   +P+RC  CG+ F     L  H+R  HT  K
Sbjct: 566  GEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKPIRCTQCGKSFHQSSSLYKHMR-IHTGEK 624

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
               + C +C K+++      +H   H  E   + C  C   + CS          + K H
Sbjct: 625  P--FTCTQCGKSFRQASSLNKHMRIHTGEK-PFTCTQCGISFNCS---------SYLKQH 672

Query: 137  LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSF-RTFNLMKRHNLC 195
            +RIH   KP+ C  CG +F   S  + H  IHT  KP+ C  CG+SF R+ NL +   + 
Sbjct: 673  MRIHTGEKPFTCTQCGRSFNRSSHLNHHMRIHTGEKPFTCTQCGKSFNRSSNLNQHIRI- 731

Query: 196  DHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQLSNLQSHIRISHT 246
             H   +   C  C K+++   +L  H+  H   KP+          Q SN   H+RI HT
Sbjct: 732  -HTGEKPITCTLCGKSFRQSSSLSKHMRTHTGEKPFTCTQCGKSFSQSSNFNLHMRI-HT 789

Query: 247  GERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEK 306
            GE+PF C  C  +F++   L  H   H G+ K F C  C  S +   +L QH RIHT EK
Sbjct: 790  GEKPFTCTQCGKSFRQASSLNKHTRTHTGE-KPFTCTQCGKSFNRSSHLNQHIRIHTGEK 848

Query: 307  PFNCSLCEKQFRQKIHVKNHLRI-IHNMNF-CDHCFKFVGPEQELNIFRHCEVCDKSNNS 364
            P  C+ C K FRQ   +  H+RI      F C  C K       LN  +H  +   +   
Sbjct: 849  PITCTQCGKSFRQSSSLYKHMRIHTGEKPFTCTQCGKSFNCSSHLN--QHIRI--HTGEK 904

Query: 365  YLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQ 424
               C +CG   +  + L  H+  H   K P  C  CG +F  + + + HM+ HTG KPY 
Sbjct: 905  PFRCTQCGKSFNCSSHLNEHMMIHTGEK-PFTCTQCGKSFSKSSSLYRHMKIHTGEKPYT 963

Query: 425  CKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEIC 484
            C  C  S++    L  H   H+    F C  CG  F+K   + +HMK H       C  C
Sbjct: 964  CTECRKSFSQSSSLNLHMRIHTGEKPFTCTECGNSFSKSSSLYRHMKIHTGEKPFTCTEC 1023

Query: 485  SQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGI 544
             ++   +  L  HM +H  +    C +C  SF     L+ H +   G++   F C +CG 
Sbjct: 1024 GKSFIQSSCLNVHMRIHTGEKPFTCTQCGKSFIHSSHLNQHLMIHTGEKP--FKCPQCGK 1081

Query: 545  INLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLL 604
             +  + Y   H+K   G    +  E  + F   I   + K     H RIH  ++P+ C  
Sbjct: 1082 -SFSQSYLKKHMKIHTGVREYMCLECEKTF---ITAAELKR----HKRIHTGEKPYKCSQ 1133

Query: 605  CNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCI 664
            C+  FA   TL  HERIH   K YKC+ C+ S    SN   H RI+  +  F C    C 
Sbjct: 1134 CSKRFAHSGTLKTHERIHTGEKLYKCSHCSKSFNQSSNINLHMRIHTGEKPFTC--TQCR 1191

Query: 665  FSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSL 724
             S    S L +H +I H+ E   P  C  C +SF+L S+LN H   H   + F+CT C  
Sbjct: 1192 KSFSLLSSLNQHMRI-HTGE--KPFTCTQCGKSFSLSSSLNRHMRIHTGEKPFTCTQCGK 1248

Query: 725  NFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCN 784
            +F+  S+  +H R+     E  + C  CGKS+       NH+ +H   K      C +C 
Sbjct: 1249 SFSLSSSFNQHMRMHTG--EKPFTCTQCGKSFSQSSHLYNHMRIHTGEKPFI---CTQCG 1303

Query: 785  ATFRIKKFLTRHMKTHLIQ--YRCTRCNKTF 813
             +F     L  HM+ H  +  + CT+C K+F
Sbjct: 1304 KSFSYSSHLNHHMRIHTGEKPFTCTQCGKSF 1334

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334328883|ref|XP_001375603.2| PREDICTED: zinc finger protein 850-like [Monodelphis domestica]

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 255/878 (29%), Positives = 371/878 (42%), Gaps = 105/878 (11%)

Query: 17   DERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNK 76
             ++ Y C  C K F+    L RH  IH   +P  C  CG+ F     LNAH R  HT  K
Sbjct: 398  GKKPYKCNECGKAFNHKGNLNRHQSIHTGEKPFECNECGKAFTQRRDLNAHQRI-HTGEK 456

Query: 77   KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
               ++C +C K +  +    +H+  H  E            + CS C    R R +   H
Sbjct: 457  P--FECTECGKAFNLRGSLNQHQRIHTGEKP----------FECSECGKAFRQRGYLIYH 504

Query: 137  LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRH---- 192
             RIH   KP+ C  CG AF  + +   H+ IHT  KP+ C  CG++FR    + +H    
Sbjct: 505  KRIHTGEKPFKCNECGKAFRQRGNLSEHKRIHTGEKPFECNLCGKAFRNALCLTQHHRSH 564

Query: 193  -------------------NLCDHQDV----RNYLCNFCNKTYKDRKTLDNHILGHVDIK 229
                               NL  HQ +    + + CN C K +  R  L+ H   H  +K
Sbjct: 565  TGEKPFACNECGKAFNHRRNLNRHQSIHTGEKTFECNECGKAFSQRGDLNAHQRIHTGVK 624

Query: 230  PYK---------QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSF 280
            P+             NL  H RI HTGE+PF+CK C  AF     L  H  +H GK K +
Sbjct: 625  PFACNDCGKTFNHRGNLNVHQRI-HTGEKPFECKECGKAFIHNSELAVHQIIHCGK-KFY 682

Query: 281  NCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMN---FCD 337
             C  C  + S + NL++H RIHT EKP+ C  C K F Q+  +  H +I+H       C 
Sbjct: 683  ECKQCGKAFSERGNLVKHLRIHTGEKPYECKQCGKTFTQRDSLVKH-QIVHTGEKPYVCK 741

Query: 338  HCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSIC 397
             C K     Q  ++ RH  +   +      C +CG   +    L AH ++ H  ++P  C
Sbjct: 742  QCGKAF--TQSGHLTRHQTI--HTGEKPYECKQCGKAFTRKGSLAAH-QTIHTGEEPYEC 796

Query: 398  AVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCG 457
              CG  F    +   H R HTG KPY+CK C  ++     L  H+  H+    F C  CG
Sbjct: 797  EQCGKAFTRRDSLVAHQRVHTGEKPYECKQCGKAFTQRSNLAKHQRIHTGEKPFGCKQCG 856

Query: 458  KYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFS 517
            K FT+   +  H + H       C++C +       L  H  +H  +  + C +C  +F 
Sbjct: 857  KAFTERGSLAAHQRMHTGEKPYGCKLCGKAFPRKGSLSAHQRIHTGEKPYECKQCGKAFI 916

Query: 518  SMVQLSCHQIRAHGKQKQRFMCHRCGIINLKR-------KYHVYHLKYEC-----GYTR- 564
                L+ HQ R H  +K  + C +CG    +R       + H     +EC      +TR 
Sbjct: 917  ERGTLAAHQ-RIHTGEKP-YECKQCGRAFTERGSLAAHQRIHTGEKPFECAQCGKAFTRK 974

Query: 565  -TLPPELR-------RQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLL 616
             +L P  R        + K        + +   H RIH  ++P+ C  C  TF Q + L 
Sbjct: 975  GSLVPHQRIHTGEKPYECKQCGKAFTDRVSLAAHQRIHAGEKPYECTQCGKTFTQRNHLP 1034

Query: 617  NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRH 676
             H+RIH   KPY+C  C  +    S+   H+RI+  +  ++C    C  +  + S L RH
Sbjct: 1035 AHQRIHTGEKPYECKNCGKAFTQRSHLARHQRIHTGEKPYEC--KQCGKAFTYRSSLARH 1092

Query: 677  RKIFHSNESYA-------------PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCS 723
            + I    + Y              P +CK C ++F +  +L  H   H   + + C  C 
Sbjct: 1093 QAIHTGEKPYEYKQCGKRIHTGEKPYECKQCGKAFTVKGSLGRHQTVHTGEKPYECKQCG 1152

Query: 724  LNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKC 783
              FT   NL  H+RI     E  Y C  CGK++ D+     H  +H   K      C +C
Sbjct: 1153 KGFTDRGNLAVHQRIHTG--EKPYECKQCGKAFTDRSSLAAHQRIHTGEKP---YECKQC 1207

Query: 784  NATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSF 819
               F  +  L RH K H  +  Y C +C K F +  S 
Sbjct: 1208 GKAFTQRSHLARHQKIHTGEKPYECKQCRKAFTRRNSL 1245

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	836
ZFIN|ZDB-GENE-110913-143	984	si:ch211-209p16.3 "si:ch211-20	0.924	0.785	0.316	1.6e-111
ZFIN|ZDB-GENE-110913-148	1029	si:dkey-14o6.6 "si:dkey-14o6.6	0.910	0.739	0.309	6.1e-110
ZFIN|ZDB-GENE-071004-105	1014	zgc:173573 "zgc:173573" [Danio	0.942	0.777	0.313	1.9e-108
ZFIN|ZDB-GENE-110913-38	987	si:ch211-208f21.5 "si:ch211-20	0.916	0.776	0.307	4.9e-108
ZFIN|ZDB-GENE-110913-157	981	si:ch211-245n8.1 "si:ch211-245	0.918	0.782	0.313	4.9e-108
ZFIN|ZDB-GENE-110914-25	983	si:dkey-196n19.7 "si:dkey-196n	0.925	0.787	0.301	4e-106
ZFIN|ZDB-GENE-110913-121	898	si:ch211-162i8.3 "si:ch211-162	0.921	0.857	0.301	1.1e-105
ZFIN|ZDB-GENE-071004-104	1011	zgc:173517 "zgc:173517" [Danio	0.913	0.755	0.296	3.6e-105
ZFIN|ZDB-GENE-110914-160	1003	si:dkey-240n22.7 "si:dkey-240n	0.925	0.771	0.301	1.2e-104
UNIPROTKB|F1MJE7	1173	F1MJE7 "Uncharacterized protei	0.927	0.660	0.306	6.7e-104

ZFIN|ZDB-GENE-110913-143 si:ch211-209p16.3 "si:ch211-209p16.3" [Danio rerio (taxid:7955)]

 Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
 Identities = 268/846 (31%), Positives = 387/846 (45%)

Query:    18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
             E+   C  C K FSK ++L +H+ IH   +P  C  CG+ F     LN H+R  HT  K 
Sbjct:     4 EKLVTCTQCGKSFSKSSSLNQHMRIHAGEKPSACSQCGKSFSCSSHLNKHMRN-HTGEKP 62

Query:    78 IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
               + C +C K++       +H   H  E   + C  C      SF +Y     YH    +
Sbjct:    63 --FSCTQCGKSFSYPSALNKHMRIHTGEKP-FSCTQCGK----SF-SYSSSLNYH----M 110

Query:   138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
              IH   KP AC  CG +F+  S  + H  IHT  KP+ C  CG+SFR    +K+H +  H
Sbjct:   111 MIHAGEKPSACSQCGKSFSCSSHLNKHMMIHTGKKPFTCTQCGKSFRNSLFLKQHMMI-H 169

Query:   198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTGE 248
                + + C  C K++    +L++HI+ H   KP+          Q S L  H+RI HTGE
Sbjct:   170 TGEKPFTCTQCGKSFSRSSSLNHHIMIHTGEKPFTCTQCGKSFIQSSQLNLHMRI-HTGE 228

Query:   249 RPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
             +PF C  C  +F+    L+ H+  H G+ K F C  C  S     +L  H RIHT EKPF
Sbjct:   229 KPFSCTQCGKSFRRSSSLKQHMRTHTGE-KPFTCTQCGKSFRRSSHLNHHMRIHTGEKPF 287

Query:   309 NCSLCEKQFRQKIHVKNHLRIIHNMN--F-CDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
              C+ C K FR+  H+ +H+RI H     F C  C K       LN        +K     
Sbjct:   288 TCTQCGKSFRRSSHLNHHMRI-HTGEKPFSCTQCGKSFSKSSSLNHHMRTHTGEKP---- 342

Query:   366 LLCWKCG--FKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPY 423
               C +CG  F+ S+   LK H+  H   K P  C  CG  F  + +   HMR HTG KP+
Sbjct:   343 FTCTQCGKSFRNSLF--LKQHMMIHTGEK-PFSCTQCGKNFSKSSSLNHHMRTHTGEKPF 399

Query:   424 QCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEI 483
              C  C  +++    L HH  TH+    F C  CGK F +   + +HM+ H       C  
Sbjct:   400 SCTQCGKNFSKSSSLNHHMRTHTGEKPFSCTQCGKSFIQSSQLNRHMRIHTGEKPLTCTR 459

Query:   484 CSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCG 543
             C ++ + +     HM +H  +    C  C  SFSS  +++ H +  H  +K  F C +CG
Sbjct:   460 CGKSFSRSLNFNLHMRIHTEEKPFTCTWCGMSFSSSSEMNIHMM-IHTGEKP-FTCTQCG 517

Query:   544 I-------INLKRKYHVYHLKY---ECGYTRTLPPELRRQF-KHD----IVYMDSKTNFN 588
                     +N+    H     +   +CG + +    L +    H             +F+
Sbjct:   518 KSFSCLSHLNVHMMIHTGEKLFTCTQCGKSFSKSSHLNKHMMSHTGEKPFTCTQCGKSFS 577

Query:   589 I------HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSN 642
                    HM IH  ++PF+C  C  +F+QLS L  H  IH    P+ CT+C  S   LS+
Sbjct:   578 QSSSRSKHMMIHTGEKPFTCTQCGKSFSQLSHLDLHMMIHTGETPFTCTQCGKSFNYLSH 637

Query:   643 KLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFS 702
                H  I+  +  FKC    C  S    S L +H +I H+ E   P  C  C +SF+  S
Sbjct:   638 LNHHMMIHTGEKPFKCL--QCGKSFSQSSSLNQHMRI-HTGEK--PFTCTQCGKSFSKSS 692

Query:   703 NLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDY 762
             +LN H   H   + F+CT C   FT  SNL +H RI H+  E  ++C  CGKS+      
Sbjct:   693 SLNKHMRIHTGEKPFTCTQCGKCFTCSSNLNQHMRI-HTG-EKPFICTQCGKSFSQSSSL 750

Query:   763 TNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFI 820
               H+  H   K  +T  C +C  +F     L +HM+ H  +  + CT+C K F  +++  
Sbjct:   751 NYHMKFHAGEKP-FT--CTQCGKSFSQSSHLNKHMRIHTGEKPFTCTQCGKCFTCSSNLN 807

Query:   821 RHSLKH 826
             +H   H
Sbjct:   808 QHMRIH 813

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-148 si:dkey-14o6.6 "si:dkey-14o6.6" [Danio rerio (taxid:7955)]

 Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
 Identities = 258/833 (30%), Positives = 386/833 (46%)

Query:    18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
             E+ + C  C   F+  + LK+H+ IH   +P  C  CG+ F     LN H+R  HT  K 
Sbjct:   227 EKPFTCTQCGISFNCSSYLKQHMRIHTGEKPFTCTQCGRSFNRSSHLNHHMRI-HTGEKP 285

Query:    78 IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
               + C +C K++       +H   H  E    P         C+ C    R       H+
Sbjct:   286 --FTCTQCGKSFNRSSNLNQHIRIHTGEK---PIT-------CTLCGKSFRQSSSLSKHM 333

Query:   138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
             R H   KP+ C  CG +F+  S+ + H  IHT  KP+ C  CG+SFR  + + +H    H
Sbjct:   334 RTHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKPFTCTQCGKSFRQASSLNKHTRT-H 392

Query:   198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKP---------YKQLSNLQSHIRISHTGE 248
                + + C  C K++     L+ HI  H   KP         ++Q S+L  H+RI HTGE
Sbjct:   393 TGEKPFTCTQCGKSFNRSSHLNQHIRIHTGEKPITCTQCGKSFRQSSSLYKHMRI-HTGE 451

Query:   249 RPFQCKYCNYAFKEKHHLETHVN--LHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEK 306
             +PF C  C   F    +L  H++  +H GK K+F C  C  S +   +L QH RIHT EK
Sbjct:   452 KPFTCTQCGKRFNRSANLNKHIHKKIHTGK-KTFTCTQCGKSFNCSSHLNQHIRIHTGEK 510

Query:   307 PFNCSLCEKQFRQKIHVKNHLRIIHNMN--F-CDHCFKFVGPEQELNIFRHCEVCDKSNN 363
             PF C+ C K F    H+  H+ +IH     F C  C K       L  +RH ++      
Sbjct:   511 PFRCTQCGKSFNCSSHLNEHM-MIHTGEKPFTCTQCGKSFSKSSSL--YRHMKI-HTGEK 566

Query:   364 SYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPY 423
              Y  C +C    S  + L  H++ H   K P  C  CG++F  + + + HM+ HTG KP+
Sbjct:   567 PYT-CTECRKSFSQSSSLNLHMRIHTGEK-PFTCTECGNSFSKSSSLYRHMKIHTGEKPF 624

Query:   424 QCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPV-CE 482
              C  C  S+     L  H   H+    F C  CGK F    ++ +H+  H    KP  C 
Sbjct:   625 TCTECGKSFIQSSCLNVHMRIHTGEKPFTCTQCGKSFIHSSHLNQHLMIHTG-EKPFKCP 683

Query:   483 ICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRC 542
              C ++ + +  L++HM +H    ++ C  C  +F +  +L  H+ R H  +K  + C +C
Sbjct:   684 QCGKSFSQSY-LKKHMKIHTGVREYMCLECEKTFITAAELKRHK-RIHTGEKP-YKCSQC 740

Query:   543 -------GIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHG 595
                    G +    + H     Y+C +         + F       +  +N N+HMRIH 
Sbjct:   741 SKRFAHSGTLKTHERIHTGEKLYKCSHCNC-----GKSF-------NQSSNINLHMRIHT 788

Query:   596 KDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHV 655
              ++PF+C  C  +F+ LS+L  H RIH   KP+ CT+C  S  + S+   H RI+  +  
Sbjct:   789 GEKPFTCTQCRKSFSLLSSLNQHMRIHTGEKPFTCTQCGKSFSLSSSLNRHMRIHTGEKP 848

Query:   656 FKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVR 715
             F C    C  S    S   +H ++ H+ E   P  C  C +SF+  S+L  H   H   +
Sbjct:   849 FTC--TQCGKSFSLSSSFNQHMRM-HTGEK--PFTCTQCGKSFSQSSHLYNHMRIHTGEK 903

Query:   716 RFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSG 775
              F CT C  +F+Y S+L  H RI H+  E  + C  CGKS+        H+ +H   KS 
Sbjct:   904 PFICTQCGKSFSYSSHLNHHMRI-HTG-EKPFTCTQCGKSFNCSSQLNQHMRIHTGEKS- 960

Query:   776 YTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
             +T  C +C  +F     L +HM+ H  +  Y CT+C K+F Q +S   H   H
Sbjct:   961 FT--CTQCGKSFYCSSHLNQHMRIHTGEKPYTCTQCGKSFSQLSSRNLHLRIH 1011

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

ZFIN|ZDB-GENE-071004-105 zgc:173573 "zgc:173573" [Danio rerio (taxid:7955)]

 Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
 Identities = 271/865 (31%), Positives = 387/865 (44%)

Query:     3 HHQHEEQCMPHESQDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLG 62
             H  H  Q M   +  E+ Y C  C K FS+ +    H+  H   +P  C  CG+ F    
Sbjct:    44 HSSHLIQHMRSHT-GEKPYTCTQCGKSFSQSSNFNLHMMNHTGEKPYTCTQCGKSFSQSS 102

Query:    63 RLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSF 122
              LN H+R  HT  K   + C +C K++        H   H  E   + C  C      SF
Sbjct:   103 HLNIHMRI-HTGEKP--FTCTQCGKSFSQSSNLNYHMKIHTGEKP-FACTQCGK----SF 154

Query:   123 CAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQS 182
                R R   H   H+RIH   KP+ C  CG +F+  S+ + H   HT  KP+ C  CG+S
Sbjct:   155 I--RSR---HLNLHMRIHTGEKPFTCTQCGKSFSQSSNFNLHMMSHTGEKPFTCTHCGKS 209

Query:   183 FRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQ 233
             F   +    H +  H   + + C  C K++     L+NH+  H   KPY          Q
Sbjct:   210 FGQSSQFNNH-MRIHTGEKPFTCTQCGKSFSQLSNLNNHMRIHTGEKPYTCTQCGKSFSQ 268

Query:   234 LSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCN-VCNYSSSLK 292
             LSNL++H++I HTGE+PF C  C   F     L  H+ +H G+ K F C   C  S    
Sbjct:   269 LSNLKNHMKI-HTGEKPFTCTQCGKTFNYSSTLNQHMRIHTGE-KPFTCTQCCGKSFKQS 326

Query:   293 WNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMN--F-CDHCFKFVGPEQEL 349
              NL  H RIHT EKP+ C+ C K F Q   +  H+RI H     F C  C +     Q  
Sbjct:   327 SNLNLHMRIHTGEKPYTCTQCGKSFSQAPTLYTHMRI-HTGEKPFTCTQCGRSFSQSQ-- 383

Query:   350 NIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYN 409
             N+ +H  V       Y  C +CG   S    L  H++ H   K P  C  CG +F    +
Sbjct:   384 NLQKHM-VIHTGERPYT-CIQCGKSFSQPPSLYTHMRIHTGEK-PYTCTQCGKSFSQTSH 440

Query:   410 YFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKH 469
                HMR HTG KP+ C  C  S++    L  H   H+    F C  CGK F++  ++IKH
Sbjct:   441 LIKHMRIHTGEKPFPCTQCGKSFSQSPSLYAHMRIHTGEKPFTCTQCGKRFSQSSHLIKH 500

Query:   470 MKRHFNTNKPV-CEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIR 528
             M+ H    KP  C  C ++ + +  L  HM +H    ++ C  C+ +F    +L  HQ R
Sbjct:   501 MRIHTG-EKPFPCTRCGKSFSRSSHLNDHMKIHTGVKEYMCFECDKTFIKAGELKQHQ-R 558

Query:   529 AHGKQKQRFMCHRC-----GIINLKR--KYHVYHLKYECGY-------TRTLPPELRR-- 572
              H  +K  + C  C     G+  LK+  + H     YEC         T TL   +R   
Sbjct:   559 VHTGEKP-YECSHCNKRFGGLGTLKKHERIHTGEKPYECSLCNKRFNCTGTLKKHVRTHT 617

Query:   573 -----QFKH-DIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHK 626
                  +  H +  +  S T    HMRIH  ++P+ C  C  +F+Q S +  H RIH   K
Sbjct:   618 GEKPYECSHCNKRFSCSGTLTKHHMRIHTGEKPYMCTQCGKSFSQSSDVNKHMRIHTGEK 677

Query:   627 PYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESY 686
             P+ CT+C  S    S    H +I+  +  + C    C       S + +H +  H+ E  
Sbjct:   678 PFTCTQCGKSFSHASTLNQHMKIHTGEKPYMC--TQCGKGFNQSSDVIKHMRS-HTGEK- 733

Query:   687 APAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGK 746
              P  C  C +SF+  SNLN H   H   R ++CT C  +F+  S++ +H    H+  E  
Sbjct:   734 -PFTCTQCGKSFSQSSNLNKHMWSHTGERPYTCTQCGKSFSQSSDVTKHMW-SHTG-EKP 790

Query:   747 YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--- 803
             + C  CGKS+    +   H  +H   K  +T  C +C  +FR    L +HMK H+     
Sbjct:   791 FTCTQCGKSFSHSSNLNKHTMIHTGEKP-FT--CTQCGKSFRRSSHLNKHMKIHMTHTGE 847

Query:   804 --YRCTRCNKTFKQNTSFIRHSLKH 826
               Y CT+C K+F Q++    H   H
Sbjct:   848 RPYTCTQCGKSFSQSSHLSLHMQMH 872

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-110913-38 si:ch211-208f21.5 "si:ch211-208f21.5" [Danio rerio (taxid:7955)]

 Score = 1068 (381.0 bits), Expect = 4.9e-108, P = 4.9e-108
 Identities = 253/822 (30%), Positives = 376/822 (45%)

Query:    18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
             E+ + C  C K FSK + L +H+  H   +P  C  CG+ F      + H+   HT  K 
Sbjct:    62 EKPFTCTQCGKSFSKSSHLNKHMMSHTGEKPFTCTQCGKRFSQSSSRSKHM-MIHTGEKP 120

Query:    78 IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
               + C +C K++      + H   H  E    P       + C+ C     Y  H   H+
Sbjct:   121 --FTCTQCGKSFSQLSHLDLHMMIHTGEK---P-------FTCTQCGKSFNYLSHLNHHM 168

Query:   138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
              IH   KP+ C  CG +F+  SS + H  IHT  KP+ C  CG+SF   + + +H +  H
Sbjct:   169 MIHTGEKPFTCLQCGKSFSKSSSLNQHMRIHTGEKPFTCTQCGKSFSKSSSLNKH-MRIH 227

Query:   198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQLSNLQSHIRISHTGE 248
                + + C  C K +     L+ H+  H   KP+          Q S+L  H++  H GE
Sbjct:   228 TGEKPFTCTQCGKCFTCSSNLNQHMRIHTGEKPFICTQCGKSFSQSSSLNYHMKF-HAGE 286

Query:   249 RPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
             +PF C  C  +F +  HL  H+ +H G+ K F C  C    +   NL QH RIHT EKPF
Sbjct:   287 KPFTCTQCGKSFSQSSHLNKHMRIHTGE-KPFTCTQCGKCFTCSSNLNQHMRIHTGEKPF 345

Query:   309 NCSLCEKQFRQKIHVKNHLRIIHNMN--F-CDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
              C+ C K F Q   +  H++I H     F C  C K       LN  +H  +   +    
Sbjct:   346 ICTQCGKSFSQSTSLNYHMKI-HTGEKPFTCTQCGKSFSHSANLN--QHMII--HTGERP 400

Query:   366 LLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQC 425
              +C  CG   S L+    H++ H   K  S C  CG +F  + N  +HMR HTG KP+ C
Sbjct:   401 FMCTPCGKSFSQLSSFNQHMRIHTGEKLFS-CTQCGKSFSQSSNLILHMRIHTGEKPFTC 459

Query:   426 KTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICS 485
               C  S++    L  H   H+    F C  CGK F+    + +HM  H       C  C 
Sbjct:   460 TQCGKSFSQSSNLILHTRIHTGEKPFTCTQCGKSFSHSSSLNQHMMIHTGEKPFTCTQCG 519

Query:   486 QTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGII 545
             ++ + +  L +HM +H  +    C +C  SF+    L+ H +R H   K+ F C RCG  
Sbjct:   520 KSFSQSLSLNQHMKIHTGEKPFTCTKCGKSFNQSSYLNKH-MRIH-TGKRSFTCTRCG-- 575

Query:   546 NLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLC 605
               K   H  HLK    + +    E   Q       + +K+   IHMRIH + + F+C  C
Sbjct:   576 --KSFTHSSHLKK---HMKNHTAETLYQCSECGKSLANKSKLKIHMRIHNRVKLFTCTQC 630

Query:   606 NNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIF 665
               +F+  + L  H RIH   KP+ CT+C  S    SN   H RI+  +  F C  + C  
Sbjct:   631 GKSFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQSSNLNLHMRIHTGEKPFTC--SQCGK 688

Query:   666 STKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLN 725
             S    S L  H +I H+ E   P  C  C +SF+  S LN H   H   + F+C  C  +
Sbjct:   689 SFSQSSSLNLHMRI-HTGEK--PFTCTQCGKSFSQSSILNIHMRNHTGEKPFTCLQCGKS 745

Query:   726 FTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNA 785
             F+  + L +H RI H+  E  + C  CGKS+ +  +   H+ +H   K  +T  C +C  
Sbjct:   746 FSQSTYLNQHMRI-HTG-ENLFTCTQCGKSFSNSANLNLHMRIHTGEKP-FT--CTQCGK 800

Query:   786 TFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLK 825
             +F     L  HM+ H  +  + C++C K+F Q+  ++ H ++
Sbjct:   801 SFSQSSNLNIHMRIHTGEKPFTCSQCGKSFSQSP-YLNHHMR 841

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-157 si:ch211-245n8.1 "si:ch211-245n8.1" [Danio rerio (taxid:7955)]

 Score = 1068 (381.0 bits), Expect = 4.9e-108, P = 4.9e-108
 Identities = 259/825 (31%), Positives = 376/825 (45%)

Query:    18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
             E+ Y C  C K F  +  L  H+ IH   +P  C   G+ F   G L AH+R  HT  + 
Sbjct:    29 EKPYTCKQCGKSFYTIGNLTVHMRIHTGERPYACQKYGKSFYTTGNLAAHMRI-HTGEEP 87

Query:    78 IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
               Y C +C K+YK     E H  TH  E S          + C+ C      + + K H+
Sbjct:    88 --YSCLQCGKSYKQNGNLEVHMRTHTGERS----------FICTQCGKGFSQKQNLKIHM 135

Query:   138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRT-FNLMKRHNLCD 196
             RIH   KPY C  CG +F  K++ D H   HT  KP+ C  CG+SF T  +LM   N   
Sbjct:   136 RIHTGEKPYTCTECGKSFRCKNTLDHHMISHTGEKPFACAHCGKSFTTKASLMNHTNGHT 195

Query:   197 HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTG 247
                 + + C  C K++ +   L  H+  H   +PY             NL  H RI H+G
Sbjct:   196 GTTKKPFTCKQCGKSFYNTGNLTVHMRIHTGERPYTCQQCGKSFYSTGNLAVHRRI-HSG 254

Query:   248 ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
             ER + C  C  + K+  +LETH+  H G+ +SF C  C    S K NL  H RIHT EKP
Sbjct:   255 ERLYSCPQCGKSCKQNGNLETHMRTHTGE-RSFICTQCRKGFSQKQNLTIHMRIHTGEKP 313

Query:   308 FNCSLCEKQFRQKIHVKNHLRIIHNMN--F-CDHCFKFVGPEQELNIFRHCEVCDKSNNS 364
             + C+ C K F     +K+H+ I H     F C HC K    + +L I       +K    
Sbjct:   314 YTCTECGKGFPHTGSLKHHM-ISHTGQKPFACAHCGKSFTTKSKLKIHMIIHTGEKP--- 369

Query:   365 YLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQ 424
               +C +CG      + L  H++ H   K P  C  CG +F  +     HMR HTG KP+ 
Sbjct:   370 -FMCTQCGKSFRQASSLNKHMRIHTGEK-PFTCTQCGISFNCSSYLKQHMRIHTGEKPFT 427

Query:   425 CKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPV-CEI 483
             C  C  S+     L HH   H+    F C  CGK F +   + +H++ H    KP+ C +
Sbjct:   428 CTQCGRSFNRSSNLDHHMRIHTGEKPFTCTQCGKSFNRSSNLDQHIRIHTG-EKPITCTL 486

Query:   484 CSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCG 543
             C ++   +  L +HM  H  +    C +C  SFS     + H +R H  +K  F C +CG
Sbjct:   487 CGKSFRQSSSLSKHMRTHTGEKPFTCTQCGKSFSQSSNFNLH-MRIHTGEKP-FTCTQCG 544

Query:   544 IINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCL 603
                 +      H++   G       +  + F          ++ N H+RIH  ++P +C 
Sbjct:   545 KSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRS-------SHLNQHIRIHTGEKPITCT 597

Query:   604 LCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNC 663
              C  +F Q S+L  H RIH   KP+ CT+C  S    SN   H RI+  +    C    C
Sbjct:   598 QCGKSFRQSSSLYKHMRIHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKPITC--TQC 655

Query:   664 IFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCS 723
               S    S L +H +I H+ E   P  C  C +SF   S+LN H   H   +  +CT C 
Sbjct:   656 GKSFHQSSSLYKHMRI-HTGEK--PFTCTQCGKSFRQASSLNKHMRIHTGEKPITCTQCG 712

Query:   724 LNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKC 783
              +F   S+L +H RI H+  E  + C  CGKS+        H+ +H   K  +T  C +C
Sbjct:   713 KSFRQSSSLYKHMRI-HTG-EKPFTCTQCGKSFRQTSSLNKHMRIHTGEKP-FT--CTQC 767

Query:   784 NATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
               +F    +L +HM+ H  +  + CT+C ++F ++++   H   H
Sbjct:   768 GISFNCSSYLKQHMRIHTGEKPFTCTQCGRSFNRSSNLDHHMRIH 812

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110914-25 si:dkey-196n19.7 "si:dkey-196n19.7" [Danio rerio (taxid:7955)]

 Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
 Identities = 256/848 (30%), Positives = 386/848 (45%)

Query:    16 QDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSN 75
             +++  + C  C K  +  + LK H+ IH   +P  C  CG+ F     LN H+   HT  
Sbjct:     4 RNKNRFTCTQCGKSLANKSKLKIHMMIHTGEKPFTCTQCGKSFNRSSHLNQHM-MIHTGE 62

Query:    76 KKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKA 135
             K   + C +C K++       +H   H  E   + C  C   + CS          H   
Sbjct:    63 KP--FTCTQCGKSFNRSSHLNQHMMIHTGEKP-FTCTQCGKSFDCSS---------HLNR 110

Query:   136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLC 195
             H+RIH   KP+AC  CG +F   S  + H  IHT  KP+ C  C +SF     + RH + 
Sbjct:   111 HMRIHTGEKPFACTQCGKSFNCSSHLNQHMMIHTGEKPFTCTQCRKSFYCSFSLNRH-MR 169

Query:   196 DHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPY---------KQLSNLQSHIRISHT 246
              H   + + C  C K++     L+ H++ H   KP+          Q S+L  H+RI HT
Sbjct:   170 IHTGEKPFACTQCGKSFNCSSHLNQHMMIHTGEKPFTCTQCGKSFSQSSSLNQHVRI-HT 228

Query:   247 GERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEK 306
             GE+PF C  C  +F     L  H+ +H G+ K F C  C  S SL  +L  H RIHT+E+
Sbjct:   229 GEKPFTCTQCGKSFYRSFFLNQHMRIHTGE-KPFACTQCGKSFSLSTSLNYHMRIHTEER 287

Query:   307 PFNCSLCEKQFRQKIHVKNHLRIIHNMN--F-CDHCFKFVGPEQELNIFRHCEVCDKSNN 363
             PF C+ C K F +  ++  H+RI H     F C  C +       LN  +H  +   +  
Sbjct:   288 PFTCTQCGKSFIRSSYLNLHMRI-HTGEKPFTCSQCGRSFIQSSHLN--QHMRI--HTGE 342

Query:   364 SYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPY 423
                 C +CG   S+ + L  H++ H    +P  C  CG +F  +  +  HM+ HTG KP+
Sbjct:   343 KPFACTQCGKSFSLSSSLNYHMRIHT-DDRPFTCTRCGKSFTRSSTFIKHMKTHTGGKPF 401

Query:   424 QCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPV-CE 482
                 C  S+     L  H   H+    + C NC K F +L ++ K  KR     KP  C 
Sbjct:   402 TSTQCGKSFNQSPNLNEHMKIHTGERSYKCSNCDKRFNQLMHL-KTQKRIHTGEKPYSCT 460

Query:   483 ICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRC 542
              C ++      L+ HM +H  +    C +C  SFS     + H IR H  +K  F+C +C
Sbjct:   461 QCGRSFGRKGDLKIHMRIHTGEKPFTCTQCGKSFSHSSNFNQH-IRIHTGEKP-FICTQC 518

Query:   543 GIINLKRKYHVY-HLKYECG---YTRTL-PPELRRQFK---HDIVYMDSK---------- 584
             G  +  R  H+Y H+    G   +T TL      R F    H +++   K          
Sbjct:   519 GK-SFSRSSHLYRHMMIHTGEKQFTCTLCGKSFGRNFDPKIHMMIHTGEKPFTCTQCGNS 577

Query:   585 ----TNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVL 640
                 ++ N+HM IH  ++PF+C  C N+F++ S L  H  IH   KP+ CT+C  S    
Sbjct:   578 FIQSSSLNLHMMIHTGEKPFTCTQCGNSFSRSSHLNEHMMIHTGEKPFTCTQCK-SFNQS 636

Query:   641 SNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFAL 700
             SN   H++ + ++  F C    C+ +    S L +H  I H+ E   P  CK C +SF+ 
Sbjct:   637 SNLNNHKKTHTREKPFTC--TQCVKTFNCSSYLNQHMMI-HTGEK--PFTCKQCRKSFSQ 691

Query:   701 FSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKR 760
                L+ H   H + + ++C  C  +F  +     H RI H++ E  Y C  CGKS+    
Sbjct:   692 KPKLDVHMRVHTREQPYTCEQCGKSFGQIQGFKAHMRI-HTR-ERSYTCQQCGKSFYHAG 749

Query:   761 DYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTS 818
              +  H+ +H   K  ++  C +C  +F  K  L  HM+ H  +  Y C +C K+F Q  +
Sbjct:   750 HFAAHMRIHTGEKP-FS--CKQCGKSFSQKSNLDVHMRVHTGEKPYTCEQCGKSFSQKQN 806

Query:   819 FIRHSLKH 826
             F  H   H
Sbjct:   807 FKIHMRIH 814

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-121 si:ch211-162i8.3 "si:ch211-162i8.3" [Danio rerio (taxid:7955)]

 Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
 Identities = 255/846 (30%), Positives = 376/846 (44%)

Query:    18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
             E+ Y C  C K FS  +    H+ IH   +   C  CG+ F     LN H+R  HT  K 
Sbjct:    92 EKPYTCTQCGKSFSSSSHFNYHMRIHTGEKLFTCTQCGKSFSCSSSLNQHMRI-HTGEKP 150

Query:    78 IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
               + C +C K++     F  H   H  E   + C  C   +  S          H K H 
Sbjct:   151 --FTCLQCGKSFSKSSNFILHMMIHTGEKP-FKCTQCGKSFSQSS---------HLKHHT 198

Query:   138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
             RIH   KP+ C  C  +F+  S  + H  IHT  KP+ C  CG+SF   +    H +  H
Sbjct:   199 RIHSGEKPFTCTQCWKSFSRSSYLNQHMRIHTGEKPFTCTQCGKSFSQSSHFNYH-MRIH 257

Query:   198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQL---------SNLQSHIRISHTGE 248
                + + C  C K++    + + H+  H  +KP+  L         SN   H+ I HTGE
Sbjct:   258 TGDKLFTCTQCGKSFSCSSSFNQHMRIHTGVKPFTCLQCGKSFSKSSNFILHMMI-HTGE 316

Query:   249 RPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
             +PF+C  C  +F +  HL+ H  +H G+ K F C  C  S S    L QH RIHT EKPF
Sbjct:   317 KPFKCTQCGKSFSQSSHLKHHTRIHSGE-KPFTCTQCGKSFSRSSYLNQHMRIHTGEKPF 375

Query:   309 NCSLCEKQFRQKIHVKNHLRIIHNMN--F-CDHCFKFVGPEQELNIFRHCEVCDKSNNSY 365
              C+ C K F Q  H+ +H+RI H     F C  C K        N        DK     
Sbjct:   376 TCTQCGKSFSQSSHLNHHMRI-HTGEKPFTCTQCGKSFSQSSHFNYHMRIHTGDK----L 430

Query:   366 LLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQC 425
               C +CG   S  +    H++ H   K P  C  CG +F  + N+ +HM  HTG KP++C
Sbjct:   431 FTCTQCGKSFSCSSSFNQHMRIHTGVK-PFTCLQCGKSFSKSSNFILHMMIHTGEKPFKC 489

Query:   426 KTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICS 485
               C  S++    L+HH   HS    F C  CGK F++  Y+ +HM+ H       C  C 
Sbjct:   490 TQCGKSFSQSSHLKHHTRIHSGEKPFTCTQCGKSFSRSSYLNQHMRIHTGEKPFTCTQCG 549

Query:   486 QTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGII 545
             ++ + +  L  HM +H  +    C +C  SFS    L+ H +R H  +K  F C +    
Sbjct:   550 KSFSQSSHLNHHMRIHTGEKPFTCTQCGKSFSRSSYLNQH-MRIHTGKKP-FTCTKQRRK 607

Query:   546 NLKRKYHVY-HLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLL 604
             +  +K ++  H++    +TR  P    +  K        K +   HMRIH  +RP++C  
Sbjct:   608 SFIQKRNLGDHMRV---HTREKPYTCEQCGKS----FGKKRSLKTHMRIHTGERPYTCQQ 660

Query:   605 CNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCI 664
             C  +F Q+ TL  H RIH   +PY C +C  S +  +    H R +  +  + C    C 
Sbjct:   661 CGKSFKQIGTLKGHMRIHTGERPYTCQQCGKSFKQSATLKGHMRSHTGERPYTCQ--QCG 718

Query:   665 FSTKFYSCLRRHRKIFHSNESYAPAKC---------------------KICNQSFALFSN 703
              S  +      H++I    + Y   +C                      +C +SFA    
Sbjct:   719 QSFYYAGNFAAHKRIHTGEKPYTCQQCGKSFKQSGTLKGHIRTHNGGKTLCGKSFAQKQK 778

Query:   704 LNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYT 763
             L+     H   + ++CT C  +FT  S+LI H +  H++ E  + CN C KS+  K +  
Sbjct:   779 LDTDMMIHTGEKPYTCTECGKSFTCKSSLINHMKT-HTR-EKLFACNQCEKSFTCKANLM 836

Query:   764 NHVSVHMERKSGYTQR-CHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFI 820
             NH+  H    SG     C +C  +   K ++ +HMKTH  +  +RC+ C K+FKQ  +  
Sbjct:   837 NHMDGH----SGIIVFICDQCGKSLTRKDYIKQHMKTHSREDRFRCSECGKSFKQKINLS 892

Query:   821 RHSLKH 826
              H   H
Sbjct:   893 AHMKLH 898

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-071004-104 zgc:173517 "zgc:173517" [Danio rerio (taxid:7955)]

 Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
 Identities = 245/827 (29%), Positives = 383/827 (46%)

Query:    19 RTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKI 78
             + + C  C K F + + L  H+ IH   +P  C  CG+ F     L  H++  HT  K  
Sbjct:     1 KPFTCTQCGKSFRESSNLNNHMRIHTGEKPFTCTQCGKSFRVSSNLKKHMKI-HTGEKT- 58

Query:    79 YYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLR 138
              +KCD+C KT+      + H   H  E    P       YPCS C      +   + H +
Sbjct:    59 -HKCDQCGKTFLRASHLKSHLRVHTKEK---P-------YPCSVCGKNFTRQESLRNHQK 107

Query:   139 IHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQ 198
             IH  +  Y C  C   F    +   H+ IHT  KPY+C  C +SF  F  MK H    H 
Sbjct:   108 IHTGVGEYRCFECNKTFCRAENLKIHERIHTGEKPYICSLCNKSFNQFAHMKTHARV-HT 166

Query:   199 DVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTGER 249
               + Y C++C K + D   L  H+  H   KPYK          L NL+ H RI HTGE+
Sbjct:   167 GEKPYKCSYCEKRFTDSGDLRKHVRVHTGEKPYKCSDCDKRFSDLGNLRKHERI-HTGEK 225

Query:   250 PFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFN 309
             P+ C +C+  F +  +L+ HV ++ G+ K + C+ C+   S   NL QH R+HT EKP+ 
Sbjct:   226 PYICSHCDKRFSDLGNLKKHVRIYTGE-KPYKCSYCDKRFSDSGNLRQHERVHTGEKPYK 284

Query:   310 CSLCEKQFRQKIHVKNHLRIIHNMNF---CDHCF-KFVGPEQELNIFRHCEVCDKSNNSY 365
             CS C+K+F    +++ H +I H       C HC  K +  +Q L    H  +   +    
Sbjct:   285 CSHCDKRFSDSGNLRQHEKI-HTGEKPYKCSHCCGKSLTNKQSLK--SHMRI--HTGEKP 339

Query:   366 LLCWKCGFKTSV-LNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQ 424
               C +CG KT +  + LK+H++ H   K P  C+VCG +FK   +   H + HTG + Y+
Sbjct:   340 FTCTQCG-KTFLRASHLKSHLRVHTKEK-PYPCSVCGKSFKHQRSLRNHQKIHTGVREYK 397

Query:   425 CKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEIC 484
             C  C  ++ +   L+ H+  H+    + C  C   F +  +M  H + H       C  C
Sbjct:   398 CFECEKTFCTAESLKIHKRIHTGEKPYICSLCNNRFNQFAHMKTHARVHTGEKPYKCSHC 457

Query:   485 SQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGI 544
              +  + +  L++H  +H  +  + C+ C+  F  +  L  H+ R H  +K    C +CG 
Sbjct:   458 DKRFSDSGNLRQHEKIHTGEKPYKCSHCDTRFRQLGGLKTHE-RIHTGEKTH-KCDQCGK 515

Query:   545 INLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLL 604
               L+      HL+      +  P  +  +   +    +S  N   H +IH     + C  
Sbjct:   516 TFLRASQLKSHLRVHTK-KKLYPCSVCGK---NFTRQESLRN---HQKIHTGVGEYRCFE 568

Query:   605 CNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCI 664
             CN +F +   L  H R+H   KPYKC+ C+       N   HE+I+  +  +KC  ++C 
Sbjct:   569 CNKSFCRAENLKIHARVHTGEKPYKCSHCDKKFSDSGNLRRHEKIHTGEKPYKC--SHC- 625

Query:   665 FSTKFYSC--LRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNC 722
               T+F     L+ H +  H+ E   P  C  C +S A   +L  H   H   + F+C+ C
Sbjct:   626 -DTRFRQLGGLKTHERT-HTGEK--PFTCTQCGKSLASKQSLGYHMRVHTGEKPFTCSQC 681

Query:   723 SLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHK 782
               +F   + LI+H RI H+  E  + C+ CG S+ D  +   H+  H  +K     RC +
Sbjct:   682 GKSFRESAKLIKHMRI-HTG-EKPFTCSQCGMSFTDSSNLGRHMLTHTRKKK---HRCDQ 736

Query:   783 CNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIR-HSLKH 826
             C  TF I+ +L RH++TH  +  Y C+ C  +F +    +R H+  H
Sbjct:   737 CGKTFLIESYLKRHLRTHTKEKPYPCSVCGNSFTRQAVHLRTHARIH 783

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-110914-160 si:dkey-240n22.7 "si:dkey-240n22.7" [Danio rerio (taxid:7955)]

 Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
 Identities = 256/848 (30%), Positives = 375/848 (44%)

Query:    18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
             E+ + C  C K FS+  TLK H+ IH   +P  C +CG+ F D   L  H+R  HT +K 
Sbjct:    60 EKPFTCQQCGKSFSQKQTLKVHMRIHTGEKPFSCHHCGKTFTDKQNLMVHMRI-HTGDKP 118

Query:    78 IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
               Y C  C K +  K   + H   H  E    P       Y C  C      + + + H+
Sbjct:   119 --YICTVCGKNFSQKPSLDVHVGIHTGEK---P-------YQCQQCGKSFNRKQNLQVHM 166

Query:   138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
              IH   KPY C+ CG +F  K +   H  IHT  KP+ C  CG+SF     +  H    H
Sbjct:   167 SIHSGDKPYQCQQCGKSFNRKQNLQVHMRIHTGEKPFSCHQCGKSFSQKRNLAIHRRI-H 225

Query:   198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTGE 248
                R Y C  C K++  ++ L  H+  H   KPY+            +L+ H+RI HTG+
Sbjct:   226 TGERPYTCQQCGKSFTQKQNLKVHMRIHTGDKPYQCQECGKSFIDKQHLKVHMRI-HTGD 284

Query:   249 RPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
             +P+QC+ C  +F  K + + H+ +H  K K F+C+ C  S + K NL  H R+HT +KP+
Sbjct:   285 KPYQCQQCGKSFNRKQNFQVHMRIHT-KEKPFSCHQCGRSFNRKQNLKVHMRVHTGDKPY 343

Query:   309 NCSLCEKQFRQKIHVKNHLRIIHNMN-F-CDHCFKFVGPEQELNIFRHCEVCDKSNNSYL 366
              C  C K F QK  +  H+R    +N F C  C K  G +Q+L +  H  +   S     
Sbjct:   344 QCQQCGKSFSQKATLDAHMRTHSGLNAFTCQQCGKSFGQKQKLQL--HMRI--HSREKPY 399

Query:   367 LCWKCGFKTSVLNELKAHIKSH---HFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPY 423
              C  CG   S     KAH+  H   H  ++P  C  CG  F    N  +H+R H+G KPY
Sbjct:   400 KCQHCGESFSQ----KAHLTGHERVHTKEKPYTCLQCGKCFSLKQNLKLHVRIHSGEKPY 455

Query:   424 QCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEI 483
             QC+ C  S+     L  H   H+    F C  CGK F +   +  HM+ H       C+ 
Sbjct:   456 QCQHCGKSFNQRSHLTGHTRIHTGEKPFSCQQCGKSFAQQTNLKVHMRVHTRERPYTCQD 515

Query:   484 CSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCG 543
             C +   H Q L+ HM +H  +  + C +C  SFS    L  H +  H      F+C +CG
Sbjct:   516 CGKRFFHKQNLKVHMRVHTGEKPYVCQQCGKSFSQKTNLDAH-MGTHSVVNP-FICQQCG 573

Query:   544 II-----NLK--RKYHVYHLKYECGYT-RTLP--PELRRQFK-H--DIVY---------- 580
                    NLK   + H     Y CG   ++    P L+   + H  +  Y          
Sbjct:   574 KSFGHKQNLKIHMRVHTGEKPYSCGQCGKSFRQYPSLKIHVRIHTGEKPYTCQCCDCGKS 633

Query:   581 MDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVL 640
              + K N  +H RIH  ++P+ C  C  +F+Q   L  H  +H    P+ C +C  S    
Sbjct:   634 FNYKQNLEVHRRIHTGEKPYQCRQCGKSFSQKIQLEGHMGVHTGVNPFTCQQCGKSFNRK 693

Query:   641 SNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFAL 700
              N   H R++  +  ++C    C  S      L  H  + H+  +  P  C+ C +SF  
Sbjct:   694 QNLKVHIRVHTGEKPYQCQ--QCGKSFSQQKNLDSHL-VIHTGAN--PFVCQQCGKSFNH 748

Query:   701 FSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKR 760
               NL  H   H   + + C  C  +F+  ++L  H  I H+  +    C  CGKS+I K+
Sbjct:   749 KQNLQVHMRIHTGEKPYQCRQCGRSFSQKTHLEAHIGI-HTGGDKPNQCQQCGKSFIHKQ 807

Query:   761 DYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTH--LIQYRCTRCNKTFKQNTS 818
             +   H+ VH   K  Y   C  C  +F  +  L  HM+ H  +  + C  C K+F    +
Sbjct:   808 NLKVHMRVHTGEKP-Y--HCQHCGKSFSQQTNLEGHMRIHSGVKPFTCQECGKSFVHKHN 864

Query:   819 FIRHSLKH 826
                H   H
Sbjct:   865 LQLHLRVH 872

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1MJE7 F1MJE7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
 Identities = 260/847 (30%), Positives = 375/847 (44%)

Query:    18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
             ++ Y C  C K F   ++L RH  IH   +P +C  CG+ F     L  H +  HT  K 
Sbjct:   192 QKPYKCDECGKAFRLKSSLLRHQTIHTGQKPYKCDDCGKAFHAKSALLTH-QTIHTGQKP 250

Query:    78 IYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
               YKCD+C K + +K    RH+  H  E    P       Y C  C    R +    +H 
Sbjct:   251 --YKCDECGKAFCAKSVLSRHQTIHTGEK---P-------YKCDECGKAFRLKSFLLSHQ 298

Query:   138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
              +H   KPY C  CG AF  KSS   HQ I T  KP+ C  CG+ F   + +  H    H
Sbjct:   299 TVHTGEKPYKCDECGKAFRLKSSLLRHQTIDTGQKPHKCDDCGKVFHAKSALLTHQTI-H 357

Query:   198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYK--------QLSN-LQSHIRISHTGE 248
                + Y C+ C K +  +  L  H   H   KPYK        +L + L SH R+ HTGE
Sbjct:   358 TGQKPYKCDECGKAFCAKSVLARHQTIHTGEKPYKCDECGKAFRLKSILLSHQRV-HTGE 416

Query:   249 RPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
             +P++C  C  AF +  +   H  +H G+ K + C+ C  +  +K  L+ H  +HT EKP+
Sbjct:   417 KPYKCGECGKAFADSSYFRRHQKIHTGE-KPYECDECGKAFRVKSILLSHQTVHTGEKPY 475

Query:   309 NCSLCEKQFRQKIHVKNHLRIIHNMNF--CDHCFKFVGPEQELNIFRHCEVCDKSNNSYL 366
              C  C K F  + H++ H +I        CD C K     ++L    H  V   S     
Sbjct:   476 KCDECGKAFTDRSHLRRHQKIHTGQKLFKCDICDKVFRRSKQLA--GHQSV--HSGEKPY 531

Query:   367 LCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCK 426
              C +CG    V + L  H ++ H  ++P  C  CG  F    +   H + HTG KPY+C 
Sbjct:   532 KCDECGKAFRVKSILLIH-QTVHTGEKPYKCDECGKAFTDRSHLRRHQKIHTGEKPYKCD 590

Query:   427 TCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQ 486
              C  ++     L  H+  H+    + C  CGK F    +++ H   H       C+ C +
Sbjct:   591 ECGKAFRVKSTLLRHQTVHTGEKPYKCDACGKVFRVKSFLLCHQTIHTGQKPYKCDECGK 650

Query:   487 TMAHNQVLQ--RHMTLHFTQNKHPCNRCNASFS-SMVQLSCHQIRAHGKQKQRFMCHRCG 543
                 NQ  Q   H  LH  +  + C+ C  +F  ++  +S HQ   H  +K  + C  CG
Sbjct:   651 AFRVNQPSQFLTHKRLHTGEKPYKCDECGKAFRRNLSNVSSHQT-VHTGEKP-YKCDECG 708

Query:   544 -------IINLKRKYHVYHLKY---ECGYTRTLPPELRRQ---------FKHDI---VYM 581
                    I+   +  H     Y   ECG T T    LRR          FK DI   V+ 
Sbjct:   709 KAFRVKSILLSHQTVHTGEKPYKCDECGKTFTHSSNLRRHQKIHTGQKLFKCDICDKVFS 768

Query:   582 DSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLS 641
              S+     H  +H  ++P+ C  C   F   S LL H+ +H   KPYKC +C  +    S
Sbjct:   769 RSEQLAG-HQSVHSGEKPYKCDECGKAFRVKSILLRHQTVHTGEKPYKCDECGKAFTHSS 827

Query:   642 NKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALF 701
             N   H++I+    +FKC I + +FS   +  L  H+ + HS     P KC  C+++F + 
Sbjct:   828 NLRRHQKIHTGQKLFKCDICDKVFSRSEH--LAGHQSV-HSGAK--PYKCDECDKAFRVK 882

Query:   702 SNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRD 761
             S L  H   H   + + C  C   FT+ SNL RH++I   Q   K  C+ C K +     
Sbjct:   883 SILLIHQTVHTGEKPYKCEECGKAFTHSSNLRRHQKIHTGQKLFK--CDICDKVFNRSEQ 940

Query:   762 YTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSF 819
                H SVH   K  Y  +C +C   FR+K  L RH   H  +  Y+C  C K F+  ++ 
Sbjct:   941 LAGHQSVHSGEKP-Y--KCDECGKAFRVKSILLRHQTVHTGEKPYKCDECGKAFRVKSTL 997

Query:   820 IRHSLKH 826
             +RH   H
Sbjct:   998 LRHQTVH 1004

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A8MQ14	ZN850_HUMAN	No assigned EC number	0.3111	0.9174	0.7036	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	836
KOG1074|consensus	958		99.95
KOG1074|consensus	958		99.95
KOG3608|consensus	467		99.94
KOG3608|consensus	467		99.93
KOG2462|consensus	279		99.92
KOG2462|consensus	279		99.91
KOG3623|consensus	1007		99.88
KOG3623|consensus	1007		99.84
KOG3576|consensus	267		99.62
KOG3576|consensus	267		99.57
PHA00733	128	hypothetical protein	99.04
PLN03086	567	PRLI-interacting factor K; Provisional	99.01
PHA02768	55	hypothetical protein; Provisional	98.99
PLN03086	567	PRLI-interacting factor K; Provisional	98.97
PHA00733	128	hypothetical protein	98.79
PHA02768	55	hypothetical protein; Provisional	98.78
KOG1146|consensus	1406		98.71
KOG1146|consensus	1406		98.69
KOG3993|consensus	500		98.56
KOG3993|consensus	500		98.53
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.48
PHA00732	79	hypothetical protein	98.36
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.35
PHA00616	44	hypothetical protein	98.3
PHA00616	44	hypothetical protein	98.3
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.07
PHA00732	79	hypothetical protein	98.07
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.86
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.72
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.62
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.29
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.19
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.17
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.12
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.11
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.01
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.0
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.98
KOG2231|consensus	669		96.72
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.63
KOG2231|consensus	669		96.59
smart00355	26	ZnF_C2H2 zinc finger.	96.43
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.37
smart00355	26	ZnF_C2H2 zinc finger.	96.06
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.67
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.6
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.58
KOG2482|consensus	423		95.21
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.13
PRK04860	160	hypothetical protein; Provisional	95.05
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.88
PRK04860	160	hypothetical protein; Provisional	94.79
COG5048	467	FOG: Zn-finger [General function prediction only]	94.71
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.67
KOG2482|consensus	423		94.41
KOG2785|consensus	390		94.36
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.22
KOG2785|consensus	390		94.04
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.01
COG5048	467	FOG: Zn-finger [General function prediction only]	92.43
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.36
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.08
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.95
KOG4173|consensus	253		90.54
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	89.61
KOG2893|consensus	341		89.08
KOG4173|consensus	253		88.72
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	87.68
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	87.64
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	87.19
KOG2893|consensus	341		84.45
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	80.35

>KOG1074|consensus

Probab=99.95  E-value=7.4e-30  Score=266.68  Aligned_cols=230  Identities=18%  Similarity=0.319  Sum_probs=164.3

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcc----cccc---CCCccccccch
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHV----FKCH---INNCIFSTKFY  670 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----~~C~---~c~c~~~~~~~  670 (836)
                      .|-+|-+|-+...=++.|+.|.|+|+||+||+|.+||+.|.++.+|+.|+.+|....+    +.|+   +  |...|...
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~i--c~~kftn~  681 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFI--CQKKFTNA  681 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhh--hccccccc
Confidence            4689999999999999999999999999999999999999999999999999976644    5566   6  44444444


Q ss_pred             hHHHhhhhhcccCCC----------CCCcccccchHhhhchhHHHHHHHHhcCc----------------C----cccCC
Q psy6556         671 SCLRRHRKIFHSNES----------YAPAKCKICNQSFALFSNLNAHYNKHLKV----------------R----RFSCT  720 (836)
Q Consensus       671 ~~l~~H~~~~~~~~~----------~~~~~C~~C~~~f~~~~~L~~H~~~h~~~----------------~----~~~C~  720 (836)
                      -.|..|+++|.++..          ...-+|..|.+.|.....+..++-.|.+.                .    ++.+.
T Consensus       682 V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~  761 (958)
T KOG1074|consen  682 VTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPEN  761 (958)
T ss_pred             ccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccc
Confidence            668888887763321          11246888888888878888777766221                2    46677


Q ss_pred             cccccccCchhHHHHHHhh--c-------------------CCCCCce-ecCcccccccchhhhhhHH------------
Q psy6556         721 NCSLNFTYLSNLIRHRRIK--H-------------------SQHEGKY-VCNYCGKSYIDKRDYTNHV------------  766 (836)
Q Consensus       721 ~C~~~f~~~~~L~~H~~~~--h-------------------~~~~~~~-~C~~C~~~f~~~~~l~~H~------------  766 (836)
                      .|+..+.....+..+-...  +                   ...+++. .+..++..-.....+.-=+            
T Consensus       762 ~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~  841 (958)
T KOG1074|consen  762 SCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGL  841 (958)
T ss_pred             ccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccc
Confidence            7877777666555443322  0                   0123444 5666665443332221000            


Q ss_pred             ------HhhcccC---------------------CCCccccCccchhcccchhHHHHHhhcCC--CccCCccchhcccch
Q psy6556         767 ------SVHMERK---------------------SGYTQRCHKCNATFRIKKFLTRHMKTHLI--QYRCTRCNKTFKQNT  817 (836)
Q Consensus       767 ------~~H~~~~---------------------~~~~~~C~~C~~~F~~~~~L~~H~~~h~~--~~~C~~C~~~f~~~~  817 (836)
                            .++.+.+                     .+....|.+||+.|.+.+.|++||+||++  ||.|.+|++.|..+.
T Consensus       842 ~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrg  921 (958)
T KOG1074|consen  842 ATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRG  921 (958)
T ss_pred             ccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhh
Confidence                  0000000                     01125799999999999999999999986  899999999999999


Q ss_pred             hhhhccccccCC
Q psy6556         818 SFIRHSLKHFNS  829 (836)
Q Consensus       818 ~l~~H~~~H~~~  829 (836)
                      +|+.||.+|.--
T Consensus       922 nLKvHMgtH~w~  933 (958)
T KOG1074|consen  922 NLKVHMGTHMWV  933 (958)
T ss_pred             hhhhhhcccccc
Confidence            999999999853

>KOG1074|consensus

Probab=99.95  E-value=2.9e-28  Score=254.89  Aligned_cols=294  Identities=18%  Similarity=0.252  Sum_probs=161.0

Q ss_pred             ccccCCCCCCccCChHHHHHHHhhcCCCCCcccccchhhcCChhHHHchHhhhcCCCcccccccccCccccccccccccc
Q psy6556         278 KSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEV  357 (836)
Q Consensus       278 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (836)
                      .+-+|-+|-+..+-++.|+.|+++|+||+||+|.+|++.|.++.+|+.|+-. |...                       
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~v-Hka~-----------------------  659 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSV-HKAK-----------------------  659 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccc-cccC-----------------------
Confidence            4578999999999999999999999999999999999999999999999976 3210                       


Q ss_pred             cCCCCCCeeecCcCCCcccCHHHHHHHHhhccCCCCCcccc---cchHhhcChhhHHHHhhhcCCC-------------C
Q psy6556         358 CDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICA---VCGDTFKTNYNYFVHMRRHTGF-------------K  421 (836)
Q Consensus       358 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~C~---~C~~~f~~~~~l~~H~~~h~~~-------------~  421 (836)
                                                     +.-..++.|+   +|.+.|.+...|..|+++|.+.             -
T Consensus       660 -------------------------------p~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~~s~g~~a~e~~~~  708 (958)
T KOG1074|consen  660 -------------------------------PPARVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQISNGGTAAEGILA  708 (958)
T ss_pred             -------------------------------ccccccccCCchhhhcccccccccccceEEeecCCCCCCCcccccccch
Confidence                                           0012345566   6666666666666666666521             1


Q ss_pred             ccccCcchhhccChhHHHHHHhhh----------------cCCC----cccccccccccCCHHHHHHHHhhhcCCCcccc
Q psy6556         422 PYQCKTCNASYASMRVLQHHEITH----------------SKTL----KFPCINCGKYFTKLEYMIKHMKRHFNTNKPVC  481 (836)
Q Consensus       422 ~~~C~~C~~~f~~~~~L~~H~~~h----------------~~~~----~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  481 (836)
                      .-+|..|.+.|.....+..++..|                +++.    +..+..|+..+.....+..+--.+......  
T Consensus       709 adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~--  786 (958)
T KOG1074|consen  709 ADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGRELEGEMAISVRGSTEEASANL--  786 (958)
T ss_pred             hcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccccccccCcccccccccchhhhhcCh--
Confidence            135667777776666666665544                2222    445566666655554443332211000000  


Q ss_pred             ccchhcccChHHHHHHHhhhcCCCcc-cCccccccccChHHHHHHHHHHhCCCCCceecCCCCccccccccccccccccc
Q psy6556         482 EICSQTMAHNQVLQRHMTLHFTQNKH-PCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYEC  560 (836)
Q Consensus       482 ~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~~~~~~~~~~h~~~~~  560 (836)
                         ...+.....=..+....+++++. .+.+++..-.......-    .-.+              .....+..-+..+ 
T Consensus       787 ---~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~p----vl~~--------------~~~~~l~eg~~t~-  844 (958)
T KOG1074|consen  787 ---DEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDP----VLWN--------------QETSMLNEGLATK-  844 (958)
T ss_pred             ---hhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCc----hhhc--------------ccccccccccccc-
Confidence               00000011111122223344444 33333332211110000    0000              0000000000000 


Q ss_pred             CCccCCChhhhhccccceeccccchhhhhhhhhhc--CCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhc
Q psy6556         561 GYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHG--KDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSAR  638 (836)
Q Consensus       561 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~  638 (836)
                       .....+++..     +.+.......+..-..--.  ......|.+||+.|.+.++|..|+|+|+++|||.|.+|++.|.
T Consensus       845 -~n~~t~~~~~-----~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFt  918 (958)
T KOG1074|consen  845 -TNEITPEGPA-----DSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFT  918 (958)
T ss_pred             -cccccCCCcc-----hhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhh
Confidence             0000000000     0000000000000000000  1122679999999999999999999999999999999999999


Q ss_pred             chhhHHHHhhhhccCccc
Q psy6556         639 VLSNKLAHERIYHQDHVF  656 (836)
Q Consensus       639 ~~~~l~~H~~~h~~~~~~  656 (836)
                      ++.+|+.||..|.+..++
T Consensus       919 trgnLKvHMgtH~w~q~~  936 (958)
T KOG1074|consen  919 TRGNLKVHMGTHMWVQPP  936 (958)
T ss_pred             hhhhhhhhhccccccCCC
Confidence            999999999999877654

>KOG3608|consensus

Probab=99.94  E-value=5.3e-27  Score=220.44  Aligned_cols=237  Identities=24%  Similarity=0.455  Sum_probs=168.8

Q ss_pred             cccccccCCHHHHHHHHhhhcC-----------C--Cccccc--cchhcccChHHHHHHHhhhcCCCcccCccccccccC
Q psy6556         454 INCGKYFTKLEYMIKHMKRHFN-----------T--NKPVCE--ICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSS  518 (836)
Q Consensus       454 ~~C~~~f~~~~~l~~H~~~h~~-----------~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  518 (836)
                      ..|+..|.+...+..|+-.|.-           +  ..+.|.  .|-+.|.+++.|++|++.|++++...|+.|+.-|.+
T Consensus       140 edCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~  219 (467)
T KOG3608|consen  140 EDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRT  219 (467)
T ss_pred             hhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhcc
Confidence            3455555555555555544421           0  112342  355566666666666666666666666666666666


Q ss_pred             hHHHHHHHHHHhCCCCCceecCCCCcccccccccccccccccCCccCCChhhhhccccceeccccchhhhhhhhhhcCCC
Q psy6556         519 MVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDR  598 (836)
Q Consensus       519 ~~~L~~H~~~~h~~~~~~~~C~~C~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~h~~~~  598 (836)
                      +..|-.|.++.......+|+|..|.+.|                                   ..+..|..|++.|-  .
T Consensus       220 ~tkl~DH~rRqt~l~~n~fqC~~C~KrF-----------------------------------aTeklL~~Hv~rHv--n  262 (467)
T KOG3608|consen  220 KTKLFDHLRRQTELNTNSFQCAQCFKRF-----------------------------------ATEKLLKSHVVRHV--N  262 (467)
T ss_pred             ccHHHHHHHhhhhhcCCchHHHHHHHHH-----------------------------------hHHHHHHHHHHHhh--h
Confidence            6666666655555555556666665543                                   23333444555443  2


Q ss_pred             CcccccchHhhcCchhHHhhhhh-cCCCccccCCccchhhcchhhHHHHhhhhccCccccccCCCccccccchhHHHhhh
Q psy6556         599 PFSCLLCNNTFAQLSTLLNHERI-HDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHR  677 (836)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~c~~~~~~~~~l~~H~  677 (836)
                      -|+|+.|+.+....+.|..|++. |..++||+|+.|++.|.+.++|.+|..+|. +..|+|..-+|.+++.++..|++|+
T Consensus       263 ~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~  341 (467)
T KOG3608|consen  263 CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHF  341 (467)
T ss_pred             cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHH
Confidence            48899999999999999999874 788999999999999999999999999665 8899999999999999999999999


Q ss_pred             hhcccCCCCCCcccccchHhhhchhHHHHHHHHhcC------cCcccCCcccccccC
Q psy6556         678 KIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLK------VRRFSCTNCSLNFTY  728 (836)
Q Consensus       678 ~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~------~~~~~C~~C~~~f~~  728 (836)
                      +.+|.+....+|+|..|++.|++..+|..|+.+-++      -+.|.=.+|.-+|..
T Consensus       342 ~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~mR  398 (467)
T KOG3608|consen  342 LEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSGHKRFTYKVDEDGFMR  398 (467)
T ss_pred             HHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCCCCCCceeeeeccCceee
Confidence            999988888899999999999999999999876544      345555566555543

>KOG3608|consensus

Probab=99.93  E-value=3.5e-25  Score=208.27  Aligned_cols=190  Identities=25%  Similarity=0.505  Sum_probs=129.6

Q ss_pred             cccc--cchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCCCccccccchhHHHhhh
Q psy6556         600 FSCL--LCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHR  677 (836)
Q Consensus       600 ~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~c~~~~~~~~~l~~H~  677 (836)
                      +.|.  .|.+.|.+++.|++|+|.|+++|...|+.||.-|+++..|..|.+.-+..                        
T Consensus       178 ~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l------------------------  233 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTEL------------------------  233 (467)
T ss_pred             eeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhh------------------------
Confidence            4454  58888889999999999999998888999998888888888887754321                        


Q ss_pred             hhcccCCCCCCcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCccccccc
Q psy6556         678 KIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYI  757 (836)
Q Consensus       678 ~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~  757 (836)
                           +.  .+|.|..|.|.|.+...|..|+++|.  .-|+|+.|+.+-...+.|.+|++..|+. ++||+|+.|++.|.
T Consensus       234 -----~~--n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~-dkpfKCd~Cd~~c~  303 (467)
T KOG3608|consen  234 -----NT--NSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSK-DKPFKCDECDTRCV  303 (467)
T ss_pred             -----cC--CchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhcc-CCCccccchhhhhc
Confidence                 11  35666666666666666666666663  3566666666666666666666666654 66666666666666


Q ss_pred             chhhhhhHHHhhcccCCCCccccCc--cchhcccchhHHHHHhhcC-C----CccCCccchhcccchhhhhcccccc
Q psy6556         758 DKRDYTNHVSVHMERKSGYTQRCHK--CNATFRIKKFLTRHMKTHL-I----QYRCTRCNKTFKQNTSFIRHSLKHF  827 (836)
Q Consensus       758 ~~~~l~~H~~~H~~~~~~~~~~C~~--C~~~F~~~~~L~~H~~~h~-~----~~~C~~C~~~f~~~~~l~~H~~~H~  827 (836)
                      +.++|.+|+-+|+..    .|+|+.  |..+|.+...|.+||+.+. +    +|.|-.|++.|++-.+|.+|+.+-+
T Consensus       304 ~esdL~kH~~~HS~~----~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  304 RESDLAKHVQVHSKT----VYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKH  376 (467)
T ss_pred             cHHHHHHHHHhcccc----ceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhh
Confidence            666666666666522    266655  6666666666666666553 2    5666666666666666666655443

>KOG2462|consensus

Probab=99.92  E-value=1.1e-25  Score=207.44  Aligned_cols=136  Identities=27%  Similarity=0.564  Sum_probs=104.7

Q ss_pred             cccCCccchhhcchhhHHHHhhhhccCccccccCCCccccccchhHHHhhhhhcccCCCCCCcccccchHhhhchhHHHH
Q psy6556         627 PYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNA  706 (836)
Q Consensus       627 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~c~~~~~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~  706 (836)
                      .|+|+.|++.+.+.++|.+|...|                              -..++.+.+.|++|||.|.+...|+.
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H------------------------------~~~~s~ka~~C~~C~K~YvSmpALkM  179 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTH------------------------------RSLDSKKAFSCKYCGKVYVSMPALKM  179 (279)
T ss_pred             ceeccccccccccccccchhhccc------------------------------ccccccccccCCCCCceeeehHHHhh
Confidence            466666666666666666665544                              22233366788888888888888888


Q ss_pred             HHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCCCCccccCccchh
Q psy6556         707 HYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNAT  786 (836)
Q Consensus       707 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~  786 (836)
                      |+++|+  -+++|.+|||.|.....|+-|+|+|+  ||+||.|+.|++.|.++++|+.||.+|.+.+   +|+|..|+|+
T Consensus       180 HirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHT--GEKPF~C~hC~kAFADRSNLRAHmQTHS~~K---~~qC~~C~Ks  252 (279)
T KOG2462|consen  180 HIRTHT--LPCECGICGKAFSRPWLLQGHIRTHT--GEKPFSCPHCGKAFADRSNLRAHMQTHSDVK---KHQCPRCGKS  252 (279)
T ss_pred             HhhccC--CCcccccccccccchHHhhccccccc--CCCCccCCcccchhcchHHHHHHHHhhcCCc---cccCcchhhH
Confidence            888885  57888888888888888888888887  5888888888888888888888888888777   4888888888


Q ss_pred             cccchhHHHHHhh
Q psy6556         787 FRIKKFLTRHMKT  799 (836)
Q Consensus       787 F~~~~~L~~H~~~  799 (836)
                      |..++.|.+|...
T Consensus       253 Fsl~SyLnKH~ES  265 (279)
T KOG2462|consen  253 FALKSYLNKHSES  265 (279)
T ss_pred             HHHHHHHHHhhhh
Confidence            8888888888653

>KOG2462|consensus

Probab=99.91  E-value=3.3e-25  Score=204.38  Aligned_cols=134  Identities=31%  Similarity=0.569  Sum_probs=119.7

Q ss_pred             CCCcccccchHhhcChhhHHHHhhhcCC---CCccccCcchhhccChhHHHHHHhhhcCCCcccccccccccCCHHHHHH
Q psy6556         392 KQPSICAVCGDTFKTNYNYFVHMRRHTG---FKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIK  468 (836)
Q Consensus       392 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  468 (836)
                      ...|+|+.||+.+.+..+|.+|.++|-.   .+.+.|++|++.|.+..+|..|+++|+  .++.|.+||+.|.....|+-
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhc
Confidence            4568899999999999999999888853   567899999999999999999999987  78899999999999999999


Q ss_pred             HHhhhcCCCccccccchhcccChHHHHHHHhhhcCCCcccCccccccccChHHHHHHHH
Q psy6556         469 HMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQI  527 (836)
Q Consensus       469 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  527 (836)
                      |+++|+|++||.|+.|++.|+++++|+.||++|.+.++|.|..|+++|..++.|.+|..
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999864

>KOG3623|consensus

Probab=99.88  E-value=3.9e-23  Score=212.38  Aligned_cols=117  Identities=29%  Similarity=0.617  Sum_probs=103.7

Q ss_pred             eecccccccccChHHHHHHHHhhccCCCccccccCccccccCChhhHHhhhhhcccCCCc---cccccCCCcccCCcccc
Q psy6556          49 VRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSE---YPCIYCRNIYPCSFCAY  125 (836)
Q Consensus        49 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~---~~C~~C~~~~~C~~C~~  125 (836)
                      ..|++|+..+.....|+.|++.+|..+.. .|.|..|..+|..+..|.+||.+|....+.   ..-..|.+.|+|..|++
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~-nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEP-NFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCC-CCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            57999999999999999999988876654 589999999999999999999999765432   33455667899999999


Q ss_pred             cccChHHHHHHHHHhcCCCceeccccccccCCcchHHHHHH
Q psy6556         126 RGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQN  166 (836)
Q Consensus       126 ~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  166 (836)
                      .|+.+-+|+.|+|||.|+|||.|+-|++.|....++..||-
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            99999999999999999999999999999999999999974

>KOG3623|consensus

Probab=99.84  E-value=6.2e-21  Score=196.36  Aligned_cols=108  Identities=26%  Similarity=0.615  Sum_probs=97.3

Q ss_pred             cccCccccccCChhhHHhhhhhcccCCCccccccCCCcccCCcccccccChHHHHHHHHHhcC-------------CCce
Q psy6556          80 YKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLN-------------IKPY  146 (836)
Q Consensus        80 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~~~C~~C~~~~~~~~~l~~H~~~h~~-------------~~~~  146 (836)
                      ..|+.|++.+.....|+.|++.-+..+.+        .|.|..|.+.|.++..|.+||.+|..             .+.|
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~--------nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKF  282 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEP--------NFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKF  282 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCC--------CCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccc
Confidence            57999999999999999999876555433        68999999999999999999999853             3569


Q ss_pred             eccccccccCCcchHHHHHHHhCCCCCcccCcCCCcccChhhhhhhhhc
Q psy6556         147 ACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLC  195 (836)
Q Consensus       147 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  195 (836)
                      +|++||++|..+..|+.|+|||.|+|||.|+.|++.|.....+..||-.
T Consensus       283 KCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  283 KCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             cccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            9999999999999999999999999999999999999999999999754

>KOG3576|consensus

Probab=99.62  E-value=1.5e-16  Score=138.32  Aligned_cols=112  Identities=27%  Similarity=0.482  Sum_probs=95.5

Q ss_pred             CCCcccccchHhhcChhhHHHHhhhcCCCCccccCcchhhccChhHHHHHHhhhcCCCcccccccccccCCHHHHHHHHh
Q psy6556         392 KQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMK  471 (836)
Q Consensus       392 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  471 (836)
                      ...|.|.+||+.|.-...|.+||+-|...+.|-|..||+.|....+|++|+++|+|.+||+|..|+++|+++-+|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            45688999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             hhcC-----------CCccccccchhcccChHHHHHHHhhhcC
Q psy6556         472 RHFN-----------TNKPVCEICSQTMAHNQVLQRHMTLHFT  503 (836)
Q Consensus       472 ~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~  503 (836)
                      ..++           .+.|+|+.||.+-.....+..|++.|+.
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            7665           3456677777777777777777766654

>KOG3576|consensus

Probab=99.57  E-value=4.2e-16  Score=135.66  Aligned_cols=114  Identities=24%  Similarity=0.503  Sum_probs=76.5

Q ss_pred             cccCCcccccccChHHHHHHHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcCCCcccChhhhhhhhhcc
Q psy6556         117 IYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD  196 (836)
Q Consensus       117 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  196 (836)
                      .|.|.+|++.|....-|.+|++-|...+.|-|..||+.|...-+|.+|+++|+|.+||+|..|++.|+..-.|..|.+..
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kv  196 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKV  196 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHH
Confidence            46666666666666666666666666666666666666666666666666666666666666666666666666665555


Q ss_pred             CCC----------CCcccCCccccccCChhhHhhhhcccCCCCC
Q psy6556         197 HQD----------VRNYLCNFCNKTYKDRKTLDNHILGHVDIKP  230 (836)
Q Consensus       197 h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  230 (836)
                      |..          .+.|.|..||.+-.....+..|++.|+...|
T Consensus       197 hgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  197 HGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             cCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            532          3567888888888888888888887765544

>PHA00733 hypothetical protein

Probab=99.04  E-value=1.1e-10  Score=100.31  Aligned_cols=84  Identities=17%  Similarity=0.248  Sum_probs=51.5

Q ss_pred             CceecCcccccccchhhhhhH--HHhhcccCCCCccccCccchhcccchhHHHHHhhcCCCccCCccchhcccchhhhhc
Q psy6556         745 GKYVCNYCGKSYIDKRDYTNH--VSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRH  822 (836)
Q Consensus       745 ~~~~C~~C~~~f~~~~~l~~H--~~~H~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~C~~C~~~f~~~~~l~~H  822 (836)
                      +++.|.+|++.|.....|..|  ++.|.......+|+|+.||+.|.+...|..|++.|..+|.|++|++.|.....|.+|
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H  118 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDH  118 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHH
Confidence            456666666666665555555  333332223345667777777777777777766665567777777777777777777


Q ss_pred             cccccC
Q psy6556         823 SLKHFN  828 (836)
Q Consensus       823 ~~~H~~  828 (836)
                      +...+|
T Consensus       119 ~~~~h~  124 (128)
T PHA00733        119 VCKKHN  124 (128)
T ss_pred             HHHhcC
Confidence            665543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.01  E-value=6.7e-10  Score=117.99  Aligned_cols=147  Identities=20%  Similarity=0.464  Sum_probs=92.4

Q ss_pred             ccccccccccccCHHHHHHHHhhhcCCcceeccc--ccccccChHHHHHHHHhhccCCCccccccCccccccCChhhHHh
Q psy6556          20 TYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGY--CGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFER   97 (836)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~   97 (836)
                      .-.|+.|...... ..|..|+.... -....|+.  ||..|. ...|..|            +.|+.|++.|. ...|..
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe~~C~-r~~V~Cp~~~Cg~v~~-r~el~~H------------~~C~~Cgk~f~-~s~Lek  470 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHEAYCS-RHNVVCPHDGCGIVLR-VEEAKNH------------VHCEKCGQAFQ-QGEMEK  470 (567)
T ss_pred             eEECCCCCCccch-hHHHHHHhhCC-CcceeCCcccccceee-ccccccC------------ccCCCCCCccc-hHHHHH
Confidence            3467777766653 44667765432 23456764  777773 2223323            46788877775 566777


Q ss_pred             hhhhcccCCCccccccCCCcccCCcccccccChHHHHHHHHHhcCCCceeccccccccCC----------cchHHHHHHH
Q psy6556          98 HKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAH----------KSSRDAHQNI  167 (836)
Q Consensus        98 H~~~h~~~~~~~~C~~C~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~----------~~~L~~H~~~  167 (836)
                      |++.++.            ++.|+ |++.+ .+..|..|+++|.+.+++.|.+|++.|..          .+.|..|...
T Consensus       471 H~~~~Hk------------pv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~  536 (567)
T PLN03086        471 HMKVFHE------------PLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI  536 (567)
T ss_pred             HHHhcCC------------CccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh
Confidence            7777641            46676 77543 56777777777777777777777777741          2467777776


Q ss_pred             hCCCCCcccCcCCCcccChhhhhhhhhccCC
Q psy6556         168 HTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQ  198 (836)
Q Consensus       168 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  198 (836)
                      . +.+++.|..||+.+.. ..|..|+...|.
T Consensus       537 C-G~rt~~C~~Cgk~Vrl-rdm~~H~~~~h~  565 (567)
T PLN03086        537 C-GSRTAPCDSCGRSVML-KEMDIHQIAVHQ  565 (567)
T ss_pred             c-CCcceEccccCCeeee-hhHHHHHHHhhc
Confidence            4 6777777777777653 345666555443

>PHA02768 hypothetical protein; Provisional

Probab=98.99  E-value=1.7e-10  Score=79.39  Aligned_cols=43  Identities=16%  Similarity=0.477  Sum_probs=37.4

Q ss_pred             cccCccchhcccchhHHHHHhhcCCCccCCccchhcccchhhh
Q psy6556         778 QRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFI  820 (836)
Q Consensus       778 ~~C~~C~~~F~~~~~L~~H~~~h~~~~~C~~C~~~f~~~~~l~  820 (836)
                      |+|+.||+.|++.+.|..||++|+.+|+|..|++.|.+.++|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcCCcccCCcccceecccceeE
Confidence            7899999999999999999999888889999999888887764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.97  E-value=1.4e-09  Score=115.53  Aligned_cols=151  Identities=18%  Similarity=0.421  Sum_probs=116.7

Q ss_pred             CCCeeecCcCCCcccCHHHHHHHHhhccCCCCCccccc--chHhhcChhhHHHHhhhcCCCCccccCcchhhccChhHHH
Q psy6556         362 NNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQ  439 (836)
Q Consensus       362 ~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  439 (836)
                      ......|+.|...... ..|..|...-.  .....|+.  ||..|. +..+.         +.+.|+.|++.|. ...|.
T Consensus       404 ~~~~V~C~NC~~~i~l-~~l~lHe~~C~--r~~V~Cp~~~Cg~v~~-r~el~---------~H~~C~~Cgk~f~-~s~Le  469 (567)
T PLN03086        404 DVDTVECRNCKHYIPS-RSIALHEAYCS--RHNVVCPHDGCGIVLR-VEEAK---------NHVHCEKCGQAFQ-QGEME  469 (567)
T ss_pred             CCCeEECCCCCCccch-hHHHHHHhhCC--CcceeCCcccccceee-ccccc---------cCccCCCCCCccc-hHHHH
Confidence            3455689999887654 45567875433  23456874  998883 33333         3368999999996 67899


Q ss_pred             HHHhhhcCCCcccccccccccCCHHHHHHHHhhhcCCCccccccchhccc----------ChHHHHHHHhhhcCCCcccC
Q psy6556         440 HHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMA----------HNQVLQRHMTLHFTQNKHPC  509 (836)
Q Consensus       440 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~~C  509 (836)
                      .|+.+++  .++.|+ ||+.+ .+..|..|+..|.+.+++.|+.|++.|.          ....|..|.... |.+++.|
T Consensus       470 kH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C  544 (567)
T PLN03086        470 KHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPC  544 (567)
T ss_pred             HHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEc
Confidence            9999985  789999 99755 6789999999999999999999999985          235788998885 8899999


Q ss_pred             ccccccccChHHHHHHHHHHhCC
Q psy6556         510 NRCNASFSSMVQLSCHQIRAHGK  532 (836)
Q Consensus       510 ~~C~~~f~~~~~L~~H~~~~h~~  532 (836)
                      ..||+.+.. ..|..|+...|.+
T Consensus       545 ~~Cgk~Vrl-rdm~~H~~~~h~~  566 (567)
T PLN03086        545 DSCGRSVML-KEMDIHQIAVHQK  566 (567)
T ss_pred             cccCCeeee-hhHHHHHHHhhcC
Confidence            999998875 6788899888854

>PHA00733 hypothetical protein

Probab=98.79  E-value=6.7e-09  Score=89.30  Aligned_cols=55  Identities=18%  Similarity=0.428  Sum_probs=37.3

Q ss_pred             CCCccccccchhcccChHHHHHHHhhhcCCCcccCccccccccChHHHHHHHHHHhC
Q psy6556         475 NTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHG  531 (836)
Q Consensus       475 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~  531 (836)
                      +..+|.|+.|++.|.+...|..|++.|  ..+|.|+.|++.|.....|..|+...|+
T Consensus        70 ~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         70 AVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            355666666666666666666666654  2457777777777777777777776665

>PHA02768 hypothetical protein; Provisional

Probab=98.78  E-value=2.4e-09  Score=73.88  Aligned_cols=44  Identities=20%  Similarity=0.364  Sum_probs=29.9

Q ss_pred             CcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHH
Q psy6556         688 PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLI  733 (836)
Q Consensus       688 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  733 (836)
                      .|.|+.||+.|...++|..|+++|+  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4667777777777777777777766  5677777777776666553

>KOG1146|consensus

Probab=98.71  E-value=8.7e-09  Score=116.27  Aligned_cols=104  Identities=16%  Similarity=0.208  Sum_probs=70.7

Q ss_pred             ccccchHhhhchhHHHHHHHHhcC----cCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhH
Q psy6556         690 KCKICNQSFALFSNLNAHYNKHLK----VRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNH  765 (836)
Q Consensus       690 ~C~~C~~~f~~~~~L~~H~~~h~~----~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H  765 (836)
                      .|.+|...|.....+..|-.--..    .--+.|..|++.|.....+. |+-.     +.+|.|..|...|...+.|..|
T Consensus      1230 ~~~~~e~~f~~~~~~~~~a~~~~~~~~~sGe~~c~~~~~~~~~~~~~~-~l~~-----~~~~~~~~~~~~~~~~~~l~~~ 1303 (1406)
T KOG1146|consen 1230 LPNALEQPFPQEPEPTATAPPKPPELPASGEGECGAVDELLTPSFGIS-TLDV-----THRYLCRQCKMAFDGEAPLTAH 1303 (1406)
T ss_pred             cHHhhhcCccCcccccccCCCCCCcCcCCCcchhhhccccccCcccee-eccc-----chhHHHHHHHhhhcchhHHHHH
Confidence            466677777766666555332111    12367889998888888887 6643     4578999999999999888888


Q ss_pred             HHhhc-------------ccCCCCccccCccchhcccchhHHHHHhh
Q psy6556         766 VSVHM-------------ERKSGYTQRCHKCNATFRIKKFLTRHMKT  799 (836)
Q Consensus       766 ~~~H~-------------~~~~~~~~~C~~C~~~F~~~~~L~~H~~~  799 (836)
                      .+.-.             -.-+...|-|..|...|.....|+.||+.
T Consensus      1304 ~~k~~~~~~~~~~~~~~~l~~~d~~~~c~~c~~~~~~~~alqihm~~ 1350 (1406)
T KOG1146|consen 1304 QRKFCFAGRGSGGSMPPPLRVPDCTYHCLACEVLLSGREALQIHMRS 1350 (1406)
T ss_pred             HHHHHhccCccccCCCCcccCccccccchHHHhhcchhHHHHHHHHH
Confidence            74310             01111223399999999999999999886

>KOG1146|consensus

Probab=98.69  E-value=1.2e-08  Score=115.15  Aligned_cols=140  Identities=14%  Similarity=0.251  Sum_probs=94.4

Q ss_pred             ccccccccccCHHHHHHHHh-hhcCCcceecccccccccChHHHHHHHHhhccCC----------------------Ccc
Q psy6556          22 HCPLCSKQFSKLTTLKRHVG-IHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSN----------------------KKI   78 (836)
Q Consensus        22 ~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~----------------------~~~   78 (836)
                      .|.-|+..|.+...+..|+. ++.-.+.+.|+.|++.|.....|..|++.+|...                      ..+
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~  517 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGK  517 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCC
Confidence            46667777888888888864 4555688999999999999999999999765321                      124


Q ss_pred             ccccCccccccCChhhHHhhhhhcc--cC--------------CCccccccC-----------------CCcccCCcccc
Q psy6556          79 YYKCDKCNKTYKSKYKFERHKNTHV--TE--------------NSEYPCIYC-----------------RNIYPCSFCAY  125 (836)
Q Consensus        79 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~--------------~~~~~C~~C-----------------~~~~~C~~C~~  125 (836)
                      +|.|..|+..+.++.+|.+|++.-.  .+              ...-.+..+                 .-.+.|.+|++
T Consensus       518 p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~y  597 (1406)
T KOG1146|consen  518 PYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSY  597 (1406)
T ss_pred             cccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcc
Confidence            7999999999999999999987421  10              000001111                 11478999999


Q ss_pred             cccChHHHHHHHHHhcCCCc-eeccccccccCCcchH
Q psy6556         126 RGRYRYHFKAHLRIHLNIKP-YACKYCGNAFAHKSSR  161 (836)
Q Consensus       126 ~~~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L  161 (836)
                      .......|+.||..-....+ ..+-.++.++.....+
T Consensus       598 etniarnlrihmtss~~s~~p~~~Lq~~it~~l~~~~  634 (1406)
T KOG1146|consen  598 ETNIARNLRIHMTASPSSSPPSLVLQQNITSSLASLL  634 (1406)
T ss_pred             hhhhhhccccccccCCCCCChHHHhhhcchhhccccc
Confidence            99999999999865322222 4444444444333333

>KOG3993|consensus

Probab=98.56  E-value=1.4e-08  Score=99.81  Aligned_cols=175  Identities=15%  Similarity=0.203  Sum_probs=100.7

Q ss_pred             ceecccccccccChHHHHHHHHhhccCCCccccccCccccccCChhhHHhhhhhcccCCCc-------------------
Q psy6556          48 PVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSE-------------------  108 (836)
Q Consensus        48 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-------------------  108 (836)
                      .|.|..|...|.+.-.|.+|.--.-.   ...|+|+.|+|.|+-..+|..|.++|......                   
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV---~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~  343 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIV---HVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQ  343 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeE---EeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhh
Confidence            46777777777777777777321111   12477777777777777777777777432100                   


Q ss_pred             ----cccccCCCcccCCcccccccChHHHHHHHHHhcCCC-----------------ceeccccccccCCcchHHHHHHH
Q psy6556         109 ----YPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIK-----------------PYACKYCGNAFAHKSSRDAHQNI  167 (836)
Q Consensus       109 ----~~C~~C~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~-----------------~~~C~~C~~~f~~~~~L~~H~~~  167 (836)
                          -.-+.-+.+|.|.+|++.|+....|+.|+.+|....                 .+.|..|+-.+.....-..+...
T Consensus       344 ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~  423 (500)
T KOG3993|consen  344 EAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLY  423 (500)
T ss_pred             hccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceee
Confidence                000112336777777777777777777766664211                 12334443333332222222111


Q ss_pred             hCC-CCCcccCcCCCcccChhhhhhhhhccCCCCCcccCCccccccCChhhHhhhhcccC
Q psy6556         168 HTD-LKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHV  226 (836)
Q Consensus       168 h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  226 (836)
                      +.+ ...-.|+.|+..+.+...--.+.+..+ ....|.|.+|.-+|.+...|.+|+...+
T Consensus       424 ~a~sael~~pp~~~~ppsss~~sgg~~rlg~-~~q~f~~ky~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  424 VAGSAELELPPYDGSPPSSSGSSGGYGRLGI-AEQGFTCKYCPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             eeccccccCCCCCCCCcccCCCCCccccccc-hhhccccccchHhhhcCcchHhHhhhcC
Confidence            111 112357788877777666555543322 2345889999999999999999886543

>KOG3993|consensus

Probab=98.53  E-value=2.2e-08  Score=98.53  Aligned_cols=159  Identities=20%  Similarity=0.268  Sum_probs=106.2

Q ss_pred             CcccCcCCCcccChhhhhhhhhccCCCCCcccCCccccccCChhhHhhhhcccCCCC--------Cccccccc----ccc
Q psy6556         173 PYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIK--------PYKQLSNL----QSH  240 (836)
Q Consensus       173 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--------~~~~~~~l----~~h  240 (836)
                      .|.|..|...|...-.|.+|.-. --....|+|+.|+|+|+-..+|..|.+-|....        |-++....    +..
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~-RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCP-RIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCC-eeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            37888888888888888888421 112235889999999999999999988875322        11111000    000


Q ss_pred             cc-cccCCCCCccCCccccccCChhHHHHHHhhhcCCCc-----------------------------------------
Q psy6556         241 IR-ISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTK-----------------------------------------  278 (836)
Q Consensus       241 ~~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-----------------------------------------  278 (836)
                      .+ -....+..|.|.+|++.|.....|+.|+.+|.....                                         
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a  425 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVA  425 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeee
Confidence            00 011334579999999999999999999877643210                                         


Q ss_pred             ----cccCCCCCCccCChHHHHHHHhhcCCCCCcccccchhhcCChhHHHchHhhhcC
Q psy6556         279 ----SFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHN  332 (836)
Q Consensus       279 ----~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  332 (836)
                          ...+++++..++++..-..+.+.-..+..|.|.+|.-.|.+...|.+|+...|.
T Consensus       426 ~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  426 GSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             ccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcCh
Confidence                123555555555544443444333445669999999999999999999998886

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.48  E-value=7.9e-08  Score=56.57  Aligned_cols=26  Identities=27%  Similarity=0.646  Sum_probs=20.2

Q ss_pred             HHHHHHHHhcCcCcccCCcccccccC
Q psy6556         703 NLNAHYNKHLKVRRFSCTNCSLNFTY  728 (836)
Q Consensus       703 ~L~~H~~~h~~~~~~~C~~C~~~f~~  728 (836)
                      +|+.|++.|+|++||+|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47788888888888888888887753

...

>PHA00732 hypothetical protein

Probab=98.36  E-value=2.1e-07  Score=71.72  Aligned_cols=45  Identities=24%  Similarity=0.601  Sum_probs=23.3

Q ss_pred             eecCcccccccchhhhhhHHHh-hcccCCCCccccCccchhcccchhHHHHHhhc
Q psy6556         747 YVCNYCGKSYIDKRDYTNHVSV-HMERKSGYTQRCHKCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       747 ~~C~~C~~~f~~~~~l~~H~~~-H~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~h  800 (836)
                      |.|+.||+.|.+...|..|++. |.+      +.|++||++|.   .|..|+++.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~~------~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHTL------TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccCC------CccCCCCCEeC---Chhhhhccc
Confidence            5555555555555555555553 321      34555555554   355555444

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.35  E-value=3.2e-07  Score=54.00  Aligned_cols=24  Identities=46%  Similarity=1.171  Sum_probs=14.8

Q ss_pred             HHHHHHHhcCCCceeccccccccC
Q psy6556         133 FKAHLRIHLNIKPYACKYCGNAFA  156 (836)
Q Consensus       133 l~~H~~~h~~~~~~~C~~C~~~f~  156 (836)
                      |.+|+++|++++||.|++|+++|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            556666666666666666666654

...

>PHA00616 hypothetical protein

Probab=98.30  E-value=4e-07  Score=59.64  Aligned_cols=34  Identities=15%  Similarity=0.182  Sum_probs=28.8

Q ss_pred             CcccccchHhhhchhHHHHHHHHhcCcCcccCCc
Q psy6556         688 PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTN  721 (836)
Q Consensus       688 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  721 (836)
                      ||+|+.||+.|...++|..|++.|+|+++|.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5788888888888888888888888888888765

>PHA00616 hypothetical protein

Probab=98.30  E-value=2.6e-07  Score=60.50  Aligned_cols=34  Identities=15%  Similarity=0.348  Sum_probs=24.5

Q ss_pred             CcccccchHhhcCchhHHhhhhhcCCCccccCCc
Q psy6556         599 PFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK  632 (836)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  632 (836)
                      ||+|+.||+.|...+.|..|++.|+|++|+.|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5677777777777777777777777777776654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.07  E-value=4.5e-06  Score=59.83  Aligned_cols=50  Identities=22%  Similarity=0.489  Sum_probs=24.9

Q ss_pred             ccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhh
Q psy6556         717 FSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       717 ~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H  769 (836)
                      |.|++|++. .+...|..|....|....+.+.||+|...+.  .+|..|+..+
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            555555553 3344555555555544444455555555433  2555555443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.07  E-value=2.3e-06  Score=66.00  Aligned_cols=45  Identities=31%  Similarity=0.572  Sum_probs=20.5

Q ss_pred             ccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHh
Q psy6556         717 FSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSV  768 (836)
Q Consensus       717 ~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~  768 (836)
                      |.|++||+.|.+.++|..|++.+|.    ++.|+.||+.|.   .|..|++.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~----~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT----LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC----CCccCCCCCEeC---Chhhhhcc
Confidence            4455555555555555555443221    134555555554   34444433

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.86  E-value=1.8e-05  Score=56.71  Aligned_cols=49  Identities=29%  Similarity=0.541  Sum_probs=24.8

Q ss_pred             eecccccccccChHHHHHHHHhhccCCCccccccCccccccCChhhHHhhhhh
Q psy6556          49 VRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNT  101 (836)
Q Consensus        49 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  101 (836)
                      |.|++|++. .+...|..|+...|..+.. .+.|++|...+.  .+|..|+..
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~-~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESK-NVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCC-CccCCCchhhhh--hHHHHHHHH
Confidence            555555552 3445555555555554332 355666555433  255555544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.72  E-value=1.3e-05  Score=45.98  Aligned_cols=21  Identities=38%  Similarity=0.806  Sum_probs=9.9

Q ss_pred             ccCccchhcccchhHHHHHhh
Q psy6556         779 RCHKCNATFRIKKFLTRHMKT  799 (836)
Q Consensus       779 ~C~~C~~~F~~~~~L~~H~~~  799 (836)
                      +|+.|+++|.++..|..||+.
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHhH
Confidence            444444444444444444443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.62  E-value=3.4e-05  Score=44.17  Aligned_cols=23  Identities=52%  Similarity=1.113  Sum_probs=16.1

Q ss_pred             cccccccccccCHHHHHHHHhhh
Q psy6556          21 YHCPLCSKQFSKLTTLKRHVGIH   43 (836)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h   43 (836)
                      |.|+.|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.29  E-value=0.00011  Score=61.60  Aligned_cols=21  Identities=33%  Similarity=0.762  Sum_probs=0.0

Q ss_pred             cccchHhhhchhHHHHHHHHh
Q psy6556         691 CKICNQSFALFSNLNAHYNKH  711 (836)
Q Consensus       691 C~~C~~~f~~~~~L~~H~~~h  711 (836)
                      |.+|+..|.+...|..||...
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~   22 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKK   22 (100)
T ss_dssp             ---------------------
T ss_pred             ccccccccccccccccccccc
Confidence            444555555555555554433

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.19  E-value=0.00021  Score=41.38  Aligned_cols=19  Identities=37%  Similarity=0.658  Sum_probs=6.6

Q ss_pred             CCcccccccCchhHHHHHH
Q psy6556         719 CTNCSLNFTYLSNLIRHRR  737 (836)
Q Consensus       719 C~~C~~~f~~~~~L~~H~~  737 (836)
                      |++|++.|.+...|+.|++
T Consensus         3 C~~C~~~~~~~~~l~~H~~   21 (24)
T PF13894_consen    3 CPICGKSFRSKSELRQHMR   21 (24)
T ss_dssp             -SSTS-EESSHHHHHHHHH
T ss_pred             CcCCCCcCCcHHHHHHHHH
Confidence            3333333333333333333

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.17  E-value=0.00022  Score=59.78  Aligned_cols=73  Identities=27%  Similarity=0.529  Sum_probs=20.5

Q ss_pred             cCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCCCCccccCccchhcccchhHHHHH
Q psy6556         718 SCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHM  797 (836)
Q Consensus       718 ~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~~~~~L~~H~  797 (836)
                      +|..|+..|.+...|..|+...|+..     -+ ....+.....+..+++.-...    .+.|.+|++.|.+...|..||
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~-----~~-~~~~l~~~~~~~~~~~~~~~~----~~~C~~C~~~f~s~~~l~~Hm   70 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD-----IP-DQKYLVDPNRLLNYLRKKVKE----SFRCPYCNKTFRSREALQEHM   70 (100)
T ss_dssp             ------------------------------------------------------S----SEEBSSSS-EESSHHHHHHHH
T ss_pred             Cccccccccccccccccccccccccc-----cc-cccccccccccccccccccCC----CCCCCccCCCCcCHHHHHHHH
Confidence            58999999999999999998887521     11 223333555555555432222    488999999999999999999


Q ss_pred             hhc
Q psy6556         798 KTH  800 (836)
Q Consensus       798 ~~h  800 (836)
                      +.+
T Consensus        71 ~~~   73 (100)
T PF12756_consen   71 RSK   73 (100)
T ss_dssp             HHT
T ss_pred             cCc
Confidence            975

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.12  E-value=0.00032  Score=40.65  Aligned_cols=23  Identities=35%  Similarity=1.012  Sum_probs=13.2

Q ss_pred             cccccccccccCHHHHHHHHhhh
Q psy6556          21 YHCPLCSKQFSKLTTLKRHVGIH   43 (836)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h   43 (836)
                      |.|++|++.|.+...|+.|+..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666554

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.11  E-value=0.00019  Score=68.50  Aligned_cols=66  Identities=23%  Similarity=0.427  Sum_probs=35.8

Q ss_pred             CCccccc--chHhhhchhHHHHHHHHhc-CcCccc--CCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhh
Q psy6556         687 APAKCKI--CNQSFALFSNLNAHYNKHL-KVRRFS--CTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRD  761 (836)
Q Consensus       687 ~~~~C~~--C~~~f~~~~~L~~H~~~h~-~~~~~~--C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~  761 (836)
                      +||+|++  |+|.++....|+.|+.--+ ..+...  =++=-..|              ...++||+|++|+|+|.....
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F--------------~~~~KPYrCevC~KRYKNlNG  413 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF--------------SAKDKPYRCEVCDKRYKNLNG  413 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc--------------cccCCceeccccchhhccCcc
Confidence            6777776  7777777777777765421 111000  00000111              123567777777777777777


Q ss_pred             hhhHH
Q psy6556         762 YTNHV  766 (836)
Q Consensus       762 l~~H~  766 (836)
                      |..|.
T Consensus       414 LKYHr  418 (423)
T COG5189         414 LKYHR  418 (423)
T ss_pred             ceecc
Confidence            76664

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.01  E-value=0.00031  Score=67.12  Aligned_cols=70  Identities=23%  Similarity=0.432  Sum_probs=42.1

Q ss_pred             CCceecCc--ccccccchhhhhhHHHh-hcccCCCCccccCccchhcccchhHHHHHhhcCCCccCCccchhcccchhhh
Q psy6556         744 EGKYVCNY--CGKSYIDKRDYTNHVSV-HMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFI  820 (836)
Q Consensus       744 ~~~~~C~~--C~~~f~~~~~l~~H~~~-H~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~C~~C~~~f~~~~~l~  820 (836)
                      ++||+|++  |+|.|.++..|..|+.- |-..+.- +-.=++=-..|.          .--+||+|++|+|+|+....|+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~-~~p~p~~~~~F~----------~~~KPYrCevC~KRYKNlNGLK  415 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLH-ENPSPEKMNIFS----------AKDKPYRCEVCDKRYKNLNGLK  415 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccC-CCCCcccccccc----------ccCCceeccccchhhccCccce
Confidence            57888887  88888888888888642 2111100 000000011110          1124899999999999999999


Q ss_pred             hccc
Q psy6556         821 RHSL  824 (836)
Q Consensus       821 ~H~~  824 (836)
                      -|+.
T Consensus       416 YHr~  419 (423)
T COG5189         416 YHRK  419 (423)
T ss_pred             eccc
Confidence            8864

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.00  E-value=0.00043  Score=41.41  Aligned_cols=25  Identities=36%  Similarity=0.770  Sum_probs=16.3

Q ss_pred             ccccccccccccCHHHHHHHHhhhc
Q psy6556          20 TYHCPLCSKQFSKLTTLKRHVGIHM   44 (836)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~   44 (836)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4666666666666666666666553

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.98  E-value=0.00039  Score=41.59  Aligned_cols=25  Identities=36%  Similarity=0.813  Sum_probs=16.2

Q ss_pred             ccccCccccccCChhhHHhhhhhcc
Q psy6556          79 YYKCDKCNKTYKSKYKFERHKNTHV  103 (836)
Q Consensus        79 ~~~C~~C~~~f~~~~~l~~H~~~h~  103 (836)
                      +|.|+.|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            3566666666666666666666553

>KOG2231|consensus

Probab=96.72  E-value=0.0019  Score=70.50  Aligned_cols=46  Identities=30%  Similarity=0.591  Sum_probs=22.4

Q ss_pred             cCCcccccccCchhHHHHHHhhcCCCCCceecCcc------cccccchhhhhhHHHhh
Q psy6556         718 SCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYC------GKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       718 ~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C------~~~f~~~~~l~~H~~~H  769 (836)
                      .|..|...|.....|.+|++..|      |.|..|      +..|.+..+|..|.+.+
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h------~~chfC~~~~~~neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH------EFCHFCDYKTGQNEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce------eheeecCcccccchhcccchHHHHHhhhc
Confidence            35555555555555555555443      334444      23344455555555443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.63  E-value=0.0012  Score=44.36  Aligned_cols=30  Identities=27%  Similarity=0.435  Sum_probs=19.0

Q ss_pred             CCcccccchHhhhchhHHHHHHHHhcCcCc
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNKHLKVRR  716 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  716 (836)
                      .|..|++|+..+.+..+|++|+..+++.+|
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            577788888888888888888877777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2231|consensus

Probab=96.59  E-value=0.0052  Score=67.19  Aligned_cols=108  Identities=22%  Similarity=0.467  Sum_probs=58.5

Q ss_pred             ccccchhhcCChhHHHchHhhhcCCCcccccccccCccccccccccccccCCCCCCeeecCcCCCcccCHHHHHHHHhhc
Q psy6556         309 NCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSH  388 (836)
Q Consensus       309 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~  388 (836)
                      .|..| -.|.+...|+.|+...|....|..|......                    +   ++-.+..+..+|..|+...
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~ki--------------------f---~~e~k~Yt~~el~~h~~~g  172 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKI--------------------F---INERKLYTRAELNLHLMFG  172 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhhhhcccccccccee--------------------e---eeeeehehHHHHHHHHhcC
Confidence            46667 6677777777777777776666665443221                    1   1112334455666666554


Q ss_pred             cCCCCC----cccccchHhhcChhhHHHHhhhcCCCCccccCcch------hhccChhHHHHHHhh
Q psy6556         389 HFPKQP----SICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCN------ASYASMRVLQHHEIT  444 (836)
Q Consensus       389 ~~~~~~----~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~------~~f~~~~~L~~H~~~  444 (836)
                      -.++..    -.|..|...|.....|..|++.++    |.|..|+      .-|.....|..|.+.
T Consensus       173 d~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~  234 (669)
T KOG2231|consen  173 DPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRK  234 (669)
T ss_pred             CCccccccCCccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhh
Confidence            321111    246666666666666666666544    4455553      334444555555443

>smart00355 ZnF_C2H2 zinc finger

Probab=96.43  E-value=0.0018  Score=38.24  Aligned_cols=24  Identities=42%  Similarity=0.841  Sum_probs=15.0

Q ss_pred             cccCccchhcccchhHHHHHhhcC
Q psy6556         778 QRCHKCNATFRIKKFLTRHMKTHL  801 (836)
Q Consensus       778 ~~C~~C~~~F~~~~~L~~H~~~h~  801 (836)
                      |+|+.|+++|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            356666666666666666666553

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.37  E-value=0.0018  Score=43.48  Aligned_cols=40  Identities=28%  Similarity=0.473  Sum_probs=20.6

Q ss_pred             HHHhhccCCCCCcccccchHhhcChhhHHHHhhhcCCCCc
Q psy6556         383 AHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKP  422 (836)
Q Consensus       383 ~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  422 (836)
                      .+.+++...+.|-.|++|+..+....+|++|+..+++.+|
T Consensus        13 ~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   13 KKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ---CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3444445556667777777777777777777766665554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.06  E-value=0.0053  Score=36.12  Aligned_cols=24  Identities=42%  Similarity=0.872  Sum_probs=17.1

Q ss_pred             cccccccccccCHHHHHHHHhhhc
Q psy6556          21 YHCPLCSKQFSKLTTLKRHVGIHM   44 (836)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h~   44 (836)
                      |.|+.|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            567777777777777777776553

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.67  E-value=0.0056  Score=35.28  Aligned_cols=23  Identities=43%  Similarity=0.759  Sum_probs=13.8

Q ss_pred             ccCCccchhhcchhhHHHHhhhhc
Q psy6556         628 YKCTKCNYSARVLSNKLAHERIYH  651 (836)
Q Consensus       628 ~~C~~C~~~f~~~~~l~~H~~~h~  651 (836)
                      |+|+.|+++.. ..+|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777776666 666777766655

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.60  E-value=0.0081  Score=35.01  Aligned_cols=22  Identities=32%  Similarity=0.818  Sum_probs=14.1

Q ss_pred             cccccccccccCHHHHHHHHhh
Q psy6556          21 YHCPLCSKQFSKLTTLKRHVGI   42 (836)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~   42 (836)
                      |.|++|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666643

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.58  E-value=0.0064  Score=35.46  Aligned_cols=22  Identities=32%  Similarity=0.818  Sum_probs=13.7

Q ss_pred             cccCccccccCChhhHHhhhhh
Q psy6556          80 YKCDKCNKTYKSKYKFERHKNT  101 (836)
Q Consensus        80 ~~C~~C~~~f~~~~~l~~H~~~  101 (836)
                      |.|++|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666654

>KOG2482|consensus

Probab=95.21  E-value=0.027  Score=54.93  Aligned_cols=53  Identities=17%  Similarity=0.305  Sum_probs=42.1

Q ss_pred             cccCcCCCcccChhhhhhhhhccCCCC--------------------------CcccCCccccccCChhhHhhhhcccC
Q psy6556         174 YLCLTCGQSFRTFNLMKRHNLCDHQDV--------------------------RNYLCNFCNKTYKDRKTLDNHILGHV  226 (836)
Q Consensus       174 ~~C~~C~~~f~~~~~l~~H~~~~h~~~--------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~  226 (836)
                      ..|-.|.....+...|..||...|.=.                          ..-.|-.|+-.|.....|..||..+.
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~k  358 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVEDK  358 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccccc
Confidence            479999999888999999988777310                          12358899999999999999987543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.13  E-value=0.017  Score=33.19  Aligned_cols=23  Identities=35%  Similarity=0.482  Sum_probs=12.6

Q ss_pred             ccCccccccccChHHHHHHHHHHh
Q psy6556         507 HPCNRCNASFSSMVQLSCHQIRAH  530 (836)
Q Consensus       507 ~~C~~C~~~f~~~~~L~~H~~~~h  530 (836)
                      |+|+.|+++.. ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666665 556666666555

>PRK04860 hypothetical protein; Provisional

Probab=95.05  E-value=0.0073  Score=54.21  Aligned_cols=41  Identities=22%  Similarity=0.602  Sum_probs=34.9

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhh
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSN  642 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~  642 (836)
                      -+|.|. |+.   ....+.+|.++|+++++|.|..|+..|....+
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~~  158 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKGE  158 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEecc
Confidence            379998 987   77889999999999999999999988875543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.88  E-value=0.018  Score=34.28  Aligned_cols=22  Identities=27%  Similarity=0.819  Sum_probs=18.9

Q ss_pred             cccCccccccCChhhHHhhhhh
Q psy6556          80 YKCDKCNKTYKSKYKFERHKNT  101 (836)
Q Consensus        80 ~~C~~C~~~f~~~~~l~~H~~~  101 (836)
                      |.|++|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6789999999999999988875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.79  E-value=0.019  Score=51.54  Aligned_cols=38  Identities=29%  Similarity=0.688  Sum_probs=29.4

Q ss_pred             ceeccccccccCCcchHHHHHHHhCCCCCcccCcCCCcccCh
Q psy6556         145 PYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTF  186 (836)
Q Consensus       145 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~  186 (836)
                      +|.|. |+.   ....+.+|.++|+++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            58887 876   667788888888888888888888777543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.71  E-value=0.011  Score=65.66  Aligned_cols=143  Identities=23%  Similarity=0.287  Sum_probs=95.8

Q ss_pred             CCcccccchHhhcCchhHHhhhh--hcCCC--ccccCC--ccchhhcchhhHHHHhhhhccCccccccCCCccccccchh
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHER--IHDNH--KPYKCT--KCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYS  671 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~--~H~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~c~~~~~~~~  671 (836)
                      .++.|..|...|.....|..|.+  .|+++  +|+.|+  .|++.|.....+..|...+.+..++.+....+........
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            57899999999999999999999  89999  999999  8999999999999999999999888876644444333211


Q ss_pred             HHHhhhhh--cccCCCCCCccccc--chHhhhchhHHHHHHHHhcCcC--cccCCcccccccCchhHHHHHHhhc
Q psy6556         672 CLRRHRKI--FHSNESYAPAKCKI--CNQSFALFSNLNAHYNKHLKVR--RFSCTNCSLNFTYLSNLIRHRRIKH  740 (836)
Q Consensus       672 ~l~~H~~~--~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~--~~~C~~C~~~f~~~~~L~~H~~~~h  740 (836)
                      .-..+...  .........+.+..  |...+.....+..|...|...+  .+.+..|.+.|.....|..|++.+.
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHT  442 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccc
Confidence            10000000  00011112222322  5566666666666666665544  4455667777777777766666554

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.67  E-value=0.025  Score=55.09  Aligned_cols=33  Identities=24%  Similarity=0.573  Sum_probs=22.5

Q ss_pred             CccCCc--cccccCChhHHHHHHhhhcCCCccccCCCC
Q psy6556         250 PFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNVC  285 (836)
Q Consensus       250 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C  285 (836)
                      .|.|+.  |..+......|..|.+..++.   +-|.+|
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~---~~C~~C  185 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF---VLCSEC  185 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc---EEhHhh
Confidence            366765  777777777888888776653   566666

>KOG2482|consensus

Probab=94.41  E-value=0.087  Score=51.62  Aligned_cols=78  Identities=19%  Similarity=0.178  Sum_probs=40.8

Q ss_pred             eecCcCCCcccCHHHHHHHHhhccCCCCCcccccchHhhcChhhHHHHhhhcCCCCccccCcchhhccChhHHHHHHhhh
Q psy6556         366 LLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITH  445 (836)
Q Consensus       366 ~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  445 (836)
                      ..|-.|.....+...|..|++..|.=+-.-.=..=+--|..+..+..-+|.-  ...-.|-.|+..|.....|..|+..+
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq--~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQ--KKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHH--hhccccccccccccCcchhhhhcccc
Confidence            5777887777777788888877663100000000001111111122222111  12245777888888888888887654

>KOG2785|consensus

Probab=94.36  E-value=0.073  Score=53.46  Aligned_cols=53  Identities=26%  Similarity=0.367  Sum_probs=45.4

Q ss_pred             CCCcccccchHhhcCchhHHhhhhhcCCC-----------------------ccccCCccc---hhhcchhhHHHHhhh
Q psy6556         597 DRPFSCLLCNNTFAQLSTLLNHERIHDNH-----------------------KPYKCTKCN---YSARVLSNKLAHERI  649 (836)
Q Consensus       597 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  649 (836)
                      .-|-.|.+|++.|++...-..||..++|-                       .-|.|-.|+   +.|.+..+.++||..
T Consensus       164 ~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  164 LIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             cCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            34678999999999999999999988862                       247899999   999999999999964

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.22  E-value=0.029  Score=33.37  Aligned_cols=22  Identities=23%  Similarity=0.763  Sum_probs=17.0

Q ss_pred             ccCCccccccCChhhHhhhhcc
Q psy6556         203 YLCNFCNKTYKDRKTLDNHILG  224 (836)
Q Consensus       203 ~~C~~C~~~f~~~~~l~~H~~~  224 (836)
                      |.|..|++.|.+...|..|+.+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6688888888888888888653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2785|consensus

Probab=94.04  E-value=0.075  Score=53.35  Aligned_cols=28  Identities=25%  Similarity=0.483  Sum_probs=22.6

Q ss_pred             CCCCCccCCccccccCChhHHHHHHhhh
Q psy6556         246 TGERPFQCKYCNYAFKEKHHLETHVNLH  273 (836)
Q Consensus       246 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h  273 (836)
                      .++-++.|.+|.+.|.+..+...|+..-
T Consensus        64 ~~~~~~~c~~c~k~~~s~~a~~~hl~Sk   91 (390)
T KOG2785|consen   64 EAESVVYCEACNKSFASPKAHENHLKSK   91 (390)
T ss_pred             hcccceehHHhhccccChhhHHHHHHHh
Confidence            3456788999999999999999998653

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.01  E-value=0.035  Score=54.17  Aligned_cols=87  Identities=28%  Similarity=0.462  Sum_probs=54.1

Q ss_pred             chhHHHHHHHHhcCcCcc----cCCcccccccCchhHHHHHHhhcCCCCCceecCccccc-------ccchhhhhhHHHh
Q psy6556         700 LFSNLNAHYNKHLKVRRF----SCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKS-------YIDKRDYTNHVSV  768 (836)
Q Consensus       700 ~~~~L~~H~~~h~~~~~~----~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~-------f~~~~~l~~H~~~  768 (836)
                      +.+.|+.|...-..+..|    .|..|...|-.-..|.+|+|..|   |   .|-+|++.       |.+..+|..|.+.
T Consensus       200 ~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H---E---~ChICD~v~p~~~QYFK~Y~~Le~HF~~  273 (493)
T COG5236         200 RSSTLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRH---E---ACHICDMVGPIRYQYFKSYEDLEAHFRN  273 (493)
T ss_pred             ecccccccccCCccccCcCCCchhhhccceecChHHHHHHHHhhh---h---hhhhhhccCccchhhhhCHHHHHHHhhc
Confidence            345566665443333234    48888888888888888888776   4   45555443       6677777777653


Q ss_pred             hcccCCCCccccCc--c----chhcccchhHHHHHhh
Q psy6556         769 HMERKSGYTQRCHK--C----NATFRIKKFLTRHMKT  799 (836)
Q Consensus       769 H~~~~~~~~~~C~~--C----~~~F~~~~~L~~H~~~  799 (836)
                      -       .|.|.+  |    -..|.....|+.|+..
T Consensus       274 ~-------hy~ct~qtc~~~k~~vf~~~~el~~h~~~  303 (493)
T COG5236         274 A-------HYCCTFQTCRVGKCYVFPYHTELLEHLTR  303 (493)
T ss_pred             C-------ceEEEEEEEecCcEEEeccHHHHHHHHHH
Confidence            2       155543  4    2467777778888654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.43  E-value=0.041  Score=61.07  Aligned_cols=142  Identities=25%  Similarity=0.366  Sum_probs=86.7

Q ss_pred             CcccccchHhhhchhHHHHHHH--HhcCc--CcccCC--cccccccCchhHHHHHHhhcCCCCCceecCc--ccccccch
Q psy6556         688 PAKCKICNQSFALFSNLNAHYN--KHLKV--RRFSCT--NCSLNFTYLSNLIRHRRIKHSQHEGKYVCNY--CGKSYIDK  759 (836)
Q Consensus       688 ~~~C~~C~~~f~~~~~L~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~  759 (836)
                      ++.|..|...|.....|..|++  .|.++  +++.|+  .|++.|.+...|..|...+...  ..+.+..  +...+...
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  366 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI--SPAKEKLLNSSSKFSPL  366 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCC--CccccccccCccccccc
Confidence            5678888888888888888888  78888  888888  6888888888888888777642  3334433  44444333


Q ss_pred             hhhhhHHHhhc--ccCCCCccccC--ccchhcccchhHHHHHhhcCC----CccCCccchhcccchhhhhccccccCCCC
Q psy6556         760 RDYTNHVSVHM--ERKSGYTQRCH--KCNATFRIKKFLTRHMKTHLI----QYRCTRCNKTFKQNTSFIRHSLKHFNSSN  831 (836)
Q Consensus       760 ~~l~~H~~~H~--~~~~~~~~~C~--~C~~~F~~~~~L~~H~~~h~~----~~~C~~C~~~f~~~~~l~~H~~~H~~~~~  831 (836)
                      ..-..+..+..  +......+.+.  .|-..+.....+..|...|..    .+.+..|++.|.....+..|++.|....+
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (467)
T COG5048         367 LNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAP  446 (467)
T ss_pred             cCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCc
Confidence            33221211111  11111123332  266666666666666666643    46666677777777777777777665433

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.36  E-value=0.12  Score=29.88  Aligned_cols=19  Identities=32%  Similarity=0.931  Sum_probs=10.3

Q ss_pred             ccccccccccCHHHHHHHHh
Q psy6556          22 HCPLCSKQFSKLTTLKRHVG   41 (836)
Q Consensus        22 ~C~~C~~~f~~~~~l~~H~~   41 (836)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 4455555543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.08  E-value=0.089  Score=33.60  Aligned_cols=22  Identities=32%  Similarity=0.560  Sum_probs=13.4

Q ss_pred             CccCCccchhcccchhhhhccc
Q psy6556         803 QYRCTRCNKTFKQNTSFIRHSL  824 (836)
Q Consensus       803 ~~~C~~C~~~f~~~~~l~~H~~  824 (836)
                      +|.|++|+..|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4566666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.95  E-value=0.15  Score=29.56  Aligned_cols=19  Identities=32%  Similarity=0.588  Sum_probs=9.2

Q ss_pred             ccCccchhcccchhHHHHHh
Q psy6556         779 RCHKCNATFRIKKFLTRHMK  798 (836)
Q Consensus       779 ~C~~C~~~F~~~~~L~~H~~  798 (836)
                      .|+.||++| ....|..|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            355555555 4444555543

>KOG4173|consensus

Probab=90.54  E-value=0.14  Score=46.33  Aligned_cols=80  Identities=21%  Similarity=0.428  Sum_probs=47.8

Q ss_pred             cccccCCCccccccchhHHHhhhhhcccCCCCCCcccccchHhhhchhHHHHHHHHh----------cCcCcccC--Ccc
Q psy6556         655 VFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKH----------LKVRRFSC--TNC  722 (836)
Q Consensus       655 ~~~C~~c~c~~~~~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h----------~~~~~~~C--~~C  722 (836)
                      .|.|++-+|.-.+........|..+.|++      .|.+|.+.|.+.-.|..|+..-          .|...|+|  +-|
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~------sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN------SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc------hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            35566655665565555566666655533      3777777777777777776432          23345666  346


Q ss_pred             cccccCchhHHHHHHhhc
Q psy6556         723 SLNFTYLSNLIRHRRIKH  740 (836)
Q Consensus       723 ~~~f~~~~~L~~H~~~~h  740 (836)
                      +..|.+..+-..|+...|
T Consensus       153 t~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhhhHHHHhc
Confidence            666666666666665555

>smart00451 ZnF_U1 U1-like zinc finger

Probab=89.61  E-value=0.25  Score=31.51  Aligned_cols=21  Identities=24%  Similarity=0.709  Sum_probs=13.2

Q ss_pred             ccccccccccccCHHHHHHHH
Q psy6556          20 TYHCPLCSKQFSKLTTLKRHV   40 (836)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~   40 (836)
                      +|.|++|++.|.+...+..|+
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             CeEccccCCccCCHHHHHHHH
Confidence            456666666666666666665

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=89.08  E-value=0.14  Score=47.20  Aligned_cols=43  Identities=23%  Similarity=0.479  Sum_probs=34.7

Q ss_pred             eecCcCCCcccCHHHHHHHHhhccCCCCCcccccchHhhcChhhHHHH
Q psy6556         366 LLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVH  413 (836)
Q Consensus       366 ~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  413 (836)
                      --|++|+..|.+..-|..|++..|     |+|.+|-+...+--.|..|
T Consensus        11 pwcwycnrefddekiliqhqkakh-----fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             ceeeecccccchhhhhhhhhhhcc-----ceeeeehhhhccCCCceee
Confidence            358899999999999988888766     6888888887777777666

>KOG4173|consensus

Probab=88.72  E-value=0.27  Score=44.46  Aligned_cols=78  Identities=24%  Similarity=0.461  Sum_probs=61.9

Q ss_pred             CCccccc--chHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcC--------CCCCceecCc--ccc
Q psy6556         687 APAKCKI--CNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHS--------QHEGKYVCNY--CGK  754 (836)
Q Consensus       687 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~--------~~~~~~~C~~--C~~  754 (836)
                      +.+.|++  |.+.|........|+..-++   -.|..|.+.|.+...|..|+.--|.        .+...|+|-+  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            5688988  88999999999999876554   3699999999999999999865552        2344678866  888


Q ss_pred             cccchhhhhhHHH
Q psy6556         755 SYIDKRDYTNHVS  767 (836)
Q Consensus       755 ~f~~~~~l~~H~~  767 (836)
                      .|.+..+...|+-
T Consensus       155 KFkT~r~RkdH~I  167 (253)
T KOG4173|consen  155 KFKTSRDRKDHMI  167 (253)
T ss_pred             hhhhhhhhhhHHH
Confidence            8888888888864

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=87.68  E-value=0.28  Score=30.73  Aligned_cols=11  Identities=55%  Similarity=1.177  Sum_probs=6.9

Q ss_pred             eecCccccccc
Q psy6556         747 YVCNYCGKSYI  757 (836)
Q Consensus       747 ~~C~~C~~~f~  757 (836)
                      |+|.+||..+.
T Consensus         2 ~~C~~CGy~y~   12 (33)
T cd00350           2 YVCPVCGYIYD   12 (33)
T ss_pred             EECCCCCCEEC
Confidence            56666766654

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR00622 ssl1 transcription factor ssl1

Probab=87.64  E-value=1.1  Score=37.18  Aligned_cols=25  Identities=20%  Similarity=0.309  Sum_probs=17.2

Q ss_pred             ccccCccchhcccchhHHHHHhhcC
Q psy6556         777 TQRCHKCNATFRIKKFLTRHMKTHL  801 (836)
Q Consensus       777 ~~~C~~C~~~F~~~~~L~~H~~~h~  801 (836)
                      .|+|+.|...|--.-++-.|...|.
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             ceeCCCCCCccccccchhhhhhccC
Confidence            3777777777777777776666654

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>TIGR00622 ssl1 transcription factor ssl1

Probab=87.19  E-value=0.62  Score=38.54  Aligned_cols=80  Identities=24%  Similarity=0.476  Sum_probs=53.4

Q ss_pred             CCcccccchHhhhchhHHHHHHHHhcCcCcc------------cCCcccccccCchhHHHHHHhhcCCCCCceecCcccc
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNKHLKVRRF------------SCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGK  754 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~------------~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~  754 (836)
                      -|..|++||-+..++..|.+-+.---..++|            .|--|.+.|........=    -......|+|+.|..
T Consensus        14 LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~----~~~~~~~y~C~~C~~   89 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFD----ELKDSHRYVCAVCKN   89 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCccccccc----ccccccceeCCCCCC
Confidence            4677888888888777776543211112222            399999999765422100    011356899999999


Q ss_pred             cccchhhhhhHHHhhc
Q psy6556         755 SYIDKRDYTNHVSVHM  770 (836)
Q Consensus       755 ~f~~~~~l~~H~~~H~  770 (836)
                      .|-..-++-.|...|.
T Consensus        90 ~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        90 VFCVDCDVFVHESLHC  105 (112)
T ss_pred             ccccccchhhhhhccC
Confidence            9999999999987773

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2893|consensus

Probab=84.45  E-value=0.32  Score=45.03  Aligned_cols=49  Identities=22%  Similarity=0.419  Sum_probs=33.5

Q ss_pred             eccccccccCCcchHHHHHHHhCCCCCcccCcCCCcccChhhhhhhhhccCCC
Q psy6556         147 ACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQD  199 (836)
Q Consensus       147 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  199 (836)
                      -|-+|++.|....-|..|++.    +-|+|-+|.+..-+--.|..|...+|.+
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhhhh
Confidence            377777777777777777664    3377777777776777777776555543

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=80.35  E-value=0.89  Score=28.69  Aligned_cols=10  Identities=40%  Similarity=0.966  Sum_probs=6.4

Q ss_pred             eecCcccccc
Q psy6556         747 YVCNYCGKSY  756 (836)
Q Consensus       747 ~~C~~C~~~f  756 (836)
                      |+|.+||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            6666666654

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	836
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-23
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		9e-22
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-17
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-15
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-07
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-06
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-04
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		7e-10
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		5e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		6e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-10
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-07
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-09
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-05
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		5e-09
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		1e-04
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		8e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		6e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-04
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		8e-04
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-05
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-08
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-05
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-05
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-05
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		7e-08
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		7e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		4e-04
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-06
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		9e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-06
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-06
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		5e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-06
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-04
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		4e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-05
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-05
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-05
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		5e-04
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		6e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-05
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		3e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		6e-04
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		2e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		5e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 159 SSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTL 218
           SS  A   +    KPY C  CG+SF   + +  H    H   + Y C  C K++ D+K L
Sbjct: 7   SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDL 65
Query: 219 DNHILGHVDIKPYK---------QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETH 269
             H   H   KPYK         Q +NL++H R  HTGE+P+ C  C  +F +  HL  H
Sbjct: 66  TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT-HTGEKPYACPECGKSFSQLAHLRAH 124
Query: 270 VNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
              H G+ K + C  C  S S + NL  H R HT EKP+ C  C K F ++  +  H R 
Sbjct: 125 QRTHTGE-KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT 183

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  102 bits (254), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 32/200 (16%)
Query: 247 GERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEK 306
           GE+P+ C  C  +F    HL  H   H G+ K + C  C  S S K +L +H R HT EK
Sbjct: 18  GEKPYACPECGKSFSRSDHLAEHQRTHTGE-KPYKCPECGKSFSDKKDLTRHQRTHTGEK 76
Query: 307 PFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYL 366
           P+ C  C K F Q+ +++ H R                                +     
Sbjct: 77  PYKCPECGKSFSQRANLRAHQRT------------------------------HTGEKPY 106
Query: 367 LCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCK 426
            C +CG   S L  L+AH ++H   K P  C  CG +F    N   H R HTG KPY+C 
Sbjct: 107 ACPECGKSFSQLAHLRAHQRTHTGEK-PYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP 165
Query: 427 TCNASYASMRVLQHHEITHS 446
            C  S++    L  H+ TH+
Sbjct: 166 ECGKSFSRRDALNVHQRTHT 185

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 367 LCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCK 426
            C +CG   S  + L  H ++H   K P  C  CG +F    +   H R HTG KPY+C 
Sbjct: 23  ACPECGKSFSRSDHLAEHQRTHTGEK-PYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81
Query: 427 TCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQ 486
            C  S++    L+ H+ TH+    + C  CGK F++L ++  H + H       C  C +
Sbjct: 82  ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141
Query: 487 TMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQ 533
           + +    L  H   H  +  + C  C  SFS    L+ HQ    GK+
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 38/205 (18%)
Query: 597 DRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVF 656
           ++P++C  C  +F++   L  H+R H   KPYKC +C  S                    
Sbjct: 19  EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKS-------------------- 58
Query: 657 KCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRR 716
                   FS K    L RH++  H+ E   P KC  C +SF+  +NL AH   H   + 
Sbjct: 59  --------FSDKKD--LTRHQRT-HTGEK--PYKCPECGKSFSQRANLRAHQRTHTGEKP 105
Query: 717 FSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGY 776
           ++C  C  +F+ L++L  H+R      E  Y C  CGKS+  + +   H   H   K   
Sbjct: 106 YACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTGEK--- 160
Query: 777 TQRCHKCNATFRIKKFLTRHMKTHL 801
             +C +C  +F  +  L  H +TH 
Sbjct: 161 PYKCPECGKSFSRRDALNVHQRTHT 185

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 392 KQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKF 451
           ++P  C  CG +F  + N   H R HTG KPY+C  C  S++    LQ H+ TH+    +
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 452 PCINCGKYFTKLEYMIKHMKRHFN 475
            C  CGK F++ +++ +H + H N
Sbjct: 62  KCPECGKSFSRSDHLSRHQRTHQN 85

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 585 TNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKL 644
           +N   H R H  ++P+ C  C  +F+Q S L  H+R H   KPYKC +C  S     +  
Sbjct: 18  SNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCPECGKSFSRSDHLS 77
Query: 645 AHERIY 650
            H+R +
Sbjct: 78  RHQRTH 83

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 688 PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKY 747
           P KC  C +SF+  SNL  H   H   + + C  C  +F+  S+L +H+R      E  Y
Sbjct: 4   PYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTG--EKPY 61
Query: 748 VCNYCGKSYIDKRDYTNHVSVHMERK 773
            C  CGKS+      + H   H  +K
Sbjct: 62  KCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 744 EGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ 803
           E  Y C  CGKS+    +   H   H   K     +C +C  +F     L +H +TH  +
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEK---PYKCPECGKSFSQSSDLQKHQRTHTGE 58
Query: 804 --YRCTRCNKTFKQNTSFIRHSLKHFN 828
             Y+C  C K+F ++    RH   H N
Sbjct: 59  KPYKCPECGKSFSRSDHLSRHQRTHQN 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 250 PFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFN 309
           P +C+ C   F  K  L+TH+  H G  K + C  C+Y+++   +L +H RIH+DE+PF 
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTG-VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK 66
Query: 310 CSLCEKQFRQKIHVKNHLR 328
           C +C    R    +  HLR
Sbjct: 67  CQICPYASRNSSQLTVHLR 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 37/86 (43%)
Query: 394 PSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPC 453
           P  C VCG  F        HMR HTG KPY+CKTC+ + A    L  H   HS    F C
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 454 INCGKYFTKLEYMIKHMKRHFNTNKP 479
             C         +  H++ H   + P
Sbjct: 68  QICPYASRNSSQLTVHLRSHTGDSGP 93

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 595 GKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDH 654
           G   P  C +C   F++   L  H R H   KPYKC  C+Y+A   S+   H RI+  + 
Sbjct: 4   GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER 63
Query: 655 VFKCHINNCIFSTKFYSCLRRH 676
            FKC I  C ++++  S L  H
Sbjct: 64  PFKCQI--CPYASRNSSQLTVH 83

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 248 ERPFQC--KYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
           ERP+ C  + C+  F +K +L+TH+ +H G+ K F C +C  + S    L QH R HT E
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQ-KPFQCRICMRNFSQHTGLNQHIRTHTGE 60
Query: 306 KPFNCSLCEKQFR----QKIHVKNHLR 328
           KPF C +C ++F     +  H K HLR
Sbjct: 61  KPFACDICGRKFATLHTRDRHTKIHLR 87

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 392 KQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTL 449
           ++P  C V  C   F    N   H+R HTG KP+QC+ C  +++    L  H  TH+   
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 450 KFPCINCGKYFTKLEYMIKHMKRHF 474
            F C  CG+ F  L    +H K H 
Sbjct: 62  PFACDICGRKFATLHTRDRHTKIHL 86

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNK 643
           KTN + H+RIH   +PF C +C   F+Q + L  H R H   KP+ C  C      L  +
Sbjct: 19  KTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFATLHTR 78
Query: 644 LAHERIY 650
             H +I+
Sbjct: 79  DRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 248 ERPFQC--KYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
           ERP+ C  + C+  F +K +L+TH+ +H G+ K F C +C  + S + +L  H R HT E
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQ-KPFQCRICMRNFSQQASLNAHIRTHTGE 60
Query: 306 KPFNCSLCEKQFR----QKIHVKNHLR 328
           KPF C +C ++F     +  H K HLR
Sbjct: 61  KPFACDICGRKFATLHTRTRHTKIHLR 87

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNK 643
           KTN + H+RIH   +PF C +C   F+Q ++L  H R H   KP+ C  C      L  +
Sbjct: 19  KTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRKFATLHTR 78
Query: 644 LAHERIY 650
             H +I+
Sbjct: 79  TRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 688 PAKCKI--CNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEG 745
           P  C +  C++ F+  +NL+ H   H   + F C  C  NF+  ++L  H  I+    E 
Sbjct: 4   PYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAH--IRTHTGEK 61
Query: 746 KYVCNYCGKSYIDKRDYTNHVSVHMERKS 774
            + C+ CG+ +      T H  +H+ +K 
Sbjct: 62  PFACDICGRKFATLHTRTRHTKIHLRQKD 90

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 229 KPYKQLSNLQSHIRISHTGERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNVCN 286
           K Y +LS+LQ H R  HTGE+P+QC +  C   F     L+ H   H G  K F C  C 
Sbjct: 16  KRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG-VKPFQCKTCQ 73
Query: 287 YSSSLKWNLIQHYRIHTDEKPFNCSL--CEKQFRQKIHVKNHLRIIHNM 333
              S   +L  H R HT EKPF+C    C+K+F +   +  H    HNM
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH----HNM 118

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 364 SYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAV--CGDTFKTNYNYFVHMRRHTGFK 421
           +Y  C K  FK   L+ L+ H + H   K P  C    C   F  +     H RRHTG K
Sbjct: 10  AYPGCNKRYFK---LSHLQMHSRKHTGEK-PYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65
Query: 422 PYQCKTCNASYASMRVLQHHEITHSKTLKFPC--INCGKYFTKLEYMIKH 469
           P+QCKTC   ++    L+ H  TH+    F C   +C K F + + +++H
Sbjct: 66  PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 42/89 (47%)
Query: 392 KQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKF 451
           K+  IC  CG  F  +YN  +H R HT  +PY C  C+ ++     L+ H   HSK   F
Sbjct: 15  KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74
Query: 452 PCINCGKYFTKLEYMIKHMKRHFNTNKPV 480
            C  CGK F +   +  H   H  T+ P 
Sbjct: 75  KCQECGKGFCQSRTLAVHKTLHMQTSSPT 103

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 586 NFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCN 634
           N  IH R H  +RP++C +C+  F +   L +H  IH   KP+KC +C 
Sbjct: 32  NLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECG 80

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 248 ERPFQC--KYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
           ERP+ C  + C+  F +  +L  H+ +H G+ K F C +C  + S   +L  H R HT E
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 306 KPFNCSLCEKQF----RQKIHVKNHLR 328
           KPF C +C ++F     +K H K HLR
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIHLR 87

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 392 KQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTL 449
           ++P  C V  C   F  + N   H+R HTG KP+QC+ C  +++    L  H  TH+   
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 450 KFPCINCGKYFTKLEYMIKHMKRHF 474
            F C  CG+ F + +   +H K H 
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHL 86

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 577 DIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYS 636
           D  + DS +N   H+RIH   +PF C +C   F++   L  H R H   KP+ C  C   
Sbjct: 13  DRRFSDS-SNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 637 ARVLSNKLAHERIY 650
                 +  H +I+
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 688 PAKCKI--CNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEG 745
           P  C +  C++ F+  SNL  H   H   + F C  C  NF+   +L  H  I+    E 
Sbjct: 4   PYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH--IRTHTGEK 61
Query: 746 KYVCNYCGKSYIDKRDYTNHVSVHMERKS 774
            + C+ CG+ +    +   H  +H+ +K 
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 248 ERPFQC--KYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
           ERP+ C  + C+  F +   L  H+ +H G+ K F C +C  + S   +L  H R HT E
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 306 KPFNCSLCEKQF----RQKIHVKNHLR 328
           KPF C +C ++F     +K H K HLR
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIHLR 87

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 392 KQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTL 449
           ++P  C V  C   F  + +   H+R HTG KP+QC+ C  +++    L  H  TH+   
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 450 KFPCINCGKYFTKLEYMIKHMKRHF 474
            F C  CG+ F + +   +H K H 
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHL 86

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 248 ERPFQC--KYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
           ERP+ C  + C+  F     L  H+ +H G+ K F C +C  + S   +L  H R HT E
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 306 KPFNCSLCEKQF----RQKIHVKNHLR 328
           KPF C +C ++F     +K H K HLR
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIHLR 87

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 392 KQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTL 449
           ++P  C V  C   F  +     H+R HTG KP+QC+ C  +++    L  H  TH+   
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 450 KFPCINCGKYFTKLEYMIKHMKRHF 474
            F C  CG+ F + +   +H K H 
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHL 86

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 248 ERPFQC--KYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
           ERP+ C  + C+  F     L  H+ +H G+ K F C +C  + S   +L  H R HT E
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 306 KPFNCSLCEKQF----RQKIHVKNHLR 328
           KPF C +C ++F     +K H K HLR
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIHLR 87

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 392 KQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTL 449
           ++P  C V  C   F  +     H+R HTG KP+QC+ C  +++    L  H  TH+   
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 450 KFPCINCGKYFTKLEYMIKHMKRHF 474
            F C  CG+ F + +   +H K H 
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHL 86

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 248 ERPFQC--KYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
           ERP+ C  + C+  F     L  H+ +H G+ K F C +C  + S   +L  H R HT E
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGE 59
Query: 306 KPFNCSLCEKQF----RQKIHVKNHLR 328
           KPF C +C ++F     +K H K HLR
Sbjct: 60  KPFACDICGRKFARSDERKRHTKIHLR 86

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 392 KQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTL 449
           ++P  C V  C   F  +     H+R HTG KP+QC+ C  +++    L  H  TH+   
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 450 KFPCINCGKYFTKLEYMIKHMKRHF 474
            F C  CG+ F + +   +H K H 
Sbjct: 61  PFACDICGRKFARSDERKRHTKIHL 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 248 ERPFQC--KYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
           ERP+ C  + C+  F     L  H+ +H G+ K F C +C  + S   +L  H R HT E
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 306 KPFNCSLCEKQF----RQKIHVKNHLR 328
           KPF C +C ++F     +K H K HLR
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIHLR 87

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 392 KQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTL 449
           ++P  C V  C   F  +     H+R HTG KP+QC+ C  +++    L  H  TH+   
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 450 KFPCINCGKYFTKLEYMIKHMKRHF 474
            F C  CG+ F + +   +H K H 
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHL 86

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 248 ERPFQC--KYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
           ERP+ C  + C+  F     L  H+ +H G+ K F C +C  + S   +L  H R HT E
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 306 KPFNCSLCEKQF----RQKIHVKNHLR 328
           KPF C +C ++F     +K H K HLR
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIHLR 87

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 392 KQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTL 449
           ++P  C V  C   F  + +   H+R HTG KP+QC+ C  +++    L  H  TH+   
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 450 KFPCINCGKYFTKLEYMIKHMKRHF 474
            F C  CG+ F + +   +H K H 
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHL 86

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNY 203
           K Y C+ CG +F HKS RD H ++H  L+PY C  CG+ F+  + +  H +  H  ++ Y
Sbjct: 9   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHTGIKPY 66
Query: 204 LCNFCNKTYKDRKTLDNHI 222
            CN C K +  R +   H+
Sbjct: 67  ECNICAKRFMWRDSFHRHV 85

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 246 TGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
           +G++ + C+ C  +F  K   + H+++HLG  + + C VC     +K +L+ H +IHT  
Sbjct: 6   SGDKLYPCQ-CGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63
Query: 306 KPFNCSLCEKQF 317
           KP+ C++C K+F
Sbjct: 64  KPYECNICAKRF 75

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 387 SHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTC 428
           S H   +P  C VCG  FK  ++   HM+ HTG KPY+C  C
Sbjct: 30  SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNIC 71

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 202 NYLCNFCNKTYKDRKTLDNHILGHVDIKPYK---------QLSNLQSHIRISHTGERPFQ 252
           ++ C  C K++K   TL  H+L H D +PY          Q S+++ H  I HTGE+P +
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI-HTGEKPHK 59
Query: 253 CKYCNYAFKEKHHLETHVNLHLG 275
           C+ C  AF +  +L TH   H G
Sbjct: 60  CQVCGKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 251 FQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNC 310
           F CK C  +FK    L TH+ +H   T+ + C  C      K ++ +H  IHT EKP  C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIH-SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 311 SLCEKQFRQKIHVKNHLR 328
            +C K F Q  ++  H R
Sbjct: 61  QVCGKAFSQSSNLITHSR 78

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 585 TNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKL 644
           +  + H+ IH   RP+ C  C   F Q S +  H  IH   KP+KC  C  +    SN +
Sbjct: 15  STLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLI 74
Query: 645 AHER 648
            H R
Sbjct: 75  THSR 78

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 245 HTGERPFQCKYCNYAFKEKHHLETHV--NLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIH 302
           HTGE+PF+C  C   +  K +L  H   N      + F C+VC  +   +  L  H   H
Sbjct: 30  HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSH 89
Query: 303 TDEKPFNCSLCEKQFRQKIHVKNHLRIIHN 332
           T E P+ CS C +QF QK  +++H+  +H+
Sbjct: 90  TGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 418 TGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRH-FNT 476
           +G    +C TC+  + S   L+ H   H+    F C  CGK + + E +++H  R+  N 
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 477 NKPV--CEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAH 530
           ++ V  C +C +T      L+ HM  H  +  + C+ C+  F     L  H I+ H
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 398 AVCGDTFKTNYNYFVHMRRHTGFKPYQCK--TCNASYASMRVLQHHEITHSKTLKFPCIN 455
           A CG T+  + +   H+R HTG KPY C    C   +A    L  H   H+    F C  
Sbjct: 11  AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK 70
Query: 456 CGKYFTKLEYMIKHMKRHF 474
           C + F++ +++  HMKRHF
Sbjct: 71  CDRAFSRSDHLALHMKRHF 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 398 AVCGDTFKTNYNYFVHMRRHTGFKPYQCK--TCNASYASMRVLQHHEITHSKTLKFPCIN 455
           A CG T+  + +   H+R HTG KPY C    C   +A    L  H   H+    F C  
Sbjct: 12  AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK 71
Query: 456 CGKYFTKLEYMIKHMKRHF 474
           C + F++ +++  HMKRHF
Sbjct: 72  CDRAFSRSDHLALHMKRHF 90

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 229 KPYKQLSNLQSHIRISHT-GERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNV--C 285
           K ++  S ++ H+   HT G R   C  C  AF E   L+ H  +H G+ K F C    C
Sbjct: 15  KMFRDNSAMRKHL---HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE-KPFQCTFEGC 70
Query: 286 NYSSSLKWNLIQHYRIHTDEKPFNCSL--CEKQFRQKIHVKNHL 327
               SL +NL  H RIHT ++P+ C    C K+F Q  ++K+H+
Sbjct: 71  GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 367 LCWKCGFKTSVLNELKAHIKSHHFPKQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQ 424
           +C +CG      ++LK H +  H  ++P  C    CG  F  ++N   H+R HTG +PY 
Sbjct: 36  VCAECGKAFVESSKLKRH-QLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV 94
Query: 425 C--KTCNASYASMRVLQHHEITHSKT 448
           C    CN  +A    L+ H +TH+K 
Sbjct: 95  CPFDGCNKKFAQSTNLKSHILTHAKA 120

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 404 FKTNYNYFVHMRRHTGFKPYQC--KTCNASYASMRVLQHHEITHSKTLKFPC--INCGKY 459
           FK  Y   VHMRRHTG KP++C  + C  SY+ +  L+ H  +H+    + C    C K 
Sbjct: 49  FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA 108
Query: 460 FTKLEYMIKHMKRHFNTNKP-VCEI--CSQTMAHNQVLQRHM-TLH 501
           F+      KH  R  +  KP VC++  C++       L++H+ T+H
Sbjct: 109 FSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 74/181 (40%), Gaps = 40/181 (22%)
Query: 510 NRCNASFSSMVQLSCHQIRA---HGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTL 566
           + C+  F S  QL  H I +   HG++K+ F+CH  G                   +R L
Sbjct: 7   DGCSQEFDSQEQL-VHHINSEHIHGERKE-FVCHWGGC------------------SREL 46
Query: 567 PPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLL--CNNTFAQLSTLLNHERIHDN 624
            P     FK    YM       +HMR H  ++P  C    C  ++++L  L  H R H  
Sbjct: 47  RP-----FK--AQYM-----LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG 94
Query: 625 HKPYKC--TKCNYSARVLSNKLAHE-RIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFH 681
            KPY C    C+ +    S++  H+ R +  +  + C +  C       S LR+H K  H
Sbjct: 95  EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Query: 682 S 682
Sbjct: 155 G 155

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 597 DRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIY 650
           ++P+ C+ C   F++ S L+ H+R+H   KPYKC +C  +    S  + H+RI+
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 248 ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
           ++P++C  C  +F+ K +L +H  +H G+ K + CN+C    +   NL  H RIH+ EKP
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGE-KPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 397 CAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFP--CI 454
           C +CG  F+  Y+   H   H+G KPY C  C   +     + +H  +H  ++  P  C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 455 NCGKYFTKLEYMIKHMKR 472
           +CGK F++ +++  H+K+
Sbjct: 70  SCGKGFSRPDHLNGHIKQ 87

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 398 AVCGDTFKTNYNYFVHMRRHTGFKPYQCK--TCNASYASMRVLQHHEITHSKTLKFPCIN 455
           A CG  +  N+    H+ +HTG KP+ CK   C   + S+  L  H +TH+    F C +
Sbjct: 18  ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDS 77
Query: 456 CGKYFTKLEYMIK-HMKRHFNT--NKPVC------EICSQTMAHNQVLQRHMTLHFTQNK 506
            G     L +  K +MK+HFN   N  +C      E C +    +  L+ H   H  Q  
Sbjct: 78  DG---CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP 134
Query: 507 HPC--NRCNASFSSMVQLSCHQ 526
           + C    C+  FS   +L  H+
Sbjct: 135 YECPHEGCDKRFSLPSRLKRHE 156

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 9/103 (8%)
Query: 90  KSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACK 149
           + K K + H    V     Y CI C+  Y C             + H  IH   K Y C+
Sbjct: 4   RMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTS---------LRRHFNIHSWEKKYPCR 54
Query: 150 YCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRH 192
           YC   F     R  H+  HT  + Y CL CG+SF  +  M  H
Sbjct: 55  YCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSH 97

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 691 CKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCN 750
           C +C +S+   ++L  H+N H   +++ C  C   F       +H    H   E +Y C 
Sbjct: 25  CIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHE--IHHTGERRYQCL 82
Query: 751 YCGKSYIDKRDYTNHV-SVHMERKSGYTQ--RCHKCNA 785
            CGKS+I+ +  ++H+ SVH +  SG ++  R H C +
Sbjct: 83  ACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRS 120

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 228 IKPYKQLSNLQSHIRISHTGERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNVC 285
            K Y + S+L++H+R +HTGE+P++C +  C++ F     L  H   H G  K F C VC
Sbjct: 24  TKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG-AKPFQCGVC 81
Query: 286 NYSSSLKWNLIQHYRIH 302
           N S S   +L  H + H
Sbjct: 82  NRSFSRSDHLALHMKRH 98

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 412 VHMRRHTGFKPYQC--KTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKH 469
            H+R HTG KPY+C  + C+  +A    L  H   H+    F C  C + F++ +++  H
Sbjct: 35  AHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALH 94
Query: 470 MKRHFN 475
           MKRH N
Sbjct: 95  MKRHQN 100

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 279 SFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCD 337
           SF C VC  + + + +L +HYR HT+EKP+ C LC + F ++  +  H + IH+ N  +
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNLGE 60

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 398 AVCGDTFKTNYNYFVHMRRHTGFKPYQCK--TCNASYASMRVLQHHEITHSKTLKFPCIN 455
           A CG  +  N+    H+ +HTG KP+ CK   C   + S+  L  H +TH+    F C +
Sbjct: 9   ADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDS 68
Query: 456 CGKYFTKLEYMIK-HMKRHFN 475
            G     L +  K +MK+HFN
Sbjct: 69  DG---CDLRFTTKANMKKHFN 86

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 20/129 (15%)
Query: 54  CGQFFLDLGRLNAHIRQRHTSNKK------IYYKCDKCNKTYKSKYKFERHKNTHVTENS 107
           C + F  +  L  H+   H    +       + +C +  K++K+KYK   H   H  E  
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP 90
Query: 108 EYPCIY--CRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKY--CGNAFAHKSSRDA 163
            +PC +  C  I+  S          + K H R H   KP+ C++  C   FA+ S R  
Sbjct: 91  -FPCPFPGCGKIFARS---------ENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKK 140
Query: 164 HQNIHTDLK 172
           H ++HT  K
Sbjct: 141 HMHVHTSDK 149

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 254 KYCNYAFKEKHHLETHVNL-HLGKTKSFN-------CNVCNYSSSLKWNLIQHYRIHTDE 305
           K C+  F   H L THV + H+G  +  N       C     S   K+ L+ H R+HT E
Sbjct: 29  KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE 88
Query: 306 KPFNCSL--CEKQFRQKIHVKNHLRI 329
           KPF C    C K F +  ++K H R 
Sbjct: 89  KPFPCPFPGCGKIFARSENLKIHKRT 114

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 262 EKHHLETHVNLHLGKTKSFNCNV--CNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQ 319
           E H +   +N  + K + + C V  C+   S    L +H RIHT +KPF C +C + F +
Sbjct: 2   EPHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR 61
Query: 320 KIHVKNHLR 328
             H+  H+R
Sbjct: 62  SDHLTTHIR 70

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 397 CAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSK 447
           C+ CG  F++NY   +H+R HTG KPY+C+ C  + A    L++H   H K
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK 57

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 278 KSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           + + C+ C  S S   +L +H R HT EKP+ C  C K F Q+ H+  H R+
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	836
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-34
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-23
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-23
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-16
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-15
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-11
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-17
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-16
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-20
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-15
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-15
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-14
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-12
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-20
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-18
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-19
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-15
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-19
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-09
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-18
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-18
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-17
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-15
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-14
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-11
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-11
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	7e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	9e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	8e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	7e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	6e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	8e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	6e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	5e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	8e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	5e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	7e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  129 bits (327), Expect = 2e-34
 Identities = 66/202 (32%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 132 HFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKR 191
              A   +    KPYAC  CG +F+       HQ  HT  KPY C  CG+SF       +
Sbjct: 8   SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFS-----DK 62

Query: 192 HNLCDHQDV----RNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTG 247
            +L  HQ      + Y C  C K++  R                   +NL++H R  HTG
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQR-------------------ANLRAHQRT-HTG 102

Query: 248 ERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
           E+P+ C  C  +F +  HL  H   H G+ K + C  C  S S + NL  H R HT EKP
Sbjct: 103 EKPYACPECGKSFSQLAHLRAHQRTHTGE-KPYKCPECGKSFSREDNLHTHQRTHTGEKP 161

Query: 308 FNCSLCEKQFRQKIHVKNHLRI 329
           + C  C K F ++  +  H R 
Sbjct: 162 YKCPECGKSFSRRDALNVHQRT 183

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 98.3 bits (246), Expect = 1e-23
 Identities = 71/279 (25%), Positives = 94/279 (33%), Gaps = 93/279 (33%)

Query: 30  FSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQR-HTSNKKIYYKCDKCNKT 88
               ++      +    +P  C  CG+ F     L  H  QR HT  K   YKC +C K+
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH--QRTHTGEKP--YKCPECGKS 58

Query: 89  YKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYAC 148
           +  K    RH+ TH     E P       Y C  C      R + +AH R H   KPYAC
Sbjct: 59  FSDKKDLTRHQRTH---TGEKP-------YKCPECGKSFSQRANLRAHQRTHTGEKPYAC 108

Query: 149 KYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFC 208
             CG +F+  +   AHQ  HT  KPY C  CG+SF                         
Sbjct: 109 PECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFS------------------------ 144

Query: 209 NKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLET 268
                                   +  NL +H R  HTGE+P++C  C  +F  +     
Sbjct: 145 ------------------------REDNLHTHQRT-HTGEKPYKCPECGKSFSRRDA--- 176

Query: 269 HVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP 307
                                     L  H R HT +K 
Sbjct: 177 --------------------------LNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 97.9 bits (245), Expect = 1e-23
 Identities = 71/276 (25%), Positives = 91/276 (32%), Gaps = 95/276 (34%)

Query: 154 AFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYK 213
           +    SS  A   +    KPY C  CG+SF                              
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFS----------------------------- 32

Query: 214 DRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLH 273
                              +  +L  H R  HTGE+P++C  C  +F +K  L  H   H
Sbjct: 33  -------------------RSDHLAEHQRT-HTGEKPYKCPECGKSFSDKKDLTRHQRTH 72

Query: 274 LGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNM 333
            G+ K + C  C  S S + NL  H R HT EKP+ C  C K F Q  H++ H R     
Sbjct: 73  TGE-KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT---- 127

Query: 334 NFCDHCFKFVGPEQELNIFRH-------CEVCDKSNNSYLLCWKCGFKTSVLNELKAHIK 386
                               H       C  C KS           F     + L  H +
Sbjct: 128 --------------------HTGEKPYKCPECGKS-----------FSRE--DNLHTHQR 154

Query: 387 SHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKP 422
           +H   K P  C  CG +F       VH R HTG K 
Sbjct: 155 THTGEK-PYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 87.5 bits (218), Expect = 6e-20
 Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 15/190 (7%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNK 643
            ++      +   ++P++C  C  +F++   L  H+R H   KPYKC +C  S     + 
Sbjct: 6   SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65

Query: 644 LAHERIYHQDHVFKCHINNC--IFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALF 701
             H+R +  +  +KC    C   FS +  + LR H++  H+ E   P  C  C +SF+  
Sbjct: 66  TRHQRTHTGEKPYKC--PECGKSFSQR--ANLRAHQRT-HTGEK--PYACPECGKSFSQL 118

Query: 702 SNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGK--YVCNYCGKSYIDK 759
           ++L AH   H   + + C  C  +F+   NL  H+R     H G+  Y C  CGKS+  +
Sbjct: 119 AHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT----HTGEKPYKCPECGKSFSRR 174

Query: 760 RDYTNHVSVH 769
                H   H
Sbjct: 175 DALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 87.1 bits (217), Expect = 9e-20
 Identities = 60/248 (24%), Positives = 85/248 (34%), Gaps = 79/248 (31%)

Query: 235 SNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWN 294
           S+  +   +   GE+P+ C  C  +F    HL                            
Sbjct: 7   SSSVAQAAL-EPGEKPYACPECGKSFSRSDHL---------------------------- 37

Query: 295 LIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRH 354
             +H R HT EKP+ C  C K F  K  +  H R                         H
Sbjct: 38  -AEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT------------------------H 72

Query: 355 -------CEVCDK--SNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFK 405
                  C  C K  S  + L                AH ++H   K P  C  CG +F 
Sbjct: 73  TGEKPYKCPECGKSFSQRANLR---------------AHQRTHTGEK-PYACPECGKSFS 116

Query: 406 TNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEY 465
              +   H R HTG KPY+C  C  S++    L  H+ TH+    + C  CGK F++ + 
Sbjct: 117 QLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDA 176

Query: 466 MIKHMKRH 473
           +  H + H
Sbjct: 177 LNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 77.9 bits (193), Expect = 1e-16
 Identities = 57/182 (31%), Positives = 71/182 (39%), Gaps = 48/182 (26%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQR-HTSNK 76
           E+ Y CP C K FS    L RH   H   +P +C  CG+ F     L AH  QR HT  K
Sbjct: 47  EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH--QRTHTGEK 104

Query: 77  KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
              Y C +C K++                                          H +AH
Sbjct: 105 P--YACPECGKSF--------------------------------------SQLAHLRAH 124

Query: 137 LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
            R H   KPY C  CG +F+ + +   HQ  HT  KPY C  CG+SF      +R  L  
Sbjct: 125 QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFS-----RRDALNV 179

Query: 197 HQ 198
           HQ
Sbjct: 180 HQ 181

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 72.9 bits (180), Expect = 8e-15
 Identities = 54/227 (23%), Positives = 86/227 (37%), Gaps = 41/227 (18%)

Query: 403 TFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTK 462
           +   + +         G KPY C  C  S++    L  H+ TH+    + C  CGK F+ 
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 463 LEYMIKHMKRHFNTN-KP-VCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMV 520
            + + +H + H  T  KP  C  C ++ +    L+ H   H  +  + C  C  SFS + 
Sbjct: 62  KKDLTRHQRTH--TGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLA 119

Query: 521 QLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVY 580
            L  HQ R H  +K  + C  CG                            + F      
Sbjct: 120 HLRAHQ-RTHTGEKP-YKCPECG----------------------------KSFSR---- 145

Query: 581 MDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKP 627
              + N + H R H  ++P+ C  C  +F++   L  H+R H   K 
Sbjct: 146 ---EDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 63.2 bits (155), Expect = 1e-11
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 6/149 (4%)

Query: 397 CAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINC 456
           C  CG +F  + +   H R HTG KPY+C  C  S++  + L  H+ TH+    + C  C
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC 83

Query: 457 GKYFTKLEYMIKHMKRHFNTN-KP-VCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNA 514
           GK F++   +  H + H  T  KP  C  C ++ +    L+ H   H  +  + C  C  
Sbjct: 84  GKSFSQRANLRAHQRTH--TGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141

Query: 515 SFSSMVQLSCHQIRAHGKQKQRFMCHRCG 543
           SFS    L  HQ R H  +K  + C  CG
Sbjct: 142 SFSREDNLHTHQ-RTHTGEKP-YKCPECG 168

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 51.3 bits (124), Expect = 2e-07
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 11/103 (10%)

Query: 724 LNFTYLSNLIRHRRIKHSQHEGK--YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCH 781
           ++    S+ +    +      G+  Y C  CGKS+        H   H   K  Y   C 
Sbjct: 1   ISEFGSSSSVAQAAL----EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKP-YK--CP 53

Query: 782 KCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRH 822
           +C  +F  KK LTRH +TH  +  Y+C  C K+F Q  +   H
Sbjct: 54  ECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH 96

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 92.7 bits (231), Expect = 1e-21
 Identities = 41/214 (19%), Positives = 70/214 (32%), Gaps = 42/214 (19%)

Query: 135 AHLRIHLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDLKPYLC--LTCGQSFRTFNLMK 190
               + +  K Y C +  CG A+       AH   HT  KP+ C    C + F       
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFT-----S 56

Query: 191 RHNLCDHQDV----RNYLCN--FCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRIS 244
            H+L  H       +N+ C+   C+  +                      +N++ H    
Sbjct: 57  LHHLTRHSLTHTGEKNFTCDSDGCDLRFT-------------------TKANMKKHFNR- 96

Query: 245 HTGER--PFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCN--VCNYSSSLKWNLIQH 298
               +   + C +  C  AFK+ + L+ H   H  +   + C    C+   SL   L +H
Sbjct: 97  FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ-LPYECPHEGCDKRFSLPSRLKRH 155

Query: 299 YRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHN 332
            ++H          C    +       H+   H 
Sbjct: 156 EKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 45/192 (23%), Positives = 66/192 (34%), Gaps = 21/192 (10%)

Query: 18  ERTYHC--PLCSKQFSKLTTLKRHVGIHMKTQPVRC--GYCGQFFLDLGRLNAHIRQRHT 73
            + Y C    C   ++K   L+ H+  H   +P  C    C + F  L  L  H    HT
Sbjct: 10  YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT-HT 68

Query: 74  SNKKIYYKCD--KCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSF--CAYRGRY 129
             K   + CD   C+  + +K   ++H N                 Y C F  C    + 
Sbjct: 69  GEKN--FTCDSDGCDLRFTTKANMKKHFNRF-HNIKICV-------YVCHFENCGKAFKK 118

Query: 130 RYHFKAHLRIHLNIKPYACK--YCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFN 187
               K H   H    PY C    C   F+  S    H+ +H         +C    +T+ 
Sbjct: 119 HNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWT 178

Query: 188 LMKRHNLCDHQD 199
           L  +H    HQD
Sbjct: 179 LYLKHVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 75.7 bits (187), Expect = 6e-16
 Identities = 47/249 (18%), Positives = 69/249 (27%), Gaps = 81/249 (32%)

Query: 240 HIRISHTGERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQ 297
              +     + + C +  C                      ++N N         W L  
Sbjct: 3   EKAL-PVVYKRYICSFADCG--------------------AAYNKN---------WKLQA 32

Query: 298 HYRIHTDEKPFNCS--LCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRH- 354
           H   HT EKPF C    CEK F    H+  H                           H 
Sbjct: 33  HLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT------------------------HT 68

Query: 355 ------CEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQ-PSICAV--CGDTFK 405
                 C+              C  + +    +K H    H  K    +C    CG  FK
Sbjct: 69  GEKNFTCDSDG-----------CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFK 117

Query: 406 TNYNYFVHMRRHTGFKPYQCK--TCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKL 463
            +    VH   HT   PY+C    C+  ++    L+ HE  H+        +C       
Sbjct: 118 KHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW 177

Query: 464 EYMIKHMKR 472
              +KH+  
Sbjct: 178 TLYLKHVAE 186

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 73.8 bits (182), Expect = 3e-15
 Identities = 52/248 (20%), Positives = 79/248 (31%), Gaps = 67/248 (27%)

Query: 413 HMRRHTGFKPYQCKT--CNASYASMRVLQHHEITHSKTLKFPC--INCGKYFTKLEYMIK 468
                  +K Y C    C A+Y     LQ H   H+    FPC    C K FT L ++ +
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 469 HMKRHFNT-NKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQI 527
           H   H  T  K     C                         + C+  F++   +  H  
Sbjct: 63  HSLTH--TGEKNF--TCDS-----------------------DGCDLRFTTKANMKKHFN 95

Query: 528 RAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNF 587
           R H  +   ++CH                   CG          + FK            
Sbjct: 96  RFHNIKICVYVCHF----------------ENCG----------KAFKK-------HNQL 122

Query: 588 NIHMRIHGKDRPFSC--LLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLA 645
            +H   H +  P+ C    C+  F+  S L  HE++H  +   K   C++  +  +  L 
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182

Query: 646 HERIYHQD 653
           H    HQD
Sbjct: 183 HVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 69.9 bits (172), Expect = 6e-14
 Identities = 39/169 (23%), Positives = 61/169 (36%), Gaps = 15/169 (8%)

Query: 584 KTNFNIHMRIHGKDRPFSC--LLCNNTFAQLSTLLNHERIHDNHKPYKCT--KCNYSARV 639
                 H+  H  ++PF C    C   F  L  L  H   H   K + C    C+     
Sbjct: 27  NWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT 86

Query: 640 LSNKLAHERIYH--QDHVFKCHINNC--IFSTKFYSCLRRHRKIFHSNESYAPAKCK--I 693
            +N   H   +H  +  V+ CH  NC   F     + L+ H+   H+ +   P +C    
Sbjct: 87  KANMKKHFNRFHNIKICVYVCHFENCGKAFKKH--NQLKVHQFS-HTQQL--PYECPHEG 141

Query: 694 CNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQ 742
           C++ F+L S L  H   H         +CS      +  ++H    H  
Sbjct: 142 CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 63.0 bits (154), Expect = 2e-11
 Identities = 44/244 (18%), Positives = 70/244 (28%), Gaps = 68/244 (27%)

Query: 590 HMRIHGKDRPFSCLL--CNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHE 647
              +    + + C    C   + +   L  H   H   KP                    
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKP-------------------- 42

Query: 648 RIYHQDHVFKCHINNC--IFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLN 705
                   F C    C   F++     L RH    H+ E      C              
Sbjct: 43  --------FPCKEEGCEKGFTSL--HHLTRHSLT-HTGEK--NFTCDSDG---------- 79

Query: 706 AHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNY--CGKSYIDKRDYT 763
                           C L FT  +N+ +H    H+     YVC++  CGK++       
Sbjct: 80  ----------------CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLK 123

Query: 764 NHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTH--LIQYRCTRCNKTFKQNTSFIR 821
            H   H ++   Y      C+  F +   L RH K H      +   C+   K  T +++
Sbjct: 124 VHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182

Query: 822 HSLK 825
           H  +
Sbjct: 183 HVAE 186

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 87.6 bits (218), Expect = 1e-20
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 14/115 (12%)

Query: 229 KPYK---------QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETH---VNLHLGK 276
              +             L+ H R  HTGE+PF+C  C   +  K +L  H     ++  +
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64

Query: 277 TKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIH 331
            + F C+VC  +   +  L  H   HT E P+ CS C +QF QK  +++H+  +H
Sbjct: 65  -QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 82.2 bits (204), Expect = 9e-19
 Identities = 30/166 (18%), Positives = 48/166 (28%), Gaps = 52/166 (31%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNY 203
               C  C   F  K     H   HT  KP+ C  CG+ +                    
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYF------------------- 46

Query: 204 LCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRIS--HTGERPFQCKYCNYAFK 261
                                        +  NL  H   +  +  E+ F C  C   F+
Sbjct: 47  -----------------------------RKENLLEHEARNCMNRSEQVFTCSVCQETFR 77

Query: 262 EKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH-YRIHTDEK 306
            +  L  H+  H G+   + C+ C+     K +L  H  ++H+   
Sbjct: 78  RRMELRLHMVSHTGE-MPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 74.8 bits (185), Expect = 3e-16
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 245 HTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYR---I 301
            +G    +C  C+  F  K++L+ H   H G+ K F C  C      K NL++H     +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGE-KPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 302 HTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           +  E+ F CS+C++ FR+++ ++ H+  
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVS 88

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 66.0 bits (162), Expect = 3e-13
 Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 18/122 (14%)

Query: 80  YKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLR- 138
            +C  C+K + SKY  + H   H  E            + C  C      + +   H   
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKP----------FECPKCGKCYFRKENLLEHEAR 57

Query: 139 --IHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCD 196
             ++ + + + C  C   F  +     H   HT   PY C +C Q F      ++ +L  
Sbjct: 58  NCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFM-----QKKDLQS 112

Query: 197 HQ 198
           H 
Sbjct: 113 HM 114

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 66.0 bits (162), Expect = 4e-13
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 31/139 (22%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQ---NIHTDLKPY 174
             C  C  +   +Y+ K H R H   KP+ C  CG  +  K +   H+    ++   + +
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 175 LCLTCGQSFRTFNLMKRHNLCDHQDV----RNYLCNFCNKTYKDRKTLDNHILGHVDIKP 230
            C  C ++FR     +R  L  H         Y C+ C++ +                  
Sbjct: 68  TCSVCQETFR-----RRMELRLHMVSHTGEMPYKCSSCSQQFM----------------- 105

Query: 231 YKQLSNLQSHIRISHTGER 249
             Q  +LQSH+   H+G  
Sbjct: 106 --QKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 59.8 bits (146), Expect = 6e-11
 Identities = 31/155 (20%), Positives = 46/155 (29%), Gaps = 43/155 (27%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQR--HTSN 75
                CP C K+F     LK H   H   +P  C  CG+ +     L  H  +   + S 
Sbjct: 5   SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64

Query: 76  KKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKA 135
           +   + C  C +T+                                      R R   + 
Sbjct: 65  QV--FTCSVCQETF--------------------------------------RRRMELRL 84

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQN-IHT 169
           H+  H    PY C  C   F  K    +H   +H+
Sbjct: 85  HMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 56.7 bits (138), Expect = 5e-10
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 5/118 (4%)

Query: 417 HTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNT 476
            +G    +C TC+  + S   L+ H   H+    F C  CGK + + E +++H       
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHE-ARNCM 60

Query: 477 N---KP-VCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAH 530
           N   +   C +C +T      L+ HM  H  +  + C+ C+  F     L  H I+ H
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 56.7 bits (138), Expect = 6e-10
 Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 14/113 (12%)

Query: 717 FSCTNCSLNFTYLSNLIRHRRIKHSQHEGK--YVCNYCGKSYIDKRDYTNH---VSVHME 771
             C  C   F     L  H R     H G+  + C  CGK Y  K +   H     ++  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRK----HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63

Query: 772 RKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRH 822
            +  +T  C  C  TFR +  L  HM +H  +  Y+C+ C++ F Q      H
Sbjct: 64  EQV-FT--CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 56.4 bits (137), Expect = 9e-10
 Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 5/107 (4%)

Query: 397 CAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHE---ITHSKTLKFPC 453
           C  C   F + Y   VH R+HTG KP++C  C   Y     L  HE     +     F C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69

Query: 454 INCGKYFTKLEYMIKHMKRHFNTNKP-VCEICSQTMAHNQVLQRHMT 499
             C + F +   +  HM  H     P  C  CSQ     + LQ HM 
Sbjct: 70  SVCQETFRRRMELRLHMVSH-TGEMPYKCSSCSQQFMQKKDLQSHMI 115

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 54.8 bits (133), Expect = 3e-09
 Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 14/116 (12%)

Query: 598 RPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDH--- 654
               C  C+  F     L  H R H   KP++C KC        N L HE   +  +   
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEA-RNCMNRSE 64

Query: 655 -VFKCHINNC--IFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAH 707
            VF C  + C   F  +    LR H    H+ E   P KC  C+Q F    +L +H
Sbjct: 65  QVFTC--SVCQETFRRR--MELRLHMVS-HTGEM--PYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 52.9 bits (128), Expect = 2e-08
 Identities = 32/149 (21%), Positives = 49/149 (32%), Gaps = 46/149 (30%)

Query: 302 HTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRH------- 354
            +      C  C K+F  K ++K H R                         H       
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRK------------------------HTGEKPFE 37

Query: 355 CEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSH--HFPKQPSICAVCGDTFKTNYNYFV 412
           C  C K            +       L  H   +  +  +Q   C+VC +TF+      +
Sbjct: 38  CPKCGKC-----------YFRK--ENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRL 84

Query: 413 HMRRHTGFKPYQCKTCNASYASMRVLQHH 441
           HM  HTG  PY+C +C+  +   + LQ H
Sbjct: 85  HMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 49.8 bits (120), Expect = 2e-07
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 584 KTNFNIHMR---IHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC 633
           K N   H     ++  ++ F+C +C  TF +   L  H   H    PYKC+ C
Sbjct: 48  KENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSC 100

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 87.6 bits (218), Expect = 2e-20
 Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 25/167 (14%)

Query: 172 KPYLCLTCGQSFRTFNLMKRHNLCD--HQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIK 229
                  C Q F +   +  H   +  H + + ++C++   + +               +
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSREL--------------R 47

Query: 230 PYKQLSNLQSHIRISHTGERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCN--VC 285
           P+K    L  H+R  HTGE+P +C +  C  ++    +L+TH+  H G+ K + C    C
Sbjct: 48  PFKAQYMLVVHMRR-HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGE-KPYMCEHEGC 105

Query: 286 NYSSSLKWNLIQH-YRIHTDEKPFNCSL--CEKQFRQKIHVKNHLRI 329
           + + S   +  +H  R H++EKP+ C L  C K++     ++ H++ 
Sbjct: 106 SKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 12/114 (10%)

Query: 229 KPYKQLSNLQSHIRIS--HTGERPFQCKYCNY-----AFKEKHHLETHVNLHLGKTKSFN 281
           + +     L  HI     H   + F C +         FK ++ L  H+  H G+ K   
Sbjct: 11  QEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE-KPHK 69

Query: 282 CNV--CNYSSSLKWNLIQHYRIHTDEKPFNC--SLCEKQFRQKIHVKNHLRIIH 331
           C    C  S S   NL  H R HT EKP+ C    C K F        H    H
Sbjct: 70  CTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 39/204 (19%), Positives = 67/204 (32%), Gaps = 60/204 (29%)

Query: 80  YKCDKCNKTYKSKYKFERHKNTHV--TENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
            + D C++ + S+ +   H N+     E  E+ C +      CS      + +Y    H+
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG----CSRELRPFKAQYMLVVHM 59

Query: 138 RIHLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDLKPYLC--LTCGQSFRTFNLMKRHN 193
           R H   KP+ C +  C  +++   +   H   HT  KPY+C    C ++F          
Sbjct: 60  RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFS--------- 110

Query: 194 LCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQC 253
                                                    S+   H   +H+ E+P+ C
Sbjct: 111 ---------------------------------------NASDRAKHQNRTHSNEKPYVC 131

Query: 254 KY--CNYAFKEKHHLETHVNLHLG 275
           K   C   + +   L  HV    G
Sbjct: 132 KLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 43/183 (23%), Positives = 70/183 (38%), Gaps = 42/183 (22%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVG---IHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTS 74
           E       CS++F     L  H+    IH + +   C + G                   
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG------------------- 41

Query: 75  NKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFK 134
                  C +  + +K++Y    H   H  E   + C +      C     R     + K
Sbjct: 42  -------CSRELRPFKAQYMLVVHMRRHTGEKP-HKCTFEG----CRKSYSR---LENLK 86

Query: 135 AHLRIHLNIKPYACKY--CGNAFAHKSSRDAHQN-IHTDLKPYLCLT--CGQSFRTFNLM 189
            HLR H   KPY C++  C  AF++ S R  HQN  H++ KPY+C    C + +   + +
Sbjct: 87  THLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSL 146

Query: 190 KRH 192
           ++H
Sbjct: 147 RKH 149

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 248 ERPFQCKYCNYAFKEKHHLETHVNLHLGKT--KSFNCNVCNYSSSLK-----WNLIQHYR 300
           E   +   C+  F  +  L  H+N        K F C+    S  L+     + L+ H R
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 301 IHTDEKPFNCSL--CEKQFRQKIHVKNHLRI 329
            HT EKP  C+   C K + +  ++K HLR 
Sbjct: 61  RHTGEKPHKCTFEGCRKSYSRLENLKTHLRS 91

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 368 CWKCGFKTSVLNELKAHIKSH--HFPKQPSICAVCGDT-----FKTNYNYFVHMRRHTGF 420
              C  +     +L  HI S   H  ++  +C   G +     FK  Y   VHMRRHTG 
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 65

Query: 421 KPYQCKT--CNASYASMRVLQHHEITHSKTLKFPC--INCGKYFTKLEYMIKHMKR-HFN 475
           KP++C    C  SY+ +  L+ H  +H+    + C    C K F+      KH  R H N
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125

Query: 476 TNKP-VCEI--CSQTMAHNQVLQRHMTLH 501
             KP VC++  C++       L++H+   
Sbjct: 126 E-KPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 57.2 bits (139), Expect = 8e-10
 Identities = 43/178 (24%), Positives = 66/178 (37%), Gaps = 38/178 (21%)

Query: 509 CNRCNASFSSMVQLSCH--QIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTL 566
            + C+  F S  QL  H      HG++K+ F+CH  G                       
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKE-FVCHWGG----------------------- 41

Query: 567 PPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLL--CNNTFAQLSTLLNHERIHDN 624
                R FK        +    +HMR H  ++P  C    C  ++++L  L  H R H  
Sbjct: 42  CSRELRPFKA-------QYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG 94

Query: 625 HKPYKCT--KCNYSARVLSNKLAHERIYHQDHV-FKCHINNCIFSTKFYSCLRRHRKI 679
            KPY C    C+ +    S++  H+   H +   + C +  C       S LR+H K 
Sbjct: 95  EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 55.3 bits (134), Expect = 3e-09
 Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 30/176 (17%)

Query: 305 EKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNS 364
           E       C ++F  +  + +H+   H      H     G  +E      C         
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHI-----H-----GERKEF----VCHWGG----- 41

Query: 365 YLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAV--CGDTFKTNYNYFVHMRRHTGFKP 422
              C +          L  H++ H   K P  C    C  ++    N   H+R HTG KP
Sbjct: 42  ---CSRELRPFKAQYMLVVHMRRHTGEK-PHKCTFEGCRKSYSRLENLKTHLRSHTGEKP 97

Query: 423 YQCK--TCNASYASMRVL-QHHEITHSKTLKFPC--INCGKYFTKLEYMIKHMKRH 473
           Y C+   C+ ++++     +H   THS    + C    C K +T    + KH+K  
Sbjct: 98  YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 54.9 bits (133), Expect = 6e-09
 Identities = 39/136 (28%), Positives = 54/136 (39%), Gaps = 18/136 (13%)

Query: 586 NFNIHM---RIHGKDRPFSCLLCNNT-----FAQLSTLLNHERIHDNHKPYKCT--KCNY 635
               H+    IHG+ + F C     +     F     L+ H R H   KP+KCT   C  
Sbjct: 18  QLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRK 77

Query: 636 SARVLSNKLAHERIYHQDHVFKCHINNC--IFSTKFYSCLRRHRKIFHSNESYAPAKCKI 693
           S   L N   H R +  +  + C    C   FS    S   +H+   HSNE   P  CK+
Sbjct: 78  SYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNA--SDRAKHQNRTHSNEK--PYVCKL 133

Query: 694 --CNQSFALFSNLNAH 707
             C + +   S+L  H
Sbjct: 134 PGCTKRYTDPSSLRKH 149

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 54.5 bits (132), Expect = 8e-09
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 20/156 (12%)

Query: 598 RPFSCLLCNNTFAQLSTLLNH---ERIHDNHKPYKCTKCNYSARV-----LSNKLAHERI 649
                  C+  F     L++H   E IH   K + C     S  +         + H R 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 650 YHQDHVFKCHINNC--IFSTKFYSCLRRHRKIFHSNESYAPAKCK--ICNQSFALFSNLN 705
           +  +   KC    C   +S      L+ H +  H+ E   P  C+   C+++F+  S+  
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRL--ENLKTHLRS-HTGEK--PYMCEHEGCSKAFSNASDRA 116

Query: 706 AHYNK-HLKVRRFSCTN--CSLNFTYLSNLIRHRRI 738
            H N+ H   + + C    C+  +T  S+L +H + 
Sbjct: 117 KHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 9/115 (7%)

Query: 717 FSCTNCSLNFTYLSNLIRHRRIKHSQ-HEGKYVCNYCGKSYIDKR-DYTNHVSVHMERKS 774
                CS  F     L+ H   +H      ++VC++ G S   +       + VHM R +
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 775 G---YTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCT--RCNKTFKQNTSFIRH 822
           G   +      C  ++   + L  H+++H  +  Y C    C+K F   +   +H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKH 118

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 35/152 (23%), Positives = 52/152 (34%), Gaps = 22/152 (14%)

Query: 688 PAKCKICNQSFALFSNLNAHYNK---HLKVRRFSCTNCSLN-----FTYLSNLIRHRRIK 739
             +   C+Q F     L  H N    H + + F C     +     F     L+ H R  
Sbjct: 3   DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR- 61

Query: 740 HSQHEGK--YVCNY--CGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTR 795
              H G+  + C +  C KSY    +   H+  H   K  Y      C+  F       +
Sbjct: 62  ---HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP-YMCEHEGCSKAFSNASDRAK 117

Query: 796 HMK-THLIQ--YRCTR--CNKTFKQNTSFIRH 822
           H   TH  +  Y C    C K +   +S  +H
Sbjct: 118 HQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKH 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 86.6 bits (215), Expect = 5e-20
 Identities = 35/180 (19%), Positives = 51/180 (28%), Gaps = 45/180 (25%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLC 195
              I         K C   F+       H  +     P                      
Sbjct: 16  CKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC--------------- 60

Query: 196 DHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKY 255
                    C    K                    +K    L +HIR+ HTGE+PF C +
Sbjct: 61  -----YWEECPREGK-------------------SFKAKYKLVNHIRV-HTGEKPFPCPF 95

Query: 256 --CNYAFKEKHHLETHVNLHLGKTKSFNCNV--CNYSSSLKWNLIQHYRIHTDEKPFNCS 311
             C   F    +L+ H   H G+ K F C    C+   +   +  +H  +HT +K    S
Sbjct: 96  PGCGKIFARSENLKIHKRTHTGE-KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 80.8 bits (200), Expect = 5e-18
 Identities = 35/161 (21%), Positives = 55/161 (34%), Gaps = 20/161 (12%)

Query: 26  CSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRH------TSNKKIY 79
                  +        I           C + F  +  L  H+   H       ++   +
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 80  YKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSF--CAYRGRYRYHFKAHL 137
            +C +  K++K+KYK   H   H  E            +PC F  C        + K H 
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKP----------FPCPFPGCGKIFARSENLKIHK 112

Query: 138 RIHLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDLKPYLC 176
           R H   KP+ C++  C   FA+ S R  H ++HT  K    
Sbjct: 113 RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 38/168 (22%), Positives = 59/168 (35%), Gaps = 30/168 (17%)

Query: 285 CNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVG 344
              S       +    I   +       C++ F     +  H+ + H            G
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV----------GG 52

Query: 345 PEQELNIFRH--CEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAV--C 400
           PEQ  ++     C    KS           FK     +L  HI+ H   K P  C    C
Sbjct: 53  PEQNNHVCYWEECPREGKS-----------FKAK--YKLVNHIRVHTGEK-PFPCPFPGC 98

Query: 401 GDTFKTNYNYFVHMRRHTGFKPYQCKT--CNASYASMRVLQHHEITHS 446
           G  F  + N  +H R HTG KP++C+   C+  +A+    + H   H+
Sbjct: 99  GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 35/188 (18%), Positives = 54/188 (28%), Gaps = 46/188 (24%)

Query: 455 NCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLH---------FTQN 505
           + G     ++  +              + C +T +    L  H+T+              
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 506 KHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRT 565
              C R   SF +  +L  H  R H  +K  F C                    CG    
Sbjct: 62  WEECPREGKSFKAKYKLVNHI-RVHTGEKP-FPCPFP----------------GCG---- 99

Query: 566 LPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLL--CNNTFAQLSTLLNHERIHD 623
                 + F           N  IH R H  ++PF C    C+  FA  S    H  +H 
Sbjct: 100 ------KIFAR-------SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

Query: 624 NHKPYKCT 631
           + K    +
Sbjct: 147 SDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 36/172 (20%), Positives = 58/172 (33%), Gaps = 36/172 (20%)

Query: 484 CSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQ--KQRFMCHR 541
              +    +       +   Q   P   C+ +FS+M +L  H    H     +   +C+ 
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY- 61

Query: 542 CGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFS 601
                            EC       P   + FK        K     H+R+H  ++PF 
Sbjct: 62  ---------------WEEC-------PREGKSFKA-------KYKLVNHIRVHTGEKPFP 92

Query: 602 CLL--CNNTFAQLSTLLNHERIHDNHKPYKCTK--CNYSARVLSNKLAHERI 649
           C    C   FA+   L  H+R H   KP+KC    C+      S++  H  +
Sbjct: 93  CPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 30/154 (19%), Positives = 46/154 (29%), Gaps = 28/154 (18%)

Query: 589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHER 648
               I           C+ TF+ +  L+ H  +     P +                   
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNN----------------- 57

Query: 649 IYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKI--CNQSFALFSNLNA 706
             H  +  +C      F  K    L  H ++ H+ E   P  C    C + FA   NL  
Sbjct: 58  --HVCYWEECPREGKSFKAK--YKLVNHIRV-HTGEK--PFPCPFPGCGKIFARSENLKI 110

Query: 707 HYNKHLKVRRFSCTN--CSLNFTYLSNLIRHRRI 738
           H   H   + F C    C   F   S+  +H  +
Sbjct: 111 HKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 18/154 (11%)

Query: 632 KCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFH------SNES 685
               S + +  +L+ + I            +  FST     L  H  + H      +N  
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTM--HELVTHVTMEHVGGPEQNNHV 59

Query: 686 YAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCT--NCSLNFTYLSNLIRHRRIKHSQH 743
               +C    +SF     L  H   H   + F C    C   F    NL  H+R     H
Sbjct: 60  CYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT----H 115

Query: 744 EGK--YVCNY--CGKSYIDKRDYTNHVSVHMERK 773
            G+  + C +  C + + +  D   H+ VH   K
Sbjct: 116 TGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 15/144 (10%)

Query: 697 SFALFSNLNAHYNK---HLKVRRFSCTNCSLNFTYLSNLIRHRRIKH-------SQHEGK 746
           S +    +    +              +C   F+ +  L+ H  ++H       +     
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 747 YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--Y 804
             C   GKS+  K    NH+ VH   K  +      C   F   + L  H +TH  +  +
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKP-FPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121

Query: 805 RCTR--CNKTFKQNTSFIRHSLKH 826
           +C    C++ F  ++   +H   H
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 16/112 (14%), Positives = 40/112 (35%), Gaps = 12/112 (10%)

Query: 721 NCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVH------MERKS 774
           +   +   +   +  + I   + +       C +++    +   HV++            
Sbjct: 2   SSGSSGQPIKQELSCKWID--EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV 59

Query: 775 GYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTR--CNKTFKQNTSFIRH 822
            Y + C +   +F+ K  L  H++ H  +  + C    C K F ++ +   H
Sbjct: 60  CYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH 111

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 84.1 bits (209), Expect = 1e-19
 Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 229 KPYKQLSNLQSHIRISHTGERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNVCN 286
           K Y +LS+LQ H R  HTGE+P+QC +  C   F     L+ H   H G  K F C  C 
Sbjct: 16  KRYFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV-KPFQCKTCQ 73

Query: 287 YSSSLKWNLIQHYRIHTDEKPFNCSL--CEKQFRQKIHVKNHLRI 329
              S   +L  H R HT EKPF+C    C+K+F +   +  H  +
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 70.2 bits (173), Expect = 9e-15
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 246 TGERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNV--CNYSSSLKWNLIQHYRI 301
           + +RPF C Y  CN  + +  HL+ H   H G+ K + C+   C    S    L +H R 
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGE-KPYQCDFKDCERRFSRSDQLKRHQRR 60

Query: 302 HTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           HT  KPF C  C+++F +  H+K H R 
Sbjct: 61  HTGVKPFQCKTCQRKFSRSDHLKTHTRT 88

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 69.9 bits (172), Expect = 1e-14
 Identities = 40/165 (24%), Positives = 55/165 (33%), Gaps = 56/165 (33%)

Query: 144 KPYACKY--CGNAFAHKSSRDAHQNIHTDLKPYLCLT--CGQSFRTFNLMKRHNLCDHQD 199
           +P+ C Y  C   +   S    H   HT  KPY C    C + F                
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFS--------------- 49

Query: 200 VRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYA 259
                                            +   L+ H R  HTG +PFQCK C   
Sbjct: 50  ---------------------------------RSDQLKRHQRR-HTGVKPFQCKTCQRK 75

Query: 260 FKEKHHLETHVNLHLGKTKSFNCNV--CNYSSSLKWNLIQHYRIH 302
           F    HL+TH   H G+ K F+C    C    +    L++H+ +H
Sbjct: 76  FSRSDHLKTHTRTHTGE-KPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 58.7 bits (143), Expect = 1e-10
 Identities = 37/157 (23%), Positives = 60/157 (38%), Gaps = 47/157 (29%)

Query: 18  ERTYHC--PLCSKQFSKLTTLKRHVGIHMKTQPVRCGY--CGQFFLDLGRLNAHIRQRHT 73
           +R + C  P C+K++ KL+ L+ H   H   +P +C +  C + F    +L  H R RHT
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHT 62

Query: 74  SNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHF 133
             K   ++C  C + +              + +                         H 
Sbjct: 63  GVKP--FQCKTCQRKF--------------SRSD------------------------HL 82

Query: 134 KAHLRIHLNIKPYACKY--CGNAFAHKSSRDAHQNIH 168
           K H R H   KP++C++  C   FA       H N+H
Sbjct: 83  KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 57.1 bits (139), Expect = 4e-10
 Identities = 32/117 (27%), Positives = 42/117 (35%), Gaps = 12/117 (10%)

Query: 80  YKCD--KCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHL 137
           + C    CNK Y      + H   H  E   Y C    +   C     R       K H 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKP-YQC----DFKDCERRFSR---SDQLKRHQ 58

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLT--CGQSFRTFNLMKRH 192
           R H  +KP+ CK C   F+       H   HT  KP+ C    C + F   + + RH
Sbjct: 59  RRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 54.4 bits (132), Expect = 3e-09
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 370 KCGFKTSVLNELKAHIKSHHFPKQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQCKT 427
            C  +   L+ L+ H + H   K P  C    C   F  +     H RRHTG KP+QCKT
Sbjct: 13  GCNKRYFKLSHLQMHSRKHTGEK-PYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT 71

Query: 428 CNASYASMRVLQHHEITHS--KTLKFPCINCGKYFTKLEYMIKHMKRH 473
           C   ++    L+ H  TH+  K       +C K F + + +++H   H
Sbjct: 72  CQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 586 NFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK--CNYSARVLSNK 643
               H R H   +PF C  C   F++   L  H R H   KP+ C    C          
Sbjct: 53  QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDEL 112

Query: 644 LAHERI 649
           + H  +
Sbjct: 113 VRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 48.3 bits (116), Expect = 5e-07
 Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 11/119 (9%)

Query: 688 PAKCK--ICNQSFALFSNLNAHYNKHLKVRRFSCTN--CSLNFTYLSNLIRHRRIKHSQH 743
           P  C    CN+ +   S+L  H  KH   + + C    C   F+    L RH+R     H
Sbjct: 6   PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR----H 61

Query: 744 EGK--YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTH 800
            G   + C  C + +        H   H   K  ++ R   C   F     L RH   H
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP-FSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 47.9 bits (115), Expect = 7e-07
 Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 626 KPYKCT--KCNYSARVLSNKLAHERIYHQDHVFKCHINNC--IFSTKFYSCLRRHRKIFH 681
           +P+ C    CN     LS+   H R +  +  ++C   +C   FS      L+RH++  H
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRS--DQLKRHQRR-H 61

Query: 682 SNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSC--TNCSLNFTYLSNLIRHRRI 738
           +     P +CK C + F+   +L  H   H   + FSC   +C   F     L+RH  +
Sbjct: 62  TGVK--PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 17/122 (13%)

Query: 656 FKCHINNC--IFSTKFYSCLRRHRKIFHSNESYAPAKCKI--CNQSFALFSNLNAHYNKH 711
           F C    C   +     S L+ H +  H+ E   P +C    C + F+    L  H  +H
Sbjct: 7   FMCAYPGCNKRYFKL--SHLQMHSRK-HTGEK--PYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 712 LKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGK--YVCNY--CGKSYIDKRDYTNHVS 767
             V+ F C  C   F+   +L  H R     H G+  + C +  C K +    +   H +
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRT----HTGEKPFSCRWPSCQKKFARSDELVRHHN 117

Query: 768 VH 769
           +H
Sbjct: 118 MH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 13/122 (10%)

Query: 418 TGFKPYQCK--TCNASYASMRVLQHHEITHS--KTLKFPCINCGKYFTKLEYMIKHMKRH 473
           +  +P+ C    CN  Y  +  LQ H   H+  K  +    +C + F++ + + +H +RH
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 474 FNTN-KP-VCEICSQTMAHNQVLQRHMTLHFTQNK-HPCNR--CNASFSSMVQLSCHQIR 528
             T  KP  C+ C +  + +  L+ H   H T  K   C    C   F+   +L  H   
Sbjct: 62  --TGVKPFQCKTCQRKFSRSDHLKTHTRTH-TGEKPFSCRWPSCQKKFARSDELVRHH-N 117

Query: 529 AH 530
            H
Sbjct: 118 MH 119

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 83.2 bits (207), Expect = 1e-19
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S     P +C+ C   F  K  L+TH+  H G  K + C  C+Y+++   +L +H RIH+
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGV-KPYKCKTCDYAAADSSSLNKHLRIHS 60

Query: 304 DEKPFNCSLCEKQFRQKIHVKNHLRI 329
           DE+PF C +C    R    +  HLR 
Sbjct: 61  DERPFKCQICPYASRNSSQLTVHLRS 86

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 78.2 bits (194), Expect = 7e-18
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 229 KPYK---------QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKS 279
            P+K         +   L++H+R  HTG +P++CK C+YA  +   L  H+ +H  + + 
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE-RP 64

Query: 280 FNCNVCNYSSSLKWNLIQHYRIHTDEKPFNC 310
           F C +C Y+S     L  H R HT +   + 
Sbjct: 65  FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 66.7 bits (164), Expect = 8e-14
 Identities = 31/136 (22%), Positives = 42/136 (30%), Gaps = 49/136 (36%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCL 177
           + C  C      +   K H+R H  +KPY CK C  A A  SS + H  IH+D +P+ C 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 178 TCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNL 237
            C  + R                                                  S L
Sbjct: 69  ICPYASR------------------------------------------------NSSQL 80

Query: 238 QSHIRISHTGERPFQC 253
             H+R  HTG+     
Sbjct: 81  TVHLRS-HTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 56.3 bits (137), Expect = 4e-10
 Identities = 24/66 (36%), Positives = 33/66 (50%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNK 643
           K     HMR H   +P+ C  C+   A  S+L  H RIH + +P+KC  C Y++R  S  
Sbjct: 21  KDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQL 80

Query: 644 LAHERI 649
             H R 
Sbjct: 81  TVHLRS 86

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 55.1 bits (134), Expect = 1e-09
 Identities = 28/77 (36%), Positives = 34/77 (44%)

Query: 397 CAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINC 456
           C VCG  F        HMR HTG KPY+CKTC+ + A    L  H   HS    F C  C
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70

Query: 457 GKYFTKLEYMIKHMKRH 473
                    +  H++ H
Sbjct: 71  PYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 49.7 bits (120), Expect = 9e-08
 Identities = 33/118 (27%), Positives = 42/118 (35%), Gaps = 33/118 (27%)

Query: 594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQD 653
            G   P  C +C   F++   L  H R H   KPYKC  C+Y+A   S+   H RI    
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI---- 58

Query: 654 HVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKH 711
                                      HS+E   P KC+IC  +    S L  H   H
Sbjct: 59  ---------------------------HSDER--PFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 49.0 bits (118), Expect = 1e-07
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC 630
            ++ N H+RIH  +RPF C +C       S L  H R H        
Sbjct: 49  SSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 48.2 bits (116), Expect = 3e-07
 Identities = 26/131 (19%), Positives = 40/131 (30%), Gaps = 45/131 (34%)

Query: 302 HTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRH------- 354
                P  C +C K F +K  +K H+R                         H       
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRC------------------------HTGVKPYK 38

Query: 355 CEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHM 414
           C+ CD +              S  + L  H++ H   + P  C +C    + +    VH+
Sbjct: 39  CKTCDYA-----------AADS--SSLNKHLRIHSDER-PFKCQICPYASRNSSQLTVHL 84

Query: 415 RRHTGFKPYQC 425
           R HTG      
Sbjct: 85  RSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 47.0 bits (113), Expect = 7e-07
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
              + C +C K FS+   LK H+  H   +P +C  C     D   LN H+R  H+  + 
Sbjct: 6   SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDERP 64

Query: 78  IYYKCDKCNKTYKSKYKFERHKNTH 102
             +KC  C    ++  +   H  +H
Sbjct: 65  --FKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 45.9 bits (110), Expect = 2e-06
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 688 PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGK- 746
           P KC++C + F+    L  H   H  V+ + C  C       S+L +H RI    H  + 
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI----HSDER 63

Query: 747 -YVCNYCGKSYIDKRDYTNHVSVH 769
            + C  C  +  +    T H+  H
Sbjct: 64  PFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.0 bits (105), Expect = 9e-06
 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 9/84 (10%)

Query: 719 CTNCSLNFTYLSNLIRHRRIKHSQHEGK--YVCNYCGKSYIDKRDYTNHVSVHMERKSGY 776
           C  C   F+    L  H R     H G   Y C  C  +  D      H+ +H + +  +
Sbjct: 11  CEVCGKCFSRKDKLKTHMRC----HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP-F 65

Query: 777 TQRCHKCNATFRIKKFLTRHMKTH 800
             +C  C    R    LT H+++H
Sbjct: 66  --KCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 43.6 bits (104), Expect = 1e-05
 Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 417 HTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNT 476
                P++C+ C   ++    L+ H   H+    + C  C         + KH++ H  +
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH--S 60

Query: 477 N-KP-VCEICSQTMAHNQVLQRHMTLH 501
           + +P  C+IC     ++  L  H+  H
Sbjct: 61  DERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.0 bits (100), Expect = 5e-05
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 747 YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--Y 804
           + C  CGK +  K     H+  H   K  Y  +C  C+        L +H++ H  +  +
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKP-Y--KCKTCDYAAADSSSLNKHLRIHSDERPF 65

Query: 805 RCTRCNKTFKQNTSFIRH 822
           +C  C    + ++    H
Sbjct: 66  KCQICPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 41.3 bits (98), Expect = 9e-05
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 671 SCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLS 730
             L+ H +  H+     P KCK C+ + A  S+LN H   H   R F C  C       S
Sbjct: 22  DKLKTHMRC-HTGVK--PYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSS 78

Query: 731 NLIRHRRI 738
            L  H R 
Sbjct: 79  QLTVHLRS 86

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 81.0 bits (201), Expect = 1e-18
 Identities = 33/185 (17%), Positives = 53/185 (28%), Gaps = 81/185 (43%)

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
                 K Y C+ CG +F HKS RD H ++H  L+PY C  CG+ F+             
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFK------------- 48

Query: 198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCN 257
                                                 +L  H++I HTG +P++C  C 
Sbjct: 49  -----------------------------------MKHHLVGHMKI-HTGIKPYECNICA 72

Query: 258 YAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQF 317
             F  +                                  H  + +  K +  +  E+  
Sbjct: 73  KRFMWRDSF-------------------------------HRHVTSCTKSYEAAKAEQNT 101

Query: 318 RQKIH 322
            +   
Sbjct: 102 TEASG 106

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 68.6 bits (169), Expect = 3e-14
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
             +G++ + C+ C  +F  K   + H+++HLG  + + C VC     +K +L+ H +IHT
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGL-RPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 304 DEKPFNCSLCEKQFRQKIHVKNHLRI 329
             KP+ C++C K+F  +     H  +
Sbjct: 62  GIKPYECNICAKRFMWRDSF--HRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 67.5 bits (166), Expect = 8e-14
 Identities = 22/139 (15%), Positives = 36/139 (25%), Gaps = 51/139 (36%)

Query: 128 RYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFN 187
            ++     H+ +HL ++PY C  CG  F  K     H  IHT +KPY C  C + F    
Sbjct: 20  THKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM--- 76

Query: 188 LMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTG 247
                                                           +   H+    + 
Sbjct: 77  ---------------------------------------------WRDSFHRHV---TSC 88

Query: 248 ERPFQCKYCNYAFKEKHHL 266
            + ++         E    
Sbjct: 89  TKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 55.1 bits (134), Expect = 1e-09
 Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 45/132 (34%)

Query: 54  CGQFFLDLGRLNAHIRQR-HTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCI 112
           CG+ F    + + H     H   +   Y C  C K +                       
Sbjct: 15  CGKSFTHKSQRDRH--MSMHLGLRP--YGCGVCGKKF----------------------- 47

Query: 113 YCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLK 172
                          + ++H   H++IH  IKPY C  C   F  + S   H+++ +  K
Sbjct: 48  ---------------KMKHHLVGHMKIHTGIKPYECNICAKRFMWRDS--FHRHVTSCTK 90

Query: 173 PYLCLTCGQSFR 184
            Y      Q+  
Sbjct: 91  SYEAAKAEQNTT 102

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 52.4 bits (127), Expect = 1e-08
 Identities = 18/50 (36%), Positives = 26/50 (52%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC 633
           K+  + HM +H   RP+ C +C   F     L+ H +IH   KPY+C  C
Sbjct: 22  KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNIC 71

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 49.4 bits (119), Expect = 2e-07
 Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 12/118 (10%)

Query: 591 MRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIY 650
                 D+ + C  C  +F   S    H  +H   +PY C  C    ++  + + H +I+
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 651 HQDHVFKCHINNC--IFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNA 706
                ++C  N C   F  +       HR +  S       +     Q+    S  ++
Sbjct: 61  TGIKPYEC--NICAKRFMWR--DSF--HRHV-TSCTK--SYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 45.5 bits (109), Expect = 4e-06
 Identities = 19/71 (26%), Positives = 27/71 (38%)

Query: 400 CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKY 459
           CG +F        HM  H G +PY C  C   +     L  H   H+    + C  C K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74

Query: 460 FTKLEYMIKHM 470
           F   +   +H+
Sbjct: 75  FMWRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 45.1 bits (108), Expect = 5e-06
 Identities = 29/144 (20%), Positives = 44/144 (30%), Gaps = 46/144 (31%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQR-HTSNK 76
           ++ Y C  C K F+  +   RH+ +H+  +P  CG CG+ F     L  H   + HT  K
Sbjct: 8   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH--MKIHTGIK 64

Query: 77  KIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAH 136
              Y+C+ C K +                                       +R  F  H
Sbjct: 65  P--YECNICAKRF--------------------------------------MWRDSF--H 82

Query: 137 LRIHLNIKPYACKYCGNAFAHKSS 160
             +    K Y            S 
Sbjct: 83  RHVTSCTKSYEAAKAEQNTTEASG 106

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 44.0 bits (105), Expect = 1e-05
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 394 PSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPC 453
           P  C VCG  FK  ++   HM+ HTG KPY+C  C   +        H    S T  +  
Sbjct: 37  PYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH--VTSCTKSYEA 94

Query: 454 INCGKYFT 461
               +  T
Sbjct: 95  AKAEQNTT 102

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 42.4 bits (101), Expect = 5e-05
 Identities = 26/136 (19%), Positives = 37/136 (27%), Gaps = 48/136 (35%)

Query: 300 RIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRH----- 354
              + +K + C  C K F  K     H+ +                        H     
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSM------------------------HLGLRP 37

Query: 355 --CEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFV 412
             C VC K            FK    + L  H+K H   K P  C +C   F   +    
Sbjct: 38  YGCGVCGKK-----------FKMK--HHLVGHMKIHTGIK-PYECNICAKRF--MWRDSF 81

Query: 413 HMRRHTGFKPYQCKTC 428
           H    +  K Y+    
Sbjct: 82  HRHVTSCTKSYEAAKA 97

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 41.3 bits (98), Expect = 1e-04
 Identities = 26/133 (19%), Positives = 42/133 (31%), Gaps = 38/133 (28%)

Query: 688 PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGK- 746
              C+ C +SF   S  + H + HL +R + C  C   F    +L+ H +I    H G  
Sbjct: 10  LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI----HTGIK 64

Query: 747 -YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQYR 805
            Y CN C K                                F  +    RH+ +    Y 
Sbjct: 65  PYECNICAK-------------------------------RFMWRDSFHRHVTSCTKSYE 93

Query: 806 CTRCNKTFKQNTS 818
             +  +   + + 
Sbjct: 94  AAKAEQNTTEASG 106

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.3 bits (93), Expect = 5e-04
 Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 7/113 (6%)

Query: 414 MRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRH 473
               +G K Y C+ C  S+        H   H     + C  CGK F    +++ HMK H
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 474 FNTN-KP-VCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSC 524
             T  KP  C IC++         RH+        +   +   + +     S 
Sbjct: 61  --TGIKPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.0 bits (92), Expect = 7e-04
 Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 8/87 (9%)

Query: 740 HSQHEGK--YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHM 797
            S   G   Y C  CGKS+  K     H+S+H+  +  Y   C  C   F++K  L  HM
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP-YG--CGVCGKKFKMKHHLVGHM 57

Query: 798 KTHLIQ--YRCTRCNKTFKQNTSFIRH 822
           K H     Y C  C K F    SF RH
Sbjct: 58  KIHTGIKPYECNICAKRFMWRDSFHRH 84

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 80.6 bits (200), Expect = 2e-18
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 2/95 (2%)

Query: 235 SNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWN 294
           S            ++ F CK+C   F + ++L  H   H  + + + C++C+ +   + +
Sbjct: 3   SGSSGGRLP-SKTKKEFICKFCGRHFTKSYNLLIHERTHTDE-RPYTCDICHKAFRRQDH 60

Query: 295 LIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           L  H  IH+ EKPF C  C K F Q   +  H  +
Sbjct: 61  LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 80.2 bits (199), Expect = 2e-18
 Identities = 30/180 (16%), Positives = 46/180 (25%), Gaps = 78/180 (43%)

Query: 132 HFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKR 191
                       K + CK+CG  F    +   H+  HTD +PY C  C ++FR       
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFR------- 56

Query: 192 HNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPF 251
                                                    +  +L+ H  I H+ E+PF
Sbjct: 57  -----------------------------------------RQDHLRDHRYI-HSKEKPF 74

Query: 252 QCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCS 311
           +C+ C   F                           S      L  H  +H        +
Sbjct: 75  KCQECGKGF-------------------------CQSR----TLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 55.1 bits (134), Expect = 1e-09
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 9/110 (8%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNK 643
            +  +         + F C  C   F +   LL HER H + +PY C  C+ + R   + 
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 644 LAHERIYHQDHVFKCHINNC--IFSTKFYSCLRRHRKIFHSNESYAPAKC 691
             H  I+ ++  FKC    C   F       L  H+ + H   S      
Sbjct: 62  RDHRYIHSKEKPFKC--QECGKGFCQS--RTLAVHKTL-HMQTS--SPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 54.7 bits (133), Expect = 2e-09
 Identities = 27/143 (18%), Positives = 41/143 (28%), Gaps = 43/143 (30%)

Query: 35  TLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQR-HTSNKKIYYKCDKCNKTYKSKY 93
                       +   C +CG+ F     L  H  +R HT  +   Y CD C+K +    
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH--ERTHTDERP--YTCDICHKAF---- 55

Query: 94  KFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGN 153
                                             R + H + H  IH   KP+ C+ CG 
Sbjct: 56  ----------------------------------RRQDHLRDHRYIHSKEKPFKCQECGK 81

Query: 154 AFAHKSSRDAHQNIHTDLKPYLC 176
            F    +   H+ +H        
Sbjct: 82  GFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 54.0 bits (131), Expect = 4e-09
 Identities = 24/139 (17%), Positives = 36/139 (25%), Gaps = 45/139 (32%)

Query: 294 NLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFR 353
                      +K F C  C + F +  ++  H R                         
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERT------------------------ 39

Query: 354 H-------CEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKT 406
           H       C++C K+           F+    + L+ H   H   K P  C  CG  F  
Sbjct: 40  HTDERPYTCDICHKA-----------FRRQ--DHLRDHRYIHSKEK-PFKCQECGKGFCQ 85

Query: 407 NYNYFVHMRRHTGFKPYQC 425
           +    VH   H        
Sbjct: 86  SRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 52.4 bits (127), Expect = 1e-08
 Identities = 28/80 (35%), Positives = 37/80 (46%)

Query: 394 PSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPC 453
             IC  CG  F  +YN  +H R HT  +PY C  C+ ++     L+ H   HSK   F C
Sbjct: 17  EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC 76

Query: 454 INCGKYFTKLEYMIKHMKRH 473
             CGK F +   +  H   H
Sbjct: 77  QECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 52.1 bits (126), Expect = 2e-08
 Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 15/117 (12%)

Query: 671 SCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLS 730
           S     R      +      CK C + F    NL  H   H   R ++C  C   F    
Sbjct: 3   SGSSGGRLP-SKTKK--EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD 59

Query: 731 NLIRHRRIKHSQHEGK--YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNA 785
           +L  HR I    H  +  + C  CGK +   R    H ++HM+  S          +
Sbjct: 60  HLRDHRYI----HSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSS------PTAAS 106

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 49.4 bits (119), Expect = 2e-07
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 11/97 (11%)

Query: 730 SNLIRHRRIKHSQHEGK--YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATF 787
           S     R       + K  ++C +CG+ +    +   H   H + +  YT  C  C+  F
Sbjct: 3   SGSSGGRLP----SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERP-YT--CDICHKAF 55

Query: 788 RIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRH 822
           R +  L  H   H  +  ++C  C K F Q+ +   H
Sbjct: 56  RRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 48.6 bits (117), Expect = 3e-07
 Identities = 14/48 (29%), Positives = 20/48 (41%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
           + +   H  IH K++PF C  C   F Q  TL  H+ +H         
Sbjct: 58  QDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 45.5 bits (109), Expect = 3e-06
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 412 VHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMK 471
                    K + CK C   +     L  HE TH+    + C  C K F + +++  H  
Sbjct: 7   GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY 66

Query: 472 RHFNTNKP-VCEICSQTMAHNQVLQRHMTLH 501
            H +  KP  C+ C +    ++ L  H TLH
Sbjct: 67  IH-SKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 76.8 bits (190), Expect = 5e-17
 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 7/105 (6%)

Query: 229 KPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNV--CN 286
           K ++  S ++ H+   H G R   C  C  AF E   L+ H  +H G+ K F C    C 
Sbjct: 15  KMFRDNSAMRKHLHT-H-GPRVHVCAECGKAFVESSKLKRHQLVHTGE-KPFQCTFEGCG 71

Query: 287 YSSSLKWNLIQHYRIHTDEKPFNCSL--CEKQFRQKIHVKNHLRI 329
              SL +NL  H RIHT ++P+ C    C K+F Q  ++K+H+  
Sbjct: 72  KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 71.8 bits (177), Expect = 3e-15
 Identities = 41/185 (22%), Positives = 54/185 (29%), Gaps = 83/185 (44%)

Query: 128 RYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLT--CGQSFRT 185
           R     + HL  H   + + C  CG AF   S    HQ +HT  KP+ C    CG+ F  
Sbjct: 18  RDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS- 75

Query: 186 FNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISH 245
                                                             NL++H+RI H
Sbjct: 76  -----------------------------------------------LDFNLRTHVRI-H 87

Query: 246 TGERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           TG+RP+ C +  CN                    K F       S+    NL  H   H 
Sbjct: 88  TGDRPYVCPFDGCN--------------------KKFAQ-----ST----NLKSHILTHA 118

Query: 304 DEKPF 308
             K  
Sbjct: 119 KAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 61.0 bits (149), Expect = 2e-11
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 248 ERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDE 305
            R   C +  C   F++   +  H++ H G  +   C  C  +      L +H  +HT E
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GP-RVHVCAECGKAFVESSKLKRHQLVHTGE 60

Query: 306 KPFNCSL--CEKQFRQKIHVKNHLRI 329
           KPF C+   C K+F    +++ H+RI
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRI 86

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 58.7 bits (143), Expect = 1e-10
 Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 48/164 (29%)

Query: 17  DERTYHCPL--CSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTS 74
           + RT  CP   C+K F   + +++H+  H   +   C  CG+ F++  +L  H    HT 
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQL-VHTG 59

Query: 75  NKKIYYKC--DKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYH 132
            K   ++C  + C K +                                         ++
Sbjct: 60  EKP--FQCTFEGCGKRF--------------------------------------SLDFN 79

Query: 133 FKAHLRIHLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDLKPY 174
            + H+RIH   +PY C +  C   FA  ++  +H   H   K  
Sbjct: 80  LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 586 NFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK--CNYSARVLSNK 643
               H+  HG  R   C  C   F + S L  H+ +H   KP++CT   C     +  N 
Sbjct: 22  AMRKHLHTHG-PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL 80

Query: 644 LAHERIYHQDHVFKCHINNC--IFSTKFYSCLRRHRKI 679
             H RI+  D  + C  + C   F+    + L+ H   
Sbjct: 81  RTHVRIHTGDRPYVCPFDGCNKKFAQS--TNLKSHILT 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 49.8 bits (120), Expect = 1e-07
 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 12/117 (10%)

Query: 717 FSCTN--CSLNFTYLSNLIRHRRIKHSQH-EGKYVCNYCGKSYIDKRDYTNHVSVHMERK 773
            +C +  C+  F   S + +H       H    +VC  CGK++++      H  VH   K
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHT----HGPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61

Query: 774 SGYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTR--CNKTFKQNTSFIRHSLKH 826
             +      C   F +   L  H++ H     Y C    CNK F Q+T+   H L H
Sbjct: 62  P-FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 49.8 bits (120), Expect = 1e-07
 Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 38/151 (25%)

Query: 481 CEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCH 540
            + C++    N  +++H+  H     H C  C  +F    +L  HQ   H  +K      
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEK----PF 63

Query: 541 RCGIINLKRKYHVYHLKYECGYTRTLPPELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPF 600
           +C                 CG          ++F  D        N   H+RIH  DRP+
Sbjct: 64  QC-------------TFEGCG----------KRFSLD-------FNLRTHVRIHTGDRPY 93

Query: 601 SCLL--CNNTFAQLSTLLNHERIHDNHKPYK 629
            C    CN  FAQ + L +H   H   K  +
Sbjct: 94  VCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 48.7 bits (117), Expect = 4e-07
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 394 PSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKT--CNASYASMRVLQHHEITHS--KTL 449
             +CA CG  F  +     H   HTG KP+QC    C   ++    L+ H   H+  +  
Sbjct: 34  VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY 93

Query: 450 KFPCINCGKYFTKLEYMIKHMKRH 473
             P   C K F +   +  H+  H
Sbjct: 94  VCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 46.7 bits (112), Expect = 2e-06
 Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 688 PAKC--KICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEG 745
              C  K C + F   S +  H + H   R   C  C   F   S L RH+ +    H G
Sbjct: 5   TIACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLV----HTG 59

Query: 746 K--YVCNY--CGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTH 800
           +  + C +  CGK +    +   HV +H   +  Y      CN  F     L  H+ TH
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP-YVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 45.6 bits (109), Expect = 5e-06
 Identities = 39/154 (25%), Positives = 53/154 (34%), Gaps = 50/154 (32%)

Query: 304 DEKPFNCSL--CEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRH------C 355
           + +   C    C K FR    ++ HL                          H      C
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHT------------------------HGPRVHVC 37

Query: 356 EVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAV--CGDTFKTNYNYFVH 413
             C K+           F  S  ++LK H   H   K P  C    CG  F  ++N   H
Sbjct: 38  AECGKA-----------FVES--SKLKRHQLVHTGEK-PFQCTFEGCGKRFSLDFNLRTH 83

Query: 414 MRRHTGFKPYQCKT--CNASYASMRVLQHHEITH 445
           +R HTG +PY C    CN  +A    L+ H +TH
Sbjct: 84  VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.4 bits (106), Expect = 1e-05
 Identities = 28/155 (18%), Positives = 47/155 (30%), Gaps = 42/155 (27%)

Query: 278 KSFNC--NVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNF 335
           ++  C    C         + +H   H   +   C+ C K F +   +K H  +      
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTHG-PRVHVCAECGKAFVESSKLKRHQLV------ 56

Query: 336 CDH----CFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFP 391
             H     F+             C               CG + S+   L+ H++ H   
Sbjct: 57  --HTGEKPFQ-------------CTFEG-----------CGKRFSLDFNLRTHVRIHTGD 90

Query: 392 KQPSICAV--CGDTFKTNYNYFVHMRRHTGFKPYQ 424
           + P +C    C   F  + N   H+  H   K  Q
Sbjct: 91  R-PYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 42.1 bits (100), Expect = 8e-05
 Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 16/121 (13%)

Query: 626 KPYKCTK--CNYSARVLSNKLAHERIYHQDHVFKCHINNC--IFSTKFYSCLRRHRKIFH 681
           +   C    C    R  S    H    H   V  C    C   F     S L+RH+ + H
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHT-HGPRVHVC--AECGKAFVES--SKLKRHQLV-H 57

Query: 682 SNESYAPAKCKI--CNQSFALFSNLNAHYNKHLKVRRFSC--TNCSLNFTYLSNLIRHRR 737
           + E   P +C    C + F+L  NL  H   H   R + C    C+  F   +NL  H  
Sbjct: 58  TGEK--PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115

Query: 738 I 738
            
Sbjct: 116 T 116

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 75.3 bits (186), Expect = 7e-17
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 4/85 (4%)

Query: 236 NLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLG---KTKSFNCNVCNYSSSLK 292
           +  S  R  HTGE+P+ C +C+  F++K  L+ H   +        +F C+ C  + + +
Sbjct: 2   SSGSSGRT-HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60

Query: 293 WNLIQHYRIHTDEKPFNCSLCEKQF 317
             + +H                   
Sbjct: 61  NTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 66.0 bits (162), Expect = 1e-13
 Identities = 19/133 (14%), Positives = 32/133 (24%), Gaps = 53/133 (39%)

Query: 132 HFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTD----LKPYLCLTCGQSFRTFN 187
              +  R H   KPYAC +C   F  K   D H   + D       ++C  CG++F    
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFT--- 58

Query: 188 LMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTG 247
                                                        + + +  H      G
Sbjct: 59  ---------------------------------------------RRNTMARHADN-CAG 72

Query: 248 ERPFQCKYCNYAF 260
               + +    + 
Sbjct: 73  PDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 60.2 bits (147), Expect = 1e-11
 Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 4/70 (5%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIH----LNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKP 173
           Y CS C    R +     H + +         + C  CG  F  +++   H +       
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75

Query: 174 YLCLTCGQSF 183
                 G S 
Sbjct: 76  VEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 53.3 bits (129), Expect = 4e-09
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 586 NFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIH----DNHKPYKCTKCNYSARVLS 641
           +     R H  ++P++C  C+ TF Q   L  H + +         + C+KC  +    +
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 642 NKLAHERI 649
               H   
Sbjct: 62  TMARHADN 69

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.9 bits (128), Expect = 6e-09
 Identities = 26/135 (19%), Positives = 34/135 (25%), Gaps = 55/135 (40%)

Query: 294 NLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFR 353
           +     R HT EKP+ CS C+K FRQK  +  H +  H+ NF    F             
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFV------------ 49

Query: 354 HCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVH 413
            C  C K                                          TF        H
Sbjct: 50  -CSKCGK------------------------------------------TFTRRNTMARH 66

Query: 414 MRRHTGFKPYQCKTC 428
                G    + +  
Sbjct: 67  ADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 50.6 bits (122), Expect = 3e-08
 Identities = 9/54 (16%), Positives = 17/54 (31%), Gaps = 4/54 (7%)

Query: 584 KTNFNIHMRIH----GKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC 633
           K   ++H + +         F C  C  TF + +T+  H          +    
Sbjct: 28  KQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 47.9 bits (115), Expect = 3e-07
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 412 VHMRRHTGFKPYQCKTCNASYASMRVLQHHEITH---SKTLK-FPCINCGKYFTKLEYMI 467
              R HTG KPY C  C+ ++   ++L  H   +   +     F C  CGK FT+   M 
Sbjct: 5   SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMA 64

Query: 468 KHMKRH 473
           +H    
Sbjct: 65  RHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 45.2 bits (108), Expect = 2e-06
 Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 4/71 (5%)

Query: 394 PSICAVCGDTFKTNYNYFVHMRRHTG----FKPYQCKTCNASYASMRVLQHHEITHSKTL 449
           P  C+ C  TF+      +H +R+         + C  C  ++     +  H    +   
Sbjct: 15  PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD 74

Query: 450 KFPCINCGKYF 460
                N G   
Sbjct: 75  GVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 44.1 bits (105), Expect = 7e-06
 Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 9/88 (10%)

Query: 731 NLIRHRRIKHSQHEGK--YVCNYCGKSYIDKRDYTNHVSVHM-ERKSGYTQRCHKCNATF 787
           +     R     H G+  Y C++C K++  K+    H   +           C KC  TF
Sbjct: 2   SSGSSGRT----HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTF 57

Query: 788 RIKKFLTRHMKTHLIQ--YRCTRCNKTF 813
             +  + RH                 + 
Sbjct: 58  TRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 43.7 bits (104), Expect = 8e-06
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 13/90 (14%)

Query: 673 LRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKH----LKVRRFSCTNCSLNFTY 728
                +  H+ E   P  C  C+++F     L+ H+ ++         F C+ C   FT 
Sbjct: 3   SGSSGRT-HTGEK--PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTR 59

Query: 729 LSNLIRHRRIKHSQHEGK--YVCNYCGKSY 756
            + + RH         G         G S 
Sbjct: 60  RNTMARHADN----CAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 38.3 bits (90), Expect = 8e-04
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 780 CHKCNATFRIKKFLTRHMKTH------LIQYRCTRCNKTFKQNTSFIRH 822
           C  C+ TFR K+ L  H K +         + C++C KTF +  +  RH
Sbjct: 18  CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 70.2 bits (173), Expect = 4e-15
 Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 41/112 (36%)

Query: 229 KPYK-----------QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKT 277
           +PY            Q  +L  HIRI HTG++PFQC+ C   F    HL           
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHL----------- 50

Query: 278 KSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                               H R HT EKPF C +C ++F +    K H +I
Sbjct: 51  ------------------TTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 65.6 bits (161), Expect = 2e-13
 Identities = 32/134 (23%), Positives = 43/134 (32%), Gaps = 51/134 (38%)

Query: 144 KPYACKY--CGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVR 201
           +PYAC    C   F+   S   H  IHT  KP+ C  C ++F                  
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFS----------------- 45

Query: 202 NYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFK 261
                                          +  +L +HIR  HTGE+PF C  C   F 
Sbjct: 46  -------------------------------RSDHLTTHIRT-HTGEKPFACDICGRKFA 73

Query: 262 EKHHLETHVNLHLG 275
                + H  +HL 
Sbjct: 74  RSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 58.2 bits (142), Expect = 8e-11
 Identities = 19/64 (29%), Positives = 28/64 (43%)

Query: 586 NFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLA 645
           +   H+RIH   +PF C +C   F++   L  H R H   KP+ C  C         +  
Sbjct: 21  SLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR 80

Query: 646 HERI 649
           H +I
Sbjct: 81  HTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 57.5 bits (140), Expect = 1e-10
 Identities = 21/61 (34%), Positives = 28/61 (45%)

Query: 132 HFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKR 191
               H+RIH   KP+ C+ C   F+       H   HT  KP+ C  CG+ F   +  KR
Sbjct: 21  SLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR 80

Query: 192 H 192
           H
Sbjct: 81  H 81

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.0 bits (131), Expect = 2e-09
 Identities = 24/74 (32%), Positives = 37/74 (50%)

Query: 400 CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKY 459
           C   F  + +   H+R HTG KP+QC+ C  +++    L  H  TH+    F C  CG+ 
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 460 FTKLEYMIKHMKRH 473
           F + +   +H K H
Sbjct: 72  FARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 53.6 bits (130), Expect = 3e-09
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 18  ERTYHCPL--CSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSN 75
           ER Y CP+  C ++FS+  +L RH+ IH   +P +C  C + F     L  HIR  HT  
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGE 60

Query: 76  KKIYYKCDKCNKTYKSKYKFERHKNTH 102
           K   + CD C + +    + +RH   H
Sbjct: 61  KP--FACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.9 bits (110), Expect = 2e-06
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 656 FKCHINNC--IFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLK 713
           + C + +C   FS      L RH +I H+ +   P +C+IC ++F+   +L  H   H  
Sbjct: 5   YACPVESCDRRFSQS--GSLTRHIRI-HTGQK--PFQCRICMRNFSRSDHLTTHIRTHTG 59

Query: 714 VRRFSCTNCSLNFTYLSNLIRHRRI 738
            + F+C  C   F       RH +I
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 44.8 bits (107), Expect = 4e-06
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 371 CGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNA 430
           C  + S    L  HI+ H   K P  C +C   F  + +   H+R HTG KP+ C  C  
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQK-PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

Query: 431 SYASMRVLQHHEITH 445
            +A     + H   H
Sbjct: 71  KFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 41.7 bits (99), Expect = 5e-05
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 586 NFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIH 622
           +   H+R H  ++PF+C +C   FA+      H +IH
Sbjct: 49  HLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 41.7 bits (99), Expect = 5e-05
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 9/83 (10%)

Query: 720 TNCSLNFTYLSNLIRHRRIKHSQHEGK--YVCNYCGKSYIDKRDYTNHVSVHMERKSGYT 777
            +C   F+   +L RH RI    H G+  + C  C +++      T H+  H   K  + 
Sbjct: 10  ESCDRRFSQSGSLTRHIRI----HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FA 64

Query: 778 QRCHKCNATFRIKKFLTRHMKTH 800
             C  C   F       RH K H
Sbjct: 65  --CDICGRKFARSDERKRHTKIH 85

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 67.1 bits (165), Expect = 4e-14
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S +   P +C  C+Y+   K  L  H  +H    + F CN C++ +    NL +H +   
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTD-RPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 304 DEKPFNCS 311
            +     S
Sbjct: 62  GDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 14/57 (24%), Positives = 20/57 (35%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPY 174
             CS C+Y    +   + H RIH   +P+ C YC       S+   H          
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG 66

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 52.9 bits (128), Expect = 4e-09
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 592 RIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERI 649
                  P  C  C+ + +  + L  HERIH   +P+KC  C++  +  SN   H + 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 10/56 (17%)

Query: 229 KPYK---------QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLG 275
            P K           + L+ H RI H  +RPF+C YC++  K+  +L  H+    G
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERI-HCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 5/61 (8%)

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDH 197
               +  P  C  C  + + K++   H+ IH   +P+ C  C    +     +  NL  H
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTK-----QPSNLSKH 56

Query: 198 Q 198
            
Sbjct: 57  M 57

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.4 bits (106), Expect = 4e-06
 Identities = 16/48 (33%), Positives = 19/48 (39%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
           K    IH RIH  DRPF C  C+    Q S L  H +          +
Sbjct: 22  KAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 43.6 bits (104), Expect = 7e-06
 Identities = 11/52 (21%), Positives = 19/52 (36%)

Query: 394 PSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITH 445
           P  C+ C  +  +     +H R H   +P++C  C+        L  H    
Sbjct: 9   PEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 41.3 bits (98), Expect = 5e-05
 Identities = 16/59 (27%), Positives = 24/59 (40%)

Query: 415 RRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRH 473
              +   P +C  C+ S +S   L+ HE  H     F C  C     +   + KHMK+ 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 8/30 (26%), Positives = 11/30 (36%)

Query: 300 RIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
              +   P  CS C      K  ++ H RI
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERI 31

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 66.8 bits (164), Expect = 5e-14
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 32/98 (32%)

Query: 236 NLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNL 295
           +  S  R  H+GE+P++C  C+  F +   ++ H+                         
Sbjct: 2   SSGSSGRT-HSGEKPYECYICHARFTQSGTMKMHI------------------------- 35

Query: 296 IQHYRIHTDE--KPFNCSLCEKQFRQKIHVKNHLRIIH 331
                    E    F+C  C+    +K  +  HLR  H
Sbjct: 36  ----LQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.6 bits (148), Expect = 7e-12
 Identities = 17/122 (13%), Positives = 26/122 (21%), Gaps = 50/122 (40%)

Query: 132 HFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHT--DLKPYLCLTCGQSFRTFNLM 189
              +  R H   KPY C  C   F    +   H       ++  + C  C          
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIA----- 56

Query: 190 KRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGER 249
                                                      + S+L  H+R  H+   
Sbjct: 57  -------------------------------------------RKSDLGVHLRKQHSYSG 73

Query: 250 PF 251
           P 
Sbjct: 74  PS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.3 bits (142), Expect = 6e-11
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 586 NFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIH--DNHKPYKCTKCNYSARVLSNK 643
           +     R H  ++P+ C +C+  F Q  T+  H      +N   + C  C+      S+ 
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 644 LAHERIYH 651
             H R  H
Sbjct: 62  GVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.1 bits (126), Expect = 8e-09
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 294 NLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNF----CDHCFK 341
           +     R H+ EKP+ C +C  +F Q   +K H+   H  N     C HC  
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDT 53

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 51.8 bits (125), Expect = 9e-09
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 413 HMRRHTGFKPYQCKTCNASYASMRVLQHHEITHS--KTLKFPCINCGKYFTKLEYMIKHM 470
             R H+G KPY+C  C+A +     ++ H +        KF C +C     +   +  H+
Sbjct: 6   SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

Query: 471 KRH 473
           ++ 
Sbjct: 66  RKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 18 ERTYHCPLCSKQFSKLTTLKRHVGIHM--KTQPVRCGYCGQFFLDLGRLNAHIRQRHTSN 75
          E+ Y C +C  +F++  T+K H+            C +C         L  H+R++H+ +
Sbjct: 13 EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS 72

Query: 76 K 76
           
Sbjct: 73 G 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.4 bits (111), Expect = 7e-07
 Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 3/60 (5%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHL--NIKPYACKYCGNAFAHKSSRDAHQ-NIHTDLKPY 174
           Y C  C  R       K H+      N+  + C +C    A KS    H    H+   P 
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.7 bits (104), Expect = 7e-06
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 5/71 (7%)

Query: 673 LRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHL--KVRRFSCTNCSLNFTYLS 730
                +  HS E   P +C IC+  F     +  H  +     V +F C +C       S
Sbjct: 3   SGSSGRT-HSGEK--PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS 59

Query: 731 NLIRHRRIKHS 741
           +L  H R +HS
Sbjct: 60  DLGVHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 11/48 (22%), Positives = 15/48 (31%), Gaps = 3/48 (6%)

Query: 584 KTNFNIHMRIH--GKDRPFSCLLCNNTFAQLSTLLNHER-IHDNHKPY 628
                +H+          F C  C+   A+ S L  H R  H    P 
Sbjct: 28  SGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.7 bits (99), Expect = 4e-05
 Identities = 14/64 (21%), Positives = 25/64 (39%)

Query: 703 NLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDY 762
           +  +    H   + + C  C   FT    +  H   KH+++  K+ C +C      K D 
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 763 TNHV 766
             H+
Sbjct: 62  GVHL 65

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.4 bits (98), Expect = 5e-05
 Identities = 17/94 (18%), Positives = 27/94 (28%), Gaps = 31/94 (32%)

Query: 614 TLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCL 673
           +  +  R H   KPY+C  C+                              F+      +
Sbjct: 2   SSGSSGRTHSGEKPYECYICHAR----------------------------FTQS--GTM 31

Query: 674 RRHRKIFHSNESYAPAKCKICNQSFALFSNLNAH 707
           + H       E+ A   C  C+   A  S+L  H
Sbjct: 32  KMHILQ-KHTENVAKFHCPHCDTVIARKSDLGVH 64

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 2/69 (2%)

Query: 35  TLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYKSKYK 94
           +       H   +P  C  C   F   G +  HI Q+HT N    + C  C+     K  
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK-FHCPHCDTVIARKSD 60

Query: 95  FERH-KNTH 102
              H +  H
Sbjct: 61  LGVHLRKQH 69

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 64.9 bits (159), Expect = 3e-13
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 245 HTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNV--CNYSSSLKWNLIQHYRIH 302
            T         C   + +  HL+ H+  H G+ K ++C+   C +  +    L +HYR H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGE-KPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 303 TDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           T  +PF C  C++ F +  H+  H++ 
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 7/93 (7%)

Query: 384 HIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCK--TCNASYASMRVLQHH 441
              +H         A CG T+  + +   H+R HTG KPY C    C   +A    L  H
Sbjct: 2   RTATHTCD-----YAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH 56

Query: 442 EITHSKTLKFPCINCGKYFTKLEYMIKHMKRHF 474
              H+    F C  C + F++ +++  HMKRHF
Sbjct: 57  YRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 32/137 (23%), Positives = 37/137 (27%), Gaps = 51/137 (37%)

Query: 140 HLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC--LTCGQSFRTFNLMKRHNLCDH 197
                      CG  +   S   AH   HT  KPY C    CG  F              
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFA------------- 48

Query: 198 QDVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCN 257
                                              +   L  H R  HTG RPFQC+ C+
Sbjct: 49  -----------------------------------RSDELTRHYRK-HTGHRPFQCQKCD 72

Query: 258 YAFKEKHHLETHVNLHL 274
            AF    HL  H+  H 
Sbjct: 73  RAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 52.5 bits (127), Expect = 8e-09
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 117 IYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDLKPY 174
               + C        H KAHLR H   KPY C +  CG  FA       H   HT  +P+
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66

Query: 175 LCLTCGQSF 183
            C  C ++F
Sbjct: 67  QCQKCDRAF 75

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.8 bits (112), Expect = 8e-07
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 588 NIHMRIHGKDRPFSC--LLCNNTFAQLSTLLNHERIHDNHKPYKCTKCN 634
             H+R H  ++P+ C    C   FA+   L  H R H  H+P++C KC+
Sbjct: 24  KAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 41.4 bits (98), Expect = 6e-05
 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGY--CGQFFLDLGRLNAHIRQRHTSN 75
             T     C K ++K + LK H+  H   +P  C +  CG  F     L  H R +HT +
Sbjct: 5   THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGH 63

Query: 76  KKIYYKCDKCNKTYKSKYKFERHKNTH 102
           +   ++C KC++ +        H   H
Sbjct: 64  RP--FQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 416 RHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPC--INCGKYFTKLEYMIKHMKRH 473
           + T         C  +Y     L+ H  TH+    + C    CG  F + + + +H ++H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 474 FNTNKPVCEICSQTMAHNQVLQRHMTLHF 502
                  C+ C +  + +  L  HM  HF
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 22/98 (22%), Positives = 32/98 (32%), Gaps = 10/98 (10%)

Query: 71  RHTSNKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYR 130
           + T+          C KTY      + H  TH  E   Y C +         C ++    
Sbjct: 1   KRTATHT--CDYAGCGKTYTKSSHLKAHLRTHTGEKP-YHCDW-------DGCGWKFARS 50

Query: 131 YHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIH 168
                H R H   +P+ C+ C  AF+       H   H
Sbjct: 51  DELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 64.4 bits (158), Expect = 4e-13
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 30/101 (29%)

Query: 229 KPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYS 288
           K +K+ S L +H+ I H+  RP+ C+YC   F                         +  
Sbjct: 9   KSFKRSSTLSTHLLI-HSDTRPYPCQYCGKRF-------------------------HQK 42

Query: 289 SSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           S    ++ +H  IHT EKP  C +C K F Q  ++  H R 
Sbjct: 43  S----DMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 62.1 bits (152), Expect = 3e-12
 Identities = 34/130 (26%), Positives = 48/130 (36%), Gaps = 49/130 (37%)

Query: 146 YACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLC 205
           + CK CG +F   S+   H  IH+D +PY C  CG+ F                      
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFH--------------------- 40

Query: 206 NFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHH 265
                                      Q S+++ H  I HTGE+P +C+ C  AF +  +
Sbjct: 41  ---------------------------QKSDMKKHTFI-HTGEKPHKCQVCGKAFSQSSN 72

Query: 266 LETHVNLHLG 275
           L TH   H G
Sbjct: 73  LITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 59.0 bits (144), Expect = 3e-11
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCL 177
           + C  C    +       HL IH + +PY C+YCG  F  KS    H  IHT  KP+ C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 178 TCGQSFRTFNLMKRHNLCDHQ 198
            CG++F      +  NL  H 
Sbjct: 62  VCGKAFS-----QSSNLITHS 77

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 54.4 bits (132), Expect = 2e-09
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 80  YKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRI 139
           + C  C K++K       H   H               YPC +C  R   +   K H  I
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRP----------YPCQYCGKRFHQKSDMKKHTFI 51

Query: 140 HLNIKPYACKYCGNAFAHKSSRDAHQNIHT 169
           H   KP+ C+ CG AF+  S+   H   HT
Sbjct: 52  HTGEKPHKCQVCGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 52.4 bits (127), Expect = 7e-09
 Identities = 22/66 (33%), Positives = 30/66 (45%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNK 643
            +  + H+ IH   RP+ C  C   F Q S +  H  IH   KP+KC  C  +    SN 
Sbjct: 14  SSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL 73

Query: 644 LAHERI 649
           + H R 
Sbjct: 74  ITHSRK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 51.3 bits (124), Expect = 2e-08
 Identities = 20/51 (39%), Positives = 27/51 (52%)

Query: 279 SFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           SF+C +C  S      L  H  IH+D +P+ C  C K+F QK  +K H  I
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI 51

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 49.0 bits (118), Expect = 1e-07
 Identities = 21/77 (27%), Positives = 37/77 (48%)

Query: 397 CAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINC 456
           C +CG +FK +     H+  H+  +PY C+ C   +     ++ H   H+      C  C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 457 GKYFTKLEYMIKHMKRH 473
           GK F++   +I H ++H
Sbjct: 64  GKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 43.2 bits (103), Expect = 1e-05
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 20  TYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQR-HTSNKKI 78
           ++ C +C K F + +TL  H+ IH  T+P  C YCG+ F     +  H     HT  K  
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH--TFIHTGEKP- 57

Query: 79  YYKCDKCNKTYKSKYKFERHKNTH 102
            +KC  C K +        H   H
Sbjct: 58  -HKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 42.4 bits (101), Expect = 2e-05
 Identities = 29/114 (25%), Positives = 38/114 (33%), Gaps = 39/114 (34%)

Query: 717 FSCTNCSLNFTYLSNLIRHRRIKHSQHEGK--YVCNYCGKSYIDKRDYTNHVSVHMERKS 774
           F C  C  +F   S L  H  I    H     Y C YCGK                    
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLI----HSDTRPYPCQYCGK-------------------- 37

Query: 775 GYTQRCHKCNATFRIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
                       F  K  + +H   H  +  ++C  C K F Q+++ I HS KH
Sbjct: 38  -----------RFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 42.0 bits (100), Expect = 3e-05
 Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 33/112 (29%)

Query: 600 FSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH 659
           F C +C  +F + STL  H  IH + +PY C  C                          
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKR----------------------- 38

Query: 660 INNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKH 711
                F  K  S +++H  I H+ E   P KC++C ++F+  SNL  H  KH
Sbjct: 39  -----FHQK--SDMKKHTFI-HTGEK--PHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 38.6 bits (91), Expect = 5e-04
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIH 622
           K++   H  IH  ++P  C +C   F+Q S L+ H R H
Sbjct: 42  KSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 64.4 bits (158), Expect = 5e-13
 Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 40/108 (37%)

Query: 228 IKPYK---------QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTK 278
           +KP++         +  +L +HIR  HTGE+PF C  C   F                  
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDE------------- 46

Query: 279 SFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNH 326
                             +H  I     P      E+   +  H++N 
Sbjct: 47  ----------------RKRHRDIQH-ILPILEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 61.4 bits (150), Expect = 6e-12
 Identities = 21/164 (12%), Positives = 34/164 (20%), Gaps = 76/164 (46%)

Query: 143 IKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRN 202
           +KP+ C+ C   F+       H   HT  KP+ C  CG+ F                   
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA------------------ 42

Query: 203 YLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKE 262
                                         +    + H  I      P           +
Sbjct: 43  ------------------------------RSDERKRHRDI-QH-ILPILEDKVEELLSK 70

Query: 263 KHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEK 306
            +HLE                            +   +    E+
Sbjct: 71  NYHLENE--------------------------VARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 56.0 bits (136), Expect = 4e-10
 Identities = 20/52 (38%), Positives = 27/52 (51%)

Query: 278 KSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           K F C +C  + S   +L  H R HT EKPF C +C ++F +    K H  I
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI 53

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 51.3 bits (124), Expect = 2e-08
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 586 NFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC 633
           +   H+R H  ++PF+C +C   FA+      H  I  +  P    K 
Sbjct: 18  HLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILEDKV 64

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 51.0 bits (123), Expect = 3e-08
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 3/78 (3%)

Query: 397 CAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLK-FPCIN 455
           C +C   F  + +   H+R HTG KP+ C  C   +A     + H       +       
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ--HILPILEDK 63

Query: 456 CGKYFTKLEYMIKHMKRH 473
             +  +K  ++   + R 
Sbjct: 64  VEELLSKNYHLENEVARL 81

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 47.9 bits (115), Expect = 3e-07
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 688 PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKY 747
           P +C+IC ++F+   +L  H   H   + F+C  C   F       RHR I   QH    
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI---QHILPI 59

Query: 748 VCNYCGKSYIDKRDYTNHVS 767
           + +   +         N V+
Sbjct: 60  LEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 47.9 bits (115), Expect = 3e-07
 Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 4/79 (5%)

Query: 21 YHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYY 80
          + C +C + FS+   L  H+  H   +P  C  CG+ F        H             
Sbjct: 4  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI-QHILP---I 59

Query: 81 KCDKCNKTYKSKYKFERHK 99
            DK  +     Y  E   
Sbjct: 60 LEDKVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 46.3 bits (111), Expect = 1e-06
 Identities = 15/52 (28%), Positives = 21/52 (40%)

Query: 598 RPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERI 649
           +PF C +C   F++   L  H R H   KP+ C  C         +  H  I
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI 53

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 17/112 (15%), Positives = 30/112 (26%), Gaps = 38/112 (33%)

Query: 714 VRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGK--YVCNYCGKSYIDKRDYTNHVSVHME 771
           ++ F C  C  NF+   +L  H R     H G+  + C+ CG+                 
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRT----HTGEKPFACDICGRK---------------- 40

Query: 772 RKSGYTQRCHKCNATFRIKKFLTRHMKTHLIQ-YRCTRCNKTFKQNTSFIRH 822
               + +                RH     I      +  +   +N      
Sbjct: 41  ----FARSDE-----------RKRHRDIQHILPILEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 451 FPCINCGKYFTKLEYMIKHMKRHFNTN-KP-VCEICSQTMAHNQVLQRHMTLHFTQNKHP 508
           F C  C + F++ +++  H++ H  T  KP  C+IC +  A +   +RH  +        
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTH--TGEKPFACDICGRKFARSDERKRHRDIQ-HILPIL 60

Query: 509 CNRCNASFSSMVQLSCHQ--IRAH 530
            ++     S    L      ++  
Sbjct: 61  EDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 421 KPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKP- 479
           KP+QC+ C  +++    L  H  TH+    F C  CG+ F + +   +H         P 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ--HILPI 59

Query: 480 VCEICSQTMAHNQVLQRHMT 499
           + +   + ++ N  L+  + 
Sbjct: 60  LEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 38.6 bits (91), Expect = 5e-04
 Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHT 73
          E+ + C +C ++F++    KRH  I     P+      +       L   + +   
Sbjct: 29 EKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLKK 83

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 64.4 bits (158), Expect = 5e-13
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 30/112 (26%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQ----- 198
              AC+ CG  F      + H+  H+  KPY C  CG  F+     ++  +  H      
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFK-----RKDRMSYHVRSHDG 60

Query: 199 -DVRNYLCNFCNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGER 249
              + Y+C  C K                    + +  +L  HI+  H+G  
Sbjct: 61  SVGKPYICQSCGKG-------------------FSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 63.7 bits (156), Expect = 1e-12
 Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 12/89 (13%)

Query: 229 KPYK---------QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLG-KTK 278
                         + +L  H    H+GE+P+ C  C   FK K  +  HV  H G   K
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLS-HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64

Query: 279 SFNCNVCNYSSSLKWNLIQHY-RIHTDEK 306
            + C  C    S   +L  H  ++H+   
Sbjct: 65  PYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 59.4 bits (145), Expect = 3e-11
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHT--DLKPYL 175
             C  C    R  YH   H   H   KPY+C  CG  F  K     H   H     KPY+
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 176 CLTCGQSFR 184
           C +CG+ F 
Sbjct: 68  CQSCGKGFS 76

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 55.6 bits (135), Expect = 8e-10
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 394 PSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFP- 452
              C +CG  F+  Y+   H   H+G KPY C  C   +     + +H  +H  ++  P 
Sbjct: 7   GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66

Query: 453 -CINCGKYFTKLEYMIKHMKR 472
            C +CGK F++ +++  H+K+
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 55.2 bits (134), Expect = 1e-09
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 29/85 (34%)

Query: 245 HTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTD 304
            +G     C+ C                     K F             +L +H   H+ 
Sbjct: 2   SSGSSGVACEICG--------------------KIFRD------VY---HLNRHKLSHSG 32

Query: 305 EKPFNCSLCEKQFRQKIHVKNHLRI 329
           EKP++C +C  +F++K  +  H+R 
Sbjct: 33  EKPYSCPVCGLRFKRKDRMSYHVRS 57

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 53.3 bits (129), Expect = 4e-09
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHD--NHKPYKCTKCNYSARVLS 641
             + N H   H  ++P+SC +C   F +   +  H R HD    KPY C  C        
Sbjct: 20  VYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPD 79

Query: 642 NKLAHERIYH 651
           +   H +  H
Sbjct: 80  HLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 50.6 bits (122), Expect = 4e-08
 Identities = 22/109 (20%), Positives = 32/109 (29%), Gaps = 31/109 (28%)

Query: 599 PFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC 658
             +C +C   F  +  L  H+  H   KPY C  C                      FK 
Sbjct: 7   GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLR-------------------FKR 47

Query: 659 HINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAH 707
                         +  H +  H      P  C+ C + F+   +LN H
Sbjct: 48  K-----------DRMSYHVRS-HDGSVGKPYICQSCGKGFSRPDHLNGH 84

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.8 bits (107), Expect = 5e-06
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 2/84 (2%)

Query: 417 HTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHF-N 475
            +G     C+ C   +  +  L  H+++HS    + C  CG  F + + M  H++ H  +
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 476 TNKP-VCEICSQTMAHNQVLQRHM 498
             KP +C+ C +  +    L  H+
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHI 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 43.2 bits (103), Expect = 2e-05
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 7/80 (8%)

Query: 747 YVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTH----LI 802
             C  CGK + D      H   H   K  Y+  C  C   F+ K  ++ H+++H      
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKP-YS--CPVCGLRFKRKDRMSYHVRSHDGSVGK 64

Query: 803 QYRCTRCNKTFKQNTSFIRH 822
            Y C  C K F +      H
Sbjct: 65  PYICQSCGKGFSRPDHLNGH 84

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 41.7 bits (99), Expect = 5e-05
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 2/91 (2%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
                C +C K F  +  L RH   H   +P  C  CG  F    R++ H+R  H  +  
Sbjct: 5   SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVG 63

Query: 78  IYYKCDKCNKTYKSKYKFERH-KNTHVTENS 107
             Y C  C K +        H K  H   +S
Sbjct: 64  KPYICQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 62.4 bits (152), Expect = 2e-12
 Identities = 17/90 (18%), Positives = 25/90 (27%), Gaps = 32/90 (35%)

Query: 245 HTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTD 304
            +G    QC+ C +  ++K  L  H                              R H +
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQ-----------------------------RKHAE 32

Query: 305 ---EKPFNCSLCEKQFRQKIHVKNHLRIIH 331
                 F C  C K+F +   V  H    H
Sbjct: 33  TVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.9 bits (122), Expect = 2e-08
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 3/71 (4%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHTDL---KPYLCLTCGQSFRTFNLMKRHNLCDHQDV 200
               C+ CG     K+S + HQ  H +      + C  CG+ F   + +  H    H  +
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 201 RNYLCNFCNKT 211
                     +
Sbjct: 66  LLAPQESSGPS 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.7 bits (119), Expect = 6e-08
 Identities = 13/65 (20%), Positives = 20/65 (30%), Gaps = 3/65 (4%)

Query: 598 RPFSCLLCNNTFAQLSTLLNHERIHDN---HKPYKCTKCNYSARVLSNKLAHERIYHQDH 654
               C +C  T  Q ++L  H+R H        + C  C        +  AH    H   
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 655 VFKCH 659
           +    
Sbjct: 66  LLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.7 bits (119), Expect = 6e-08
 Identities = 18/103 (17%), Positives = 26/103 (25%), Gaps = 27/103 (26%)

Query: 302 HTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKS 361
            +      C +C    RQK  +  H R  H        F              CE C K 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFP-------------CEFCGKR 47

Query: 362 NNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTF 404
                      F+    + + AH    H     +     G + 
Sbjct: 48  -----------FEKP--DSVAAHRSKSHPALLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 417 HTGFKPYQCKTCNASYASMRVLQHHEITHSKTLK---FPCINCGKYFTKLEYMIKHMKRH 473
            +G    QC+ C  +      L  H+  H++T+    FPC  CGK F K + +  H  + 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 474 FNTNKPVCEICS 485
                   +  S
Sbjct: 62  HPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 46.2 bits (110), Expect = 8e-07
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 397 CAVCGDTFKTNYNYFVHMRRHT---GFKPYQCKTCNASYASMRVL-QHHEITHSKTLKFP 452
           C +CG T +   +   H R+H        + C+ C   +     +  H   +H   L  P
Sbjct: 10  CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69

Query: 453 CINCGK 458
             + G 
Sbjct: 70  QESSGP 75

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 3/66 (4%)

Query: 717 FSCTNCSLNFTYLSNLIRHRRIKHSQHEGK--YVCNYCGKSYIDKRDYTNHVSVHMERKS 774
             C  C       ++L  H+R  H++      + C +CGK +        H S       
Sbjct: 8   LQCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 775 GYTQRC 780
              Q  
Sbjct: 67  LAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 688 PAKCKICNQSFALFSNLNAHYNKH---LKVRRFSCTNCSLNFTYLSNLIRHRRIKHS 741
             +C+IC  +    ++LN H  KH   +   RF C  C   F    ++  HR   H 
Sbjct: 7   GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.9 bits (104), Expect = 5e-06
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 3/62 (4%)

Query: 18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKTQ---PVRCGYCGQFFLDLGRLNAHIRQRHTS 74
               C +C     +  +L  H   H +T       C +CG+ F     + AH  + H +
Sbjct: 5  SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

Query: 75 NK 76
            
Sbjct: 65 LL 66

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 10/53 (18%), Positives = 15/53 (28%), Gaps = 3/53 (5%)

Query: 584 KTNFNIHMRIH---GKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC 633
           K + N H R H        F C  C   F +  ++  H             + 
Sbjct: 20  KASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 11/57 (19%), Positives = 14/57 (24%)

Query: 744 EGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTH 800
                C  CG +   K     H   H E  +     C  C   F     +  H    
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 8/78 (10%)

Query: 80  YKCDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLRI 139
            +C+ C  T + K     H+  H    +          +PC FC  R        AH   
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALR-------FPCEFCGKRFEKPDSVAAHRSK 60

Query: 140 -HLNIKPYACKYCGNAFA 156
            H  +     +  G +  
Sbjct: 61  SHPALLLAPQESSGPSSG 78

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 48  PVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIY-YKCDKCNKTYKSKYKFERHKNTHVTEN 106
            ++C  CG        LN H R +H        + C+ C K ++       H++      
Sbjct: 7   GLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 107 SEYPC 111
              P 
Sbjct: 66  LLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 779 RCHKCNATFRIKKFLTRHMKTHLIQ-----YRCTRCNKTFKQNTSFIRHSLKH 826
           +C  C  T R K  L  H + H        + C  C K F++  S   H  K 
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 10/70 (14%), Positives = 18/70 (25%), Gaps = 3/70 (4%)

Query: 451 FPCINCGKYFTKLEYMIKHMKRH--FNTNKP-VCEICSQTMAHNQVLQRHMTLHFTQNKH 507
             C  CG    +   +  H ++H          CE C +       +  H +        
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 508 PCNRCNASFS 517
                +   S
Sbjct: 68  APQESSGPSS 77

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 61.7 bits (151), Expect = 3e-12
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 30/95 (31%)

Query: 235 SNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWN 294
            +   H  +    ++P++C  C  +F+ K +L                            
Sbjct: 3   HHHHHHSHM-THSDKPYKCDRCQASFRYKGNL---------------------------- 33

Query: 295 LIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
              H  +HT EKP+ C++C  QF +  ++K H RI
Sbjct: 34  -ASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI 67

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.4 bits (145), Expect = 2e-11
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 132 HFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKR 191
           H   H  +  + KPY C  C  +F +K +  +H+ +HT  KPY C  CG  F      + 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFN-----RP 58

Query: 192 HNLCDHQ 198
            NL  H 
Sbjct: 59  ANLKTHT 65

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 52.5 bits (127), Expect = 5e-09
 Identities = 18/64 (28%), Positives = 29/64 (45%)

Query: 586 NFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLA 645
           + + H  +   D+P+ C  C  +F     L +H+ +H   KPY+C  C       +N   
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 646 HERI 649
           H RI
Sbjct: 64  HTRI 67

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 50.1 bits (121), Expect = 4e-08
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPY 174
           Y C  C    RY+ +  +H  +H   KPY C  CG  F   ++   H  IH+  KPY
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 47.8 bits (115), Expect = 2e-07
 Identities = 31/150 (20%), Positives = 40/150 (26%), Gaps = 78/150 (52%)

Query: 159 SSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTL 218
                H ++    KPY C  C  SFR                                  
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFR---------------------------------- 28

Query: 219 DNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTK 278
                            NL SH  + HTGE+P++C  C   F                  
Sbjct: 29  --------------YKGNLASHKTV-HTGEKPYRCNICGAQF------------------ 55

Query: 279 SFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
                  N  +    NL  H RIH+ EKP+
Sbjct: 56  -------NRPA----NLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 44.0 bits (105), Expect = 5e-06
 Identities = 17/62 (27%), Positives = 25/62 (40%)

Query: 412 VHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMK 471
            H       KPY+C  C AS+     L  H+  H+    + C  CG  F +   +  H +
Sbjct: 7   HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

Query: 472 RH 473
            H
Sbjct: 67  IH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.8 bits (102), Expect = 1e-05
 Identities = 16/45 (35%), Positives = 23/45 (51%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPY 628
           K N   H  +H  ++P+ C +C   F + + L  H RIH   KPY
Sbjct: 30  KGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 41.3 bits (98), Expect = 5e-05
 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 381 LKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQH 440
              H    H  K P  C  C  +F+   N   H   HTG KPY+C  C A +     L+ 
Sbjct: 5   HHHHSHMTHSDK-PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 441 HEITH 445
           H   H
Sbjct: 64  HTRIH 68

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.7 bits (151), Expect = 3e-12
 Identities = 24/97 (24%), Positives = 34/97 (35%), Gaps = 30/97 (30%)

Query: 233 QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLK 292
              +            R ++C  C                     KSF+       SS  
Sbjct: 2   SSGSSGRSEWQ-QRERRRYKCDECG--------------------KSFSH------SS-- 32

Query: 293 WNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
            +L +H R HT EKP+ C  C K F Q+ H+  H R+
Sbjct: 33  -DLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.0 bits (144), Expect = 2e-11
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 5/67 (7%)

Query: 132 HFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKR 191
                       + Y C  CG +F+H S    H+  HT  KPY C  CG++F      +R
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFI-----QR 59

Query: 192 HNLCDHQ 198
            +L  H 
Sbjct: 60  SHLIGHH 66

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.4 bits (127), Expect = 5e-09
 Identities = 28/153 (18%), Positives = 40/153 (26%), Gaps = 78/153 (50%)

Query: 156 AHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDR 215
               S    +    + + Y C  CG+SF                                
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDECGKSFS------------------------------- 29

Query: 216 KTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLG 275
                              S+L  H R  HTGE+P++C  C  AF ++ H          
Sbjct: 30  -----------------HSSDLSKHRRT-HTGEKPYKCDECGKAFIQRSH---------- 61

Query: 276 KTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPF 308
                              LI H+R+HT   P 
Sbjct: 62  -------------------LIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.1 bits (126), Expect = 8e-09
 Identities = 19/67 (28%), Positives = 29/67 (43%)

Query: 583 SKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSN 642
           S  +         + R + C  C  +F+  S L  H R H   KPYKC +C  +    S+
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 643 KLAHERI 649
            + H R+
Sbjct: 62  LIGHHRV 68

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.2 bits (116), Expect = 2e-07
 Identities = 19/57 (33%), Positives = 22/57 (38%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPY 174
           Y C  C     +      H R H   KPY C  CG AF  +S    H  +HT   P 
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.4 bits (101), Expect = 2e-05
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYK 629
            ++ + H R H  ++P+ C  C   F Q S L+ H R+H    P  
Sbjct: 31  SSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.3 bits (93), Expect = 2e-04
 Identities = 17/49 (34%), Positives = 23/49 (46%)

Query: 397 CAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITH 445
           C  CG +F  + +   H R HTG KPY+C  C  ++     L  H   H
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.0 bits (92), Expect = 4e-04
 Identities = 16/61 (26%), Positives = 27/61 (44%)

Query: 413 HMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKR 472
              +    + Y+C  C  S++    L  H  TH+    + C  CGK F +  ++I H + 
Sbjct: 9   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

Query: 473 H 473
           H
Sbjct: 69  H 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.8 bits (89), Expect = 8e-04
 Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 671 SCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLS 730
               R              KC  C +SF+  S+L+ H   H   + + C  C   F   S
Sbjct: 4   GSSGRSEWQ-QRERR--RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60

Query: 731 NLIRHRRI 738
           +LI H R+
Sbjct: 61  HLIGHHRV 68

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 30/93 (32%)

Query: 237 LQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLI 296
                 I H+GE+P+ C  C  AF                             S    L+
Sbjct: 2   SSGSSGI-HSGEKPYGCVECGKAF-----------------------------SRSSILV 31

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           QH R+HT EKP+ C  C K F Q   + NH RI
Sbjct: 32  QHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 58.6 bits (143), Expect = 4e-11
 Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLC 195
              IH   KPY C  CG AF+  S    HQ +HT  KPY CL CG++F      +   L 
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFS-----QNSGLI 59

Query: 196 DHQ 198
           +HQ
Sbjct: 60  NHQ 62

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 54.0 bits (131), Expect = 2e-09
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERI 649
              IH  ++P+ C+ C   F++ S L+ H+R+H   KPYKC +C  +    S  + H+RI
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 52.1 bits (126), Expect = 8e-09
 Identities = 20/57 (35%), Positives = 22/57 (38%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPY 174
           Y C  C            H R+H   KPY C  CG AF+  S    HQ IHT     
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.5 bits (122), Expect = 2e-08
 Identities = 30/145 (20%), Positives = 41/145 (28%), Gaps = 78/145 (53%)

Query: 164 HQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHIL 223
              IH+  KPY C+ CG++F                                        
Sbjct: 5   SSGIHSGEKPYGCVECGKAFS--------------------------------------- 25

Query: 224 GHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCN 283
                    + S L  H R+ HTGE+P++C  C  AF                       
Sbjct: 26  ---------RSSILVQHQRV-HTGEKPYKCLECGKAF----------------------- 52

Query: 284 VCNYSSSLKWNLIQHYRIHTDEKPF 308
             + +S     LI H RIHT     
Sbjct: 53  --SQNS----GLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 43.6 bits (104), Expect = 7e-06
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPY 628
            +    H R+H  ++P+ CL C   F+Q S L+NH+RIH +    
Sbjct: 27  SSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.1 bits (95), Expect = 1e-04
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 413 HMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKR 472
               H+G KPY C  C  +++   +L  H+  H+    + C+ CGK F++   +I H + 
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

Query: 473 H 473
           H
Sbjct: 65  H 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 394 PSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHS 446
           P  C  CG  F  +     H R HTG KPY+C  C  +++    L +H+  H+
Sbjct: 14  PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 673 LRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNL 732
                 I HS E   P  C  C ++F+  S L  H   H   + + C  C   F+  S L
Sbjct: 2   SSGSSGI-HSGEK--PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGL 58

Query: 733 IRHRRI 738
           I H+RI
Sbjct: 59  INHQRI 64

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 31/91 (34%)

Query: 229 KPYKQLSNLQSHIRISHTGERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNVCN 286
           + +     L  H +  H  ++ F C    C  +F  K H                     
Sbjct: 17  RIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKH--------------------- 55

Query: 287 YSSSLKWNLIQHYRIHTDEKPFNCSLCEKQF 317
                   L +H ++H+D + + C       
Sbjct: 56  --------LKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 54.9 bits (133), Expect = 9e-10
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 5/71 (7%)

Query: 118 YPCSF--CAYRGRYRYHFKAHLRI-HLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDLK 172
            PC F  C      R +   H +  H++ K ++C    CG +F  K     H  +H+D +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 173 PYLCLTCGQSF 183
            Y+C   G S 
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 3/53 (5%)

Query: 584 KTNFNIHMRI-HGKDRPFSC--LLCNNTFAQLSTLLNHERIHDNHKPYKCTKC 633
           +   N H +  H   + FSC    C  +F     L  H ++H + + Y C   
Sbjct: 22  RQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 381 LKAHIKSHHFPKQPSIC--AVCGDTFKTNYNYFVHMRRHTGFKPYQCKTC 428
           L  H K  H  ++   C    CG +F    +   HM+ H+  + Y C+  
Sbjct: 25  LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 60.3 bits (147), Expect = 2e-11
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 32/103 (31%)

Query: 229 KPYKQLSNLQSHIRISHTGERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNVCN 286
           K Y + S+L++H+R  HTGE+P++C +  C++ F     L  H                 
Sbjct: 25  KVYTKSSHLKAHLRT-HTGEKPYKCTWEGCDWRFARSDELTRH----------------- 66

Query: 287 YSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                       YR HT  KPF C +C + F +  H+  H++ 
Sbjct: 67  ------------YRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 374 KTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQC--KTCNAS 431
            +          + H+          C   +  + +   H+R HTG KPY+C  + C+  
Sbjct: 2   SSGSSGPDLEKRRIHYCDY-----PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWR 56

Query: 432 YASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFN 475
           +A    L  H   H+    F C  C + F++ +++  HMKRH N
Sbjct: 57  FARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 50.3 bits (121), Expect = 6e-08
 Identities = 29/67 (43%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 132 HFKAHLRIHLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSF-RTFNL 188
           H KAHLR H   KPY C +  C   FA       H   HT  KP+ C  C +SF R+ +L
Sbjct: 32  HLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL 91

Query: 189 ---MKRH 192
              MKRH
Sbjct: 92  ALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%)

Query: 13  HESQDERTYHC--PLCSKQFSKLTTLKRHVGIHMKTQPVRCGY--CGQFFLDLGRLNAHI 68
            + +  R ++C  P C+K ++K + LK H+  H   +P +C +  C   F     L  H 
Sbjct: 8   PDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY 67

Query: 69  RQRHTSNKKIYYKCDKCNKTYKSKYKFERHKNTH 102
           R +HT  K   ++C  CN+++        H   H
Sbjct: 68  R-KHTGAKP--FQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 589 IHMRIHGKDRPFSC--LLCNNTFAQLSTLLNHERIHDNHKPYKCTKCN 634
            H+R H  ++P+ C    C+  FA+   L  H R H   KP++C  CN
Sbjct: 35  AHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 24/104 (23%), Positives = 33/104 (31%), Gaps = 10/104 (9%)

Query: 69  RQRHTSNKKIYYKCDK--CNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYR 126
                  K+  + CD   C K Y      + H  TH  E   Y C +         C +R
Sbjct: 5   SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP-YKCTW-------EGCDWR 56

Query: 127 GRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTD 170
                    H R H   KP+ C  C  +F+       H   H +
Sbjct: 57  FARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 39.1 bits (92), Expect = 5e-04
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 18  ERTYHC--PLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTS 74
           E+ Y C    C  +F++   L RH   H   +P +CG C + F     L  H++ RH +
Sbjct: 43  EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK-RHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 17/103 (16%)

Query: 641 SNKLAHERIYHQDHVFKCHINNCIFSTKFYSC---LRRHRKIFHSNESYAPAKCKI--CN 695
              L   RI+       C    C   TK Y+    L+ H +  H+ E   P KC    C+
Sbjct: 7   GPDLEKRRIH------YCDYPGC---TKVYTKSSHLKAHLRT-HTGEK--PYKCTWEGCD 54

Query: 696 QSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRI 738
             FA    L  HY KH   + F C  C+ +F+   +L  H + 
Sbjct: 55  WRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 57.6 bits (140), Expect = 8e-11
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 27/89 (30%)

Query: 245 HTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTD 304
             GE  ++CK C+  +    +   H                                  +
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRH---------------------------YVTSHKRN 37

Query: 305 EKPFNCSLCEKQFRQKIHVKNHLRIIHNM 333
            K + C  C K+F +K ++  H++IIH +
Sbjct: 38  VKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.1 bits (118), Expect = 6e-08
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 592 RIHGKDRPFSCLLCNNTFAQLSTLLNHERI--HDNHKPYKCTKCNYSARVLSNKLAHERI 649
                +  + C +C+  +  +S    H       N K Y C  C        N  AH +I
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 650 YHQ 652
            H+
Sbjct: 63  IHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 229 KPYKQLSNLQSHIRIS-HTGERPFQCKYCNYAFKEKHHLETHVNLH 273
           + Y  +SN   H   S     + + C +C   F  K ++  HV + 
Sbjct: 18  RVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 415 RRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLK--FPCINCGKYFTKLEYMIKHMKR 472
               G   Y+CK C+  Y  +     H +T  K     +PC  C K FT+ + M  H+K 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 473 H 473
            
Sbjct: 63  I 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAHQ--NIHTDLKPYLCLTCGQSFRTFNLMKRH 192
                   Y CK C   + H S+   H   +   ++K Y C  C + F   + M  H
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH 59

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 10/46 (21%), Positives = 15/46 (32%), Gaps = 4/46 (8%)

Query: 300 RIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNF----CDHCFK 341
                E  + C +C + +    +   H    H  N     C  CFK
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFK 48

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 688 PAKCKICNQSFALFSNLNAHY--NKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKH 740
             +CK+C++ +   SN   HY  +    V+ + C  C   FT   N+  H +I H
Sbjct: 10  TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 717 FSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVH 769
           + C  CS  +T++SN  RH    H ++   Y C +C K +  K + T HV + 
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRI--HLNIKPYACKYCGNAFAHKSSRDAHQNIHTDL 171
           Y C  C+    +  +F  H       N+K Y C +C   F  K +  AH  I   +
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKT--QPVRCGYCGQFFLDLGRLNAHIRQRH 72
          E TY C +CS+ ++ ++   RH     K   +   C +C + F     + AH++  H
Sbjct: 8  EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.9 bits (89), Expect = 6e-04
 Identities = 8/41 (19%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 584 KTNFNIHMRI--HGKDRPFSCLLCNNTFAQLSTLLNHERIH 622
            +NF  H         + + C  C   F +   +  H +I 
Sbjct: 23  ISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 4/80 (5%)

Query: 117 IYPCSF--CAYRGRYRYHFKAHLRIHLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDLK 172
           +Y C F  C    +     K H   H    PY C +  C   F+  S    H+ +H    
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 173 PYLCLTCGQSFRTFNLMKRH 192
                +C    +T+ L  +H
Sbjct: 61  CKKDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 28/103 (27%)

Query: 229 KPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYS 288
           K +K+ + L+ H    HT + P++C                   H G  K F+       
Sbjct: 11  KAFKKHNQLKVHQFS-HTQQLPYECP------------------HEGCDKRFSL-----P 46

Query: 289 SSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIH 331
           S LK    +H ++H          C    +       H+   H
Sbjct: 47  SRLK----RHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 49.9 bits (120), Expect = 6e-08
 Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 2/75 (2%)

Query: 400 CGDTFKTNYNYFVHMRRHTGFKPYQCK--TCNASYASMRVLQHHEITHSKTLKFPCINCG 457
           CG  FK +    VH   HT   PY+C    C+  ++    L+ HE  H+        +C 
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 458 KYFTKLEYMIKHMKR 472
                    +KH+  
Sbjct: 69  FVGKTWTLYLKHVAE 83

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 589 IHMRIHGKDRPFSC--LLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAH 646
           +H   H +  P+ C    C+  F+  S L  HE++H  +   K   C++  +  +  L H
Sbjct: 21  VHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 80

Query: 647 ERIYH 651
               H
Sbjct: 81  VAECH 85

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 57.1 bits (137), Expect = 4e-10
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 5/100 (5%)

Query: 233 QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNL--HLGKT--KSFNCNVCNYS 288
             S+ + +  I  TG   F+CK C+ A+     L  H+N   H      ++ N N   +S
Sbjct: 3   SGSSGKLYGSI-FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 289 SSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLR 328
              K +L++       +K   C  C   F     +  H+ 
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 48.2 bits (114), Expect = 5e-07
 Identities = 22/102 (21%), Positives = 32/102 (31%), Gaps = 5/102 (4%)

Query: 438 LQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMK-----RHFNTNKPVCEICSQTMAHNQ 492
            + +    +   KF C +C   +  L  +  HM      R  N           +    +
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66

Query: 493 VLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQK 534
            L         Q    C  C  SF S+  LS H I+    QK
Sbjct: 67  SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.8 bits (113), Expect = 6e-07
 Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 5/108 (4%)

Query: 406 TNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHH-----EITHSKTLKFPCINCGKYF 460
           +  +  ++    TG   ++CK C+A+Y ++  L  H                        
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 461 TKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHP 508
            +   +++   +        C  C  +    Q L  HM       K  
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVS 110

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 46.7 bits (110), Expect = 2e-06
 Identities = 19/93 (20%), Positives = 25/93 (26%), Gaps = 5/93 (5%)

Query: 386 KSHHFPKQPSICAVCGDTFKTNYNYFVHMR-----RHTGFKPYQCKTCNASYASMRVLQH 440
            S         C  C   + T     VHM      R    +         S    R L  
Sbjct: 11  GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLE 70

Query: 441 HEITHSKTLKFPCINCGKYFTKLEYMIKHMKRH 473
            E          C+ CG  F  L+ +  HM + 
Sbjct: 71  MEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.9 bits (108), Expect = 3e-06
 Identities = 18/112 (16%), Positives = 35/112 (31%), Gaps = 18/112 (16%)

Query: 159 SSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRH-NLCDHQDVRNYLCNFCNKTYKDRKT 217
           SS   + +I T    + C  C  ++ T   +  H N   H    N+  +  N     +  
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 218 LDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETH 269
             + +                         ++  +C YC ++F+    L  H
Sbjct: 65  KRSLLEMEG-----------------KEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.5 bits (107), Expect = 5e-06
 Identities = 20/100 (20%), Positives = 30/100 (30%), Gaps = 7/100 (7%)

Query: 582 DSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERI-----HDNHKPYKCTKCNYS 636
            S ++  ++  I      F C  C+  +  L  L  H         DNH+        +S
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 637 ARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRH 676
                + L  E       V KC      F +     L  H
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQD--LSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 15/99 (15%), Positives = 33/99 (33%)

Query: 702 SNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRD 761
           S+   + +      +F C +CS  +  L  L  H        +  +  +        K  
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 762 YTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTH 800
             + + +  +  +    +C  C  +F   + L+ HM   
Sbjct: 65  KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 43.6 bits (102), Expect = 2e-05
 Identities = 15/126 (11%), Positives = 30/126 (23%), Gaps = 28/126 (22%)

Query: 294 NLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRII-HNMNFCDHCFKFVGPEQELNIF 352
           +   +  I T    F C  C   +   + +  H+    H  +                  
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDN----------- 54

Query: 353 RHCEVCDKSNNSYLLCWKCGFKTSVLNELKAHIKSHHFPKQPSICAVCGDTFKTNYNYFV 412
                               +       L          ++   C  CG +F++  +  V
Sbjct: 55  ---------------NNPKRWSKPRKRSLLEMEGKED-AQKVLKCMYCGHSFESLQDLSV 98

Query: 413 HMRRHT 418
           HM +  
Sbjct: 99  HMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 43.2 bits (101), Expect = 3e-05
 Identities = 14/100 (14%), Positives = 26/100 (26%), Gaps = 6/100 (6%)

Query: 127 GRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNI-----HTDLKPYLCLTCGQ 181
           G      K +  I      + CK C  A+        H N        + +         
Sbjct: 1   GSSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60

Query: 182 SFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNH 221
           S      +           +   C +C  +++  + L  H
Sbjct: 61  SKPRKRSLLEMEG-KEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 41.7 bits (97), Expect = 1e-04
 Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 8/108 (7%)

Query: 31  SKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKTYK 90
           S  ++ K +  I       RC  C   +  L  L  H+ +             + +    
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR----DDNHETDNNNP 57

Query: 91  SKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYHFKAHLR 138
            ++   R ++    E  E      + +  C +C +          H+ 
Sbjct: 58  KRWSKPRKRSLLEMEGKEDA----QKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.7 bits (92), Expect = 5e-04
 Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 6/101 (5%)

Query: 730 SNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSV--HMERKSGYTQRCHKCNATF 787
           S+   +  I       K+ C  C  +Y    + T H++   H    +  T   +    + 
Sbjct: 5   SSGKLYGSIFTG--ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 788 RIKKFLTRHMKTHLIQ--YRCTRCNKTFKQNTSFIRHSLKH 826
             K+ L         Q   +C  C  +F+       H +K 
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.4 bits (91), Expect = 7e-04
 Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 4/92 (4%)

Query: 18  ERTYHCPLCSKQFSKLTTLKRHVGI--HMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSN 75
              + C  CS  +  L  L  H+    H +                 R  + +      +
Sbjct: 17  ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76

Query: 76  KKIYYKCDKCNKTYKSKYKFERH--KNTHVTE 105
            +   KC  C  +++S      H  K  H  +
Sbjct: 77  AQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 8e-04
 Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 6/98 (6%)

Query: 671 SCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYN--KHLKVRRFSCTNCSLNFTY 728
           S  + +  IF     +   +CK C+ ++     L  H N   H +       N +     
Sbjct: 5   SSGKLYGSIFTGASKF---RCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 729 LSNLIRHRRI-KHSQHEGKYVCNYCGKSYIDKRDYTNH 765
                    +      +    C YCG S+   +D + H
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 54.0 bits (131), Expect = 9e-10
 Identities = 21/54 (38%), Positives = 34/54 (62%)

Query: 278 KSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIH 331
           +SF C VC  + + + +L +HYR HT+EKP+ C LC + F ++  +  H + IH
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRH 192
           + + C+ C  AFA +     H   HT+ KPY C  C ++F   +L+ RH
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 16/36 (44%), Positives = 18/36 (50%)

Query: 598 RPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC 633
           R F C +C   FA+   L  H R H N KPY C  C
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLC 36

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 43.2 bits (103), Expect = 6e-06
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAH-QNIHT 169
           + C  C      + H K H R H N KPY C  C  AF  +     H Q IH+
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 229 KPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETH 269
           + + +  +L+ H R  HT E+P+ C  CN AF  +  L  H
Sbjct: 10  RAFARQEHLKRHYRS-HTNEKPYPCGLCNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 394 PSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYA-SMRVLQHHEITHS 446
             +C VC   F    +   H R HT  KPY C  CN ++     +++H +  HS
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C  CG AF+H+ S   HQ IH+  KP   
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                   ++P+ C +C   F+   +L  H+RIH   KP   +
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF  +  L                               H
Sbjct: 2   SSGSS-GTGEKPYECSVCGKAFSHRQSL-----------------------------SVH 31

Query: 299 YRIHTDEKPFNCS 311
            RIH+ +KP   S
Sbjct: 32  QRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ CS+C K F  +  +  H RI
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI 34

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C  C  AF+H +S   HQ +H+  KP   
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                   ++P+ C +C   F+  ++L  H+R+H   KP   + 
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF     L                              QH
Sbjct: 2   SSGSS-GTGEKPYECDVCRKAFSHHASL-----------------------------TQH 31

Query: 299 YRIHTDEKPFNCS 311
            R+H+ EKP   S
Sbjct: 32  QRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-05
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C +C K F     +  H R+
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRV 34

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 17/41 (41%), Positives = 19/41 (46%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C  CG AF+ +SS   HQ IHT  KP   
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C  C   F+  S+L  H+ IH   KP   + 
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 17/73 (23%), Positives = 22/73 (30%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF  +  L                               H
Sbjct: 2   SSGSS-GTGEKPYECNQCGKAFSVRSSL-----------------------------TTH 31

Query: 299 YRIHTDEKPFNCS 311
             IHT +KP   S
Sbjct: 32  QAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C+ C K F  +  +  H  I
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI 34

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 51.8 bits (125), Expect = 4e-09
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY CK CG +F   S    HQ +H+  KP   
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P++C  C  +F   S LL H+R+H   KP   +
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P+ CK C  +F                          ++S L    ++H
Sbjct: 2   SSGSS-GTGEKPYNCKECGKSF-------------------------RWASCL----LKH 31

Query: 299 YRIHTDEKPFNCS 311
            R+H+ EKP   S
Sbjct: 32  QRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+NC  C K FR    +  H R+
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRV 34

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  C  +F + SS   HQ IHT  KP   
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C +C+ +F   S+L  H+RIH   KP   + 
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C +C K FR    +  H RI
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI 34

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 20/73 (27%), Positives = 26/73 (35%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C+ +F                          Y S    +L  H
Sbjct: 2   SSGSS-GTGEKPYKCDVCHKSF-------------------------RYGS----SLTVH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  QRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 5e-09
 Identities = 17/42 (40%), Positives = 19/42 (45%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C+ CG AF H S    HQ IHT  KP   
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P++C  C   F   S L  H+RIH   KP   +
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 19/73 (26%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P+ C+ C  AF     L                              +H
Sbjct: 2   SSGSS-GTGEKPYNCEECGKAFIHDSQL-----------------------------QEH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  QRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 8e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+NC  C K F     ++ H RI
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI 34

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG AF   SS   HQ +HT  +P   
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C+ C   F   S+   H+R+H   +P   + 
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF +                                  QH
Sbjct: 2   SSGSS-GTGEKPYKCMECGKAFGDNSSC-----------------------------TQH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT ++P   S
Sbjct: 32  QRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 12/32 (37%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ C  C K F        H R+
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL 34

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 6e-09
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   +PY C  CG AF  KSS   H+  HT  KP   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 7e-07
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                   RP+ C+ C   F   S+L+ H R H   KP   +
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 21/73 (28%), Positives = 24/73 (32%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TG+RP++C  C  AFK K  L                             I H
Sbjct: 2   SSGSS-GTGQRPYECIECGKAFKTKSSL-----------------------------ICH 31

Query: 299 YRIHTDEKPFNCS 311
            R HT EKP   S
Sbjct: 32  RRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T ++P+ C  C K F+ K  +  H R 
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRS 34

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 6e-09
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KP+ C+ CG +F+  S    HQ IHT   P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P  C  C  +F+  S L+ H+RIH    P   + 
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 18/73 (24%), Positives = 22/73 (30%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P +C+ C  +F     L                             I H
Sbjct: 2   SSGSS-GTGEKPHECRECGKSFSFNSQL-----------------------------IVH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT E P   S
Sbjct: 32  QRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 11/32 (34%), Positives = 12/32 (37%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP  C  C K F     +  H RI
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRI 34

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 51.4 bits (124), Expect = 6e-09
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KP+ C +CG +F  K +   HQ IHT  K    
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                    +PF C  C  +F     L+ H+RIH   K    +
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TG++PF+C +C  +F+ K +L                             + H
Sbjct: 2   SSGSS-GTGQKPFECTHCGKSFRAKGNL-----------------------------VTH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EK    S
Sbjct: 32  QRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.7 bits (104), Expect = 4e-06
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T +KPF C+ C K FR K ++  H RI
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI 34

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 7e-09
 Identities = 16/41 (39%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C  CG +F  KS    HQ IHT  KP   
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                   ++P+ C +C  +F + S L  H++IH   KP   +
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ CS+C K F +K  +  H +I
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI 34

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 18/73 (24%), Positives = 24/73 (32%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  +F +K  L                               H
Sbjct: 2   SSGSS-GTGEKPYECSICGKSFTKKSQL-----------------------------HVH 31

Query: 299 YRIHTDEKPFNCS 311
            +IHT EKP   S
Sbjct: 32  QQIHTGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 7e-09
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C  CG AF  +SS   HQ  H+  KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 10/43 (23%), Positives = 16/43 (37%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C  C   F   S+L  H+  H   KP   + 
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS 45

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C+ C K FR +  +  H   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQAT 34

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 16/73 (21%), Positives = 22/73 (30%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF+ +  L                               H
Sbjct: 2   SSGSS-GTGEKPYKCNECGKAFRARSSL-----------------------------AIH 31

Query: 299 YRIHTDEKPFNCS 311
              H+ EKP   S
Sbjct: 32  QATHSGEKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 7e-09
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG AF  +S+   HQ IHT  KP   
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F   S L+ H++IH   KP   +
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P+ C  C  AF                             +++ NLI+H
Sbjct: 2   SSGSS-GTGEKPYICAECGKAF-----------------------------TIRSNLIKH 31

Query: 299 YRIHTDEKPFNCS 311
            +IHT +KP   S
Sbjct: 32  QKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ C+ C K F  + ++  H +I
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKI 34

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 7e-09
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG AF  +S+   HQ IHT  KP   
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC 630
                  ++P+ C  C   F   S L  H++IH   KP   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-06
 Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF ++ +L                               H
Sbjct: 2   SSGSS-GTGEKPYRCAECGKAFTDRSNL-----------------------------FTH 31

Query: 299 YRIHTDEKPFNCS 311
            +IHT EKP   S
Sbjct: 32  QKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C+ C K F  + ++  H +I
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.0 bits (123), Expect = 8e-09
 Identities = 14/40 (35%), Positives = 16/40 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPY 174
                    KPY C  CG AF+ K S   H  +HT   P 
Sbjct: 1   GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.6 bits (101), Expect = 7e-06
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPY 628
                G ++P+ C  C   F+Q  +L+ H R+H    P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                  EKP+ C  C K F QK  +  H+R+
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV 33

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 30/70 (42%)

Query: 240 HIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHY 299
                  GE+P++C  C  AF +K  L                             I H 
Sbjct: 2   SSGS-SGGEKPYRCDQCGKAFSQKGSL-----------------------------IVHI 31

Query: 300 RIHTDEKPFN 309
           R+HT   P +
Sbjct: 32  RVHTGSGPSS 41

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 8e-09
 Identities = 16/41 (39%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C YCG AF   +    HQ IHT  KP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F   + L+ H+RIH   KP   +
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 19/73 (26%), Positives = 24/73 (32%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+P+ C YC  AF     L                             ++H
Sbjct: 2   SSGSS-GSGEKPYVCDYCGKAFGLSAEL-----------------------------VRH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  QRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 13/33 (39%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 + EKP+ C  C K F     +  H RI
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI 34

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 51.0 bits (123), Expect = 9e-09
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KP+ C  CG +F+  S    HQ IHT  KP   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 46.0 bits (110), Expect = 5e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++PF C  C  +F+  S L  H+RIH   KP   +
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 19/73 (26%), Positives = 22/73 (30%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+PF+C  C  +F     L                               H
Sbjct: 2   SSGSS-GTGEKPFECAECGKSFSISSQL-----------------------------ATH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  QRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKPF C+ C K F     +  H RI
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRI 34

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 9e-09
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG +F  KS    HQ IHT   P   
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC 630
                  ++P+ C  C  +F + S L  H+RIH    P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  +F +K  L                               H
Sbjct: 2   SSGSS-GTGEKPYECSDCGKSFIKKSQL-----------------------------HVH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT E P   S
Sbjct: 32  QRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ CS C K F +K  +  H RI
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI 34

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 9e-09
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        K + C  CG AF  KS+   HQ IHT  KP   
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 8e-07
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                   + F C  C   F + STL  H++IH   KP   + 
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 18/73 (24%), Positives = 21/73 (28%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TG + F+C  C  AF  K  L                               H
Sbjct: 2   SSGSS-GTGGKHFECTECGKAFTRKSTL-----------------------------SMH 31

Query: 299 YRIHTDEKPFNCS 311
            +IHT EKP   S
Sbjct: 32  QKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T  K F C+ C K F +K  +  H +I
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKI 34

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 9e-09
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        +PY C  CG AF  +S+   HQ IHT  KP   
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  +RP+ C +C   F   S L+ H++IH   KP   + 
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 5e-06
 Identities = 20/73 (27%), Positives = 26/73 (35%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGERP+ C  C  AF ++ +L                             I+H
Sbjct: 2   SSGSS-GTGERPYICTVCGKAFTDRSNL-----------------------------IKH 31

Query: 299 YRIHTDEKPFNCS 311
            +IHT EKP   S
Sbjct: 32  QKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-06
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T E+P+ C++C K F  + ++  H +I
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKI 34

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 9e-09
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +       +KPY C  CG AF+  SS   HQ IHT  KP   
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                   +P+ C  C   F+  S+L  H+ IH   KP   + 
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 17/73 (23%), Positives = 19/73 (26%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TG +P+ C  C  AF     L                               H
Sbjct: 2   SSGSS-GTGVKPYMCNECGKAFSVYSSL-----------------------------TTH 31

Query: 299 YRIHTDEKPFNCS 311
             IHT EKP   S
Sbjct: 32  QVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 7e-05
 Identities = 9/33 (27%), Positives = 12/33 (36%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T  KP+ C+ C K F     +  H  I
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI 34

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.9 bits (123), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  C  AF  KS+   HQ  HT       
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.2 bits (108), Expect = 9e-07
 Identities = 9/42 (21%), Positives = 14/42 (33%)

Query: 589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC 630
                   ++P+ C  C   F   S L+ H+R H        
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ C+ C+K F  K ++  H R 
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRT 34

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 16/72 (22%), Positives = 22/72 (30%), Gaps = 30/72 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF  K +L                             + H
Sbjct: 2   SSGSS-GTGEKPYECNECQKAFNTKSNL-----------------------------MVH 31

Query: 299 YRIHTDEKPFNC 310
            R HT E   + 
Sbjct: 32  QRTHTGESGPSS 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG AF+ KS    H   H+  KP   
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F+  S L+ H R H   KP   +
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 18/73 (24%), Positives = 22/73 (30%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S       GE+P+ C  C  AF  K +L                             I H
Sbjct: 2   SSGSS-GAGEKPYGCSECGKAFSSKSYL-----------------------------IIH 31

Query: 299 YRIHTDEKPFNCS 311
            R H+ EKP   S
Sbjct: 32  MRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                   EKP+ CS C K F  K ++  H+R 
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT 34

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        K + C  C   F   SS   HQ IHT  KP   
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 9e-07
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                   + F C  C  TF Q S+L  H+RIH   KP   +
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                  +K F C+ C+K F Q   +  H RI
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI 34

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 16/73 (21%), Positives = 20/73 (27%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S       G++ F+C  C   F +   L                               H
Sbjct: 2   SSGSS-GAGKKLFKCNECKKTFTQSSSL-----------------------------TVH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  QRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG AFA K++   HQ IHT  KP   
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   FAQ + L  H+RIH   KP   +
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C  C K F QK ++  H RI
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI 34

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-06
 Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF +K +L                              QH
Sbjct: 2   SSGSS-GTGEKPYRCGECGKAFAQKANL-----------------------------TQH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  QRIHTGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 14/41 (34%), Positives = 16/41 (39%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   + Y C  CG AF  KS+   HQ IH   KP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-07
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  +R + C  C   F Q STL  H+RIH   KP   + 
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T E+ + CS C K F QK  +  H RI
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRI 34

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 19/73 (26%), Positives = 22/73 (30%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGER ++C  C  AF +K  L                               H
Sbjct: 2   SSGSS-GTGERHYECSECGKAFIQKSTL-----------------------------SMH 31

Query: 299 YRIHTDEKPFNCS 311
            RIH  EKP   S
Sbjct: 32  QRIHRGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG  F+ KS   AHQ  HT  KP   
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                   ++P+ C  C  TF+Q S L  H+R H   KP   +
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                + EKP+ C+ C K F QK  +  H R 
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRT 34

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 17/73 (23%), Positives = 21/73 (28%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+P+ C  C   F +K  L                               H
Sbjct: 2   SSGSS-GSGEKPYGCNECGKTFSQKSIL-----------------------------SAH 31

Query: 299 YRIHTDEKPFNCS 311
            R HT EKP   S
Sbjct: 32  QRTHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 16/41 (39%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C  CG AF+  S    HQ IHT  KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F+Q S L  H+RIH   KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 19/73 (26%), Positives = 24/73 (32%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF +   L                              +H
Sbjct: 2   SSGSS-GTGEKPYKCNECGKAFSQTSKL-----------------------------ARH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  QRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ C+ C K F Q   +  H RI
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRI 34

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 16/41 (39%), Positives = 18/41 (43%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   + Y C  CG AFA KS+   HQ IHT  KP   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 8e-07
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  +R + C  C   FA+ STL+ H+RIH   KP   +
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGER ++C  C  AF  K  L                             I H
Sbjct: 2   SSGSS-GTGERHYECSECGKAFARKSTL-----------------------------IMH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  QRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T E+ + CS C K F +K  +  H RI
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRI 34

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY CK CG AF+  +    HQ +HT  KP   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F+Q + L+ H+R+H   KP   +
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++CK C  AF +  HL                             IQH
Sbjct: 2   SSGSS-GTGEKPYECKECGKAFSQTTHL-----------------------------IQH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT EKP   S
Sbjct: 32  QRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C  C K F Q  H+  H R+
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRV 34

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY CK C  AF  K+    HQ  HT  KP   
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C +C+  F Q + L  H++ H   KP   +
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++CK C+ AF +K HL                              QH
Sbjct: 2   SSGSS-GTGEKPYECKVCSKAFTQKAHL-----------------------------AQH 31

Query: 299 YRIHTDEKPFNCS 311
            + HT EKP   S
Sbjct: 32  QKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C +C K F QK H+  H + 
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT 34

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C+ CG  +  K + D HQ +HT  +P   
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 7/44 (15%), Positives = 16/44 (36%)

Query: 589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                   ++P+ C  C   +     L  H+++H   +P   + 
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS 45

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C+ C   +  K +L                               H
Sbjct: 2   SSGSS-GTGEKPYKCEKCGKGYNSKFNL-----------------------------DMH 31

Query: 299 YRIHTDEKPFNCS 311
            ++HT E+P   S
Sbjct: 32  QKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ C  C K +  K ++  H ++
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV 34

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        K Y CK CG +F+       H+ +H+  KP   
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++ ++C  C  +F++   LL HER+H   KP   +
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+ + CK C  +F     L                             ++H
Sbjct: 2   SSGSS-GTGEKLYNCKECGKSFSRAPCL-----------------------------LKH 31

Query: 299 YRIHTDEKPFNCS 311
            R+H+ EKP   S
Sbjct: 32  ERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EK +NC  C K F +   +  H R+
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERL 34

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCG 180
           +        KP+ C+ CG  F   S   +HQ  H+  KP    + G
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP-SSG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++PF C  C   F   S   +H+R H   KP   +
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 15/73 (20%), Positives = 20/73 (27%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+PF+C+ C   F                                     H
Sbjct: 2   SSGSS-GSGEKPFKCEECGKGFYTNSQC-----------------------------YSH 31

Query: 299 YRIHTDEKPFNCS 311
            R H+ EKP   S
Sbjct: 32  QRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 10/33 (30%), Positives = 12/33 (36%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 + EKPF C  C K F       +H R 
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS 34

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +       +KPY C  CG AF  KS    H   HT       
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 9e-06
 Identities = 9/41 (21%), Positives = 12/41 (29%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC 630
                   +P+ C  C   F   S L+ H R H        
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T  KP+ C+ C K FR K ++  H R 
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT 34

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 16/72 (22%), Positives = 21/72 (29%), Gaps = 30/72 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TG +P+ C  C  AF+ K +L                             I H
Sbjct: 2   SSGSS-GTGMKPYVCNECGKAFRSKSYL-----------------------------IIH 31

Query: 299 YRIHTDEKPFNC 310
            R HT E   + 
Sbjct: 32  TRTHTGESGPSS 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 16/41 (39%), Positives = 16/41 (39%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C  CG  F H S    HQ IHT  KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 9e-07
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C  C   F   S L  H+RIH   KP   + 
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C+ C K FR   ++  H RI
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI 34

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-06
 Identities = 18/73 (24%), Positives = 24/73 (32%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C   F+   +L                              +H
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFRHNSYL-----------------------------SRH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  QRIHTGEKPSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C+ CG  +  + + D HQ +H   K    
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C  C   + +   L  H+R+H   K    + 
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 15/73 (20%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      + E+P++C+ C                     K +N  +         NL  H
Sbjct: 2   SSGSS-GSVEKPYKCEDCG--------------------KGYNRRL---------NLDMH 31

Query: 299 YRIHTDEKPFNCS 311
            R+H  EK    S
Sbjct: 32  QRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 + EKP+ C  C K + +++++  H R+
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV 34

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KP+ C  CG AF+     + H+ IHT  KP   
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++PF C+ C   F+    L  H RIH   KP   +
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-06
 Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+PF C  C  AF +   L                              QH
Sbjct: 2   SSGSS-GTGEKPFDCIDCGKAFSDHIGL-----------------------------NQH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  RRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKPF+C  C K F   I +  H RI
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI 34

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG +F  KS    HQ  HT  +    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C  C  +F   S L  H++ H   +    + 
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ CS C K F  K  ++ H + 
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC 34

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 15/73 (20%), Positives = 21/73 (28%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  +F  K  L                               H
Sbjct: 2   SSGSS-GTGEKPYKCSDCGKSFTWKSRL-----------------------------RIH 31

Query: 299 YRIHTDEKPFNCS 311
            + HT E+    S
Sbjct: 32  QKCHTGERHSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG AF+  S    HQ +HT  KP   
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-07
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                    +P+ C  C   F+Q S L  H+R+H   KP   +
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TG +P+QC  C  AF +   L                              +H
Sbjct: 2   SSGSS-GTGGKPYQCNECGKAFSQTSKL-----------------------------ARH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT EKP   S
Sbjct: 32  QRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T  KP+ C+ C K F Q   +  H R+
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRV 34

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 14/41 (34%), Positives = 15/41 (36%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C  CG AF  KS    HQ  HT  +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 8/42 (19%), Positives = 16/42 (38%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F + S L  H++ H   +    +
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ CS C K F +K  +  H + 
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS 34

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 16/73 (21%), Positives = 21/73 (28%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF  K  L                               H
Sbjct: 2   SSGSS-GTGEKPYKCSDCGKAFTRKSGL-----------------------------HIH 31

Query: 299 YRIHTDEKPFNCS 311
            + HT E+    S
Sbjct: 32  QQSHTGERHSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C+ CG  F  +     H  +HT  KP   
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 9/42 (21%), Positives = 14/42 (33%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F     L  H  +H   KP   +
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C+ C                     K F C           +L  H
Sbjct: 2   SSGSS-GTGEKPYKCEECG--------------------KGFICRR---------DLYTH 31

Query: 299 YRIHTDEKPFNCS 311
           + +HT EKP   S
Sbjct: 32  HMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 8e-05
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ C  C K F  +  +  H  +
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMV 34

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG AF   S+   HQ IHT  KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C  C   F   S L  H+ IH   KP   + 
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C+ C K FR   ++  H  I
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI 34

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C  AF+   +L                               H
Sbjct: 2   SSGSS-GTGEKPYKCNECGKAFRAHSNL-----------------------------TTH 31

Query: 299 YRIHTDEKPFNCS 311
             IHT EKP   S
Sbjct: 32  QVIHTGEKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCG 180
           +       +KPY C  C   F+ KS    HQ  HT +KP    + G
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP-SSG 46

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                   +P+ C  C  TF+  S L+ H+R H   KP   +
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 19/73 (26%), Positives = 21/73 (28%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TG +P+ C  C   F                             SLK  LI H
Sbjct: 2   SSGSS-GTGVKPYGCSQCAKTF-----------------------------SLKSQLIVH 31

Query: 299 YRIHTDEKPFNCS 311
            R HT  KP   S
Sbjct: 32  QRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T  KP+ CS C K F  K  +  H R 
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS 34

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KP+ C  C  AF  KS+   HQ  HT  KP   
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+PF+C  C  AF                             + K NLI H
Sbjct: 2   SSGSS-GTGEKPFECSECQKAF-----------------------------NTKSNLIVH 31

Query: 299 YRIHTDEKPFNCS 311
            R HT EKP   S
Sbjct: 32  QRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++PF C  C   F   S L+ H+R H   KP   +
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKPF CS C+K F  K ++  H R 
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRT 34

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +         P+ C  CG  F HK++   HQ IHT  +P   
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE PF C  C   F                             + K NLI H
Sbjct: 2   SSGSS-GTGENPFICSECGKVF-----------------------------THKTNLIIH 31

Query: 299 YRIHTDEKPFNCS 311
            +IHT E+P   S
Sbjct: 32  QKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  + PF C  C   F   + L+ H++IH   +P   +
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T E PF CS C K F  K ++  H +I
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKI 34

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG AF  KS    H+  H  +     
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC 630
                  ++P+ C  C   F   S L+ HER H        
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                + EKP+ C+ C K F  K  +  H R 
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERT 34

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 14/72 (19%), Positives = 19/72 (26%), Gaps = 30/72 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+P++C  C  AF                               K  LI H
Sbjct: 2   SSGSS-GSGEKPYECNECGKAF-----------------------------IWKSLLIVH 31

Query: 299 YRIHTDEKPFNC 310
            R H      + 
Sbjct: 32  ERTHAGVSGPSS 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG  +  +   D HQ +HT  K    
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C+ C   + +   L  H+R+H   K    + 
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 45

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 15/73 (20%), Positives = 22/73 (30%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+P++C  C   +K +  L                               H
Sbjct: 2   SSGSS-GSGEKPYKCVECGKGYKRRLDL-----------------------------DFH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT EK    S
Sbjct: 32  QRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                + EKP+ C  C K +++++ +  H R+
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV 34

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-08
 Identities = 13/41 (31%), Positives = 15/41 (36%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                    PY C  CG AF+ K    +HQ  H   KP   
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  + P+ C  C   F++   L++H+R H   KP   +
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-06
 Identities = 19/73 (26%), Positives = 22/73 (30%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE P++C  C  AF  K+ L                             I H
Sbjct: 2   SSGSS-GTGENPYECHECGKAFSRKYQL-----------------------------ISH 31

Query: 299 YRIHTDEKPFNCS 311
            R H  EKP   S
Sbjct: 32  QRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T E P+ C  C K F +K  + +H R 
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRT 34

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-08
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG  F   S    HQ IHT +KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F Q S L NH+RIH   KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-06
 Identities = 18/73 (24%), Positives = 22/73 (30%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C   F +  HL                               H
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFTQNSHL-----------------------------ANH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT  KP   S
Sbjct: 32  QRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ C+ C K F Q  H+ NH RI
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRI 34

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 49.4 bits (119), Expect = 3e-08
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KP+ C  CG  F+ +S+ + H  +HT  KP   
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++PF C+ C   F++ S L  H ++H   KP   +
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+PF+C  C   F  +  L                               H
Sbjct: 2   SSGSS-GTGEKPFKCVECGKGFSRRSAL-----------------------------NVH 31

Query: 299 YRIHTDEKPFNCS 311
           +++HT EKP   S
Sbjct: 32  HKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKPF C  C K F ++  +  H ++
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKL 34

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 14/41 (34%), Positives = 15/41 (36%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   K Y C  CG  F+  S    HQ IHT  KP   
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++ + C  C   F++ S L  H++IH   KP   + 
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EK + C+ C K F +   +  H +I
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI 34

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 17/73 (23%), Positives = 21/73 (28%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+ ++C  C   F     L                              QH
Sbjct: 2   SSGSS-GTGEKRYKCNECGKVFSRNSQL-----------------------------SQH 31

Query: 299 YRIHTDEKPFNCS 311
            +IHT EKP   S
Sbjct: 32  QKIHTGEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 4e-08
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KP+ C  CG +F  +S  + H  +HT  KP   
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++PF C +C  +F   S L  H  +H   KP   +
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKPF C +C K F  +  +  H  +
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV 34

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+PF+C  C  +F  +  L                              +H
Sbjct: 2   SSGSS-GTGEKPFKCDICGKSFCGRSRL-----------------------------NRH 31

Query: 299 YRIHTDEKPFNCS 311
             +HT EKP   S
Sbjct: 32  SMVHTAEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 4e-08
 Identities = 14/42 (33%), Positives = 15/42 (35%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG  F   S    H  IHT  KP   
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F Q S L NH RIH   KP   +
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 18/73 (24%), Positives = 24/73 (32%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+P++C  C   F +  HL                               H
Sbjct: 2   SSGSS-GSGEKPYKCNECGKVFTQNSHL-----------------------------TNH 31

Query: 299 YRIHTDEKPFNCS 311
           +RIHT EKP   S
Sbjct: 32  WRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                + EKP+ C+ C K F Q  H+ NH RI
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI 34

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 5e-08
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY+C  CG AF   +  + H  +HT       
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 9/42 (21%), Positives = 16/42 (38%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+SC +C   F   + L  H R+H        +
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP++C++C K F    H+  HLR+
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV 34

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 18/73 (24%), Positives = 21/73 (28%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P+ C  C  AF    HL                              QH
Sbjct: 2   SSGSS-GTGEKPYSCNVCGKAFVLSAHL-----------------------------NQH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT E     S
Sbjct: 32  LRVHTQETLSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 5e-08
 Identities = 15/42 (35%), Positives = 16/42 (38%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG  F   S    HQ IHT  KP   
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.5 bits (109), Expect = 8e-07
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C  C   F + S L  H+ IH   KP   + 
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 5e-06
 Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C   F+   HL                              +H
Sbjct: 2   SSGSS-GTGEKPYKCHECGKVFRRNSHL-----------------------------ARH 31

Query: 299 YRIHTDEKPFNCS 311
             IHT EKP   S
Sbjct: 32  QLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C  C K FR+  H+  H  I
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLI 34

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 5e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C+ CG AF   S    H ++H+  +P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C +C   F   S L+ H  +H   +P   +
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C+ C  AF+   HL                             +QH
Sbjct: 2   SSGSS-GTGEKPYKCQVCGKAFRVSSHL-----------------------------VQH 31

Query: 299 YRIHTDEKPFNCS 311
           + +H+ E+P   S
Sbjct: 32  HSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C +C K FR   H+  H  +
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV 34

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 5e-08
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KP+ C+ CG  F   S   +HQ +HT  KP   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++PF C  C   F Q S L +H+R+H   KP   + 
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                + EKPF C  C K+F Q   + +H R+
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV 34

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+PF+C+ C   F +   L                               H
Sbjct: 2   SSGSS-GSGEKPFKCEECGKRFTQNSQL-----------------------------HSH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT EKP   S
Sbjct: 32  QRVHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 5e-08
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG +F  KS  + H+ IHT  KP   
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C  +F Q S L  H RIH   KP   +
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-06
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKP+ C+ C K F QK H+  H RI
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRI 34

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-06
 Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P+ C  C  +F +K HL                              +H
Sbjct: 2   SSGSS-GTGEKPYICNECGKSFIQKSHL-----------------------------NRH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  RRIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 5e-08
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG  F   S    H+ IHT  KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F Q S L+ H  IH   KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 18/73 (24%), Positives = 24/73 (32%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C   F +  HL                             ++H
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFTQNSHL-----------------------------VRH 31

Query: 299 YRIHTDEKPFNCS 311
             IHT EKP   S
Sbjct: 32  RGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ C+ C K F Q  H+  H  I
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI 34

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 5e-08
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KP+ CK CG AF       +H  IHT  KP   
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++PF C  C   F Q   L +H RIH   KP   +
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+PF+CK C  AF++  HL                               H
Sbjct: 2   SSGSS-GSGEKPFKCKECGKAFRQNIHL-----------------------------ASH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  LRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 16/33 (48%), Positives = 19/33 (57%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 + EKPF C  C K FRQ IH+ +HLRI
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRI 34

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 5e-08
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG  F   S    H+ IHT  KP   
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                   +P+ C  C   F Q S L  H  IH   KP   +
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TG++P++C  C   F +  HL                              +H
Sbjct: 2   SSGSS-GTGKKPYKCNECGKVFTQNSHL-----------------------------ARH 31

Query: 299 YRIHTDEKPFNCS 311
             IHT EKP   S
Sbjct: 32  RGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T +KP+ C+ C K F Q  H+  H  I
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGI 34

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 6e-08
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KPY C  CG AF   +  + H+ IHT  +P   
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 8e-07
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++P+ C  C   F + + L  H RIH  ++P   + 
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+P++C  C  AF    HL                              +H
Sbjct: 2   SSGSS-GSGEKPYKCSECGKAFHRHTHL-----------------------------NEH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT  +P   S
Sbjct: 32  RRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 + EKP+ CS C K F +  H+  H RI
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI 34

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 6e-08
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG  F   S    H+ IHT  KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F Q S L  H  IH   KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C   F +  HL                              +H
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFTQNSHL-----------------------------ARH 31

Query: 299 YRIHTDEKPFNCS 311
             IHT EKP   S
Sbjct: 32  RGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ C+ C K F Q  H+  H  I
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGI 34

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 6e-08
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                +  K Y C  CG  F+  S    HQ +HT  KP   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                   ++ + C +C   F+Q S L  H+R+H   KP   +
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 16/73 (21%), Positives = 21/73 (28%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S       GE+ ++C  C   F +  HL                               H
Sbjct: 2   SSGSS-GMGEKCYKCDVCGKEFSQSSHL-----------------------------QTH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT EKP   S
Sbjct: 32  QRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                  EK + C +C K+F Q  H++ H R+
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV 34

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 8e-08
 Identities = 83/609 (13%), Positives = 162/609 (26%), Gaps = 190/609 (31%)

Query: 264 HHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHV 323
           HH   H++   G+ + +             +++  +     E  F        F  K  V
Sbjct: 1   HHHHHHMDFETGEHQ-YQYK----------DILSVF-----EDAF-----VDNFDCK-DV 38

Query: 324 KNHLRIIHNMNFCDHCFKFVGPEQELNIFRHCEVCDKSNNSYLLCWKCGFKTSVLNELKA 383
           ++  + I +    DH                    D  + +  L W        L     
Sbjct: 39  QDMPKSILSKEEIDHIIM---------------SKDAVSGTLRLFW-------TLLS--- 73

Query: 384 HIKSHHFPKQPSICAV-CGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHE 442
                   KQ  +      +  + NY + +         P + +    S  +   ++  +
Sbjct: 74  --------KQEEMVQKFVEEVLRINYKFLM--------SPIKTEQRQPSMMTRMYIEQRD 117

Query: 443 ITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMA-------HNQVLQ 495
             ++    F      KY          +++     +P   +    +           V  
Sbjct: 118 RLYNDNQVFA-----KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL 172

Query: 496 RHMTLHFTQNKHPCN-------RCNASFSSMVQLS--CHQIRAHGKQKQRFMCHRCGIIN 546
            +      Q K            CN+  + +  L    +QI  +   +           N
Sbjct: 173 SYKV----QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS------N 222

Query: 547 LKRKYHVYHLKYECGYTRTLPPELRRQFKH----------DIVYMDSKT--NFNIHMRIH 594
           +K + H            ++  ELRR  K             V  ++K    FN+  +I 
Sbjct: 223 IKLRIH------------SIQAELRRLLKSKPYENCLLVLLNVQ-NAKAWNAFNLSCKI- 268

Query: 595 GKDRPFSCLL----CNNTFAQLSTLLNHERIHDNHKPY----------KCTKCNYS---A 637
                   LL       T    +    H  +  +              K   C       
Sbjct: 269 --------LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 638 RVLS-NKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQ 696
            VL+ N      I           +N     K  +C +    I  S     PA+ +    
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDN----WKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376

Query: 697 SFALFSN------------------------LNAHYNKHLKVRRFSCTNCSLNFTYLSNL 732
             ++F                          +N  +   L  ++   +  S+   YL   
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436

Query: 733 IR-------HRR-IKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCN 784
           ++       HR  + H      +  +     Y+D+  Y +H+  H+ +   + +R     
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY-SHIGHHL-KNIEHPER----M 490

Query: 785 ATFRIKKFL 793
             FR   FL
Sbjct: 491 TLFR-MVFL 498

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 4e-07
 Identities = 39/257 (15%), Positives = 74/257 (28%), Gaps = 73/257 (28%)

Query: 567 PPELRRQFKHDIVYMDSKTNFNIHM----RIHGKDRPFSCLLCNNTFAQLSTLLNHE--- 619
           P E R+ F    V+     + +I       I         ++  N   + S +       
Sbjct: 368 PAEYRKMFDRLSVFPP---SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424

Query: 620 --RIHDNHKPYKCTKCNYSA--RVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRR 675
              I   +   K    N  A  R + +     + +  D +   +++       FYS +  
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ-----YFYSHIGH 479

Query: 676 H-RKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIR 734
           H + I H              +   LF  +   +               L+F +L   IR
Sbjct: 480 HLKNIEHP-------------ERMTLFRMV---F---------------LDFRFLEQKIR 508

Query: 735 HRRIKHSQHEGKYVCNYCGKSY---IDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKK 791
           H              N  G         + Y  ++  +  +   Y +  +       I  
Sbjct: 509 H---------DSTAWNASGSILNTLQQLKFYKPYICDNDPK---YERLVNA------ILD 550

Query: 792 FLTRHMKTHLIQYRCTR 808
           FL +  + +LI  + T 
Sbjct: 551 FLPKI-EENLICSKYTD 566

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 2e-04
 Identities = 68/468 (14%), Positives = 133/468 (28%), Gaps = 124/468 (26%)

Query: 31  SKLTTLKRH--VGIH-MKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKKIYY----KCD 83
             L  L+    V I  +       G  G+ ++ L    ++  Q     K I++     C+
Sbjct: 142 QALLELRPAKNVLIDGVL------G-SGKTWVALDVCLSYKVQCKMDFK-IFWLNLKNCN 193

Query: 84  KCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSFCAYRGRYRYH-FKAHLRIHLN 142
                 +   K     + + T  S++                  + R H  +A LR  L 
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSS--------------NIKLRIHSIQAELRRLLK 239

Query: 143 IKPYA-C---------KYCGNAFAHKS-----SRDAHQNIHTDLKPYLCLTCGQSFRTFN 187
            KPY  C             NAF         +R     +   L          +    +
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFK--QVTDFLS-------AATTTHIS 290

Query: 188 LMKRHNLCDHQDVRNYLCNFCNKTYKD--RKTLDNH-----ILG-----HVD-IKPYKQL 234
           L          +V++ L  + +   +D  R+ L  +     I+       +     +K +
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHV 350

Query: 235 SN--LQSHIRISHTGERP--FQCKYCNYA-FKEKHHLETHV------NLHLGKTKSFNCN 283
           +   L + I  S     P  ++  +   + F    H+ T +      ++           
Sbjct: 351 NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410

Query: 284 VCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKN----HLRIIHNMNF---- 335
           +  YS   K        I         S+       K+ ++N    H  I+ + N     
Sbjct: 411 LHKYSLVEKQPKESTISIP--------SI---YLELKVKLENEYALHRSIVDHYNIPKTF 459

Query: 336 -CDHC---------FKFVG-------PEQELNIFRHCEVCD------KSNNSYLLCWKCG 372
             D           +  +G         + + +FR   + D      K  +        G
Sbjct: 460 DSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL-DFRFLEQKIRHDSTAWNASG 518

Query: 373 FKTSVLNELKAHIKSHHFPKQPSICAVCGD--TFKTNYNYFVHMRRHT 418
              + L +LK + K +     P    +      F       +   ++T
Sbjct: 519 SILNTLQQLKFY-KPYICDNDPKYERLVNAILDFLPKIEENLICSKYT 565

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 8e-08
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KP+ C+ CG  F   S   +HQ +HT  KP   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++PF C  C   F Q S L +H+R+H   KP   +
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 + EKPF C  C K+F Q  H+ +H R+
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV 34

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 19/73 (26%), Positives = 24/73 (32%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+PFQC+ C   F +  HL                               H
Sbjct: 2   SSGSS-GSGEKPFQCEECGKRFTQNSHL-----------------------------HSH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT EKP   S
Sbjct: 32  QRVHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   +P+ C  CG +F   +    HQ IHT  KP   
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  +RP  C  C  +F Q + L+ H+RIH   KP   + 
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGERP +C  C  +F +  HL                             IQH
Sbjct: 2   SSGSS-GTGERPHKCNECGKSFIQSAHL-----------------------------IQH 31

Query: 299 YRIHTDEKPFNCS 311
            RIHT EKP   S
Sbjct: 32  QRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T E+P  C+ C K F Q  H+  H RI
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI 34

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG  F   S    H+ +HT  KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C   F Q S L  H R+H   KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP+ C+ C K F Q  H+  H R+
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRV 34

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+P++C  C   F +  HL                              +H
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFTQNSHL-----------------------------ARH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT  KP   S
Sbjct: 32  RRVHTGGKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +     +  K + C+ C   F+  SS   HQN+H   KP   
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++ + C  C+  F+Q S+L  H+ +H   KP   + 
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 7/32 (21%), Positives = 12/32 (37%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                  EK + C  C+  F Q   ++ H  +
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNV 34

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 14/73 (19%), Positives = 21/73 (28%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S    S  GE+ ++C+ C+  F +   L                               H
Sbjct: 2   SSGS-SGMGEKTWKCRECDMCFSQASSL-----------------------------RLH 31

Query: 299 YRIHTDEKPFNCS 311
             +H  EKP   S
Sbjct: 32  QNVHVGEKPSGPS 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQ-NIHTDLKPYLC 176
           +        KPY C  CG AF   +S   H    HT  KP   
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIH 331
                 T +KP+ C  C K F Q   +  H R  H
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHER-IHDNHKPYKCT 631
                   +P+ C+ C   F Q ++L+ H R  H   KP   +
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.9 bits (94), Expect = 7e-05
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 31/74 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TG++P++C  C  AF +   L                             I+H
Sbjct: 2   SSGSS-GTGKKPYECIECGKAFIQNTSL-----------------------------IRH 31

Query: 299 YR-IHTDEKPFNCS 311
           +R  HT EKP   S
Sbjct: 32  WRYYHTGEKPSGPS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   KP+ C  CG ++  +     HQ +HT  KP   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-07
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                  ++PF C  C  ++ Q   L  H+R+H   KP   + 
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-06
 Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+PF+C  C  ++ ++ HL                              QH
Sbjct: 2   SSGSS-GTGEKPFKCGECGKSYNQRVHL-----------------------------TQH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT EKP   S
Sbjct: 32  QRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKPF C  C K + Q++H+  H R+
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV 34

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 34/98 (34%)

Query: 234 LSNLQSHIRISHTGERPFQCKY--CNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSL 291
           ++NL +++       RP+ C    C+  F     L  H                      
Sbjct: 6   MNNLLNYVV---PKMRPYACPVESCDRRFSRSDELTRH---------------------- 40

Query: 292 KWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                   RIHT +KPF C +C + F +  H+  H+R 
Sbjct: 41  -------IRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 233 QLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLH 273
           +   L  HIRI HTG++PFQC+ C   F    HL TH+  H
Sbjct: 33  RSDELTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 13 HESQDERTYHCPL--CSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQ 70
          +     R Y CP+  C ++FS+   L RH+ IH   +P +C  C + F     L  HIR 
Sbjct: 12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR- 70

Query: 71 RHT 73
           HT
Sbjct: 71 THT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 413 HMRRHTGFKPYQC--KTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHM 470
                   +PY C  ++C+  ++    L  H   H+    F C  C + F++ +++  H+
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

Query: 471 KRH 473
           + H
Sbjct: 70  RTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 588 NIHMRIHGKDRPFSC--LLCNNTFAQLSTLLNHERIHDNHKPYKCTKCN 634
           N+   +  K RP++C    C+  F++   L  H RIH   KP++C  C 
Sbjct: 8   NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICM 56

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 13/76 (17%), Positives = 22/76 (28%), Gaps = 28/76 (36%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S +  +P+ C+ C   F    HL  H+                             ++HT
Sbjct: 6   SGSVGKPYICQSCGKGFSRPDHLNGHIK----------------------------QVHT 37

Query: 304 DEKPFNCSLCEKQFRQ 319
            E+P  C +       
Sbjct: 38  SERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAH-QNIHTDLKPYLCLTCGQSFRT 185
           +        KPY C+ CG  F+     + H + +HT  +P+ C        +
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIH 331
                +  KP+ C  C K F +  H+  H++ +H
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 229 KPYKQLSNLQSHIRISHTGERPFQCKYCNYAF 260
           K + +  +L  HI+  HT ERP +C+      
Sbjct: 20  KGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHE-RIHDNHKPYKCTKC 633
                   +P+ C  C   F++   L  H  ++H + +P+KC   
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 394 PSICAVCGDTFKTNYNYFVHMRR-HTGFKPYQCKTCNASYAS 434
           P IC  CG  F    +   H+++ HT  +P++C+   +  +S
Sbjct: 12  PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 10/42 (23%), Positives = 14/42 (33%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +         PY C  CG  F+ K    +HQ  H+       
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 12/67 (17%), Positives = 19/67 (28%), Gaps = 29/67 (43%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S TGE P++C  C   F  K  L                             + H + H+
Sbjct: 6   SGTGENPYECCECGKVFSRKDQL-----------------------------VSHQKTHS 36

Query: 304 DEKPFNC 310
            +   + 
Sbjct: 37  GQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC 630
                  + P+ C  C   F++   L++H++ H        
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T E P+ C  C K F +K  + +H + 
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKT 34

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 14/42 (33%), Positives = 15/42 (35%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KP  C  CG AF  KS    HQ  H D K    
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 18/68 (26%), Positives = 21/68 (30%), Gaps = 29/68 (42%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S TGE+P +C  C  AF  K  L                             I H R H 
Sbjct: 6   SGTGEKPCKCTECGKAFCWKSQL-----------------------------IMHQRTHV 36

Query: 304 DEKPFNCS 311
           D+K    S
Sbjct: 37  DDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P  C  C   F   S L+ H+R H + K    +
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 9e-04
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                T EKP  C+ C K F  K  +  H R 
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT 34

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 48.4 bits (115), Expect = 2e-07
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 245 HTGERPFQCKYCNYAFKEKHHLETHVN-LHLGKTKS-------FNCNVCNYSSSLKWNLI 296
              +     K C+  F   H L THV   H+G  +          C     S   K+ L+
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 297 QHYRIHTDEKPFNCS 311
            H R+HT EK    S
Sbjct: 80  NHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.3 bits (107), Expect = 3e-06
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 12/87 (13%)

Query: 167 IHTDLKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYLCNFCNKTYKDRKTLDNHILGHV 226
           I          +C ++F T + +  H   +H        + C      R+          
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREG--------- 69

Query: 227 DIKPYKQLSNLQSHIRISHTGERPFQC 253
             K +K    L +HIR+ HTGE+    
Sbjct: 70  --KSFKAKYKLVNHIRV-HTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.5 bits (97), Expect = 8e-05
 Identities = 17/66 (25%), Positives = 22/66 (33%), Gaps = 8/66 (12%)

Query: 368 CWKCGFKTSVLNELKAHIKSHHFPKQPSI--------CAVCGDTFKTNYNYFVHMRRHTG 419
              C    S ++EL  H+   H               C   G +FK  Y    H+R HTG
Sbjct: 28  KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87

Query: 420 FKPYQC 425
            K    
Sbjct: 88  EKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 6/70 (8%)

Query: 42  IHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHT--SNKKIYY----KCDKCNKTYKSKYKF 95
           I           C + F  +  L  H+   H     +  +     +C +  K++K+KYK 
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 96  ERHKNTHVTE 105
             H   H  E
Sbjct: 79  VNHIRVHTGE 88

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY C  CG +F+       H   HT  KP   
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-06
 Identities = 17/68 (25%), Positives = 22/68 (32%), Gaps = 29/68 (42%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S  GE+P+QC  C  +F   + L                              QH+  HT
Sbjct: 6   SGEGEKPYQCSECGKSFSGSYRL-----------------------------TQHWITHT 36

Query: 304 DEKPFNCS 311
            EKP   S
Sbjct: 37  REKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 9/42 (21%), Positives = 15/42 (35%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++P+ C  C  +F+    L  H   H   KP   +
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 9/33 (27%), Positives = 11/33 (33%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                   EKP+ CS C K F     +  H   
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWIT 34

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +       + PY C  C  +F+ K     HQ +HT  KP   
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 9e-06
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK 632
                    P+ C  C  +F+    LL H+R+H   KP   + 
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 45

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 17/73 (23%), Positives = 22/73 (30%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S    S  G  P++C  C  +F  K  L                             + H
Sbjct: 2   SSGS-SGAGVNPYKCSQCEKSFSGKLRL-----------------------------LVH 31

Query: 299 YRIHTDEKPFNCS 311
            R+HT EKP   S
Sbjct: 32  QRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                    P+ CS CEK F  K+ +  H R+
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM 34

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                 + K + C  CG  F  KS  + HQ IHT  KP   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 18/68 (26%), Positives = 20/68 (29%), Gaps = 29/68 (42%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S +  +  QC  C   F  K HL                              QH RIHT
Sbjct: 6   SGSSTKSHQCHECGRGFTLKSHL-----------------------------NQHQRIHT 36

Query: 304 DEKPFNCS 311
            EKP   S
Sbjct: 37  GEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 9/33 (27%), Positives = 12/33 (36%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 +  K   C  C + F  K H+  H RI
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI 34

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 14/42 (33%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                   +   C  C   F   S L  H+RIH   KP   +
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KPY CK C   F      + H+ +HT  +    
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 29/68 (42%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S +G++P++CK C   F +  HL                              QH R+HT
Sbjct: 6   SGSGKKPYECKECRKTFIQIGHL-----------------------------NQHKRVHT 36

Query: 304 DEKPFNCS 311
            E+    S
Sbjct: 37  GERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC 630
                   +P+ C  C  TF Q+  L  H+R+H   +    
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 5e-05
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                + +KP+ C  C K F Q  H+  H R+
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRV 34

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   + + C  CG  F   S+   H+ IHT  KP   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 29/70 (41%)

Query: 242 RISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRI 301
             S  GER  +C  C   F                           +S    N IQH RI
Sbjct: 4   GSSGHGERGHRCSDCGKFF-------------------------LQAS----NFIQHRRI 34

Query: 302 HTDEKPFNCS 311
           HT EKP   S
Sbjct: 35  HTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  +R   C  C   F Q S  + H RIH   KP   +
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 10/33 (30%), Positives = 12/33 (36%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                   E+   CS C K F Q  +   H RI
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRI 34

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 10/41 (24%), Positives = 11/41 (26%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   +PY C  CG  F   S    H   H   K    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 16/73 (21%), Positives = 20/73 (27%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GERP+ C  C   F    HL                             I+H
Sbjct: 2   SSGSS-GSGERPYGCNECGKNFGRHSHL-----------------------------IEH 31

Query: 299 YRIHTDEKPFNCS 311
            + H  EK    S
Sbjct: 32  LKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  +RP+ C  C   F + S L+ H + H   K    +
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 + E+P+ C+ C K F +  H+  HL+ 
Sbjct: 2   SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKR 34

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 11/39 (28%), Positives = 12/39 (30%)

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                  PY C  CG AF  K    +HQ  H        
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.5 bits (101), Expect = 9e-06
 Identities = 14/67 (20%), Positives = 18/67 (26%), Gaps = 29/67 (43%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
             +GE P++C  C  AF  K  L                             I H R H 
Sbjct: 4   GSSGENPYECSECGKAFNRKDQL-----------------------------ISHQRTHA 34

Query: 304 DEKPFNC 310
            E   + 
Sbjct: 35  GESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 8/39 (20%), Positives = 14/39 (35%)

Query: 592 RIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC 630
                + P+ C  C   F +   L++H+R H        
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-07
 Identities = 9/41 (21%), Positives = 14/41 (34%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   +P+ C  CG  F  +S    H  +H+  K    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 17/68 (25%), Positives = 22/68 (32%), Gaps = 29/68 (42%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S +GERPF+C  C   F  + HL                               H R+H+
Sbjct: 6   SGSGERPFKCNECGKGFGRRSHL-----------------------------AGHLRLHS 36

Query: 304 DEKPFNCS 311
            EK    S
Sbjct: 37  REKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  +RPF C  C   F + S L  H R+H   K    +
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                + E+PF C+ C K F ++ H+  HLR+
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRL 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                  EKP+ C +C  +FR    +K+HLRI
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI 33

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 13/40 (32%), Positives = 16/40 (40%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPY 174
                    KPY C+ CG  F H  +  +H  IHT   P 
Sbjct: 1   GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPY 628
                G ++P+ C +C   F  L TL +H RIH    P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 29/65 (44%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S  GE+P+ C+ C   F+    L++H+                             RIHT
Sbjct: 5   SSGGEKPYPCEICGTRFRHLQTLKSHL-----------------------------RIHT 35

Query: 304 DEKPF 308
              P 
Sbjct: 36  GSGPS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHTDLKPY 174
           + Y C+ CG +F  K S   H+ IHT   P 
Sbjct: 9   RVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 29/66 (43%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
             +G+R ++C+ C  +F++K  L                               H RIHT
Sbjct: 4   GSSGQRVYECQECGKSFRQKGSL-----------------------------TLHERIHT 34

Query: 304 DEKPFN 309
              P +
Sbjct: 35  GSGPSS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 300 RIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
              + ++ + C  C K FRQK  +  H RI
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERI 32

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                   K + C  CG  F + S+   HQ +H   K    
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 9/42 (21%), Positives = 16/42 (38%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++  +C  C   F  +S L  H+R+H   K    +
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 16/73 (21%), Positives = 20/73 (27%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      +GE+   C  C                     K+F      Y S     L  H
Sbjct: 2   SSGSS-GSGEKSHTCDECG--------------------KNFC-----YIS----ALRIH 31

Query: 299 YRIHTDEKPFNCS 311
            R+H  EK    S
Sbjct: 32  QRVHMGEKCSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 20/73 (27%), Positives = 24/73 (32%), Gaps = 30/73 (41%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S    S TGE+PFQCK C   F                         ++S SL     +H
Sbjct: 2   SSGS-SGTGEKPFQCKECGMNF-------------------------SWSCSL----FKH 31

Query: 299 YRIHTDEKPFNCS 311
            R H    P   S
Sbjct: 32  LRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 11/42 (26%), Positives = 14/42 (33%)

Query: 135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KP+ CK CG  F+   S   H   H    P   
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 10/41 (24%), Positives = 15/41 (36%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC 630
                  ++PF C  C   F+   +L  H R H+   P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 11/33 (33%), Positives = 12/33 (36%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 T EKPF C  C   F     +  HLR 
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS 34

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           KP+ C  C  AF+ KS    HQ  H + KP   
Sbjct: 9   KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 17/68 (25%), Positives = 22/68 (32%), Gaps = 29/68 (42%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
             +GE+PF C  C  AF                             S K  L+ H + H 
Sbjct: 4   GSSGEKPFGCSCCEKAF-----------------------------SSKSYLLVHQQTHA 34

Query: 304 DEKPFNCS 311
           +EKP   S
Sbjct: 35  EEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 592 RIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                ++PF C  C   F+  S LL H++ H   KP   +
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 300 RIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
              + EKPF CS CEK F  K ++  H + 
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQT 32

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                  EKP+ C  C  +F Q  H++ H+ I
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI 33

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.9 bits (102), Expect = 6e-06
 Identities = 13/39 (33%), Positives = 15/39 (38%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPY 174
                   KPY C+ CG  F   +   AH  IHT   P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPY 628
                G ++P+ C  C   F Q++ L  H  IH    P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLG 275
           S  GE+P++C+ C   F +  HL  HV +H G
Sbjct: 5   SSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                 TD K +NC+ C K F +  H+  H +I
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI 34

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.3 bits (95), Expect = 5e-05
 Identities = 12/41 (29%), Positives = 13/41 (31%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
                 + K Y C  CG AF        HQ IHT       
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHTDLKPY 174
            PY C  CG +F  + S   HQ   +   P 
Sbjct: 10  TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 37.3 bits (87), Expect = 6e-04
 Identities = 10/40 (25%), Positives = 15/40 (37%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYK 629
                G + P+ C  C  +F Q  +L  H+R      P  
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 11/65 (16%), Positives = 17/65 (26%), Gaps = 29/65 (44%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHT 303
           S  GE P+ C  C  +F ++                              +L  H R  +
Sbjct: 5   SSGGETPYLCGQCGKSFTQRG-----------------------------SLAVHQRSCS 35

Query: 304 DEKPF 308
              P 
Sbjct: 36  QSGPS 40

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 43.9 bits (103), Expect = 4e-06
 Identities = 17/55 (30%), Positives = 24/55 (43%)

Query: 118 YPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLK 172
           Y C  C  R +     K H+R H +++PY C YC  +F  K +   H       K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 282 CNVCNYSSSLKWNLIQHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           C  C         L +H R HTD +P++C+ C   F+ K ++  H++ 
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 251 FQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEK 306
           + C+ C    K+   L+ H+  H    + ++C  CN+S   K NL +H +     K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDV-RPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 21 YHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSNKK 77
          Y C  C  +  K + LK+H+  H   +P  C YC   F   G L  H++     +KK
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK-SKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.8 bits (87), Expect = 6e-04
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 229 KPYKQLSNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLG 275
              K+ S L+ HIR +HT  RP+ C YCN++FK K +L  H+     
Sbjct: 9   IRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.8 bits (87), Expect = 6e-04
 Identities = 17/47 (36%), Positives = 23/47 (48%)

Query: 146 YACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRH 192
           Y C+ CG      S    H   HTD++PY C  C  SF+T   + +H
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.5 bits (104), Expect = 8e-06
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 6/97 (6%)

Query: 15  SQDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTS 74
            +++  Y C LC+ + S L     H  +        C YC   F        H  +    
Sbjct: 11  VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH--ESKCE 66

Query: 75  NKKIYYKCDKCNKTYKSKYKFERHKNTHVTENSEYPC 111
            KK    C +C +T+KS +   RH+     +N+  P 
Sbjct: 67  YKK--LTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT 101

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.6 bits (99), Expect = 5e-05
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 4/88 (4%)

Query: 247 GERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEK 306
            +  +QC+ CN          +H  L         C++  +S  LK    Q +    + K
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELK----QEHESKCEYK 68

Query: 307 PFNCSLCEKQFRQKIHVKNHLRIIHNMN 334
              C  C + F+    +  H   +HN N
Sbjct: 69  KLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 40.3 bits (93), Expect = 3e-04
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 6/94 (6%)

Query: 739 KHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMK 798
              +++  Y C  C        +  +H     ER       C  C+  F   +    H  
Sbjct: 9   SPVENKEVYQCRLCNAKLSSLLEQGSH-----ERLCRNAAVCPYCSLRFFSPELKQEHES 63

Query: 799 THLI-QYRCTRCNKTFKQNTSFIRHSLKHFNSSN 831
                +  C  C +TFK + S  RH ++  N +N
Sbjct: 64  KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNN 97

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.1 bits (90), Expect = 7e-04
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 115 RNIYPCSFCAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPY 174
           + +Y C  C  +        +H R+  N     C YC   F     +  H++   + K  
Sbjct: 14  KEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHES-KCEYKKL 70

Query: 175 LCLTCGQSFRTFNLMKRHNLCDHQ 198
            CL C ++F++   + RH +  H 
Sbjct: 71  TCLECMRTFKSSFSIWRHQVEVHN 94

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 590 HMRIHGKDRPFSC--LLCNNTFAQLSTLLNHERIHDNHKPYKCT 631
                  ++PF+C    C   F++   L  H R H   KP   +
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 40.4 bits (95), Expect = 5e-05
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 135 AHLRIHLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDLKPYLC 176
           +        KP+AC +  CG  F+       H+  H+ +KP   
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 16/73 (21%), Positives = 21/73 (28%), Gaps = 28/73 (38%)

Query: 239 SHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQH 298
           S      TGE+PF C +                             C +  S    L +H
Sbjct: 2   SSGSS-GTGEKPFACTWPG---------------------------CGWRFSRSDELSRH 33

Query: 299 YRIHTDEKPFNCS 311
            R H+  KP   S
Sbjct: 34  RRSHSGVKPSGPS 46

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 9/77 (11%)

Query: 235 SNLQSHIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWN 294
            +     +I H G+R  +C  C   F  +  L           K+  C  C   S  +  
Sbjct: 4   GSSGKRQKI-HLGDRSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAA 54

Query: 295 LIQHYRIHTDEKPFNCS 311
           L +     + +K    S
Sbjct: 55  LNKDEGNESGKKTSGPS 71

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 7/52 (13%)

Query: 132 HFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSF 183
                 +IHL  +   C  CG  F  +S+        +  K  +C  C +  
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDS 49

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC 179
           K  AC+ CG  F      + H+  H+  KPY     
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHL 274
             TG +PFQC  C+ +F    HL  H   H+
Sbjct: 5   GSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC 176
           KPY+C  C   F+  +    HQ +HT       
Sbjct: 9   KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 24/82 (29%)

Query: 196 DHQDVRNYLCNF--CNKTYKDRKTLDNHILGHVDIKPYKQLSNLQSHIRISHTGERPFQC 253
           D   +R+++C+   C KTY                    + S+L++H R  HTGE+PF C
Sbjct: 11  DSSRIRSHICSHPGCGKTYF-------------------KSSHLKAHTRT-HTGEKPFSC 50

Query: 254 KY--CNYAFKEKHHLETHVNLH 273
            +  C   F     L  H   H
Sbjct: 51  SWKGCERRFARSDELSRHRRTH 72

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (87), Expect = 5e-04
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 244 SHTGERPFQCKYCNYAFKEKHHLETHVNLHLGK 276
           S  GE PF+C  C+  F ++++L  H   H  K
Sbjct: 6   SGAGENPFKCSKCDRVFTQRNYLVQHERTHARK 38

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.1 bits (86), Expect = 7e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
                   E PF CS C++ F Q+ ++  H R 
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERT 34

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	836
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.84
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.82
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.82
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.69
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.68
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.68
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.67
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.66
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.66
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.65
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.65
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.65
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.65
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.65
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.64
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.64
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.63
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.6
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.6
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.59
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.58
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.58
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.57
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.57
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.56
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.55
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.54
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.52
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.51
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.46
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.46
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.45
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.44
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.44
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.42
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.4
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.4
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.39
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.39
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.38
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.38
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.37
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.37
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.37
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.35
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.35
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.35
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.34
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.34
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.32
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.32
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.31
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.31
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.3
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.29
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.27
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.27
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.25
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.25
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.18
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.18
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.15
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.14
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.1
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.1
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.97
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.97
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.97
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.96
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.96
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.96
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.95
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.94
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.93
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.92
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.92
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.91
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.91
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.91
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.9
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.89
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.89
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.88
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.88
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.87
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.86
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.86
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.85
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.84
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.84
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.83
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.82
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.82
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.8
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.8
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.8
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.79
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.79
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.79
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.78
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.77
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.76
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.75
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.75
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.73
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.72
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.67
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.64
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.63
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.62
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.57
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.52
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.47
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.46
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.43
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.4
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.37
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.37
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.36
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.28
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.25
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.23
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.21
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.18
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.16
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.11
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.07
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.07
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.07
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.05
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.0
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.0
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.96
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.13
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.09
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.86
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.85
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.84
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.83
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.82
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.82
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.82
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.81
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.81
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.81
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.81
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.8
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.79
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.78
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.78
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.78
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.77
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.77
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.76
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.75
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.75
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.93
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.9
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.7
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.7
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.68
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.68
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.68
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.68
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.66
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.83
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.63
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.78
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.53
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.24
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.22
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.98
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.94
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.54
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.48
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.09
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.76
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.68
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.62
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.34
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.49
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.52
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.22
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	83.51
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	82.84
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	81.97
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	81.65

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.1e-35  Score=283.01  Aligned_cols=181  Identities=29%  Similarity=0.604  Sum_probs=104.5

Q ss_pred             chhhhhhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCCCc
Q psy6556         584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNC  663 (836)
Q Consensus       584 ~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~c  663 (836)
                      ...|..|++++.+++||.|++|++.|.+...|..|+++|++++||.|+.|++.|.+...|..|++.|++++         
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~---------   76 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEK---------   76 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCC---------
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCC---------
Confidence            34566777788888888888888888888888888888888888888888888888777777777766543         


Q ss_pred             cccccchhHHHhhhhhcccCCCCCCcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCC
Q psy6556         664 IFSTKFYSCLRRHRKIFHSNESYAPAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQH  743 (836)
Q Consensus       664 ~~~~~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~  743 (836)
                                              +|.|++|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|+++|+  +
T Consensus        77 ------------------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~  130 (190)
T 2i13_A           77 ------------------------PYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT--G  130 (190)
T ss_dssp             ------------------------CEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH--C
T ss_pred             ------------------------CccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC--C
Confidence                                    44556666666666667777766666666777777777766666766666665  3


Q ss_pred             CCceecCcccccccchhhhhhHHHhhcccCCCCccccCccchhcccchhHHHHHhhcCC
Q psy6556         744 EGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTHLI  802 (836)
Q Consensus       744 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~h~~  802 (836)
                      +++|.|++||+.|.+...|..|+++|.+++   +|+|++|+++|.++..|..||++|++
T Consensus       131 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~---~~~C~~C~~~f~~~~~L~~H~~~H~~  186 (190)
T 2i13_A          131 EKPYKCPECGKSFSREDNLHTHQRTHTGEK---PYKCPECGKSFSRRDALNVHQRTHTG  186 (190)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCC---CEECTTTCCEESSHHHHHHHHTTC--
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHhcCCCC---CeECCCCCCccCCHHHHHHHHHhcCC
Confidence            556666666666666666666666666554   36666666666666666666666653

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=7.4e-35  Score=279.17  Aligned_cols=184  Identities=26%  Similarity=0.548  Sum_probs=107.3

Q ss_pred             hhHHHHhhhcCCCCccccCcchhhccChhHHHHHHhhhcCCCcccccccccccCCHHHHHHHHhhhcCCCccccccchhc
Q psy6556         408 YNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQT  487 (836)
Q Consensus       408 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  487 (836)
                      ..|..|++.|.++++|.|+.|++.|.+...|..|+++|.++.+|.|+.|++.|.+...|..|++.|.++.+|.|++|++.
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   86 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKS   86 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCc
Confidence            45666777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             ccChHHHHHHHhhhcCCCcccCccccccccChHHHHHHHHHHhCCCCCceecCCCCcccccccccccccccccCCccCCC
Q psy6556         488 MAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGKQKQRFMCHRCGIINLKRKYHVYHLKYECGYTRTLP  567 (836)
Q Consensus       488 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~~~~~~~~~~h~~~~~~~~~~~~  567 (836)
                      |.+...|..|++.|.++++|.|++|++.|.+...|..|++.++                                     
T Consensus        87 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------------------  129 (190)
T 2i13_A           87 FSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT-------------------------------------  129 (190)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH-------------------------------------
T ss_pred             cCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC-------------------------------------
Confidence            7777777777777777777777777777777766666655443                                     


Q ss_pred             hhhhhccccceeccccchhhhhhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHh
Q psy6556         568 PELRRQFKHDIVYMDSKTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHE  647 (836)
Q Consensus       568 ~~~~~~~~~~~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  647 (836)
                                                  +++||.|++|++.|.+.+.|..|+++|++++||+|++|+++|.+...|..|+
T Consensus       130 ----------------------------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~  181 (190)
T 2i13_A          130 ----------------------------GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ  181 (190)
T ss_dssp             ----------------------------CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             ----------------------------CCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHH
Confidence                                        3345666666666666666666766666666777777777777777777776


Q ss_pred             hhhccCccc
Q psy6556         648 RIYHQDHVF  656 (836)
Q Consensus       648 ~~h~~~~~~  656 (836)
                      ++|+|++||
T Consensus       182 ~~H~~~k~~  190 (190)
T 2i13_A          182 RTHTGKKTS  190 (190)
T ss_dssp             TTC------
T ss_pred             HhcCCCCCC
Confidence            666666654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1.9e-30  Score=248.42  Aligned_cols=134  Identities=27%  Similarity=0.540  Sum_probs=100.4

Q ss_pred             ccchHhhhchhHHHHHHHHhcCcCcccCC--cccccccCchhHHHHHHhhcCCCCCceec--CcccccccchhhhhhHHH
Q psy6556         692 KICNQSFALFSNLNAHYNKHLKVRRFSCT--NCSLNFTYLSNLIRHRRIKHSQHEGKYVC--NYCGKSYIDKRDYTNHVS  767 (836)
Q Consensus       692 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~~h~~~~~~~~C--~~C~~~f~~~~~l~~H~~  767 (836)
                      ++|++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++..|..++++|.|  ++||+.|.+...|..|++
T Consensus        48 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~  127 (190)
T 1tf6_A           48 EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF  127 (190)
T ss_dssp             TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG
T ss_pred             CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH
Confidence            55666677777777777777777777777  67777777777777775555445677888  778888888888888888


Q ss_pred             hhcccCCCCccccCc--cchhcccchhHHHHHhhcCCCccCCc---cchhcccchhhhhccccccCC
Q psy6556         768 VHMERKSGYTQRCHK--CNATFRIKKFLTRHMKTHLIQYRCTR---CNKTFKQNTSFIRHSLKHFNS  829 (836)
Q Consensus       768 ~H~~~~~~~~~~C~~--C~~~F~~~~~L~~H~~~h~~~~~C~~---C~~~f~~~~~l~~H~~~H~~~  829 (836)
                      +|.+++   +|+|++  |+++|.+++.|..|+++|++ |.|++   |++.|.+...|..|+++|+++
T Consensus       128 ~H~~~~---~~~C~~~~C~k~F~~~~~L~~H~~~H~~-~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          128 SHTQQL---PYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             GGSSSC---SSBCCSSSCCCBCSSHHHHHHHHTSSCS-CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HhCCCC---CccCCCCCCCchhcCHHHHHHHHHHhCC-CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            877665   378876  88888888888888888877 78887   888888888888888887754

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1e-29  Score=243.39  Aligned_cols=169  Identities=21%  Similarity=0.419  Sum_probs=106.2

Q ss_pred             cCCCCccc--ccchHhhcCchhHHhhhhhcCCCccccC--CccchhhcchhhHHHHhhhhccCccccccCCCccccccch
Q psy6556         595 GKDRPFSC--LLCNNTFAQLSTLLNHERIHDNHKPYKC--TKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFY  670 (836)
Q Consensus       595 ~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~c~~~~~~~  670 (836)
                      .+.++|.|  +.|+++|.+...|..|+++|++++||.|  +.|++.|.+...|..|+++|+++++|.|....|+..|...
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   87 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTK   87 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCH
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCH
Confidence            45788999  6899999999999999999999999999  8899999999999999999988777776622244444444


Q ss_pred             hHHHhhhhhcc-cCCCCCCccc--ccchHhhhchhHHHHHHHHhcCcCcccCCc--ccccccCchhHHHHHHhhcCCCCC
Q psy6556         671 SCLRRHRKIFH-SNESYAPAKC--KICNQSFALFSNLNAHYNKHLKVRRFSCTN--CSLNFTYLSNLIRHRRIKHSQHEG  745 (836)
Q Consensus       671 ~~l~~H~~~~~-~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~  745 (836)
                      ..|.+|++..| .++  .+|.|  ++||+.|.+.+.|..|++.|++++||.|++  |++.|.+.+.|..|+++|++    
T Consensus        88 ~~l~~H~~~~h~~~~--~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~----  161 (190)
T 1tf6_A           88 ANMKKHFNRFHNIKI--CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----  161 (190)
T ss_dssp             HHHHHHHHTTSSTTT--SCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS----
T ss_pred             HHHHHHHHHhcCCCc--ceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC----
Confidence            55555553333 122  34555  445555555555555555555555555544  55555555555555544331    


Q ss_pred             ceecCc---ccccccchhhhhhHHHhhc
Q psy6556         746 KYVCNY---CGKSYIDKRDYTNHVSVHM  770 (836)
Q Consensus       746 ~~~C~~---C~~~f~~~~~l~~H~~~H~  770 (836)
                       |.|++   |++.|.....|..|+++|+
T Consensus       162 -~~C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          162 -YPCKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             -CCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             -CcCCCCCcCCCccccHHHHHHHHHhhc
Confidence             44444   4444444444444444443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=4.6e-26  Score=210.15  Aligned_cols=107  Identities=26%  Similarity=0.457  Sum_probs=85.3

Q ss_pred             cccchHhhhchhHHHHHHHHhcCcCcccCCc--ccccccCchhHHHHHHhhcCCCCCceecCc--ccccccchhhhhhHH
Q psy6556         691 CKICNQSFALFSNLNAHYNKHLKVRRFSCTN--CSLNFTYLSNLIRHRRIKHSQHEGKYVCNY--CGKSYIDKRDYTNHV  766 (836)
Q Consensus       691 C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~  766 (836)
                      |..|++.|.+...|..|++.|++++||.|++  |++.|.+...|..|+++|+  ++++|.|++  |++.|.+...|..|+
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~L~~H~  119 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT--GEKPYMCEHEGCSKAFSNASDRAKHQ  119 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTT--TCCCEECCSTTCCCEESSSSTTHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcC--CCCCeeCCCCCCCCccCCHHHHHHHH
Confidence            6667788888888888888888888888875  8888888888888888776  467788887  888888888888887


Q ss_pred             -HhhcccCCCCccccCc--cchhcccchhHHHHHhhcCC
Q psy6556         767 -SVHMERKSGYTQRCHK--CNATFRIKKFLTRHMKTHLI  802 (836)
Q Consensus       767 -~~H~~~~~~~~~~C~~--C~~~F~~~~~L~~H~~~h~~  802 (836)
                       ++|.+++   +|+|++  |+++|.+++.|..||++|++
T Consensus       120 ~~~H~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          120 NRTHSNEK---PYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHTTCSCC---CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHhcCCCC---CeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence             6787665   488877  88888888888888887764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=2.5e-24  Score=198.46  Aligned_cols=104  Identities=31%  Similarity=0.639  Sum_probs=49.5

Q ss_pred             cCccccccCChhhHHhhhhhcccCCCccccccCCCcccCCc--ccccccChHHHHHHHHHhcCCCceeccc--cccccCC
Q psy6556          82 CDKCNKTYKSKYKFERHKNTHVTENSEYPCIYCRNIYPCSF--CAYRGRYRYHFKAHLRIHLNIKPYACKY--CGNAFAH  157 (836)
Q Consensus        82 C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~  157 (836)
                      |+.|++.|.+...|..|++.|.++.          +|.|++  |++.|.+...|..|+++|.++++|.|++  |+++|.+
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~----------~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  111 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEK----------PHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSN  111 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCC----------CCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESS
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCC----------CccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCC
Confidence            3344455555555555554444332          344442  4444444444444444444444455544  5555555


Q ss_pred             cchHHHHH-HHhCCCCCcccCc--CCCcccChhhhhhhhhc
Q psy6556         158 KSSRDAHQ-NIHTDLKPYLCLT--CGQSFRTFNLMKRHNLC  195 (836)
Q Consensus       158 ~~~L~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~  195 (836)
                      .+.|..|+ ++|.+++||.|++  |++.|.+...|..|++.
T Consensus       112 ~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  152 (155)
T 2gli_A          112 ASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT  152 (155)
T ss_dssp             SSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHh
Confidence            55555554 4444444444444  44444444444444443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=6.2e-23  Score=180.35  Aligned_cols=102  Identities=23%  Similarity=0.474  Sum_probs=73.4

Q ss_pred             CCcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHH
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHV  766 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~  766 (836)
                      ++|.|++||++|.+.+.|..|++.|++++||+|++|++.|.+.+.|..|+++|.  ++++|.|++||+.|.....|..|+
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C~k~F~~~~~L~~H~   98 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHT--GERRYQCLACGKSFINYQFMSSHI   98 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHH--TCCCEEESSSCCEESSHHHHHHHH
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccC--CCccccCCCCCCCcCCHHHHHHHh
Confidence            677777777777777777777777777777777777777777777777777765  467777777777777777777777


Q ss_pred             HhhcccCC---CCccccCccchhcccc
Q psy6556         767 SVHMERKS---GYTQRCHKCNATFRIK  790 (836)
Q Consensus       767 ~~H~~~~~---~~~~~C~~C~~~F~~~  790 (836)
                      ++|+++++   ..+|+|.+|++.|...
T Consensus        99 ~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           99 KSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            77766543   2235555555555443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=5.7e-22  Score=174.93  Aligned_cols=113  Identities=24%  Similarity=0.490  Sum_probs=92.4

Q ss_pred             CCcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhc-CCCCCceecCcccccccchhhhhhH
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKH-SQHEGKYVCNYCGKSYIDKRDYTNH  765 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h-~~~~~~~~C~~C~~~f~~~~~l~~H  765 (836)
                      ++|+|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|++.++ ..++++|.|++|++.|.+...|..|
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H   85 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH   85 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHH
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHH
Confidence            678899999999988999999988888888999999999988889998888653 2356788888888888888888888


Q ss_pred             HHhhcccCCCCccccCccchhcccchhHHHHHhh-cCC
Q psy6556         766 VSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKT-HLI  802 (836)
Q Consensus       766 ~~~H~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~-h~~  802 (836)
                      +++|.+++   +|+|++|+++|.++..|..||++ |.+
T Consensus        86 ~~~h~~~~---~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           86 MVSHTGEM---PYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHSSSC---SEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHcCCCC---CccCCCccchhCCHHHHHHHHHHHCCC
Confidence            88887765   48888888888888888888764 544

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=9.4e-23  Score=179.20  Aligned_cols=106  Identities=25%  Similarity=0.410  Sum_probs=96.7

Q ss_pred             HHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCCCCccccCccch
Q psy6556         706 AHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNA  785 (836)
Q Consensus       706 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~  785 (836)
                      .|.++|.|+++|+|++||+.|.+.+.|..|+++|.  ++++|+|++||+.|.....|..|+++|.+++   +|.|++||+
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k---~~~C~~C~k   86 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHS--WEKKYPCRYCEKVFPLAEYRTKHEIHHTGER---RYQCLACGK   86 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHH--CCSCEECSSSSCEESSHHHHHHHHHHHHTCC---CEEESSSCC
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcC--CCCCeeCCccCeecccccchhhhccccCCCc---cccCCCCCC
Confidence            34567889999999999999999999999999987  5899999999999999999999999999887   499999999


Q ss_pred             hcccchhHHHHHhhcCC--------CccCCccchhcccc
Q psy6556         786 TFRIKKFLTRHMKTHLI--------QYRCTRCNKTFKQN  816 (836)
Q Consensus       786 ~F~~~~~L~~H~~~h~~--------~~~C~~C~~~f~~~  816 (836)
                      +|.+++.|..||++|++        +|+|.+|++.|...
T Consensus        87 ~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           87 SFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             EESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            99999999999999852        59999999988644

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=8.2e-22  Score=172.42  Aligned_cols=109  Identities=26%  Similarity=0.560  Sum_probs=95.4

Q ss_pred             CCccccc--chHhhhchhHHHHHHHHhcCcCcccCC--cccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhh
Q psy6556         687 APAKCKI--CNQSFALFSNLNAHYNKHLKVRRFSCT--NCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDY  762 (836)
Q Consensus       687 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l  762 (836)
                      ++|.|++  |++.|.+.+.|..|++.|.++++|.|+  .|++.|.+...|..|+++|+  ++++|.|++|++.|.+...|
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT--GVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHH
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcC--CCCCccCCccCchhCCHHHH
Confidence            6788987  999999999999999999999999998  69999999999999998877  47789999999999999999


Q ss_pred             hhHHHhhcccCCCCcccc--CccchhcccchhHHHHHhhc
Q psy6556         763 TNHVSVHMERKSGYTQRC--HKCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       763 ~~H~~~H~~~~~~~~~~C--~~C~~~F~~~~~L~~H~~~h  800 (836)
                      ..|+++|.+++   +|+|  ++||++|.++..|..|+++|
T Consensus        83 ~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEK---PFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCC---CEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCC---CeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999988776   4888  78999999999999998876

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=5.7e-21  Score=168.49  Aligned_cols=115  Identities=26%  Similarity=0.533  Sum_probs=77.4

Q ss_pred             CCCCccccCcchhhccChhHHHHHHhhhcCCCcccccccccccCCHHHHHHHHhh---hcCCCccccccchhcccChHHH
Q psy6556         418 TGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKR---HFNTNKPVCEICSQTMAHNQVL  494 (836)
Q Consensus       418 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l  494 (836)
                      +++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.   +.++.+|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            3455666666666666666666666666666666666666666666666666664   3455667777777777777777


Q ss_pred             HHHHhhhcCCCcccCccccccccChHHHHHHHHHHhCC
Q psy6556         495 QRHMTLHFTQNKHPCNRCNASFSSMVQLSCHQIRAHGK  532 (836)
Q Consensus       495 ~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~  532 (836)
                      ..|++.|.++++|.|++|++.|.+...|..|++..|+.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            77777777777777777777777777777777666654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=1.8e-21  Score=171.44  Aligned_cols=109  Identities=28%  Similarity=0.540  Sum_probs=61.7

Q ss_pred             CCcccc--cchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCc--ccccccchhhh
Q psy6556         687 APAKCK--ICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNY--CGKSYIDKRDY  762 (836)
Q Consensus       687 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~l  762 (836)
                      ++|.|+  +|++.|.+...|..|++.| ++++|.|++|++.|.+...|..|+++|+  ++++|.|++  |++.|.+...|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT--GEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTS--CCCCEECCSTTCCCEESCHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcC--CCCCeeCCCCCCcCccCCHHHH
Confidence            455665  5666666666666666655 5556666666666666666666665554  245566654  66666666666


Q ss_pred             hhHHHhhcccCCCCccccC--ccchhcccchhHHHHHhhcC
Q psy6556         763 TNHVSVHMERKSGYTQRCH--KCNATFRIKKFLTRHMKTHL  801 (836)
Q Consensus       763 ~~H~~~H~~~~~~~~~~C~--~C~~~F~~~~~L~~H~~~h~  801 (836)
                      ..|+++|.+++   +|.|+  .|+++|.+++.|..|+++|+
T Consensus        81 ~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~H~  118 (124)
T 1ubd_C           81 RTHVRIHTGDR---PYVCPFDGCNKKFAQSTNLKSHILTHA  118 (124)
T ss_dssp             HHHHHHHHCCC---CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             HHHHHHhCCCC---ceECCCCCCCCccCCHHHHHHHHHHHc
Confidence            66666555544   25553  25555555555555555554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.82  E-value=8.9e-21  Score=174.43  Aligned_cols=116  Identities=22%  Similarity=0.416  Sum_probs=68.3

Q ss_pred             CCcccccchHhhhchhHHHHHHHH-hcCcCc--------ccCCcccccccCchhHHHHHHhhcCCCCCceecCc--cccc
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNK-HLKVRR--------FSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNY--CGKS  755 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~  755 (836)
                      .+|.|.+|++.|.+...|..|++. |.+.++        |.|++|++.|.+...|..|+++|+  ++++|.|++  |++.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT--GEKPFPCPFPGCGKI  101 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHH--CCCSEECSCTTTCCE
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcC--CCCcccCCcCCCCCc
Confidence            566777777777777777777766 554443        556666666666666666665554  245556655  6666


Q ss_pred             ccchhhhhhHHHhhcccCCCCccccCc--cchhcccchhHHHHHhhcCC--CccCC
Q psy6556         756 YIDKRDYTNHVSVHMERKSGYTQRCHK--CNATFRIKKFLTRHMKTHLI--QYRCT  807 (836)
Q Consensus       756 f~~~~~l~~H~~~H~~~~~~~~~~C~~--C~~~F~~~~~L~~H~~~h~~--~~~C~  807 (836)
                      |.....|..|+++|.+++   +|+|++  |+++|.++..|..|+++|++  ||.|+
T Consensus       102 f~~~~~L~~H~~~h~~~~---~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEK---PFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSC---SBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             cCCHHHHHHHHHhhCCCC---CccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            665566666655555544   255554  55555555555555555543  45553

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=1.3e-20  Score=164.72  Aligned_cols=109  Identities=23%  Similarity=0.551  Sum_probs=63.2

Q ss_pred             CCCccccCc--chhhccChhHHHHHHhhhcCCCccccc--ccccccCCHHHHHHHHhhhcCCCccccccchhcccChHHH
Q psy6556         419 GFKPYQCKT--CNASYASMRVLQHHEITHSKTLKFPCI--NCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVL  494 (836)
Q Consensus       419 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  494 (836)
                      ++++|.|++  |++.|.+...|..|+++|.++.+|.|+  .|++.|.+...|..|++.|.++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            445555554  555555555555555555555555555  4555555555555555555555555555555555555566


Q ss_pred             HHHHhhhcCCCcccC--ccccccccChHHHHHHHH
Q psy6556         495 QRHMTLHFTQNKHPC--NRCNASFSSMVQLSCHQI  527 (836)
Q Consensus       495 ~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~  527 (836)
                      ..|++.|.++++|.|  +.|++.|.+...|..|++
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  117 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN  117 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHh
Confidence            666655555556666  556666666666666554

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.82  E-value=1e-20  Score=166.71  Aligned_cols=115  Identities=23%  Similarity=0.494  Sum_probs=71.0

Q ss_pred             CCCcccc--cchHhhcChhhHHHHhhhcCCCCccccCcchhhccChhHHHHHHhhhcCCCcccccc--cccccCCHHHHH
Q psy6556         392 KQPSICA--VCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCIN--CGKYFTKLEYMI  467 (836)
Q Consensus       392 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~  467 (836)
                      +++|.|+  .|++.|.+...|..|+++| ++++|.|++|++.|.+...|..|+++|.++.+|.|+.  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            3456666  6666666666666666666 5666666666666666666666666666666666654  666666666666


Q ss_pred             HHHhhhcCCCccccc--cchhcccChHHHHHHHhhhcCCCcc
Q psy6556         468 KHMKRHFNTNKPVCE--ICSQTMAHNQVLQRHMTLHFTQNKH  507 (836)
Q Consensus       468 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  507 (836)
                      .|++.|.++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            666666666666664  3666666666666666666655543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.82  E-value=1.8e-20  Score=172.36  Aligned_cols=119  Identities=25%  Similarity=0.449  Sum_probs=93.9

Q ss_pred             CCCcccccchHhhcChhhHHHHhhh-cCCCCc--------cccCcchhhccChhHHHHHHhhhcCCCcccccc--ccccc
Q psy6556         392 KQPSICAVCGDTFKTNYNYFVHMRR-HTGFKP--------YQCKTCNASYASMRVLQHHEITHSKTLKFPCIN--CGKYF  460 (836)
Q Consensus       392 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f  460 (836)
                      ..+|.|.+|++.|.+...|..|++. |.+..+        |.|++|++.|.+...|..|+++|.++++|.|++  |++.|
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  102 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF  102 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEE
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCcc
Confidence            4567777777777777777777776 555544        778888888888888888888888888888877  88888


Q ss_pred             CCHHHHHHHHhhhcCCCcccccc--chhcccChHHHHHHHhhhcCCCcccCc
Q psy6556         461 TKLEYMIKHMKRHFNTNKPVCEI--CSQTMAHNQVLQRHMTLHFTQNKHPCN  510 (836)
Q Consensus       461 ~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  510 (836)
                      .+...|..|++.|.++++|.|++  |++.|.+...|..|+++|+++++|.|+
T Consensus       103 ~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          103 ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             SCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            88888888888888888888886  888888888888888888888888774

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.70  E-value=8.4e-18  Score=135.54  Aligned_cols=81  Identities=30%  Similarity=0.576  Sum_probs=46.5

Q ss_pred             CcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHH
Q psy6556         688 PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVS  767 (836)
Q Consensus       688 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~  767 (836)
                      ||.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+  ++++|.|++|++.|.+...|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHT--GEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHH--TCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhc--CCCCCcCCCcchhhCChHHHHHHHH
Confidence            35555666666666666666665555555555555555555555555555554  2445555555555555555555555


Q ss_pred             hhc
Q psy6556         768 VHM  770 (836)
Q Consensus       768 ~H~  770 (836)
                      +|+
T Consensus        79 ~H~   81 (82)
T 2kmk_A           79 KHT   81 (82)
T ss_dssp             HHC
T ss_pred             hhC
Confidence            553

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=2e-17  Score=137.52  Aligned_cols=87  Identities=26%  Similarity=0.545  Sum_probs=58.4

Q ss_pred             CCcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHH
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHV  766 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~  766 (836)
                      ++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|+++|++..+++|.|++|++.|.+...|..|+
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~   85 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHI   85 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHH
T ss_pred             CCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHH
Confidence            56677777777777777777777777777777777777777777777777666643336666777777676666666666


Q ss_pred             H-hhcccC
Q psy6556         767 S-VHMERK  773 (836)
Q Consensus       767 ~-~H~~~~  773 (836)
                      + +|.++.
T Consensus        86 ~~~H~~~~   93 (95)
T 2yt9_A           86 KQVHSGPS   93 (95)
T ss_dssp             HHTSCCCS
T ss_pred             HHhcCCCC
Confidence            4 565543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.4e-17  Score=137.44  Aligned_cols=85  Identities=26%  Similarity=0.548  Sum_probs=68.4

Q ss_pred             CCcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHH
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHV  766 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~  766 (836)
                      +||.|++|++.|.+...|..|++.|+++++|.|++|++.|.....|..|+++|+  ++++|.|++|++.|.....|..|+
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~   84 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS--DERPFKCQICPYASRNSSQLTVHL   84 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSC--CCCCEECSSSSCEESSHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhC--CCCCccCCCCCCccCCHHHHHHHH
Confidence            678888888888888888888888888888888888888888888888887766  467788888888888888888888


Q ss_pred             HhhcccC
Q psy6556         767 SVHMERK  773 (836)
Q Consensus       767 ~~H~~~~  773 (836)
                      ++|.+++
T Consensus        85 ~~h~~~~   91 (96)
T 2dmd_A           85 RSHTGDS   91 (96)
T ss_dssp             TTCCSCC
T ss_pred             HHhcCCC
Confidence            8887665

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.68  E-value=2.6e-17  Score=135.37  Aligned_cols=85  Identities=26%  Similarity=0.618  Sum_probs=60.3

Q ss_pred             CCcccc--cchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhh
Q psy6556         687 APAKCK--ICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTN  764 (836)
Q Consensus       687 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~  764 (836)
                      +||.|+  .|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+  ++++|.|++|++.|.+...|..
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT--GEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH--CCCCEECTTTCCEESSHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcC--CCCCccCCCCCchhCCHHHHHH
Confidence            567776  477777777777777777777777777777777777777777777666  3566777777777777777777


Q ss_pred             HHHhhcccC
Q psy6556         765 HVSVHMERK  773 (836)
Q Consensus       765 H~~~H~~~~  773 (836)
                      |+++|.+++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            777776653

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.68  E-value=3.3e-17  Score=131.98  Aligned_cols=82  Identities=30%  Similarity=0.623  Sum_probs=70.8

Q ss_pred             cccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCCCCccccCccchhcccchhHHH
Q psy6556         716 RFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTR  795 (836)
Q Consensus       716 ~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~~~~~L~~  795 (836)
                      ||.|++|++.|.+...|..|+++|+  ++++|.|++|++.|.....|..|+++|.+++   +|+|++|+++|.++..|..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~---~~~C~~C~~~f~~~~~l~~   75 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS--DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEK---PHKCQVCGKAFSQSSNLIT   75 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH--TCCCEECSSSCCEESSHHHHHHHHHHHHTCC---CEECTTTSCEESSHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcC--CCCCeeCCcCChhhCCHHHHHHHHHHhcCCC---CCcCCCcchhhCChHHHHH
Confidence            6889999999999999999998877  4678999999999999999999999988766   4889999999999999999


Q ss_pred             HHhhcCC
Q psy6556         796 HMKTHLI  802 (836)
Q Consensus       796 H~~~h~~  802 (836)
                      ||++|++
T Consensus        76 H~~~H~g   82 (82)
T 2kmk_A           76 HSRKHTG   82 (82)
T ss_dssp             HHHHHC-
T ss_pred             HHHhhCC
Confidence            9988864

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1.6e-17  Score=143.71  Aligned_cols=99  Identities=15%  Similarity=0.151  Sum_probs=75.1

Q ss_pred             CchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhh--hccCccccccCCCccccccchhHHHhhhhhcccCCCCCC
Q psy6556         611 QLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERI--YHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAP  688 (836)
Q Consensus       611 ~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~c~c~~~~~~~~~l~~H~~~~~~~~~~~~  688 (836)
                      +.+.|..|+++|++++||.|++|++.|.....|..|++.  |.+++                                ..
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~--------------------------------~~   50 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDD--------------------------------NH   50 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCS--------------------------------CC
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccC--------------------------------CC
Confidence            456788888888888888888888888888888888876  33222                                23


Q ss_pred             cccccchHhh--hchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcC
Q psy6556         689 AKCKICNQSF--ALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHS  741 (836)
Q Consensus       689 ~~C~~C~~~f--~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~  741 (836)
                      +.|++|++.|  .....|..|++.|++++||.|++|++.|...+.|..|++++|.
T Consensus        51 ~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           51 ETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             CCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred             ccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCC
Confidence            4477777777  6777777777777778888888888888888888888877774

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.2e-16  Score=133.01  Aligned_cols=87  Identities=33%  Similarity=0.598  Sum_probs=54.2

Q ss_pred             CCCcccccchHhhcChhhHHHHhhhcCCCCccccCcchhhccChhHHHHHHhhhcCCCcccccccccccCCHHHHHHHHh
Q psy6556         392 KQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMK  471 (836)
Q Consensus       392 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  471 (836)
                      +++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   85 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLR   85 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHT
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            45566666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             hhcCCCc
Q psy6556         472 RHFNTNK  478 (836)
Q Consensus       472 ~h~~~~~  478 (836)
                      .|+++..
T Consensus        86 ~h~~~~~   92 (96)
T 2dmd_A           86 SHTGDSG   92 (96)
T ss_dssp             TCCSCCC
T ss_pred             HhcCCCC
Confidence            5555443

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.66  E-value=1.8e-16  Score=134.76  Aligned_cols=88  Identities=35%  Similarity=0.744  Sum_probs=44.4

Q ss_pred             CCCcccccchHhhcChhhHHHHhhhcCCCCccccCcchhhccChhHHHHHHhhhcCCCcccccccccccCCHHHHHHHHh
Q psy6556         392 KQPSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMK  471 (836)
Q Consensus       392 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  471 (836)
                      +++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH
Confidence            34455555555555555555555555555555555555555555555555555554444444444444444444444444


Q ss_pred             hhcCCCcc
Q psy6556         472 RHFNTNKP  479 (836)
Q Consensus       472 ~h~~~~~~  479 (836)
                      .|.++++|
T Consensus        95 ~H~~~~~~  102 (106)
T 2ee8_A           95 LHMQTSSP  102 (106)
T ss_dssp             HTTSCCCC
T ss_pred             HhCCCCCC
Confidence            44444433

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=1.2e-17  Score=144.47  Aligned_cols=95  Identities=19%  Similarity=0.229  Sum_probs=49.8

Q ss_pred             hhHHHHhhhcCCCCccccCcchhhccChhHHHHHHhh--hcCCCccc-cccccccc--CCHHHHHHHHhhhcCCCccccc
Q psy6556         408 YNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEIT--HSKTLKFP-CINCGKYF--TKLEYMIKHMKRHFNTNKPVCE  482 (836)
Q Consensus       408 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~  482 (836)
                      ..|..|+++|++++||.|++|++.|.+...|..|+++  |.+..++. |++|++.|  .....|..|++.|.++++|.|+
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            4455666666666666666666666666666666665  44443332 55555444  4444444444444444444444


Q ss_pred             cchhcccChHHHHHHHhhhc
Q psy6556         483 ICSQTMAHNQVLQRHMTLHF  502 (836)
Q Consensus       483 ~C~~~f~~~~~l~~H~~~h~  502 (836)
                      +|++.|.....|..|++.|+
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTT
T ss_pred             CCCCccCCHHHHHHHHHHhC
Confidence            44444444444444444443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.5e-16  Score=132.15  Aligned_cols=88  Identities=26%  Similarity=0.441  Sum_probs=61.9

Q ss_pred             cCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCCCCccccCccchhcccch
Q psy6556         712 LKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKK  791 (836)
Q Consensus       712 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~~~~  791 (836)
                      .++++|.|++|++.|.+...|..|+++|+  ++++|.|++|++.|.....|..|+++|.++. +.+|+|++|+++|.++.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~~~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHS--GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV-GKPYICQSCGKGFSRPD   79 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSC--SSCSEECSSSCCEESCHHHHHHHHHHHCCCC-CSSBCCSSSCCCBSSHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcC--CCCCCcCCCCCCccCCHHHHHHHHHHhcCCC-CCceECCCccchhCCHH
Confidence            35677777777777777777777777765  3567777777777777777777777776642 12477777777777777


Q ss_pred             hHHHHHh-hcCC
Q psy6556         792 FLTRHMK-THLI  802 (836)
Q Consensus       792 ~L~~H~~-~h~~  802 (836)
                      .|..||+ .|.+
T Consensus        80 ~L~~H~~~~H~~   91 (95)
T 2yt9_A           80 HLNGHIKQVHSG   91 (95)
T ss_dssp             HHHHHHHHTSCC
T ss_pred             HHHHHHHHhcCC
Confidence            7777764 5654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.65  E-value=1.4e-16  Score=135.44  Aligned_cols=92  Identities=24%  Similarity=0.432  Sum_probs=76.9

Q ss_pred             CCCCccccCcchhhccChhHHHHHHhhhcCCCcccccccccccCCHHHHHHHHhhhcCCCccccccchhcccChHHHHHH
Q psy6556         418 TGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRH  497 (836)
Q Consensus       418 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  497 (836)
                      .++++|.|++|++.|.+...|..|+++|.++.+|.|++|++.|.....|..|++.|.++++|.|++|++.|.+...|..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            45677888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HhhhcCCCcccC
Q psy6556         498 MTLHFTQNKHPC  509 (836)
Q Consensus       498 ~~~h~~~~~~~C  509 (836)
                      ++.|.++++|..
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            888888887754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=1e-16  Score=136.43  Aligned_cols=95  Identities=24%  Similarity=0.338  Sum_probs=78.2

Q ss_pred             HhhhcCCCCccccCcchhhccChhHHHHHHhhhcCCCcccccccccccCCHHHHHHHHhhhcCCCccccccchhcccChH
Q psy6556         413 HMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQ  492 (836)
Q Consensus       413 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  492 (836)
                      +++.|+++++|.|++|++.|.+...|..|+++|.  ++|.|++|++.|.....|..|++ |.++++|.|++|++.|....
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHH
Confidence            4667788888888888888888888888888873  57888888888888888888885 88888888888888888888


Q ss_pred             HHHHHHh-hhcCCCcccCc
Q psy6556         493 VLQRHMT-LHFTQNKHPCN  510 (836)
Q Consensus       493 ~l~~H~~-~h~~~~~~~C~  510 (836)
                      .|..|++ .|.++++|.|.
T Consensus        84 ~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           84 SIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHcCCCCCCCCC
Confidence            8888886 78888887764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=4.9e-17  Score=138.37  Aligned_cols=81  Identities=23%  Similarity=0.405  Sum_probs=39.4

Q ss_pred             HhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCCCCccccCccchhccc
Q psy6556         710 KHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRI  789 (836)
Q Consensus       710 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~~  789 (836)
                      .|.++++|.|++|++.|.....|..|+++|    +++|.|++|++.|.....|..|++ |.+++   +|+|++|++.|.+
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H----~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~---~~~C~~C~~~f~~   81 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLC----RNAAVCPYCSLRFFSPELKQEHES-KCEYK---KLTCLECMRTFKS   81 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHH----HHSBCCTTTCCCBSSHHHHHHHHH-HCSTG---GGEEGGGTEECSS
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHC----CCCccCCCCCCccCCHHHHHHHHH-cCCCC---CccCccccchhCC
Confidence            344445555555555555555555555443    134555555555555555555543 44433   2455555555555


Q ss_pred             chhHHHHHh
Q psy6556         790 KKFLTRHMK  798 (836)
Q Consensus       790 ~~~L~~H~~  798 (836)
                      +..|..||+
T Consensus        82 ~~~L~~H~~   90 (107)
T 1wjp_A           82 SFSIWRHQV   90 (107)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            555555554

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=5.7e-17  Score=138.93  Aligned_cols=86  Identities=24%  Similarity=0.471  Sum_probs=42.9

Q ss_pred             hcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCCCCccccCccchhcccc
Q psy6556         711 HLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIK  790 (836)
Q Consensus       711 h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~~~  790 (836)
                      |+++++|.| +|++.|.+...|..|+++|+  ++++|.|++|++.|.....|..|+++|.+++   +|+|++|+++|.++
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~---~~~C~~C~~~f~~~   78 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHL--GLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK---PYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHS--CCCSEECTTTSCEESSSHHHHHHHTTTCCCC---CEECSSSCCEESCH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcC--CCcCccCCCCCcccCCHHHHHHHHHHcCCCC---CeeCCCCcchhcCH
Confidence            344455555 45555555555555555444  2344555555555555555555555554433   25555555555555


Q ss_pred             hhHHHHHhhcCC
Q psy6556         791 KFLTRHMKTHLI  802 (836)
Q Consensus       791 ~~L~~H~~~h~~  802 (836)
                      ..|..||++|.+
T Consensus        79 ~~l~~H~~~~~~   90 (110)
T 2csh_A           79 DSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHccc
Confidence            555555555443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.64  E-value=1.8e-16  Score=130.31  Aligned_cols=85  Identities=25%  Similarity=0.611  Sum_probs=45.4

Q ss_pred             CCccccC--cchhhccChhHHHHHHhhhcCCCcccccccccccCCHHHHHHHHhhhcCCCccccccchhcccChHHHHHH
Q psy6556         420 FKPYQCK--TCNASYASMRVLQHHEITHSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRH  497 (836)
Q Consensus       420 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  497 (836)
                      ++||.|+  .|++.|.+...|..|+++|.++.+|.|+.|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            3455554  35555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             HhhhcCC
Q psy6556         498 MTLHFTQ  504 (836)
Q Consensus       498 ~~~h~~~  504 (836)
                      +++|+++
T Consensus        82 ~~~H~~~   88 (90)
T 1a1h_A           82 TKIHLRQ   88 (90)
T ss_dssp             HGGGGC-
T ss_pred             HHHhccc
Confidence            5555543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.63  E-value=5.3e-17  Score=118.77  Aligned_cols=58  Identities=29%  Similarity=0.564  Sum_probs=55.6

Q ss_pred             CCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCc
Q psy6556         597 DRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDH  654 (836)
Q Consensus       597 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  654 (836)
                      |+||.|++||++|.+.+.|..|+++|+|++||+|++|+++|...++|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7899999999999999999999999999999999999999999999999999998864

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.60  E-value=4.5e-16  Score=113.79  Aligned_cols=54  Identities=33%  Similarity=0.612  Sum_probs=21.0

Q ss_pred             CcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhc
Q psy6556         715 RRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHM  770 (836)
Q Consensus       715 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~  770 (836)
                      |||+|++||+.|...+.|..|+++|.  ++++|.|++||+.|...+.|..|+++|+
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht--~ekp~~C~~C~k~F~~~~~L~~H~~~Ht   56 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHL--GYRPRSCPECGKCFRDQSEVNRHLKVHQ   56 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHH--TCCCEECTTTCCEESSHHHHHHHGGGGS
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhC--CCcCeECCCCCCCcCCHHHHHHHhCccC
Confidence            33333333333333333333333333  2333333333333333333333433333

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.60  E-value=8.8e-17  Score=131.12  Aligned_cols=82  Identities=23%  Similarity=0.414  Sum_probs=55.2

Q ss_pred             CCcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHH
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHV  766 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~  766 (836)
                      +||.|++|++.|.+.+.|..|++.|++++||.|++|++.|...+.|..|++++|   +.+|.|+.|++.|.....|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~---~~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH---ILPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC---CCcchHHHHHHHHHHHhhhHHHH
Confidence            466677777777777777777777776667777777777777777777766665   25666666666666666666666


Q ss_pred             Hhhcc
Q psy6556         767 SVHME  771 (836)
Q Consensus       767 ~~H~~  771 (836)
                      +.+.+
T Consensus        79 ~~~h~   83 (88)
T 1llm_C           79 ARLKK   83 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            65543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.59  E-value=6.7e-16  Score=126.47  Aligned_cols=81  Identities=23%  Similarity=0.566  Sum_probs=45.5

Q ss_pred             CCccccc--chHhhhchhHHHHHHHHhcCcCcccCC--cccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhh
Q psy6556         687 APAKCKI--CNQSFALFSNLNAHYNKHLKVRRFSCT--NCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDY  762 (836)
Q Consensus       687 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l  762 (836)
                      ++|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|+  ++++|.|++|++.|.....|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT--GHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHH--CCCCEECSSSSCEESSHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcC--CCCCccCCCCCcccCCHHHH
Confidence            3455555  666665555555555555555555554  35555555555555555554  24455555555555555555


Q ss_pred             hhHHHhh
Q psy6556         763 TNHVSVH  769 (836)
Q Consensus       763 ~~H~~~H  769 (836)
                      ..|+++|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            5555554

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.58  E-value=1.8e-15  Score=127.10  Aligned_cols=82  Identities=24%  Similarity=0.530  Sum_probs=56.7

Q ss_pred             CCccccc--chHhhhchhHHHHHHHHhcCcCcccCC--cccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhh
Q psy6556         687 APAKCKI--CNQSFALFSNLNAHYNKHLKVRRFSCT--NCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDY  762 (836)
Q Consensus       687 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l  762 (836)
                      ++|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|+++|+  ++++|.|++|++.|.....|
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT--GAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHT--SCCSCBCSSSCCBCSSHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhC--CCCCeECCCCcCccCCHHHH
Confidence            5667775  777777777777777777777777774  47777777777777776665  35666777777777766777


Q ss_pred             hhHHHhhc
Q psy6556         763 TNHVSVHM  770 (836)
Q Consensus       763 ~~H~~~H~  770 (836)
                      ..|+++|.
T Consensus        92 ~~H~~~H~   99 (100)
T 2ebt_A           92 ALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            77766664

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.58  E-value=1.4e-16  Score=129.82  Aligned_cols=81  Identities=19%  Similarity=0.387  Sum_probs=54.6

Q ss_pred             cCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCCCCccccCccchhcccchhH
Q psy6556         714 VRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFL  793 (836)
Q Consensus       714 ~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~~~~~L  793 (836)
                      ++||.|++|++.|.+.+.|..|+++|+  ++++|.|++|++.|.....|..|+++|.+.    +|.|+.|++.|.++..|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~----~~~c~~C~~~f~~~~~L   74 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHT--GEKPFACDICGRKFARSDERKRHRDIQHIL----PILEDKVEELLSKNYHL   74 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH--CCCCEECTTTCCEESSHHHHHHHHHHHTHH----HHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcC--CCCCccCCCCCCccCCHHHHHHHHHHhCCC----cchHHHHHHHHHHHhhh
Confidence            356777777777777777777777665  356677777777777777777777766542    36677777777777777


Q ss_pred             HHHHhhc
Q psy6556         794 TRHMKTH  800 (836)
Q Consensus       794 ~~H~~~h  800 (836)
                      ..|++.+
T Consensus        75 ~~H~~~~   81 (88)
T 1llm_C           75 ENEVARL   81 (88)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7776654

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.57  E-value=2e-15  Score=123.58  Aligned_cols=83  Identities=29%  Similarity=0.584  Sum_probs=66.5

Q ss_pred             cCcccCCc--ccccccCchhHHHHHHhhcCCCCCceecC--cccccccchhhhhhHHHhhcccCCCCccccCccchhccc
Q psy6556         714 VRRFSCTN--CSLNFTYLSNLIRHRRIKHSQHEGKYVCN--YCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRI  789 (836)
Q Consensus       714 ~~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~~  789 (836)
                      .++|.|++  |++.|.+...|..|+++|+  ++++|.|+  .|++.|.....|..|+++|.+++   +|+|++|+++|.+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~---~~~C~~C~~~f~~   77 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHT--GEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR---PFQCQKCDRAFSR   77 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSC--SSCCEECCSTTTCCEESSHHHHHHHHHHHHCCC---CEECSSSSCEESS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcC--CCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCC---CccCCCCCcccCC
Confidence            46788888  8888888888888888776  46788886  48888888888888888887765   4888888888888


Q ss_pred             chhHHHHHhhcC
Q psy6556         790 KKFLTRHMKTHL  801 (836)
Q Consensus       790 ~~~L~~H~~~h~  801 (836)
                      +..|..||++|.
T Consensus        78 ~~~l~~H~~~H~   89 (89)
T 2wbs_A           78 SDHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHHGGGGC
T ss_pred             HHHHHHHHHhhC
Confidence            888888888773

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.5e-15  Score=128.55  Aligned_cols=87  Identities=25%  Similarity=0.448  Sum_probs=61.5

Q ss_pred             hhcCCCcccccccccccCCHHHHHHHHhhhcCCCccccccchhcccChHHHHHHHhhhcCCCcccCccccccccChHHHH
Q psy6556         444 THSKTLKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICSQTMAHNQVLQRHMTLHFTQNKHPCNRCNASFSSMVQLS  523 (836)
Q Consensus       444 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  523 (836)
                      .|+++++|.| .|++.|.+...|..|++.|.+.++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            3556666666 666666666666666666666666777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHhC
Q psy6556         524 CHQIRAHG  531 (836)
Q Consensus       524 ~H~~~~h~  531 (836)
                      .|++.++.
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            77777664

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.56  E-value=3.8e-15  Score=125.05  Aligned_cols=85  Identities=31%  Similarity=0.489  Sum_probs=64.0

Q ss_pred             CcCcccCCc--ccccccCchhHHHHHHhhcCCCCCceecC--cccccccchhhhhhHHHhhcccCCCCccccCccchhcc
Q psy6556         713 KVRRFSCTN--CSLNFTYLSNLIRHRRIKHSQHEGKYVCN--YCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFR  788 (836)
Q Consensus       713 ~~~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~  788 (836)
                      ..++|.|++  |++.|.....|..|+++|+  ++++|.|+  .|++.|.....|..|+++|.+++   +|+|++|+++|.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~---~~~C~~C~~~f~   86 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHT--GEKPYKCTWEGCDWRFARSDELTRHYRKHTGAK---PFQCGVCNRSFS   86 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHS--CCCCEECCSSSCCCEESSHHHHHHHHHHHTSCC---SCBCSSSCCBCS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhC--CCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCC---CeECCCCcCccC
Confidence            356778875  8888888888888887766  36678885  58888888888888888877665   377888888888


Q ss_pred             cchhHHHHHhhcCC
Q psy6556         789 IKKFLTRHMKTHLI  802 (836)
Q Consensus       789 ~~~~L~~H~~~h~~  802 (836)
                      ++..|..||++|++
T Consensus        87 ~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           87 RSDHLALHMKRHQN  100 (100)
T ss_dssp             SHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHhCC
Confidence            88888888777753

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.55  E-value=1.4e-15  Score=134.49  Aligned_cols=81  Identities=21%  Similarity=0.290  Sum_probs=56.0

Q ss_pred             CCcccccchHhhh------chhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchh
Q psy6556         687 APAKCKICNQSFA------LFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKR  760 (836)
Q Consensus       687 ~~~~C~~C~~~f~------~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~  760 (836)
                      +++.|++|++.|.      ..+.|..|+ .|++++||.|++||+.|...+.|..|+++|    +++|.|++||+.|....
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H----~~~~~C~~C~k~f~~~~  114 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT----EHTKVCPVCKKEFTSTD  114 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT----CCCCBCTTTCCBCSSHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC----CCCCCCCCCCcccCCHH
Confidence            4577888888877      445555555 566777777777777777777777777665    45677777777777777


Q ss_pred             hhhhHHHhhccc
Q psy6556         761 DYTNHVSVHMER  772 (836)
Q Consensus       761 ~l~~H~~~H~~~  772 (836)
                      .|..|+++|++.
T Consensus       115 ~l~~H~~~h~~~  126 (129)
T 2wbt_A          115 SALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHHCCc
Confidence            777777776653

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.54  E-value=3.2e-15  Score=121.22  Aligned_cols=77  Identities=25%  Similarity=0.488  Sum_probs=46.1

Q ss_pred             Cccc--ccchHhhhchhHHHHHHHHhcCcCcccCCc--ccccccCchhHHHHHHhhcCCCCCceecCc---ccccccchh
Q psy6556         688 PAKC--KICNQSFALFSNLNAHYNKHLKVRRFSCTN--CSLNFTYLSNLIRHRRIKHSQHEGKYVCNY---CGKSYIDKR  760 (836)
Q Consensus       688 ~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~---C~~~f~~~~  760 (836)
                      ||.|  ++||+.|.+.+.|..|++.|++++||+|++  |++.|.+...|..|+++|++     |.|++   |++.|....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHH
Confidence            3556  556666666666666666666666666655  66666666666666655542     55665   666666666


Q ss_pred             hhhhHHHhh
Q psy6556         761 DYTNHVSVH  769 (836)
Q Consensus       761 ~l~~H~~~H  769 (836)
                      .|..|+++|
T Consensus        76 ~l~~H~~~h   84 (85)
T 2j7j_A           76 LYLKHVAEC   84 (85)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhc
Confidence            666665554

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.52  E-value=1e-14  Score=118.17  Aligned_cols=77  Identities=22%  Similarity=0.423  Sum_probs=51.8

Q ss_pred             cccC--CcccccccCchhHHHHHHhhcCCCCCceecCc--ccccccchhhhhhHHHhhcccCCCCccccCc---cchhcc
Q psy6556         716 RFSC--TNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNY--CGKSYIDKRDYTNHVSVHMERKSGYTQRCHK---CNATFR  788 (836)
Q Consensus       716 ~~~C--~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~---C~~~F~  788 (836)
                      ||.|  ++|++.|.+.+.|..|+++|+  ++++|+|++  |++.|.+...|..|+++|.+      |.|++   |++.|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------~~C~~~~~C~~~f~   72 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT--QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG------YPCKKDDSCSFVGK   72 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH--TTCCEECCSTTCCCEESSHHHHHHHHHHHHS------EECCSCSSCCCEES
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC--CCCCeeCCCCCCcCccCCHHHHHHHHHHhCC------CCCCCCCCCCCccC
Confidence            4666  667777777777777776665  356677766  77777777777777766654      56666   666666


Q ss_pred             cchhHHHHHhhc
Q psy6556         789 IKKFLTRHMKTH  800 (836)
Q Consensus       789 ~~~~L~~H~~~h  800 (836)
                      +.+.|..|+++|
T Consensus        73 ~~~~l~~H~~~h   84 (85)
T 2j7j_A           73 TWTLYLKHVAEC   84 (85)
T ss_dssp             SHHHHHHHHHHC
T ss_pred             CHHHHHHHHHhc
Confidence            666666666665

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=5e-15  Score=120.31  Aligned_cols=82  Identities=16%  Similarity=0.352  Sum_probs=60.9

Q ss_pred             HHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCC--CCceecCcccccccchhhhhhHHHhhcccCCCCcccc
Q psy6556         703 NLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQH--EGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRC  780 (836)
Q Consensus       703 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C  780 (836)
                      +|..|+++|++++||.|++|++.|.....|..|+++++...  +++|.|++|++.|.....|..|+++|.++++   +.|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~---~~~   78 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG---VEG   78 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS---CCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC---ccc
Confidence            35567778888888888888888888888888887776532  2678888888888888888888888777653   677


Q ss_pred             Cccchhc
Q psy6556         781 HKCNATF  787 (836)
Q Consensus       781 ~~C~~~F  787 (836)
                      ..|+.+|
T Consensus        79 ~~~~~~~   85 (86)
T 1x6h_A           79 ENSGPSS   85 (86)
T ss_dssp             CCCCCCC
T ss_pred             CCCCCCC
Confidence            7777655

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.46  E-value=5.2e-15  Score=130.77  Aligned_cols=113  Identities=13%  Similarity=0.186  Sum_probs=67.6

Q ss_pred             hcCcCcccCCcccccccCchhHHHHHHhhcC-CCCCceecCccccccc------chhhhhhHHHhhcccCCCCccccCcc
Q psy6556         711 HLKVRRFSCTNCSLNFTYLSNLIRHRRIKHS-QHEGKYVCNYCGKSYI------DKRDYTNHVSVHMERKSGYTQRCHKC  783 (836)
Q Consensus       711 h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~-~~~~~~~C~~C~~~f~------~~~~l~~H~~~H~~~~~~~~~~C~~C  783 (836)
                      +.|+++|.|...+...  ...+..+++.+.. ..++.+.|++|++.|.      ....|..|+ +|.+++   +|.|++|
T Consensus         7 ~~~~k~~~~~~k~~~~--~~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~---~~~C~~C   80 (129)
T 2wbt_A            7 DSGSKKYLSNHKGIFI--HVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAIS---QFVCPLC   80 (129)
T ss_dssp             CTTCCGGGGCSSCEEE--ECCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHC---SEECTTT
T ss_pred             cccccccccccCCeee--eecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCC---CeECCCC
Confidence            4556666665544322  2223333222211 0134566666666555      344444454 566655   3777777


Q ss_pred             chhcccchhHHHHHhhcCCCccCCccchhcccchhhhhccccccCC
Q psy6556         784 NATFRIKKFLTRHMKTHLIQYRCTRCNKTFKQNTSFIRHSLKHFNS  829 (836)
Q Consensus       784 ~~~F~~~~~L~~H~~~h~~~~~C~~C~~~f~~~~~l~~H~~~H~~~  829 (836)
                      |++|.++..|..|+++|..||.|++||++|.+.+.|++|+++|++.
T Consensus        81 ~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           81 LMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            7777777777777777766777777777777777777777777765

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.3e-14  Score=114.63  Aligned_cols=67  Identities=27%  Similarity=0.497  Sum_probs=63.6

Q ss_pred             hhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccc
Q psy6556         592 RIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC  658 (836)
Q Consensus       592 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  658 (836)
                      ..+.+++||.|++|++.|.+...|..|+++|++++||+|++|++.|.....|..|+++|++++||+|
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3456789999999999999999999999999999999999999999999999999999999999987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=4.1e-14  Score=112.61  Aligned_cols=67  Identities=27%  Similarity=0.683  Sum_probs=33.4

Q ss_pred             Cccccc--chHhhhchhHHHHHHH-HhcCcCcccCCc--ccccccCchhHHHHHHhhcCCCCCceecCcccccc
Q psy6556         688 PAKCKI--CNQSFALFSNLNAHYN-KHLKVRRFSCTN--CSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSY  756 (836)
Q Consensus       688 ~~~C~~--C~~~f~~~~~L~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f  756 (836)
                      +|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|+  ++++|.|++||+.|
T Consensus         7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS--DTRDYICEFSGPSS   78 (79)
T ss_dssp             SEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHH--TSCCCSCCSSSCCC
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhC--CCCCeeCCCCCCCC
Confidence            444443  5555555555555554 355555555554  5555555555555555444  24445555555444

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=4.9e-14  Score=114.38  Aligned_cols=78  Identities=27%  Similarity=0.455  Sum_probs=47.2

Q ss_pred             HHHHhhhcCCCCccccCcchhhccChhHHHHHHhhhcCC----CcccccccccccCCHHHHHHHHhhhcCCCccccccch
Q psy6556         410 YFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKT----LKFPCINCGKYFTKLEYMIKHMKRHFNTNKPVCEICS  485 (836)
Q Consensus       410 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  485 (836)
                      |..|+++|++++||.|++|++.|.+...|..|+++|+..    .+|.|++|++.|.....|..|+++|+++.++.|+.|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            455666666666666666666666666666666655443    4556666665555555555555555555555555555


Q ss_pred             hc
Q psy6556         486 QT  487 (836)
Q Consensus       486 ~~  487 (836)
                      ..
T Consensus        83 ~~   84 (86)
T 1x6h_A           83 PS   84 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=9.9e-14  Score=110.37  Aligned_cols=72  Identities=22%  Similarity=0.484  Sum_probs=45.6

Q ss_pred             cCcCcccCCc--ccccccCchhHHHHHHhhcCCCCCceecCc--ccccccchhhhhhHHHhhcccCCCCccccCccchhc
Q psy6556         712 LKVRRFSCTN--CSLNFTYLSNLIRHRRIKHSQHEGKYVCNY--CGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATF  787 (836)
Q Consensus       712 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F  787 (836)
                      +++++|.|+.  |++.|.+...|..|++..|. ++++|.|++  |++.|..+..|..|+++|.+++   +|+|++||++|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~---~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-HQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR---DYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG-SCCCEECSCTTTCCEESSHHHHHHHHHHHHTSC---CCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC-CCCCeECCCCCCcCccCCHHHHHHHHHHhCCCC---CeeCCCCCCCC
Confidence            3556666665  77777777777777663222 356666766  7766666666666666666654   36666666666

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=2.2e-14  Score=119.13  Aligned_cols=77  Identities=16%  Similarity=0.176  Sum_probs=71.2

Q ss_pred             ccchhhhhhhhhhcCCCCcccccchHhhc-CchhHHhhhhhcCC-CccccCCccchhhcchhhHHHHhhhhccCccccc
Q psy6556         582 DSKTNFNIHMRIHGKDRPFSCLLCNNTFA-QLSTLLNHERIHDN-HKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC  658 (836)
Q Consensus       582 ~~~~~l~~h~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~H~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  658 (836)
                      .....+..|+++|+++++|.|++|++.|. +...|..|+++|++ ++||+|++|++.|.....|..|+++|+++++..-
T Consensus         7 ~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A            7 GPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             CCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            44566788999999999999999999999 99999999999999 9999999999999999999999999999988643

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=4.7e-14  Score=117.12  Aligned_cols=76  Identities=14%  Similarity=0.196  Sum_probs=59.1

Q ss_pred             hhchhHHHHHHHHhcCcCcccCCccccccc-CchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCC
Q psy6556         698 FALFSNLNAHYNKHLKVRRFSCTNCSLNFT-YLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKS  774 (836)
Q Consensus       698 f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~  774 (836)
                      +...+.+..|++.|.++++|.|++|++.|. ....|..|+++|++ .+++|.|++|++.|..+..|..|+++|+++++
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~-~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQK-LQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHH-HHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcC-CCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            445566778888888888888888888888 88888888887763 15678888888888888888888888877664

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=5.2e-14  Score=115.73  Aligned_cols=70  Identities=17%  Similarity=0.329  Sum_probs=64.5

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhh-hc---CCCccccCCccchhhcchhhHHHH-hhhhccCccccccCCCc
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHER-IH---DNHKPYKCTKCNYSARVLSNKLAH-ERIYHQDHVFKCHINNC  663 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~c~c  663 (836)
                      .+|++||.|++|++.|.+++.|..|++ +|   ++++||+|+.|+++|...+.|..| +++|.+++||.|.++..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            368999999999999999999999998 59   678999999999999999999999 89999999999987443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.39  E-value=9.6e-14  Score=108.62  Aligned_cols=64  Identities=27%  Similarity=0.614  Sum_probs=61.0

Q ss_pred             hhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccc
Q psy6556         593 IHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVF  656 (836)
Q Consensus       593 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  656 (836)
                      .+.++++|.|++|++.|.+...|..|+++|++++||+|++|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4567899999999999999999999999999999999999999999999999999999999876

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=6.4e-14  Score=110.65  Aligned_cols=69  Identities=20%  Similarity=0.341  Sum_probs=49.9

Q ss_pred             HHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhccc
Q psy6556         704 LNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMER  772 (836)
Q Consensus       704 L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~  772 (836)
                      |..|++.|++++||.|++|++.|.+...|..|++.+|...+++|+|++|++.|.....|..|+++|++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            445777777777888888888888888888887755543346777777777777777777777765543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=3.7e-13  Score=110.48  Aligned_cols=73  Identities=19%  Similarity=0.284  Sum_probs=55.5

Q ss_pred             hhhchhHHHHHHHHhcCcCcccCCcccccc-cCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhH-HHhhccc
Q psy6556         697 SFALFSNLNAHYNKHLKVRRFSCTNCSLNF-TYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNH-VSVHMER  772 (836)
Q Consensus       697 ~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f-~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H-~~~H~~~  772 (836)
                      +|...+.|..|++.|.++++|.|++|++.| .+...|..|+++|   ++++|.|++||+.|..+..|..| +++|.++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h---~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC---KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH---CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH---CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            456677777888888777888888888888 7888888887776   36777888888888777778778 7777653

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=9e-14  Score=108.04  Aligned_cols=64  Identities=33%  Similarity=0.731  Sum_probs=60.4

Q ss_pred             hhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCc
Q psy6556         591 MRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDH  654 (836)
Q Consensus       591 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  654 (836)
                      .++|++++||.|++|++.|.+...|..|+++|++++||+|++|++.|.....|..|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4678999999999999999999999999999999999999999999999999999999998764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2.7e-13  Score=111.47  Aligned_cols=60  Identities=17%  Similarity=0.288  Sum_probs=24.1

Q ss_pred             CcCcccCCcccccccCchhHHHHHHh-hcC-CCCCceecCcccccccchhhhhhH-HHhhccc
Q psy6556         713 KVRRFSCTNCSLNFTYLSNLIRHRRI-KHS-QHEGKYVCNYCGKSYIDKRDYTNH-VSVHMER  772 (836)
Q Consensus       713 ~~~~~~C~~C~~~f~~~~~L~~H~~~-~h~-~~~~~~~C~~C~~~f~~~~~l~~H-~~~H~~~  772 (836)
                      |++||.|++||+.|...+.|..|+++ |.+ .++++|.|++||+.|..++.|..| +++|.++
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htge   77 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE   77 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCC
Confidence            33444444444444444444444432 211 123344444444444444444444 3444433

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2e-13  Score=112.07  Aligned_cols=75  Identities=13%  Similarity=0.100  Sum_probs=67.3

Q ss_pred             cccchhhhhhhhhhcCCCCcccccchHhh-cCchhHHhhhhhcCCCccccCCccchhhcchhhHHHH-hhhhccCccc
Q psy6556         581 MDSKTNFNIHMRIHGKDRPFSCLLCNNTF-AQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAH-ERIYHQDHVF  656 (836)
Q Consensus       581 ~~~~~~l~~h~~~h~~~~~~~C~~C~~~f-~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~  656 (836)
                      +.....|..|++++.+++||.|++|++.| .+...|..|+++| +++||.|++|++.|...+.|..| +++|.+...|
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           16 YAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             SCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            35667788999999999999999999999 9999999999999 99999999999999999999999 8877654433

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=1.7e-13  Score=105.84  Aligned_cols=63  Identities=29%  Similarity=0.546  Sum_probs=60.0

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccc
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVF  656 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  656 (836)
                      |++++||.|++|++.|.+...|..|+++|++++||+|++|++.|.....|..|+++|+++++.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            578899999999999999999999999999999999999999999999999999999998764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=1.1e-12  Score=103.60  Aligned_cols=63  Identities=27%  Similarity=0.509  Sum_probs=57.3

Q ss_pred             ccccCCCccccccccccccCHHHHHHHHhhhcCCcceecccccccccChHHHHHHHHhhccCC
Q psy6556          13 HESQDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSN   75 (836)
Q Consensus        13 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   75 (836)
                      ......++|.|++|++.|.+...|..|+++|++++||.|++|++.|.....|..|++..|..+
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            345577899999999999999999999999999999999999999999999999998788754

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=3.9e-13  Score=104.42  Aligned_cols=63  Identities=27%  Similarity=0.587  Sum_probs=44.5

Q ss_pred             HHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccC
Q psy6556         709 NKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERK  773 (836)
Q Consensus       709 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~  773 (836)
                      +.|.+++||.|++|++.|.....|..|+++|+  ++++|+|++|++.|.....|..|+++|.++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHT--GEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGG--CSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcC--CCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            45667777777777777777777777777665  3567777777777777777777777776654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=3.6e-13  Score=102.67  Aligned_cols=63  Identities=27%  Similarity=0.500  Sum_probs=42.5

Q ss_pred             HHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcc
Q psy6556         709 NKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHME  771 (836)
Q Consensus       709 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  771 (836)
                      +.|.+++||.|++|++.|.+.++|..|++++|..++++|.|++||+.|.....|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            346667777777777777777777777766553346667777777777777777777766653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.6e-13  Score=108.37  Aligned_cols=67  Identities=24%  Similarity=0.452  Sum_probs=57.6

Q ss_pred             hhhhhhhhcCCCCcccccchHhhcCchhHHhhhh-hcCCC-ccccCCccchhhcchhhHHHHhhhhccC
Q psy6556         587 FNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHER-IHDNH-KPYKCTKCNYSARVLSNKLAHERIYHQD  653 (836)
Q Consensus       587 l~~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~  653 (836)
                      +..|+++|++++||.|++|++.|.+...|..|++ .|.++ +||+|++|++.|.....|..|++.+|+.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            4568888999999999999999999999999987 67764 8899999999999999999999887764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=4.8e-13  Score=105.74  Aligned_cols=55  Identities=25%  Similarity=0.428  Sum_probs=44.9

Q ss_pred             CCcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcC
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHS  741 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~  741 (836)
                      ++|.|++||++|.+.+.|..|+++|++++||+|++|++.|.....|.+|++..|.
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            5678888888888888888888888888888888888888888888888766554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=3.3e-14  Score=111.23  Aligned_cols=72  Identities=15%  Similarity=0.181  Sum_probs=52.5

Q ss_pred             CchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCCCccccccchhHHHhhhhhcccCCCCCCcc
Q psy6556         611 QLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHSNESYAPAK  690 (836)
Q Consensus       611 ~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~c~~~~~~~~~l~~H~~~~~~~~~~~~~~  690 (836)
                      +.+.|..|+++|++++||.|++|++.|...+.|..                                        .++|.
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~----------------------------------------~~~~~   41 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR----------------------------------------RKTPM   41 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC----------------------------------------SSSCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc----------------------------------------CCCCC
Confidence            34567777777777777777777777776665443                                        15677


Q ss_pred             cccchHhhhchhHHHHHHHHhcCcCcccCCcc
Q psy6556         691 CKICNQSFALFSNLNAHYNKHLKVRRFSCTNC  722 (836)
Q Consensus       691 C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  722 (836)
                      |++||+.|.+.+.|..|++.|++++||.|++|
T Consensus        42 C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           42 CEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            77788888888888888777777777877776

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.32  E-value=2.8e-13  Score=99.77  Aligned_cols=57  Identities=30%  Similarity=0.471  Sum_probs=50.6

Q ss_pred             CCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhcc
Q psy6556         596 KDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQ  652 (836)
Q Consensus       596 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  652 (836)
                      +++||.|++|++.|.+...|..|+++|++++||.|+.|++.|.....|..|+++||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            467999999999999999999999999999999999999999999999999998874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.5e-12  Score=100.40  Aligned_cols=62  Identities=21%  Similarity=0.378  Sum_probs=38.7

Q ss_pred             hcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCC
Q psy6556         711 HLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKS  774 (836)
Q Consensus       711 h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~  774 (836)
                      |.++++|.|++|++.|.....|..|+++|+  ++++|+|++|++.|.....|..|+++|+++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHC--TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGC--CSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            445666666666666666666666666654  35566666666666666666666666665543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.6e-12  Score=102.55  Aligned_cols=58  Identities=29%  Similarity=0.564  Sum_probs=23.1

Q ss_pred             CcccccchHhhcChhhHHHHhhhcCCCCccccCcchhhccChhHHHHHHhhhcCCCcc
Q psy6556         394 PSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKTLKF  451 (836)
Q Consensus       394 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  451 (836)
                      +|.|++|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|++++||
T Consensus        18 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             SSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             CEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            3344444444444444444444443333343433333333333333333333333333

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=3e-13  Score=103.10  Aligned_cols=62  Identities=24%  Similarity=0.457  Sum_probs=57.1

Q ss_pred             hhhhcCCCCcccccchHhhcCchhHHhhhhh-c-CCCccccCCccchhhcchhhHHHHhhhhcc
Q psy6556         591 MRIHGKDRPFSCLLCNNTFAQLSTLLNHERI-H-DNHKPYKCTKCNYSARVLSNKLAHERIYHQ  652 (836)
Q Consensus       591 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  652 (836)
                      +++|++++||.|++|++.|.+.+.|..|+++ | .+++||.|+.|+++|...+.|..|++.+|+
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3568889999999999999999999999998 7 589999999999999999999999999886

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.29  E-value=1.2e-12  Score=96.36  Aligned_cols=54  Identities=22%  Similarity=0.423  Sum_probs=34.7

Q ss_pred             CCcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhc
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKH  740 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h  740 (836)
                      +||+|++|++.|.+.+.|..|++.|++++||.|++|++.|.....|..|++++|
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            456666666666666666666666666666666666666666666666666655

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=7e-14  Score=109.37  Aligned_cols=71  Identities=21%  Similarity=0.192  Sum_probs=66.3

Q ss_pred             chhhhhhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         584 KTNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       584 ~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +..|..|+++|.+++||.|++|++.|.+.+.|..       ++||.|+.|++.|...+.|..|+++|+++++|.|++|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            4567889999999999999999999999999988       7899999999999999999999999999999999874

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.27  E-value=1.1e-12  Score=96.51  Aligned_cols=56  Identities=29%  Similarity=0.541  Sum_probs=53.8

Q ss_pred             CcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCc
Q psy6556         599 PFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDH  654 (836)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  654 (836)
                      ||.|++|++.|.+.+.|..|+++|++++||.|+.|+++|...+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999999999999999999999999999999999998875

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.25  E-value=5.9e-12  Score=98.33  Aligned_cols=55  Identities=35%  Similarity=0.631  Sum_probs=21.7

Q ss_pred             CcccccchHhhcChhhHHHHhhhcCCCCccccCcchhhccChhHHHHHHhhhcCC
Q psy6556         394 PSICAVCGDTFKTNYNYFVHMRRHTGFKPYQCKTCNASYASMRVLQHHEITHSKT  448 (836)
Q Consensus       394 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  448 (836)
                      +|.|++|++.|.....|..|+++|+++++|+|++|++.|.+...|..|+++|+++
T Consensus        17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             SBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             CeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            3334444444444333444433333333333333333333333333333333333

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.25  E-value=3e-12  Score=94.13  Aligned_cols=53  Identities=30%  Similarity=0.537  Sum_probs=34.1

Q ss_pred             CcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhc
Q psy6556         688 PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKH  740 (836)
Q Consensus       688 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h  740 (836)
                      ||.|++||+.|.+.+.|..|++.|++++||.|++|++.|.+.+.|..|+++|+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhc
Confidence            45666666666666666666666666666666666666666666666666555

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=9.5e-12  Score=92.52  Aligned_cols=49  Identities=33%  Similarity=0.684  Sum_probs=27.8

Q ss_pred             CcccccchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHH
Q psy6556         688 PAKCKICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHR  736 (836)
Q Consensus       688 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  736 (836)
                      ||.|++|++.|.+.+.|..|++.|++++||.|++|++.|.+.+.|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            4555555555555555555555555555555555555555555555554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=3.1e-12  Score=101.22  Aligned_cols=63  Identities=21%  Similarity=0.275  Sum_probs=55.1

Q ss_pred             hhcCCCCcccccchHhhcCchhHHhhhhhcCC---CccccCCccchhhcchhhHHHHhhhhc-cCcc
Q psy6556         593 IHGKDRPFSCLLCNNTFAQLSTLLNHERIHDN---HKPYKCTKCNYSARVLSNKLAHERIYH-QDHV  655 (836)
Q Consensus       593 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~  655 (836)
                      .|++++||.|++|++.|.+...|..|+++|++   ++||.|++|++.|.....|..|++.+| ++.+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            36789999999999999999999999999986   899999999999999999999996554 4443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=7.6e-12  Score=97.46  Aligned_cols=65  Identities=23%  Similarity=0.443  Sum_probs=37.6

Q ss_pred             HHhhhhhcccCCCCCCcccc--cchHhhhchhHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhh
Q psy6556         673 LRRHRKIFHSNESYAPAKCK--ICNQSFALFSNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIK  739 (836)
Q Consensus       673 l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~  739 (836)
                      |..|+...+.++  ++|.|+  .|++.|.+.+.|..|++.|.++++|.|++|++.|...+.|.+|+++|
T Consensus         6 ~~~~~~~~~~~~--~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            6 MNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             --CTTSCCCCCC--CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccchhhccCCCC--CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            344444444444  556665  36666666666666666666666666666666666666666666544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.8e-11  Score=89.94  Aligned_cols=57  Identities=32%  Similarity=0.713  Sum_probs=49.9

Q ss_pred             CccccccccccccCHHHHHHHHhhhcCCcceecccccccccChHHHHHHHHhhccCC
Q psy6556          19 RTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQFFLDLGRLNAHIRQRHTSN   75 (836)
Q Consensus        19 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   75 (836)
                      +||.|++|++.|.+...|..|+++|.+++||.|++|++.|.+...|..|++..|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            579999999999999999999999999999999999999999999999986566543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.5e-11  Score=97.18  Aligned_cols=65  Identities=22%  Similarity=0.358  Sum_probs=52.1

Q ss_pred             hcCCCceeccccccccCCcchHHHHHHHhCC---CCCcccCcCCCcccChhhhhhhhhccCCCCCccc
Q psy6556         140 HLNIKPYACKYCGNAFAHKSSRDAHQNIHTD---LKPYLCLTCGQSFRTFNLMKRHNLCDHQDVRNYL  204 (836)
Q Consensus       140 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  204 (836)
                      |++++||.|++|++.|.....|..|+++|++   +++|.|.+|++.|.....|.+|++..|.+..+..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            6678888888888888888888888888875   7788888888888888888888877677666543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.14  E-value=1.4e-11  Score=95.92  Aligned_cols=55  Identities=27%  Similarity=0.645  Sum_probs=32.2

Q ss_pred             CCCceecC--cccccccchhhhhhHHHhhcccCCCCccccCccchhcccchhHHHHHhhc
Q psy6556         743 HEGKYVCN--YCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       743 ~~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~h  800 (836)
                      ++++|.|+  .|++.|.....|..|+++|.+++   +|+|++||++|.++..|..|+++|
T Consensus        16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~---~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           16 KMRPYACPVESCDRRFSRSDELTRHIRIHTGQK---PFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCEECSSTTBCCEESSHHHHHHHHHHHHCCC---CEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCccCCcCCCCCCccCCHHHHHHHHHhhCCCC---CeECCCCCchhCCHHHHHHHHHhc
Confidence            35556664  36666666666666666665544   266666666666666666666555

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.5e-11  Score=85.52  Aligned_cols=45  Identities=27%  Similarity=0.417  Sum_probs=33.5

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            356677777777777777777777777777777777777777766

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.10  E-value=1.2e-11  Score=86.20  Aligned_cols=45  Identities=27%  Similarity=0.406  Sum_probs=32.1

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.10  E-value=1.6e-11  Score=85.50  Aligned_cols=44  Identities=23%  Similarity=0.353  Sum_probs=31.1

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            55666777777777777777777777777777777777777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.6e-11  Score=85.43  Aligned_cols=45  Identities=24%  Similarity=0.479  Sum_probs=34.3

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777766

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.10  E-value=1.2e-11  Score=86.07  Aligned_cols=45  Identities=24%  Similarity=0.533  Sum_probs=30.4

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355666666667777777777777777777666666666666665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.6e-11  Score=85.42  Aligned_cols=45  Identities=31%  Similarity=0.493  Sum_probs=34.8

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366777777788888888888888888888888887788877776

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.09  E-value=1.8e-11  Score=85.15  Aligned_cols=45  Identities=24%  Similarity=0.468  Sum_probs=33.2

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356677777777777777777777777777777777777777766

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.6e-11  Score=85.47  Aligned_cols=44  Identities=27%  Similarity=0.434  Sum_probs=31.2

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56666777777777777777777777777777777777777665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2e-11  Score=85.02  Aligned_cols=45  Identities=24%  Similarity=0.424  Sum_probs=33.0

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777766

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.8e-11  Score=85.14  Aligned_cols=45  Identities=24%  Similarity=0.439  Sum_probs=32.4

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.3e-11  Score=84.65  Aligned_cols=44  Identities=27%  Similarity=0.508  Sum_probs=34.1

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777788888888777777777777777777777776

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.5e-11  Score=85.53  Aligned_cols=44  Identities=25%  Similarity=0.532  Sum_probs=29.5

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-11  Score=85.34  Aligned_cols=45  Identities=24%  Similarity=0.457  Sum_probs=34.9

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366777777788888888888888888888888888888887776

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.08  E-value=5.8e-11  Score=98.08  Aligned_cols=62  Identities=19%  Similarity=0.288  Sum_probs=42.1

Q ss_pred             CCcccccchHhhhchhHHHHHHHH-hcCcCc--------ccCCcccccccCchhHHHHHHhhcCCCCCceecC
Q psy6556         687 APAKCKICNQSFALFSNLNAHYNK-HLKVRR--------FSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCN  750 (836)
Q Consensus       687 ~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~  750 (836)
                      ..+.|++|++.|.+...|..|++. |.++++        |.|++|++.|.....|..|+++|+  ++++|+|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT--GEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHH--TCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcC--CCCCCCCC
Confidence            346677788888777778888776 777666        666666666666666666666655  35566664

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.6e-11  Score=85.39  Aligned_cols=45  Identities=27%  Similarity=0.446  Sum_probs=32.0

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=2.5e-11  Score=92.13  Aligned_cols=59  Identities=17%  Similarity=0.362  Sum_probs=54.4

Q ss_pred             cCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC-ccchhhcchhhHHHHhhhhccCcc
Q psy6556         595 GKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT-KCNYSARVLSNKLAHERIYHQDHV  655 (836)
Q Consensus       595 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  655 (836)
                      .+++||.|++|++.|. .+.|..|+++ ++++||+|+ .|+++|...+.|..|+++|.+..+
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4678999999999999 9999999999 999999999 999999999999999998876554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.1e-11  Score=84.86  Aligned_cols=45  Identities=29%  Similarity=0.508  Sum_probs=33.7

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356677777777777777777777777777777777777777766

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.4e-11  Score=84.52  Aligned_cols=44  Identities=25%  Similarity=0.462  Sum_probs=34.5

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777788888888888888888888888888888887776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.8e-11  Score=85.23  Aligned_cols=45  Identities=24%  Similarity=0.424  Sum_probs=32.7

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777766

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.2e-11  Score=84.68  Aligned_cols=44  Identities=18%  Similarity=0.323  Sum_probs=30.9

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55666677777777777777777777777777777777777665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-11  Score=85.34  Aligned_cols=45  Identities=24%  Similarity=0.493  Sum_probs=29.8

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355666666666666666666666666666666666666666655

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-11  Score=85.30  Aligned_cols=44  Identities=18%  Similarity=0.331  Sum_probs=29.6

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=1.6e-11  Score=84.51  Aligned_cols=44  Identities=27%  Similarity=0.500  Sum_probs=28.2

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34556666666666666666666666666666666666666655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=1.7e-11  Score=85.28  Aligned_cols=44  Identities=25%  Similarity=0.376  Sum_probs=30.8

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666667777777777777777777777777777777777665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.5e-11  Score=85.55  Aligned_cols=44  Identities=30%  Similarity=0.517  Sum_probs=28.7

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.3e-11  Score=84.59  Aligned_cols=45  Identities=29%  Similarity=0.505  Sum_probs=34.4

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777766

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1.6e-11  Score=85.40  Aligned_cols=45  Identities=20%  Similarity=0.289  Sum_probs=31.7

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356666777777777777777777777777777777777777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.7e-11  Score=85.32  Aligned_cols=44  Identities=25%  Similarity=0.522  Sum_probs=29.7

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666655

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.2e-11  Score=84.73  Aligned_cols=45  Identities=24%  Similarity=0.495  Sum_probs=30.9

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            355666667777777777777777777777777777777777665

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=2.2e-11  Score=84.69  Aligned_cols=44  Identities=20%  Similarity=0.389  Sum_probs=32.9

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777777766

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.8e-11  Score=85.26  Aligned_cols=45  Identities=22%  Similarity=0.331  Sum_probs=31.1

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            355666667777777777777777777777777777777777665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-11  Score=85.52  Aligned_cols=44  Identities=23%  Similarity=0.473  Sum_probs=29.0

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=5.6e-11  Score=98.14  Aligned_cols=62  Identities=16%  Similarity=0.218  Sum_probs=58.7

Q ss_pred             CCcccccchHhhcCchhHHhhhhh-cCCCcc--------ccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERI-HDNHKP--------YKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      ..|.|++|++.|.+...|..|+++ |.+++|        |.|++|++.|.....|..|+++|+++++|.|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            457899999999999999999998 999888        99999999999999999999999999999985

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-11  Score=85.59  Aligned_cols=44  Identities=32%  Similarity=0.501  Sum_probs=28.0

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.07  E-value=1.8e-11  Score=85.19  Aligned_cols=44  Identities=23%  Similarity=0.423  Sum_probs=27.6

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666654

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.6e-11  Score=85.44  Aligned_cols=44  Identities=23%  Similarity=0.475  Sum_probs=27.4

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-11  Score=86.17  Aligned_cols=44  Identities=23%  Similarity=0.388  Sum_probs=23.9

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|+++|.+.+.|..|+++|++++||+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-11  Score=85.98  Aligned_cols=44  Identities=25%  Similarity=0.419  Sum_probs=25.7

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555556666666666655566666555555555555554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.06  E-value=2.6e-11  Score=84.37  Aligned_cols=44  Identities=27%  Similarity=0.536  Sum_probs=30.6

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55666667777777777777777777777777777777777665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.5e-11  Score=84.46  Aligned_cols=45  Identities=16%  Similarity=0.355  Sum_probs=35.7

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            366777788888888888888888888888888888888888776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.4e-11  Score=84.48  Aligned_cols=44  Identities=20%  Similarity=0.511  Sum_probs=32.3

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777766

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.6e-11  Score=85.38  Aligned_cols=44  Identities=27%  Similarity=0.479  Sum_probs=26.1

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44555555666666666666666666666666666666666554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.7e-11  Score=85.33  Aligned_cols=44  Identities=27%  Similarity=0.579  Sum_probs=24.9

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.05  E-value=3.1e-11  Score=83.94  Aligned_cols=44  Identities=25%  Similarity=0.451  Sum_probs=31.7

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45667777777777777777777777777777777777777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=2.9e-11  Score=84.12  Aligned_cols=44  Identities=25%  Similarity=0.421  Sum_probs=31.8

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777765

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.2e-10  Score=88.37  Aligned_cols=54  Identities=20%  Similarity=0.428  Sum_probs=29.4

Q ss_pred             CcCcccCCcccccccCchhHHHHHHhhcCCCCCceecC-cccccccchhhhhhHHHhhc
Q psy6556         713 KVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCN-YCGKSYIDKRDYTNHVSVHM  770 (836)
Q Consensus       713 ~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~-~C~~~f~~~~~l~~H~~~H~  770 (836)
                      +++||.|++|++.|. .+.|..|+++ .  ++++|.|+ +||+.|..++.|..|+++|-
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~--~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-C--PRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-C--SSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-c--CCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            345555555555555 5555555554 2  35555555 55555555555555555553

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=2.4e-11  Score=84.57  Aligned_cols=44  Identities=30%  Similarity=0.504  Sum_probs=31.6

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=3.1e-11  Score=83.97  Aligned_cols=44  Identities=18%  Similarity=0.343  Sum_probs=30.1

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666677777777777777777777777776677766665

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.2e-11  Score=83.85  Aligned_cols=44  Identities=25%  Similarity=0.534  Sum_probs=29.1

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666654

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.7e-11  Score=83.51  Aligned_cols=45  Identities=24%  Similarity=0.465  Sum_probs=34.4

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhh-hcCCCccccCCcc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHER-IHDNHKPYKCTKC  633 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C  633 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|++ +|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            35667777777777777777777777777777 7777777777776

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=3.3e-11  Score=83.78  Aligned_cols=44  Identities=18%  Similarity=0.365  Sum_probs=27.8

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.99  E-value=1.8e-10  Score=80.01  Aligned_cols=45  Identities=13%  Similarity=0.166  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|+.|+++|...++|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            589999999999999999999999999999999999999999874

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=9.1e-11  Score=80.61  Aligned_cols=44  Identities=30%  Similarity=0.365  Sum_probs=39.1

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|..++.|..|+++|++++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678889999999999999999999999999999999999887

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=6.3e-11  Score=82.31  Aligned_cols=44  Identities=30%  Similarity=0.477  Sum_probs=26.9

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666543

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.99  E-value=1.1e-10  Score=81.06  Aligned_cols=44  Identities=27%  Similarity=0.460  Sum_probs=39.3

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|..++.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788888999999999999999999999999999999999887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.98  E-value=1.7e-10  Score=80.07  Aligned_cols=45  Identities=16%  Similarity=0.324  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +|+++|++++||+|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999874

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.9e-10  Score=79.86  Aligned_cols=45  Identities=20%  Similarity=0.243  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|++.|...++|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.2e-10  Score=81.02  Aligned_cols=44  Identities=27%  Similarity=0.346  Sum_probs=39.5

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|++++||.|++|++.|..++.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788889999999999999999999999999999999999887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=80.07  Aligned_cols=45  Identities=18%  Similarity=0.248  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +|+++|++++||+|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.4e-10  Score=80.60  Aligned_cols=45  Identities=13%  Similarity=0.239  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999874

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.97  E-value=1.9e-10  Score=79.93  Aligned_cols=45  Identities=18%  Similarity=0.245  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +|+++|++++||+|++|+++|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999874

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.97  E-value=1.9e-10  Score=79.83  Aligned_cols=45  Identities=18%  Similarity=0.205  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +|+++|++++||.|++|++.|...++|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=79.95  Aligned_cols=45  Identities=20%  Similarity=0.243  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|...++|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.5e-10  Score=80.37  Aligned_cols=45  Identities=36%  Similarity=0.457  Sum_probs=39.6

Q ss_pred             HHHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       135 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      +|+++|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=79.90  Aligned_cols=45  Identities=13%  Similarity=0.244  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +|+++|++++||+|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.2e-10  Score=79.60  Aligned_cols=45  Identities=20%  Similarity=0.248  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +|+++|++++||+|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=79.99  Aligned_cols=45  Identities=20%  Similarity=0.272  Sum_probs=42.8

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +|+++|++++||.|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=80.89  Aligned_cols=44  Identities=34%  Similarity=0.502  Sum_probs=39.3

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|..++.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788888999999999999999999999999999999999887

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.97  E-value=3.1e-11  Score=89.92  Aligned_cols=55  Identities=18%  Similarity=0.394  Sum_probs=43.0

Q ss_pred             hhhhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHH
Q psy6556         587 FNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKL  644 (836)
Q Consensus       587 l~~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~  644 (836)
                      |..|+++|++++||.|++|++.|.+.+.|.   ++|++++||+|++|+++|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            456777888888888888888888877776   7788888888888888887766644

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.2e-10  Score=79.54  Aligned_cols=45  Identities=20%  Similarity=0.270  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|...++|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.2e-10  Score=79.51  Aligned_cols=45  Identities=16%  Similarity=0.187  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.96  E-value=1.1e-10  Score=79.36  Aligned_cols=41  Identities=20%  Similarity=0.453  Sum_probs=24.7

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            34455566666666666666666666666666666666655

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=79.77  Aligned_cols=45  Identities=24%  Similarity=0.300  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=79.53  Aligned_cols=45  Identities=18%  Similarity=0.168  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.9e-10  Score=78.89  Aligned_cols=45  Identities=20%  Similarity=0.251  Sum_probs=42.5

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||.|++|+++|...++|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            488999999999999999999999999999999999999999874

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=79.69  Aligned_cols=45  Identities=22%  Similarity=0.254  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.4e-10  Score=80.54  Aligned_cols=45  Identities=36%  Similarity=0.513  Sum_probs=39.4

Q ss_pred             HHHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       135 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      .|+++|.+++||.|++|++.|..++.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366788888999999999999999999999999999999999877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.4e-10  Score=80.49  Aligned_cols=44  Identities=30%  Similarity=0.481  Sum_probs=39.2

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|..++.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            66778888999999999999999999999999999999999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=79.76  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +|+++|++++||.|++|+++|...++|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2e-10  Score=79.70  Aligned_cols=45  Identities=16%  Similarity=0.183  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +|+++|++++||+|++|+++|...++|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=79.72  Aligned_cols=45  Identities=22%  Similarity=0.269  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=79.55  Aligned_cols=45  Identities=22%  Similarity=0.318  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=79.27  Aligned_cols=45  Identities=18%  Similarity=0.285  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.4e-10  Score=80.61  Aligned_cols=42  Identities=29%  Similarity=0.547  Sum_probs=26.6

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=79.79  Aligned_cols=45  Identities=20%  Similarity=0.258  Sum_probs=42.7

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.96  E-value=2.6e-10  Score=79.22  Aligned_cols=45  Identities=24%  Similarity=0.349  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=80.80  Aligned_cols=42  Identities=29%  Similarity=0.517  Sum_probs=25.2

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            455555666666666666666666666666666666666554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=1.4e-10  Score=83.72  Aligned_cols=47  Identities=21%  Similarity=0.493  Sum_probs=42.2

Q ss_pred             hhcCCCCcccccchHhhcCchhHHhhhh-hcCCCccccCCccchhhcc
Q psy6556         593 IHGKDRPFSCLLCNNTFAQLSTLLNHER-IHDNHKPYKCTKCNYSARV  639 (836)
Q Consensus       593 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~  639 (836)
                      .+++++||.|++|++.|.+...|..|++ +|++++||+|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3577889999999999999999999987 8999999999999999875

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.5e-10  Score=80.38  Aligned_cols=44  Identities=32%  Similarity=0.299  Sum_probs=39.4

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|..++.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788888999999999999999999999999999999999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.4e-10  Score=79.35  Aligned_cols=45  Identities=13%  Similarity=0.168  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +|+++|++++||+|++|+++|...+.|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3e-10  Score=78.87  Aligned_cols=45  Identities=16%  Similarity=0.198  Sum_probs=42.4

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            489999999999999999999999999999999999999999874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.5e-10  Score=80.40  Aligned_cols=42  Identities=26%  Similarity=0.483  Sum_probs=27.2

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666666666666666666666666666666666666664

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.7e-10  Score=80.06  Aligned_cols=44  Identities=23%  Similarity=0.160  Sum_probs=39.2

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.1e-10  Score=79.71  Aligned_cols=45  Identities=18%  Similarity=0.268  Sum_probs=42.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=80.54  Aligned_cols=42  Identities=29%  Similarity=0.493  Sum_probs=25.9

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            455566666666666666666666666666666666666654

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=80.17  Aligned_cols=42  Identities=31%  Similarity=0.568  Sum_probs=24.3

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=80.18  Aligned_cols=45  Identities=29%  Similarity=0.449  Sum_probs=39.8

Q ss_pred             HHHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         135 AHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       135 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      .|+++|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999887

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.2e-10  Score=80.90  Aligned_cols=42  Identities=33%  Similarity=0.554  Sum_probs=23.8

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.1e-10  Score=78.75  Aligned_cols=45  Identities=16%  Similarity=0.244  Sum_probs=42.4

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            489999999999999999999999999999999999999999874

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.8e-10  Score=79.99  Aligned_cols=44  Identities=27%  Similarity=0.358  Sum_probs=39.2

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999999887

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=80.68  Aligned_cols=43  Identities=28%  Similarity=0.508  Sum_probs=34.7

Q ss_pred             hhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         591 MRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       591 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      +++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4567778888888888888888888888888888888888776

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.5e-10  Score=80.47  Aligned_cols=42  Identities=26%  Similarity=0.503  Sum_probs=23.9

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.6e-10  Score=80.20  Aligned_cols=44  Identities=36%  Similarity=0.474  Sum_probs=39.9

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|..++.|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            66788889999999999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=78.61  Aligned_cols=45  Identities=18%  Similarity=0.241  Sum_probs=42.4

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            488999999999999999999999999999999999999999874

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.5e-10  Score=80.40  Aligned_cols=44  Identities=34%  Similarity=0.479  Sum_probs=37.9

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|.+.+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888888999999999988899999888888888888877

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=80.05  Aligned_cols=42  Identities=21%  Similarity=0.536  Sum_probs=28.9

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            456666667777777777777777777777777777777665

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=80.10  Aligned_cols=42  Identities=24%  Similarity=0.520  Sum_probs=26.8

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.5e-10  Score=80.31  Aligned_cols=42  Identities=26%  Similarity=0.475  Sum_probs=25.0

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555566666666666666666666666666666666554

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.94  E-value=1.1e-10  Score=81.11  Aligned_cols=42  Identities=21%  Similarity=0.356  Sum_probs=20.5

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      |+++|++++||.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444444444444444444444444444444444444443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.8e-10  Score=78.26  Aligned_cols=41  Identities=22%  Similarity=0.498  Sum_probs=25.1

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |+++|++++||.|++|+++|.+.+.|..|+++|++++||+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34455666666666666666666666666666666666655

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=79.92  Aligned_cols=43  Identities=16%  Similarity=0.403  Sum_probs=30.3

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3566677777777777777777777777777777777777764

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.8e-10  Score=78.19  Aligned_cols=41  Identities=27%  Similarity=0.596  Sum_probs=28.7

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45666677777777777777777777777777777777665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.4e-10  Score=80.53  Aligned_cols=44  Identities=30%  Similarity=0.463  Sum_probs=39.0

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|..++.|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999999887

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.3e-10  Score=80.67  Aligned_cols=42  Identities=33%  Similarity=0.497  Sum_probs=23.5

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.2e-10  Score=80.89  Aligned_cols=42  Identities=24%  Similarity=0.551  Sum_probs=21.1

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444555555555555555555555555555555555543

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.5e-10  Score=80.38  Aligned_cols=42  Identities=31%  Similarity=0.517  Sum_probs=23.8

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            445555555555555555555555555555555555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.8e-10  Score=79.19  Aligned_cols=42  Identities=21%  Similarity=0.328  Sum_probs=28.1

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            555666666666666666666666666666666666666663

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.3e-10  Score=80.77  Aligned_cols=42  Identities=24%  Similarity=0.442  Sum_probs=21.2

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            344445555555555555555555555555555555555543

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.5e-10  Score=80.45  Aligned_cols=42  Identities=29%  Similarity=0.539  Sum_probs=23.2

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1.3e-10  Score=80.67  Aligned_cols=42  Identities=17%  Similarity=0.336  Sum_probs=20.8

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      |+++|++++||+|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            444444555555555555555555555555555555555443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.93  E-value=4e-10  Score=78.18  Aligned_cols=45  Identities=20%  Similarity=0.299  Sum_probs=42.4

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||+|++|+++|.....|..|+++|+++++|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            488999999999999999999999999999999999999999874

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.2e-10  Score=80.87  Aligned_cols=43  Identities=21%  Similarity=0.360  Sum_probs=32.3

Q ss_pred             hhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         591 MRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       591 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      +++|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4566777777777777777777777777777777777777766

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.4e-10  Score=78.58  Aligned_cols=44  Identities=20%  Similarity=0.343  Sum_probs=42.1

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      +|+++|++++||.|++|+++|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999976

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.7e-10  Score=80.09  Aligned_cols=42  Identities=33%  Similarity=0.504  Sum_probs=24.1

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.1e-10  Score=79.68  Aligned_cols=44  Identities=27%  Similarity=0.348  Sum_probs=38.8

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.+++||.|++|++.|..++.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56678888999999999999999999999999999999999887

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=2.7e-10  Score=79.89  Aligned_cols=42  Identities=21%  Similarity=0.457  Sum_probs=38.7

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccch
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNY  635 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~  635 (836)
                      +.+++||.|++|++.|.+...|..|+++|++++||+|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            567889999999999999999999999999999999999985

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.92  E-value=2.5e-10  Score=88.45  Aligned_cols=57  Identities=26%  Similarity=0.476  Sum_probs=52.6

Q ss_pred             hcCCCCccccc--chHhhcCchhHHhhhhhcCCCccccCCc--cchhhcchhhHHHHhhhh
Q psy6556         594 HGKDRPFSCLL--CNNTFAQLSTLLNHERIHDNHKPYKCTK--CNYSARVLSNKLAHERIY  650 (836)
Q Consensus       594 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  650 (836)
                      ....++|.|.+  |++.|.+...|..|+++|++++||+|++  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            35678999999  9999999999999999999999999975  999999999999999865

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.6e-10  Score=79.46  Aligned_cols=41  Identities=22%  Similarity=0.443  Sum_probs=23.0

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            44455555555555555555555555555555555555555

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.7e-10  Score=80.13  Aligned_cols=42  Identities=31%  Similarity=0.561  Sum_probs=22.7

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=2.5e-10  Score=78.75  Aligned_cols=42  Identities=21%  Similarity=0.410  Sum_probs=36.4

Q ss_pred             hhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccc
Q psy6556         593 IHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCN  634 (836)
Q Consensus       593 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~  634 (836)
                      +|++++||.|++|++.|.+.+.|..|+++|++++||.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            577888888888988888888888888888888888888886

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.4e-10  Score=79.31  Aligned_cols=42  Identities=24%  Similarity=0.507  Sum_probs=24.9

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555556666666666666666666666666666666554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2.5e-10  Score=77.46  Aligned_cols=41  Identities=32%  Similarity=0.659  Sum_probs=26.2

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            44556666666666666666666666666666666666665

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=2.1e-10  Score=78.75  Aligned_cols=41  Identities=17%  Similarity=0.340  Sum_probs=24.0

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            44555555555565566666555555555555555555555

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=2.2e-10  Score=78.66  Aligned_cols=41  Identities=27%  Similarity=0.495  Sum_probs=23.8

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            44555555555555555555555555555555555555555

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.4e-10  Score=78.56  Aligned_cols=42  Identities=24%  Similarity=0.587  Sum_probs=28.8

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666667777777777777777777777777777777664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.9e-10  Score=79.87  Aligned_cols=42  Identities=21%  Similarity=0.412  Sum_probs=23.9

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.5e-10  Score=80.42  Aligned_cols=42  Identities=21%  Similarity=0.279  Sum_probs=22.6

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            455555555555555555555555555555555555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.6e-10  Score=78.44  Aligned_cols=44  Identities=32%  Similarity=0.415  Sum_probs=38.9

Q ss_pred             HHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       136 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      |+++|.++++|.|++|++.|..+..|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999998875

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.5e-10  Score=80.32  Aligned_cols=41  Identities=20%  Similarity=0.262  Sum_probs=20.6

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC  658 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  658 (836)
                      |+++|++++||+|++|++.|...+.|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            44445555555555555555555555555555555555544

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.3e-10  Score=79.40  Aligned_cols=42  Identities=31%  Similarity=0.437  Sum_probs=26.6

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCC-CccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDN-HKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~-~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++ ++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45556666666666666666666666666666666 6666664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.9e-10  Score=78.99  Aligned_cols=42  Identities=26%  Similarity=0.515  Sum_probs=28.5

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666666677777777777666677776666666666664

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.7e-10  Score=77.51  Aligned_cols=45  Identities=16%  Similarity=0.214  Sum_probs=42.3

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhh-hhccCccccccCC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHER-IYHQDHVFKCHIN  661 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~c  661 (836)
                      .|+++|++++||.|++|+++|...+.|..|++ +|.+++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            58999999999999999999999999999999 9999999999874

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.88  E-value=5.8e-10  Score=77.35  Aligned_cols=44  Identities=30%  Similarity=0.530  Sum_probs=41.9

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK  632 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  632 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999999999999999999999999974

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=9.5e-10  Score=79.22  Aligned_cols=46  Identities=26%  Similarity=0.514  Sum_probs=38.8

Q ss_pred             hcCCCceeccccccccCCcchHHHHHH-HhCCCCCcccCcCCCcccC
Q psy6556         140 HLNIKPYACKYCGNAFAHKSSRDAHQN-IHTDLKPYLCLTCGQSFRT  185 (836)
Q Consensus       140 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~  185 (836)
                      |.+++||.|++|++.|.....|..|++ +|++++||.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            567788888888888888888888886 8888888888888888865

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.88  E-value=6.6e-10  Score=75.33  Aligned_cols=42  Identities=14%  Similarity=0.292  Sum_probs=40.1

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      |+++|++++||+|++|+++|...+.|..|+++|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            789999999999999999999999999999999999999884

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.8e-10  Score=77.03  Aligned_cols=44  Identities=20%  Similarity=0.267  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.88  E-value=1.1e-09  Score=84.64  Aligned_cols=54  Identities=30%  Similarity=0.598  Sum_probs=30.5

Q ss_pred             CCceecCc--ccccccchhhhhhHHHhhcccCCCCccccCc--cchhcccchhHHHHHhhc
Q psy6556         744 EGKYVCNY--CGKSYIDKRDYTNHVSVHMERKSGYTQRCHK--CNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       744 ~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~--C~~~F~~~~~L~~H~~~h  800 (836)
                      .++|.|++  |++.|.....|..|+++|.+++   +|+|++  |+++|.++..|..|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~---~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEK---PFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSC---SEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCC---CccCCCCCCCcccCCHHHHHhHhhcC
Confidence            44555655  6666666666666666555544   255543  666666655565555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.2e-10  Score=77.21  Aligned_cols=44  Identities=16%  Similarity=0.260  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999964

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.5e-10  Score=76.78  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.2e-10  Score=76.58  Aligned_cols=44  Identities=16%  Similarity=0.270  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      +|+++|++++||.|++|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.7e-10  Score=76.74  Aligned_cols=44  Identities=23%  Similarity=0.298  Sum_probs=42.0

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|+.|++.|...++|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.87  E-value=3e-10  Score=81.95  Aligned_cols=50  Identities=14%  Similarity=0.104  Sum_probs=35.7

Q ss_pred             HhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccc
Q psy6556         607 NTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVF  656 (836)
Q Consensus       607 ~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  656 (836)
                      +.|...+.|..|+++|++++||.|+.|+++|...+.|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45666677777777777777777777777777777777777777776665

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.9e-10  Score=77.00  Aligned_cols=44  Identities=20%  Similarity=0.290  Sum_probs=42.0

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.9e-10  Score=76.99  Aligned_cols=44  Identities=14%  Similarity=0.228  Sum_probs=42.0

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999975

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=7.7e-10  Score=76.71  Aligned_cols=44  Identities=27%  Similarity=0.514  Sum_probs=41.9

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK  632 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  632 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            48899999999999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.7e-10  Score=76.73  Aligned_cols=44  Identities=25%  Similarity=0.348  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|++.|...+.|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.86  E-value=3.1e-10  Score=76.98  Aligned_cols=40  Identities=25%  Similarity=0.480  Sum_probs=21.9

Q ss_pred             hhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         591 MRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       591 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      +++|++++||.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3445555555555555555555555555555555555554

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=2e-10  Score=79.70  Aligned_cols=42  Identities=17%  Similarity=0.294  Sum_probs=23.3

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      |+++|++++||+|++|+++|...+.|..|+++|+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455555555555555555555555555555555555555554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.9e-10  Score=76.68  Aligned_cols=44  Identities=20%  Similarity=0.244  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.6e-10  Score=76.45  Aligned_cols=44  Identities=18%  Similarity=0.183  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999964

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=3e-10  Score=77.93  Aligned_cols=41  Identities=17%  Similarity=0.404  Sum_probs=29.1

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            55666777777777777777777777777777777777766

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.3e-10  Score=76.60  Aligned_cols=44  Identities=23%  Similarity=0.248  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            58999999999999999999999999999999999999999864

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=2.2e-10  Score=77.73  Aligned_cols=41  Identities=22%  Similarity=0.263  Sum_probs=21.6

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC  658 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  658 (836)
                      |+++|++++||+|+.|+++|...+.|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            44455555555555555555555555555555555555544

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8e-10  Score=76.68  Aligned_cols=44  Identities=18%  Similarity=0.329  Sum_probs=42.0

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|+++|...++|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.9e-10  Score=76.41  Aligned_cols=44  Identities=14%  Similarity=0.257  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|++.|...+.|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9.7e-10  Score=76.21  Aligned_cols=44  Identities=16%  Similarity=0.220  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.1e-09  Score=74.30  Aligned_cols=42  Identities=14%  Similarity=0.252  Sum_probs=40.0

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      |+++|++++||+|++|+++|...+.|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            788999999999999999999999999999999999999873

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.4e-10  Score=76.56  Aligned_cols=44  Identities=20%  Similarity=0.314  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999964

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.7e-10  Score=76.48  Aligned_cols=44  Identities=27%  Similarity=0.497  Sum_probs=41.9

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK  632 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  632 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7.9e-10  Score=74.96  Aligned_cols=42  Identities=17%  Similarity=0.317  Sum_probs=40.1

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccc
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC  658 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  658 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            489999999999999999999999999999999999999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=5e-10  Score=76.82  Aligned_cols=42  Identities=17%  Similarity=0.279  Sum_probs=26.4

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            345566666666666666666666666666666666666653

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=75.87  Aligned_cols=44  Identities=18%  Similarity=0.232  Sum_probs=41.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|+++++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=75.98  Aligned_cols=44  Identities=23%  Similarity=0.341  Sum_probs=41.6

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|++.|.....|..|+++|+++++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999964

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=9.4e-10  Score=75.43  Aligned_cols=43  Identities=19%  Similarity=0.295  Sum_probs=40.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      +|+++|++++||+|++|+++|...+.|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5899999999999999999999999999999999999999884

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1e-09  Score=75.27  Aligned_cols=43  Identities=21%  Similarity=0.363  Sum_probs=41.0

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      .|+++|++++||+|++|+++|...++|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999999999999999999999999999884

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1e-09  Score=76.11  Aligned_cols=43  Identities=19%  Similarity=0.346  Sum_probs=41.4

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999999999999999999999999999996

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=8.6e-10  Score=76.46  Aligned_cols=44  Identities=18%  Similarity=0.274  Sum_probs=41.8

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      +|+++|++++||+|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.1e-09  Score=75.14  Aligned_cols=43  Identities=21%  Similarity=0.291  Sum_probs=41.0

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5899999999999999999999999999999999999999984

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-09  Score=75.44  Aligned_cols=44  Identities=16%  Similarity=0.301  Sum_probs=41.5

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48999999999999999999999999999999999999999863

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1e-09  Score=76.06  Aligned_cols=44  Identities=27%  Similarity=0.446  Sum_probs=41.8

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCc
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTK  632 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  632 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999974

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.83  E-value=1.2e-10  Score=86.71  Aligned_cols=56  Identities=13%  Similarity=0.259  Sum_probs=44.2

Q ss_pred             HHHHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcCCCcccChhhhhhh
Q psy6556         134 KAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRH  192 (836)
Q Consensus       134 ~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  192 (836)
                      ..|+++|.+++||.|++||+.|.....|.   ++|++++||.|.+|++.|.....+..+
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            34667788888888888888888877776   788888888888888888877766544

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.5e-10  Score=79.23  Aligned_cols=43  Identities=14%  Similarity=0.239  Sum_probs=26.8

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      .|+++|++++||+|++|++.|...+.|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3556666666666666666666666666666666666666653

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.1e-09  Score=75.94  Aligned_cols=44  Identities=20%  Similarity=0.215  Sum_probs=41.5

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhcc-CccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQ-DHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  660 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|++ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999 99999864

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.2e-09  Score=74.01  Aligned_cols=41  Identities=24%  Similarity=0.310  Sum_probs=39.5

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC  658 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  658 (836)
                      |+++|++++||+|++|+++|...+.|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            78999999999999999999999999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.4e-09  Score=74.52  Aligned_cols=43  Identities=14%  Similarity=0.273  Sum_probs=41.0

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      .|+++|++++||.|+.|+++|...+.|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5899999999999999999999999999999999999999884

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=75.27  Aligned_cols=43  Identities=12%  Similarity=0.234  Sum_probs=40.9

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      .|+++|++++||+|++|+++|...+.|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999999999999999999999999999884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=74.12  Aligned_cols=41  Identities=27%  Similarity=0.542  Sum_probs=39.6

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |+++|++++||.|++|+++|.+.+.|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67899999999999999999999999999999999999998

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=7.7e-10  Score=76.68  Aligned_cols=41  Identities=29%  Similarity=0.453  Sum_probs=26.4

Q ss_pred             hhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         591 MRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       591 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      +++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            34556666666666666666666666666666666666664

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=8.4e-10  Score=77.42  Aligned_cols=44  Identities=25%  Similarity=0.412  Sum_probs=34.0

Q ss_pred             hhhhhcCCCCcccc--cchHhhcCchhHHhhhhhcCCCccccCCcc
Q psy6556         590 HMRIHGKDRPFSCL--LCNNTFAQLSTLLNHERIHDNHKPYKCTKC  633 (836)
Q Consensus       590 h~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  633 (836)
                      |.++|++++||.|.  .|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567777888887  788888888888888888888888888776

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.80  E-value=1.6e-09  Score=73.34  Aligned_cols=41  Identities=20%  Similarity=0.264  Sum_probs=39.5

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC  658 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  658 (836)
                      |+++|++++||+|++|+++|...++|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            78999999999999999999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.3e-09  Score=75.58  Aligned_cols=43  Identities=23%  Similarity=0.434  Sum_probs=41.3

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999996

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.80  E-value=1.1e-09  Score=74.54  Aligned_cols=39  Identities=18%  Similarity=0.286  Sum_probs=27.9

Q ss_pred             hhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         593 IHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       593 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      +|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            456667777777777777777777777777777777765

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=2.4e-09  Score=73.70  Aligned_cols=42  Identities=26%  Similarity=0.363  Sum_probs=38.3

Q ss_pred             HhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcCC
Q psy6556         139 IHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCG  180 (836)
Q Consensus       139 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~  180 (836)
                      .|++++||.|++|++.|..++.|..|+++|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            577889999999999999999999999999999999999986

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.4e-09  Score=75.47  Aligned_cols=44  Identities=20%  Similarity=0.292  Sum_probs=41.8

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1e-09  Score=76.12  Aligned_cols=43  Identities=35%  Similarity=0.410  Sum_probs=37.5

Q ss_pred             HHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcC
Q psy6556         137 LRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTC  179 (836)
Q Consensus       137 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  179 (836)
                      +++|.++++|.|++|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3567888899999999999999999999999999999998887

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.3e-09  Score=74.27  Aligned_cols=44  Identities=16%  Similarity=0.261  Sum_probs=41.4

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      .|+++|++++||.|++|++.|.....|..|+++|+++++|.|+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999863

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=9.6e-10  Score=75.34  Aligned_cols=41  Identities=24%  Similarity=0.406  Sum_probs=23.0

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            44555555555555555555555555555555555555554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=9.9e-10  Score=75.73  Aligned_cols=41  Identities=27%  Similarity=0.545  Sum_probs=31.4

Q ss_pred             hhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCC
Q psy6556         591 MRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCT  631 (836)
Q Consensus       591 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  631 (836)
                      .++|++++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            35667777788888888888888888888778777777775

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=2.7e-09  Score=74.65  Aligned_cols=42  Identities=26%  Similarity=0.403  Sum_probs=36.2

Q ss_pred             hcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcCCC
Q psy6556         140 HLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQ  181 (836)
Q Consensus       140 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~  181 (836)
                      |.++++|.|++|++.|.....|..|+++|++++||.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            566788999999999999999999999998888899988875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.6e-09  Score=72.92  Aligned_cols=39  Identities=31%  Similarity=0.519  Sum_probs=28.0

Q ss_pred             hhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         592 RIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       592 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      ++|++++||.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            356667777777777777777777777777777777766

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.6e-09  Score=73.97  Aligned_cols=43  Identities=16%  Similarity=0.181  Sum_probs=40.5

Q ss_pred             hhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         619 ERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       619 ~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      +++|++++||.|++|+++|...+.|..|+++|+++++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6789999999999999999999999999999999999999874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.5e-09  Score=74.36  Aligned_cols=42  Identities=14%  Similarity=0.274  Sum_probs=40.5

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccc
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC  658 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  658 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999999999999999999999999999999987

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=8.1e-10  Score=85.46  Aligned_cols=68  Identities=22%  Similarity=0.394  Sum_probs=54.7

Q ss_pred             hHHHHHHHHhcCcCcccCCcccccccCchhHHHHHHhhcCCCCCceecCcccccccchhhhhhHHHhhcccCC
Q psy6556         702 SNLNAHYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHSQHEGKYVCNYCGKSYIDKRDYTNHVSVHMERKS  774 (836)
Q Consensus       702 ~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~  774 (836)
                      +.|..|++.|.+++|+.|+.|++.| ..+.|..|+ .+-  ++++|.|+.|++.|. +.+|..|+++|.+++.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c--~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYC--GARTELCGNCGRNVL-VKDLKTHPEVCGREGS   70 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHH--HHCEEECSSSCCEEE-TTGGGTHHHHBTTBSS
T ss_pred             hHHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHc--CCCceEcccCCCcCc-HHHHHHHHHHccCCcC
Confidence            4567788888888888888888888 488888888 555  478888988988876 6888888888877654

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.75  E-value=1.3e-09  Score=78.59  Aligned_cols=51  Identities=14%  Similarity=0.152  Sum_probs=41.2

Q ss_pred             ccccChHHHHHHHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcc
Q psy6556         125 YRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYL  175 (836)
Q Consensus       125 ~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  175 (836)
                      +.|.....|..|+++|.+++||.|++|++.|...+.|..|+++|++++||.
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            445566667778888888888888888888888888888888888888763

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.2e-09  Score=72.65  Aligned_cols=43  Identities=12%  Similarity=0.118  Sum_probs=40.5

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      .|+++|++++||.|++|+++|...+.|..|+++|+++++|.|+
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            3789999999999999999999999999999999999999984

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.9e-09  Score=72.22  Aligned_cols=42  Identities=21%  Similarity=0.256  Sum_probs=40.1

Q ss_pred             hhhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccc
Q psy6556         617 NHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC  658 (836)
Q Consensus       617 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  658 (836)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            589999999999999999999999999999999999999876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=6.9e-10  Score=85.84  Aligned_cols=66  Identities=15%  Similarity=0.241  Sum_probs=45.7

Q ss_pred             hhhhhhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhccC
Q psy6556         585 TNFNIHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQD  653 (836)
Q Consensus       585 ~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  653 (836)
                      ..|..|++.+.+++|+.|.+|++.|. .+.|..|+ .|.+++||.|+.|++.|. ...|..|++++.++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            34566666677777777777777773 77777777 677777777777777655 47777777666554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=6.1e-09  Score=72.03  Aligned_cols=43  Identities=16%  Similarity=0.165  Sum_probs=40.3

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      ++++|++++||+|++|++.|...+.|..|+++|+++++|.|.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            4678999999999999999999999999999999999999864

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.67  E-value=8.9e-09  Score=69.95  Aligned_cols=41  Identities=12%  Similarity=0.119  Sum_probs=38.6

Q ss_pred             hhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccC
Q psy6556         620 RIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHI  660 (836)
Q Consensus       620 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  660 (836)
                      ++|++++||+|+.|++.|...+.|..|+++|+++++|.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            57899999999999999999999999999999999999864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=7.8e-09  Score=71.13  Aligned_cols=42  Identities=26%  Similarity=0.438  Sum_probs=39.6

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCcccccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCH  659 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  659 (836)
                      +.++|++++||+|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            567899999999999999999999999999999999999985

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.2e-08  Score=68.46  Aligned_cols=39  Identities=23%  Similarity=0.298  Sum_probs=37.2

Q ss_pred             hhcCCCccccCCccchhhcchhhHHHHhhhhccCccccc
Q psy6556         620 RIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKC  658 (836)
Q Consensus       620 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  658 (836)
                      ++|++++||+|++|+++|...+.|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            578999999999999999999999999999999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.3e-08  Score=71.24  Aligned_cols=44  Identities=16%  Similarity=0.182  Sum_probs=41.0

Q ss_pred             hhhhcCCCccccCC--ccchhhcchhhHHHHhhhhccCccccccCC
Q psy6556         618 HERIHDNHKPYKCT--KCNYSARVLSNKLAHERIYHQDHVFKCHIN  661 (836)
Q Consensus       618 H~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  661 (836)
                      |.++|++++||+|.  .|++.|...+.|..|+++|.++++|+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67899999999998  899999999999999999999999999874

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=1.5e-09  Score=86.66  Aligned_cols=58  Identities=12%  Similarity=0.253  Sum_probs=37.8

Q ss_pred             hhhhcCCCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhhcc
Q psy6556         591 MRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQ  652 (836)
Q Consensus       591 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  652 (836)
                      .++|++++||.|++|++.|.+.+.|..|+++|++++||+|..|.    ....|..|.+.|.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            44566777777777777777777777777777777777776544    34455555555544

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.52  E-value=2.1e-08  Score=66.39  Aligned_cols=37  Identities=19%  Similarity=0.419  Sum_probs=25.0

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCCCccccC
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKC  630 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  630 (836)
                      |++++||.|++|++.|.+.+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3456677777777777777777777777777776654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=2.2e-08  Score=65.37  Aligned_cols=35  Identities=17%  Similarity=0.445  Sum_probs=20.1

Q ss_pred             hhcCCCCcccccchHhhcCchhHHhhhhhcCCCcc
Q psy6556         593 IHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHKP  627 (836)
Q Consensus       593 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  627 (836)
                      +|++++||.|++|++.|.+.+.|..|+++|++++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            45555555666666666555555555555555543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=4.1e-08  Score=71.07  Aligned_cols=38  Identities=24%  Similarity=0.483  Sum_probs=29.8

Q ss_pred             hcCCCCccccc--chHhhcCchhHHhhh-hhcCCCccccCC
Q psy6556         594 HGKDRPFSCLL--CNNTFAQLSTLLNHE-RIHDNHKPYKCT  631 (836)
Q Consensus       594 h~~~~~~~C~~--C~~~f~~~~~L~~H~-~~H~~~~~~~C~  631 (836)
                      .++++||+|..  |++.|.+.+.|..|+ ++|++++||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            36778888865  888888888888886 578888888774

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.46  E-value=7e-08  Score=62.91  Aligned_cols=35  Identities=20%  Similarity=0.322  Sum_probs=21.1

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhcc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQ  652 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  652 (836)
                      |+++|++++||+|+.|+++|...+.|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            55556666666666666666666666666655544

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.43  E-value=4.9e-08  Score=63.70  Aligned_cols=36  Identities=25%  Similarity=0.405  Sum_probs=34.0

Q ss_pred             hhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       590 h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      |+++|++++||.|++|++.|.+.+.|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            678899999999999999999999999999999875

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.40  E-value=1.5e-07  Score=62.21  Aligned_cols=37  Identities=22%  Similarity=0.503  Sum_probs=31.8

Q ss_pred             hcCCCceeccccccccCCcchHHHHHHHhCCCCCccc
Q psy6556         140 HLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLC  176 (836)
Q Consensus       140 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  176 (836)
                      |.+++||.|++|++.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4678889999999999999999999999999888865

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=9.6e-08  Score=62.26  Aligned_cols=37  Identities=16%  Similarity=0.218  Sum_probs=34.2

Q ss_pred             hhhcCCCccccCCccchhhcchhhHHHHhhhhccCcc
Q psy6556         619 ERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHV  655 (836)
Q Consensus       619 ~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  655 (836)
                      +++|++++||.|+.|+++|...+.|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999998764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.38  E-value=6.4e-08  Score=62.18  Aligned_cols=33  Identities=21%  Similarity=0.349  Sum_probs=18.3

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCCCc
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHK  626 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  626 (836)
                      |++++||.|++|++.|.+.+.|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            344555555555555555555555555555554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.37  E-value=8.1e-08  Score=60.64  Aligned_cols=32  Identities=22%  Similarity=0.418  Sum_probs=23.9

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcCCCcccc
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHDNHKPYK  629 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  629 (836)
                      +||.|++|++.|.+.+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46777777777777777777777777777764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.37  E-value=4.8e-08  Score=77.88  Aligned_cols=59  Identities=12%  Similarity=0.189  Sum_probs=48.4

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhccCccccccCCCccccccchhHHHhhhhhccc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDHVFKCHINNCIFSTKFYSCLRRHRKIFHS  682 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~c~~~~~~~~~l~~H~~~~~~  682 (836)
                      |.++|++++||+|+.|++.|...+.|..|+++|++++||+|..+..      ...|..|.+.+.+
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~------~~~~~~~~~~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER------RKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC------CCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh------HHHHHhhhccccc
Confidence            4567999999999999999999999999999999999999977432      2345666666553

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.36  E-value=8e-08  Score=61.70  Aligned_cols=33  Identities=24%  Similarity=0.601  Sum_probs=18.4

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCCCc
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDNHK  626 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  626 (836)
                      |++++||.|++|++.|.+.+.|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            345555555555555555555555555555554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.28  E-value=9.7e-08  Score=59.76  Aligned_cols=31  Identities=19%  Similarity=0.315  Sum_probs=26.2

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcCCCccc
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHDNHKPY  628 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  628 (836)
                      +||.|++|++.|.+.+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4788888888888888888888888888876

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.26  E-value=4.4e-07  Score=58.14  Aligned_cols=34  Identities=15%  Similarity=0.223  Sum_probs=29.0

Q ss_pred             hcCCCceeccccccccCCcchHHHHHHHhCCCCC
Q psy6556         140 HLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKP  173 (836)
Q Consensus       140 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  173 (836)
                      |.+++||.|++|++.|...+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6778889999999999999999999998887764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.25  E-value=4.3e-07  Score=58.18  Aligned_cols=34  Identities=29%  Similarity=0.621  Sum_probs=29.0

Q ss_pred             hcCCCceeccccccccCCcchHHHHHHHhCCCCC
Q psy6556         140 HLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKP  173 (836)
Q Consensus       140 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  173 (836)
                      |.+++||.|++|++.|...+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            6788889999999999999999999988887764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.23  E-value=1.1e-06  Score=63.69  Aligned_cols=44  Identities=23%  Similarity=0.375  Sum_probs=37.7

Q ss_pred             cCCccccCCCcccccc--ccccccCHHHHHHHH-hhhcCCcceeccc
Q psy6556          10 CMPHESQDERTYHCPL--CSKQFSKLTTLKRHV-GIHMKTQPVRCGY   53 (836)
Q Consensus        10 ~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~   53 (836)
                      ..+....+++||+|+.  |++.|...+.|..|+ ++|++++||.|..
T Consensus        17 ~~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           17 EFPTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CCSSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4455667899999975  999999999999998 6899999998864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=4.5e-07  Score=58.94  Aligned_cols=33  Identities=18%  Similarity=0.301  Sum_probs=19.9

Q ss_pred             hhcCCCccccCCccchhhcchhhHHHH-hhhhcc
Q psy6556         620 RIHDNHKPYKCTKCNYSARVLSNKLAH-ERIYHQ  652 (836)
Q Consensus       620 ~~H~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  652 (836)
                      ++|++++||+|+.|+++|...+.|..| +++|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            455666666666666666666666666 555543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.21  E-value=8.1e-07  Score=55.90  Aligned_cols=32  Identities=28%  Similarity=0.635  Sum_probs=29.4

Q ss_pred             CccccccccccccCHHHHHHHHhhhcCCccee
Q psy6556          19 RTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVR   50 (836)
Q Consensus        19 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   50 (836)
                      +||.|++|++.|.+.+.|..|+++|.+++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999999885

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=5.6e-07  Score=58.14  Aligned_cols=30  Identities=17%  Similarity=0.352  Sum_probs=14.5

Q ss_pred             cCCCCccccc--chHhhcCchhHHhhhhhcCC
Q psy6556         595 GKDRPFSCLL--CNNTFAQLSTLLNHERIHDN  624 (836)
Q Consensus       595 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~  624 (836)
                      ++++||+|++  |+++|.+++.|..|+++|++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            3444455543  55555555555555544444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=2e-07  Score=60.61  Aligned_cols=35  Identities=17%  Similarity=0.226  Sum_probs=32.1

Q ss_pred             hhhhcCCCCcccccchHhhcCchhHHhh-hhhcCCC
Q psy6556         591 MRIHGKDRPFSCLLCNNTFAQLSTLLNH-ERIHDNH  625 (836)
Q Consensus       591 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~~  625 (836)
                      +++|++++||.|+.|++.|.+.+.|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            3578899999999999999999999999 9999875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.18  E-value=4.5e-07  Score=57.56  Aligned_cols=25  Identities=40%  Similarity=0.720  Sum_probs=14.4

Q ss_pred             cCcCcccCCcccccccCchhHHHHH
Q psy6556         712 LKVRRFSCTNCSLNFTYLSNLIRHR  736 (836)
Q Consensus       712 ~~~~~~~C~~C~~~f~~~~~L~~H~  736 (836)
                      .+++||+|++||++|++.++|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3455555555555555555555555

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=3.4e-07  Score=59.09  Aligned_cols=32  Identities=16%  Similarity=0.374  Sum_probs=17.8

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      |++++||.|++|++.|.+.+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            44455555555555555555555555555544

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.16  E-value=3.3e-07  Score=58.18  Aligned_cols=25  Identities=40%  Similarity=0.592  Sum_probs=16.2

Q ss_pred             cCCCCcccccchHhhcCchhHHhhh
Q psy6556         595 GKDRPFSCLLCNNTFAQLSTLLNHE  619 (836)
Q Consensus       595 ~~~~~~~C~~C~~~f~~~~~L~~H~  619 (836)
                      .+++||.|+.|+++|.+.+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566666666666666666666665

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=1e-06  Score=56.87  Aligned_cols=32  Identities=25%  Similarity=0.313  Sum_probs=27.8

Q ss_pred             hcCCCceeccc--cccccCCcchHHHHHHHhCCC
Q psy6556         140 HLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDL  171 (836)
Q Consensus       140 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  171 (836)
                      +.+++||+|++  |+++|..++.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56788999986  999999999999999999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=4.1e-07  Score=58.71  Aligned_cols=32  Identities=28%  Similarity=0.527  Sum_probs=16.5

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      |++++||.|++|++.|.+.+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            34445555555555555555555555555443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=8.2e-07  Score=57.66  Aligned_cols=33  Identities=15%  Similarity=0.162  Sum_probs=19.2

Q ss_pred             hcCCCccccCCccchhhcch-hhHHHHhhhhccC
Q psy6556         621 IHDNHKPYKCTKCNYSARVL-SNKLAHERIYHQD  653 (836)
Q Consensus       621 ~H~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  653 (836)
                      +|++++||+|+.|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            45555666666666666665 5666666555543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=6e-07  Score=57.89  Aligned_cols=32  Identities=22%  Similarity=0.492  Sum_probs=18.4

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      |++++||.|++|++.|.+...|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            34555556666666666555666665555554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.11  E-value=6.4e-07  Score=55.91  Aligned_cols=31  Identities=19%  Similarity=0.455  Sum_probs=26.7

Q ss_pred             CccCCccchhcccchhhhhccccccCCCCCC
Q psy6556         803 QYRCTRCNKTFKQNTSFIRHSLKHFNSSNSD  833 (836)
Q Consensus       803 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~  833 (836)
                      ||.|++||++|.+.+.|.+|+++|++++|.+
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCCC
Confidence            6889999999999999999999998888753

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.2e-06  Score=56.43  Aligned_cols=35  Identities=31%  Similarity=0.544  Sum_probs=31.8

Q ss_pred             hhcCCCccccCCccchhhcchhhHHHHhhhhccCc
Q psy6556         620 RIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDH  654 (836)
Q Consensus       620 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  654 (836)
                      +.|++++||+|++|++.|...+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            46899999999999999999999999999998753

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.2e-06  Score=56.43  Aligned_cols=35  Identities=11%  Similarity=0.152  Sum_probs=31.7

Q ss_pred             hhcCCCccccCCccchhhcchhhHHHHhhhhccCc
Q psy6556         620 RIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDH  654 (836)
Q Consensus       620 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  654 (836)
                      +.|++++||+|++|++.|...+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            46889999999999999999999999999988753

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=1.2e-06  Score=56.85  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=29.1

Q ss_pred             HHhcCCCceeccccccccCCc-chHHHHHHHhCCC
Q psy6556         138 RIHLNIKPYACKYCGNAFAHK-SSRDAHQNIHTDL  171 (836)
Q Consensus       138 ~~h~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~~~  171 (836)
                      ++|.+++||.|++|++.|... +.|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            357788899999999999998 8999999988765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.07  E-value=1.5e-06  Score=56.74  Aligned_cols=35  Identities=23%  Similarity=0.515  Sum_probs=30.2

Q ss_pred             hcCCCceecc--ccccccCCcchHHHHHHHhCCCCCc
Q psy6556         140 HLNIKPYACK--YCGNAFAHKSSRDAHQNIHTDLKPY  174 (836)
Q Consensus       140 h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~  174 (836)
                      |++++||.|.  .|++.|...+.|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4678889999  5999999999999999999888876

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.07  E-value=1.4e-06  Score=56.94  Aligned_cols=33  Identities=18%  Similarity=0.305  Sum_probs=15.8

Q ss_pred             CCCccccCC--ccchhhcchhhHHHHhhhhccCcc
Q psy6556         623 DNHKPYKCT--KCNYSARVLSNKLAHERIYHQDHV  655 (836)
Q Consensus       623 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  655 (836)
                      ++++||+|+  .|+++|...+.|..|+++|+++++
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            344445554  255555555555555544444444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.07  E-value=6.8e-07  Score=62.04  Aligned_cols=32  Identities=22%  Similarity=0.555  Sum_probs=15.6

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhh-hcCCC
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHER-IHDNH  625 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~  625 (836)
                      |++++||.|.+|++.|.+...|..|++ +|+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            344455555555555555555555555 45443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=1.6e-06  Score=55.88  Aligned_cols=31  Identities=32%  Similarity=0.629  Sum_probs=15.6

Q ss_pred             cCCCccccCCccchhhcchhhHHHHhhhhcc
Q psy6556         622 HDNHKPYKCTKCNYSARVLSNKLAHERIYHQ  652 (836)
Q Consensus       622 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  652 (836)
                      |++++||+|++|++.|...+.|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            4445555555555555555555555554443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.05  E-value=1e-06  Score=60.87  Aligned_cols=39  Identities=15%  Similarity=0.216  Sum_probs=23.7

Q ss_pred             HHhhhhhcCCCccccCC--ccchhhcchhhHHHHhhhhccC
Q psy6556         615 LLNHERIHDNHKPYKCT--KCNYSARVLSNKLAHERIYHQD  653 (836)
Q Consensus       615 L~~H~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  653 (836)
                      +..|+..|++++||+|+  .|+++|...++|..|+++|+++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            34444556666666664  4666666666666666666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=8.9e-07  Score=57.07  Aligned_cols=31  Identities=35%  Similarity=0.661  Sum_probs=17.7

Q ss_pred             cCCCCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         595 GKDRPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       595 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      ++++||.|++|++.|.+.+.|..|+++|+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            4455555555555555555555555555554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=2e-06  Score=55.32  Aligned_cols=33  Identities=33%  Similarity=0.430  Sum_probs=28.1

Q ss_pred             HhcCCCceeccccccccCCcchHHHHHHHhCCC
Q psy6556         139 IHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDL  171 (836)
Q Consensus       139 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  171 (836)
                      +|.+++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            467788899999999999999999999888775

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.00  E-value=6.1e-07  Score=61.99  Aligned_cols=39  Identities=23%  Similarity=0.371  Sum_probs=34.5

Q ss_pred             hhhhhhhcCCCCcccc--cchHhhcCchhHHhhhhhcCCCc
Q psy6556         588 NIHMRIHGKDRPFSCL--LCNNTFAQLSTLLNHERIHDNHK  626 (836)
Q Consensus       588 ~~h~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  626 (836)
                      ..++..|++++||.|+  .|++.|.+.+.|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4456679999999996  79999999999999999999874

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=2.8e-06  Score=54.64  Aligned_cols=34  Identities=15%  Similarity=0.191  Sum_probs=31.4

Q ss_pred             hcCCCccccCCccchhhcchhhHHHHhhhhccCc
Q psy6556         621 IHDNHKPYKCTKCNYSARVLSNKLAHERIYHQDH  654 (836)
Q Consensus       621 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  654 (836)
                      .|++++||.|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999998763

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=3.9e-06  Score=53.93  Aligned_cols=32  Identities=38%  Similarity=0.645  Sum_probs=27.2

Q ss_pred             hcCCCceeccccccccCCcchHHHHHHHhCCC
Q psy6556         140 HLNIKPYACKYCGNAFAHKSSRDAHQNIHTDL  171 (836)
Q Consensus       140 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  171 (836)
                      |.+++||.|++|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            56778889999999998888999998888765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.96  E-value=2.3e-06  Score=59.26  Aligned_cols=34  Identities=21%  Similarity=0.283  Sum_probs=29.7

Q ss_pred             hcCCCccccCCccchhhcchhhHHHHhh-hhccCc
Q psy6556         621 IHDNHKPYKCTKCNYSARVLSNKLAHER-IYHQDH  654 (836)
Q Consensus       621 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  654 (836)
                      +|++++||.|.+|+++|....+|..|++ +|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            5899999999999999999999999999 888765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.13  E-value=1.6e-06  Score=52.61  Aligned_cols=28  Identities=36%  Similarity=0.858  Sum_probs=21.3

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      +||.|++|++.|.+.+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3677888888888888888887777765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.09  E-value=1.8e-06  Score=52.77  Aligned_cols=28  Identities=36%  Similarity=0.840  Sum_probs=21.5

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      +||.|++|++.|.+.+.|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5677888888888888888887777765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.86  E-value=2.6e-06  Score=51.54  Aligned_cols=27  Identities=30%  Similarity=0.589  Sum_probs=16.1

Q ss_pred             CcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         599 PFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      ||.|++|++.|.+.+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            555666666666666666666665554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.85  E-value=3.3e-06  Score=51.06  Aligned_cols=27  Identities=37%  Similarity=0.711  Sum_probs=16.9

Q ss_pred             CcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         599 PFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      ||.|++|++.|.+.+.|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.84  E-value=5.1e-06  Score=51.66  Aligned_cols=28  Identities=32%  Similarity=0.795  Sum_probs=19.5

Q ss_pred             CCcccc--cchHhhcCchhHHhhhhhcCCC
Q psy6556         598 RPFSCL--LCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       598 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      +||.|+  .|++.|.+.+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567776  6777777777777777777665

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.83  E-value=6.6e-06  Score=53.23  Aligned_cols=31  Identities=23%  Similarity=0.162  Sum_probs=15.6

Q ss_pred             cCCCccccCCc--cchhhcchhhHHHHhhhhcc
Q psy6556         622 HDNHKPYKCTK--CNYSARVLSNKLAHERIYHQ  652 (836)
Q Consensus       622 H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  652 (836)
                      |++++||.|++  |+++|...+.|..|+++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            34455555542  55555555555555555444

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.82  E-value=7.6e-06  Score=52.90  Aligned_cols=32  Identities=28%  Similarity=0.423  Sum_probs=27.0

Q ss_pred             hcCCCceeccc--cccccCCcchHHHHHHHhCCC
Q psy6556         140 HLNIKPYACKY--CGNAFAHKSSRDAHQNIHTDL  171 (836)
Q Consensus       140 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  171 (836)
                      |++++||.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56788899985  999999999999998888775

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=8.9e-06  Score=49.53  Aligned_cols=24  Identities=38%  Similarity=0.964  Sum_probs=10.1

Q ss_pred             ceecCcccccccchhhhhhHHHhh
Q psy6556         746 KYVCNYCGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       746 ~~~C~~C~~~f~~~~~l~~H~~~H  769 (836)
                      +|.|++||+.|.....|..|+++|
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h   26 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETH   26 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTT
T ss_pred             CccCCCCCcccCCHHHHHHHHHHh
Confidence            344444444444444444444444

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.82  E-value=4.8e-06  Score=51.33  Aligned_cols=28  Identities=36%  Similarity=0.819  Sum_probs=19.3

Q ss_pred             CCcccc--cchHhhcCchhHHhhhhhcCCC
Q psy6556         598 RPFSCL--LCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       598 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      +||.|+  .|++.|.+.+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            366776  6777777777777777777665

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.81  E-value=4.3e-06  Score=51.01  Aligned_cols=28  Identities=21%  Similarity=0.441  Sum_probs=16.4

Q ss_pred             CcccccchHhhcCchhHHhhhhhcCCCc
Q psy6556         599 PFSCLLCNNTFAQLSTLLNHERIHDNHK  626 (836)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~  626 (836)
                      ||.|++|++.|.+.+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4556666666666666666666555543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.81  E-value=5e-06  Score=49.25  Aligned_cols=24  Identities=33%  Similarity=0.659  Sum_probs=13.7

Q ss_pred             cccCccchhcccchhHHHHHhhcC
Q psy6556         778 QRCHKCNATFRIKKFLTRHMKTHL  801 (836)
Q Consensus       778 ~~C~~C~~~F~~~~~L~~H~~~h~  801 (836)
                      |+|++||++|.++..|..|+++|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            555555555555555555555554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.81  E-value=9e-06  Score=48.10  Aligned_cols=23  Identities=30%  Similarity=0.540  Sum_probs=9.3

Q ss_pred             cccCccchhcccchhHHHHHhhc
Q psy6556         778 QRCHKCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       778 ~~C~~C~~~F~~~~~L~~H~~~h  800 (836)
                      |.|+.||++|.+++.|..|+++|
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            4 FSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHC
T ss_pred             ccCCCcChhhCCHHHHHHHHHHc
Confidence            33444444444444444444333

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.81  E-value=9.4e-06  Score=48.97  Aligned_cols=23  Identities=26%  Similarity=0.693  Sum_probs=9.2

Q ss_pred             eecCcccccccchhhhhhHHHhh
Q psy6556         747 YVCNYCGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       747 ~~C~~C~~~f~~~~~l~~H~~~H  769 (836)
                      |.|++||+.|.....|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLH   25 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGG
T ss_pred             ccCCCCCchhCCHHHHHHHHHHh
Confidence            33444444444444444443333

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=1.1e-05  Score=49.02  Aligned_cols=29  Identities=31%  Similarity=0.661  Sum_probs=24.0

Q ss_pred             CCccccccccccccCHHHHHHHHhhhcCC
Q psy6556          18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKT   46 (836)
Q Consensus        18 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   46 (836)
                      +++|.|+.|++.|.....|..|+++|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46888888888888888888888888764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.79  E-value=9.9e-06  Score=47.92  Aligned_cols=26  Identities=23%  Similarity=0.788  Sum_probs=20.8

Q ss_pred             CCccccccccccccCHHHHHHHHhhh
Q psy6556          18 ERTYHCPLCSKQFSKLTTLKRHVGIH   43 (836)
Q Consensus        18 ~~~~~C~~C~~~f~~~~~l~~H~~~h   43 (836)
                      ++||.|+.||+.|.+.+.|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            46788888888888888888888776

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.78  E-value=8.4e-06  Score=48.27  Aligned_cols=26  Identities=31%  Similarity=0.750  Sum_probs=21.0

Q ss_pred             CCccccccccccccCHHHHHHHHhhh
Q psy6556          18 ERTYHCPLCSKQFSKLTTLKRHVGIH   43 (836)
Q Consensus        18 ~~~~~C~~C~~~f~~~~~l~~H~~~h   43 (836)
                      ++||.|+.|++.|...+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            46788888888888888888888776

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.78  E-value=1e-05  Score=48.36  Aligned_cols=28  Identities=32%  Similarity=0.720  Sum_probs=22.5

Q ss_pred             CCccccccccccccCHHHHHHHHhhhcC
Q psy6556          18 ERTYHCPLCSKQFSKLTTLKRHVGIHMK   45 (836)
Q Consensus        18 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (836)
                      +++|.|+.|++.|.+...|..|+++|.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4678888888888888888888887753

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.78  E-value=8.9e-06  Score=48.61  Aligned_cols=23  Identities=26%  Similarity=0.678  Sum_probs=8.9

Q ss_pred             cccCccchhcccchhHHHHHhhc
Q psy6556         778 QRCHKCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       778 ~~C~~C~~~F~~~~~L~~H~~~h  800 (836)
                      |.|++||++|.+++.|..|+++|
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            4 YSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             EECSSSCCEESCHHHHHHHHTTS
T ss_pred             ccCCCCCcccCCHHHHHHHHHhc
Confidence            33333333333333333333333

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.77  E-value=7e-06  Score=48.63  Aligned_cols=23  Identities=30%  Similarity=0.518  Sum_probs=10.5

Q ss_pred             cccCccchhcccchhHHHHHhhc
Q psy6556         778 QRCHKCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       778 ~~C~~C~~~F~~~~~L~~H~~~h  800 (836)
                      |+|++||++|.+++.|..|+++|
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            4 YRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             EEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhc
Confidence            44444444444444444444443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.77  E-value=1.2e-05  Score=48.45  Aligned_cols=26  Identities=23%  Similarity=0.629  Sum_probs=13.0

Q ss_pred             ceecCcccccccchhhhhhHHHhhcc
Q psy6556         746 KYVCNYCGKSYIDKRDYTNHVSVHME  771 (836)
Q Consensus       746 ~~~C~~C~~~f~~~~~l~~H~~~H~~  771 (836)
                      +|.|++||+.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            44555555555555555555555443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.76  E-value=5.8e-06  Score=48.94  Aligned_cols=26  Identities=38%  Similarity=0.885  Sum_probs=16.4

Q ss_pred             CcccccchHhhcCchhHHhhhhhcCC
Q psy6556         599 PFSCLLCNNTFAQLSTLLNHERIHDN  624 (836)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~H~~  624 (836)
                      ||.|++|++.|.+.+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            45666666666666666666666654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.75  E-value=1.8e-05  Score=47.70  Aligned_cols=28  Identities=32%  Similarity=0.791  Sum_probs=23.5

Q ss_pred             CccccccccccccCHHHHHHHHhhhcCC
Q psy6556          19 RTYHCPLCSKQFSKLTTLKRHVGIHMKT   46 (836)
Q Consensus        19 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   46 (836)
                      +||.|++|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4788888999998888888888888764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.75  E-value=6.8e-06  Score=60.59  Aligned_cols=32  Identities=25%  Similarity=0.436  Sum_probs=20.5

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      +.+++||.|.+|++.|.+.+.|..|+++|+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            34566666666666666666666666666664

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.93  E-value=4.1e-06  Score=50.67  Aligned_cols=27  Identities=33%  Similarity=0.682  Sum_probs=15.1

Q ss_pred             CcccccchHhhhchhHHHHHHHHhcCc
Q psy6556         688 PAKCKICNQSFALFSNLNAHYNKHLKV  714 (836)
Q Consensus       688 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  714 (836)
                      ||.|++||++|...+.|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            455555555555555555555555543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.90  E-value=4.6e-06  Score=48.89  Aligned_cols=26  Identities=46%  Similarity=0.851  Sum_probs=18.7

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcC
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHD  623 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~  623 (836)
                      +||.|++||+.|.+.+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            36777777777777777777777663

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.70  E-value=1.9e-05  Score=47.96  Aligned_cols=29  Identities=28%  Similarity=0.518  Sum_probs=20.7

Q ss_pred             CceeccccccccCCcchHHHHHHHhCCCC
Q psy6556         144 KPYACKYCGNAFAHKSSRDAHQNIHTDLK  172 (836)
Q Consensus       144 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  172 (836)
                      +||.|++|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            35777777777777777777777776654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.70  E-value=1.1e-05  Score=49.19  Aligned_cols=28  Identities=32%  Similarity=0.859  Sum_probs=19.7

Q ss_pred             CCcccccchHhhcCchhHHhh-hhhcCCC
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNH-ERIHDNH  625 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H-~~~H~~~  625 (836)
                      +||.|+.|++.|.+.+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            367777777777777777777 5677665

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.68  E-value=1.8e-05  Score=47.57  Aligned_cols=24  Identities=29%  Similarity=0.668  Sum_probs=9.8

Q ss_pred             cccCCcccccccCchhHHHHHHhh
Q psy6556         716 RFSCTNCSLNFTYLSNLIRHRRIK  739 (836)
Q Consensus       716 ~~~C~~C~~~f~~~~~L~~H~~~~  739 (836)
                      ||.|++|++.|...+.|..|+++|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIH   25 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHh
Confidence            344444444444444444444333

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.68  E-value=2e-05  Score=48.82  Aligned_cols=16  Identities=38%  Similarity=0.789  Sum_probs=6.0

Q ss_pred             ccccccCchhHHHHHH
Q psy6556         722 CSLNFTYLSNLIRHRR  737 (836)
Q Consensus       722 C~~~f~~~~~L~~H~~  737 (836)
                      |++.|...+.|..|++
T Consensus        11 C~k~f~~~~~L~~H~~   26 (32)
T 1zfd_A           11 CDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CCCCBSSSHHHHHHHG
T ss_pred             CCCccCCHHHHHHHHH
Confidence            3333333333333333

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.68  E-value=3e-05  Score=57.15  Aligned_cols=29  Identities=21%  Similarity=0.300  Sum_probs=15.0

Q ss_pred             cCcCcccCCcccccccCchhHHHHHHhhc
Q psy6556         712 LKVRRFSCTNCSLNFTYLSNLIRHRRIKH  740 (836)
Q Consensus       712 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~h  740 (836)
                      .+++||+|.+|++.|...+.|.+|+++|+
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            34455555555555555555555555544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.68  E-value=2e-05  Score=47.45  Aligned_cols=28  Identities=39%  Similarity=0.682  Sum_probs=23.6

Q ss_pred             CccccccccccccCHHHHHHHHhhhcCC
Q psy6556          19 RTYHCPLCSKQFSKLTTLKRHVGIHMKT   46 (836)
Q Consensus        19 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   46 (836)
                      ++|.|++|++.|.+...|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4788888998898888888888888765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.66  E-value=2.1e-05  Score=47.34  Aligned_cols=28  Identities=29%  Similarity=0.469  Sum_probs=20.7

Q ss_pred             CceeccccccccCCcchHHHHHHHhCCC
Q psy6556         144 KPYACKYCGNAFAHKSSRDAHQNIHTDL  171 (836)
Q Consensus       144 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  171 (836)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4677777777777777777777777654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.83  E-value=6.4e-06  Score=50.23  Aligned_cols=23  Identities=35%  Similarity=0.823  Sum_probs=8.7

Q ss_pred             eecCcccccccchhhhhhHHHhh
Q psy6556         747 YVCNYCGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       747 ~~C~~C~~~f~~~~~l~~H~~~H  769 (836)
                      |.|++||+.|.....|..|+++|
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h   26 (30)
T 2lvr_A            4 YVCIHCQRQFADPGALQRHVRIH   26 (30)
Confidence            33333333333333333333333

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.63  E-value=3e-05  Score=47.58  Aligned_cols=28  Identities=32%  Similarity=0.749  Sum_probs=24.0

Q ss_pred             Cccccc--cccccccCHHHHHHHHhhhcCC
Q psy6556          19 RTYHCP--LCSKQFSKLTTLKRHVGIHMKT   46 (836)
Q Consensus        19 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   46 (836)
                      +||.|+  .|++.|.+.+.|..|+++|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            478897  8999999999999999888765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.78  E-value=8.1e-06  Score=47.81  Aligned_cols=24  Identities=25%  Similarity=0.623  Sum_probs=13.7

Q ss_pred             ccccCccchhcccchhHHHHHhhc
Q psy6556         777 TQRCHKCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       777 ~~~C~~C~~~F~~~~~L~~H~~~h  800 (836)
                      +|.|++||++|.+++.|..||++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            355555555555555555555554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.53  E-value=2.9e-05  Score=47.15  Aligned_cols=27  Identities=33%  Similarity=0.714  Sum_probs=14.1

Q ss_pred             CccCCccchhcccchhhhhc-cccccCC
Q psy6556         803 QYRCTRCNKTFKQNTSFIRH-SLKHFNS  829 (836)
Q Consensus       803 ~~~C~~C~~~f~~~~~l~~H-~~~H~~~  829 (836)
                      ||.|+.||+.|.+.+.|..| +.+|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45555555555555555555 4555443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.24  E-value=0.00015  Score=43.39  Aligned_cols=26  Identities=35%  Similarity=0.699  Sum_probs=21.2

Q ss_pred             Cccccc--cccccccCHHHHHHHHhhhc
Q psy6556          19 RTYHCP--LCSKQFSKLTTLKRHVGIHM   44 (836)
Q Consensus        19 ~~~~C~--~C~~~f~~~~~l~~H~~~h~   44 (836)
                      ++|.|+  .|++.|.+.+.|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            468888  88888888888888888775

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.22  E-value=0.00013  Score=43.69  Aligned_cols=19  Identities=37%  Similarity=0.730  Sum_probs=8.7

Q ss_pred             ccchhcccchhHHHHHhhc
Q psy6556         782 KCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       782 ~C~~~F~~~~~L~~H~~~h  800 (836)
                      .||++|.+++.|..|+++|
T Consensus         9 ~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            9 NCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             TTCEEESSHHHHHHHHGGG
T ss_pred             cCcCccCCHHHHHHHHHHh
Confidence            4444444444444444444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.98  E-value=0.00091  Score=48.96  Aligned_cols=45  Identities=29%  Similarity=0.524  Sum_probs=24.4

Q ss_pred             ccccccCHHHHHHHH-hhhcCCc------ceecc--cccccccChHHHHHHHHh
Q psy6556          26 CSKQFSKLTTLKRHV-GIHMKTQ------PVRCG--YCGQFFLDLGRLNAHIRQ   70 (836)
Q Consensus        26 C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~   70 (836)
                      |++.|.+...|..|+ ..|.+.+      +|.|.  .|+..+.....|..|++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            556666666666665 3454433      45554  455555555555555553

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.94  E-value=0.00053  Score=50.20  Aligned_cols=47  Identities=26%  Similarity=0.352  Sum_probs=22.6

Q ss_pred             ccccccCchhHHHHHHhhcCCC-----CCceecC--cccccccchhhhhhHHHh
Q psy6556         722 CSLNFTYLSNLIRHRRIKHSQH-----EGKYVCN--YCGKSYIDKRDYTNHVSV  768 (836)
Q Consensus       722 C~~~f~~~~~L~~H~~~~h~~~-----~~~~~C~--~C~~~f~~~~~l~~H~~~  768 (836)
                      |++.|.+...|..|+...|...     ..+|.|.  .|++.+.....|.+|+++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            4455555555555543222111     1245665  466655555566666554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.54  E-value=0.057  Score=48.90  Aligned_cols=69  Identities=20%  Similarity=0.347  Sum_probs=41.6

Q ss_pred             ccccccChHHHHHHHHHhcCCCceeccccccccCCcchHHHHHHHhCCCCCcccCcCCCcccChhhhhhhhhc
Q psy6556         123 CAYRGRYRYHFKAHLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNLC  195 (836)
Q Consensus       123 C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  195 (836)
                      |+.... ...+..|+ ..-.-.+..|+.|+..+ .+..|..|+...-..++..|+.|+..+. ...|..|...
T Consensus        90 C~~~~~-~~~l~~H~-~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~  158 (170)
T 3hcs_A           90 CLHKME-LRHLEDHQ-AHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQN  158 (170)
T ss_dssp             CCCEEE-GGGHHHHH-TTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTT
T ss_pred             CCceec-HhHHHHHH-hcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHh
Confidence            444332 34555665 23344566777777776 5566777776665666667777777663 4556666543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.48  E-value=0.015  Score=49.49  Aligned_cols=22  Identities=23%  Similarity=0.321  Sum_probs=18.7

Q ss_pred             CcccCCcccccccCchhHHHHH
Q psy6556         715 RRFSCTNCSLNFTYLSNLIRHR  736 (836)
Q Consensus       715 ~~~~C~~C~~~f~~~~~L~~H~  736 (836)
                      +++.|.+|...|.+.+.+..|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHH
Confidence            6788888888888888888888

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.09  E-value=0.018  Score=48.96  Aligned_cols=77  Identities=17%  Similarity=0.141  Sum_probs=50.4

Q ss_pred             CCccccccccccccCHHHHHHHH--hhhcCC-cceecccc------cccccChHHHHHHHHhhccCCCccccccCccccc
Q psy6556          18 ERTYHCPLCSKQFSKLTTLKRHV--GIHMKT-QPVRCGYC------GQFFLDLGRLNAHIRQRHTSNKKIYYKCDKCNKT   88 (836)
Q Consensus        18 ~~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~   88 (836)
                      .+++.|.+|+..|.+.+.+..|.  +.|... +.+.+...      +..+....    +.   -.......|.|.+|++.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~C~~C~~~  102 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AE---ISDGEDRSKCCPVCNMT  102 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SC---CSSCCCTTTEETTTTEE
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cc---cccCCCCCeEcCCCCCE
Confidence            36789999999999999999998  566433 23332111      11221110    00   01122346889999999


Q ss_pred             cCChhhHHhhhhh
Q psy6556          89 YKSKYKFERHKNT  101 (836)
Q Consensus        89 f~~~~~l~~H~~~  101 (836)
                      |.+...|..|.+.
T Consensus       103 f~s~~~~~~H~~g  115 (127)
T 1zu1_A          103 FSSPVVAESHYIG  115 (127)
T ss_dssp             CSSHHHHHHHHTS
T ss_pred             eCCHHHHHHHHCC
Confidence            9999999999864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.76  E-value=0.0066  Score=50.23  Aligned_cols=31  Identities=26%  Similarity=0.258  Sum_probs=24.7

Q ss_pred             HHhcCcCcccCCcccccccCchhHHHHHHhh
Q psy6556         709 NKHLKVRRFSCTNCSLNFTYLSNLIRHRRIK  739 (836)
Q Consensus       709 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~  739 (836)
                      ..|+|++||.|..|++.|.+.+.|..|+++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            4577888888888888888888888887653

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.68  E-value=0.043  Score=49.76  Aligned_cols=55  Identities=18%  Similarity=0.356  Sum_probs=29.6

Q ss_pred             CccCCccccccCChhHHHHHHhhhcCCCccccCCCCCCccCChHHHHHHHhhcCCCCC
Q psy6556         250 PFQCKYCNYAFKEKHHLETHVNLHLGKTKSFNCNVCNYSSSLKWNLIQHYRIHTDEKP  307 (836)
Q Consensus       250 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  307 (836)
                      +..|+.|+..+ .+..|..|+...-+. +...|+.|+..+.. ..|..|..++.|+.+
T Consensus       110 ~v~C~~C~~~~-~r~~l~~H~~~~C~~-r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          110 LMDCPQCQRPF-QKFHINIHILKDCPR-RQVSCDNCAASMAF-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             EEECTTTCCEE-EGGGHHHHHHHTCTT-CEEECTTTCCEEEG-GGHHHHHTTCCC---
T ss_pred             eeECCCCChHH-HHHHHHHHhhhhCCC-CCeECCCCCCccCH-HHHHhHHHhCcChhh
Confidence            44566666665 455566666544332 45566666665543 345666666655543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.62  E-value=0.032  Score=36.21  Aligned_cols=28  Identities=32%  Similarity=0.572  Sum_probs=24.0

Q ss_pred             ccCCCccccccccccccCHHHHHHHHhh
Q psy6556          15 SQDERTYHCPLCSKQFSKLTTLKRHVGI   42 (836)
Q Consensus        15 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~   42 (836)
                      .++-.+|.||.|+..|.....|+.||..
T Consensus         7 ~~~~~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A            7 GQDGGRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCSSCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             cccCCceeCCcccccccchHHHHhhhhh
Confidence            3455899999999999999999999973

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.34  E-value=0.0064  Score=50.32  Aligned_cols=29  Identities=24%  Similarity=0.305  Sum_probs=19.3

Q ss_pred             hhcCCCCcccccchHhhcCchhHHhhhhh
Q psy6556         593 IHGKDRPFSCLLCNNTFAQLSTLLNHERI  621 (836)
Q Consensus       593 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  621 (836)
                      .++|++||.|..|++.|.+.+.|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            35566677777777777777777777654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.49  E-value=0.036  Score=35.97  Aligned_cols=22  Identities=41%  Similarity=0.815  Sum_probs=17.6

Q ss_pred             ccccCccchhcccchhHHHHHh
Q psy6556         777 TQRCHKCNATFRIKKFLTRHMK  798 (836)
Q Consensus       777 ~~~C~~C~~~F~~~~~L~~H~~  798 (836)
                      +|.|+.|+..|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            5778888888888888888887

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.52  E-value=0.17  Score=30.80  Aligned_cols=27  Identities=19%  Similarity=0.242  Sum_probs=16.6

Q ss_pred             ceecccccccccChHHHHHHHHhhccC
Q psy6556          48 PVRCGYCGQFFLDLGRLNAHIRQRHTS   74 (836)
Q Consensus        48 ~~~C~~C~~~f~~~~~l~~H~~~~h~~   74 (836)
                      .|.|++|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            366666666666666666666655543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.22  E-value=0.29  Score=29.78  Aligned_cols=27  Identities=26%  Similarity=0.338  Sum_probs=20.8

Q ss_pred             cccCccccccccChHHHHHHHHHHhCC
Q psy6556         506 KHPCNRCNASFSSMVQLSCHQIRAHGK  532 (836)
Q Consensus       506 ~~~C~~C~~~f~~~~~L~~H~~~~h~~  532 (836)
                      .|.|++|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            377888888888888888887777754

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=83.51  E-value=0.17  Score=36.95  Aligned_cols=14  Identities=21%  Similarity=0.800  Sum_probs=10.6

Q ss_pred             CccCCccchhcccc
Q psy6556         803 QYRCTRCNKTFKQN  816 (836)
Q Consensus       803 ~~~C~~C~~~f~~~  816 (836)
                      .|+|+.||+.|.-+
T Consensus        51 ~FkCP~CgEEFyG~   64 (95)
T 2k5c_A           51 VFKCPVCGEEFYGK   64 (95)
T ss_dssp             EEECTTTCCEEETT
T ss_pred             hhcCCCccHHHhcc
Confidence            38899998888643

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=82.84  E-value=0.83  Score=33.83  Aligned_cols=49  Identities=22%  Similarity=0.485  Sum_probs=34.8

Q ss_pred             CceeccccccccCCcchHHHHHHHhCCCCCcccCcCCCcccChhhhhhhhh
Q psy6556         144 KPYACKYCGNAFAHKSSRDAHQNIHTDLKPYLCLTCGQSFRTFNLMKRHNL  194 (836)
Q Consensus       144 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  194 (836)
                      -.|.|..||.++. +..|..|...-.+...|.|..|++.|.. ..++.|..
T Consensus         9 V~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A            9 VFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             CEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             eEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEee
Confidence            3478888887764 5678888776655557888888888874 55666643

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=81.97  E-value=1.5  Score=26.68  Aligned_cols=25  Identities=20%  Similarity=0.353  Sum_probs=17.2

Q ss_pred             CCCccccccccccccCHHHHHHHHh
Q psy6556          17 DERTYHCPLCSKQFSKLTTLKRHVG   41 (836)
Q Consensus        17 ~~~~~~C~~C~~~f~~~~~l~~H~~   41 (836)
                      +...+.|..|+-+|++...+..|.+
T Consensus         5 ~~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            5 EVMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCCSEETTTTEECSSHHHHHHHHH
T ss_pred             ccCcCeeccccceehhhHHHhhhhe
Confidence            4556677777777777777777765

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=81.65  E-value=1.3  Score=25.81  Aligned_cols=24  Identities=33%  Similarity=0.768  Sum_probs=16.2

Q ss_pred             ecccccccccChHHHHHHHHhhcc
Q psy6556          50 RCGYCGQFFLDLGRLNAHIRQRHT   73 (836)
Q Consensus        50 ~C~~C~~~f~~~~~l~~H~~~~h~   73 (836)
                      .|.+|.+.+.+..+|..|++..|.
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            467777777777777777766553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	836
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	9e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	6e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.004
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.003
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.004
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	7e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.001
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.001
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.003
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.002
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.003
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.003
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (100), Expect = 3e-06
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 300 RIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIHNMNF 335
           R HT EKP+ CS C+K FRQK  +  H +  H+ NF
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAHQNIHTD 170
           R H   KPYAC +C   F  K   D H   + D
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 245 HTGERPFQCKYCNYAFKEKHHLETHVNLH 273
           HTGE+P+ C +C+  F++K  L+ H   +
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 592 RIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDN 624
           R H  ++P++C  C+ TF Q   L  H + + +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (97), Expect = 9e-06
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 300 RIHTDEKPFNCSLCEKQFRQKIHVKNHLRIIH 331
           R H+ EKP+ C +C  +F Q   +K H+   H
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 8/26 (30%), Positives = 17/26 (65%)

Query: 245 HTGERPFQCKYCNYAFKEKHHLETHV 270
           H+GE+P++C  C+  F +   ++ H+
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHI 28

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 1/34 (2%)

Query: 138 RIHLNIKPYACKYCGNAFAHKSSRDAH-QNIHTD 170
           R H   KPY C  C   F    +   H    HT+
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 5e-05
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 245 HTGERPFQCKYCNYAFKEKHHLETHVNLHLG 275
           H+GE+P+ C  C  AF     L  H  +H G
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 6e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 301 IHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           IH+ EKP+ C  C K F +   +  H R+
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRV 29

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 9e-05
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 139 IHLNIKPYACKYCGNAFAHKSSRDAHQNIHT 169
           IH   KPY C  CG AF+  S    HQ +HT
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 0.003
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query: 593 IHGKDRPFSCLLCNNTFAQLSTLLNHERIH 622
           IH  ++P+ C+ C   F++ S L+ H+R+H
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 8e-05
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 144 KPYACKYCGNAFAHKSSRDAH-QNIHTDLKPYLC 176
           KPY C+ CG  F+     + H + +HT  +P+ C
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 278 KSFNCNVCNYSSSLKWNLIQHYR-IHTDEKPFNCSL 312
           K + C  C    S   +L  H + +HT E+P  C +
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 8e-04
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 394 PSICAVCGDTFKTNYNYFVHMRR-HTGFKPYQCK 426
           P IC  CG  F    +   H+++ HT  +P++C+
Sbjct: 5   PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 597 DRPFSCLLCNNTFAQLSTLLNHER-IHDNHKPYKC 630
            +P+ C  C   F++   L  H + +H + +P+KC
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 0.002
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 229 KPYKQLSNLQSHIRISHTGERPFQCK 254
           K + +  +L  HI+  HT ERP +C+
Sbjct: 13  KGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 303 TDEKPFNCSLCEKQFRQKIHVKNHLRIIH 331
           +  KP+ C  C K F +  H+  H++ +H
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (89), Expect = 1e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 298 HYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
             R  T  KPF C  C++ F +  H+  H + 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 6e-04
 Identities = 9/34 (26%), Positives = 13/34 (38%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHT 169
             R    IKP+ C  C  +F+       H+  H 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 0.001
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 240 HIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLG 275
             R   TG +PFQC  C+ +F    HL  H   H+ 
Sbjct: 2   STRG-STGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 0.002
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIH 622
             R     +PF C  C+ +F++   L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 0.004
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 413 HMRRHTGFKPYQCKTCNASYASMRVLQHHEITH 445
             R  TG KP+QC  C+ S++    L  H   H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 136 HLRIHLNIKPYACKYCGNAFAHKSSRDAHQNIHT 169
                   + Y C  CG +F+H S    H+  HT
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 6/33 (18%), Positives = 11/33 (33%)

Query: 297 QHYRIHTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
           +      + + + C  C K F     +  H R 
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 0.001
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 590 HMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIH 622
                 + R + C  C  +F+  S L  H R H
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (78), Expect = 0.003
 Identities = 8/34 (23%), Positives = 14/34 (41%)

Query: 413 HMRRHTGFKPYQCKTCNASYASMRVLQHHEITHS 446
              +    + Y+C  C  S++    L  H  TH+
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (77), Expect = 0.004
 Identities = 8/36 (22%), Positives = 11/36 (30%), Gaps = 1/36 (2%)

Query: 240 HIRISHTGERPFQCKYCNYAFKEKHHLETHVNLHLG 275
                    R ++C  C  +F     L  H   H G
Sbjct: 3   SEWQ-QRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.3 bits (82), Expect = 7e-04
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHT 169
           KP+ C+ C   F+       H   HT
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 0.001
 Identities = 14/26 (53%), Positives = 15/26 (57%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHT 169
           KPY C  CG AF+  S    HQ IHT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.5 bits (80), Expect = 0.001
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 144 KPYACKYCGNAFAHKSSRDAHQNIHT 169
           + + C+ C  AFA +     H   HT
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHT 26

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.8 bits (78), Expect = 0.003
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 278 KSFNCNVCNYSSSLKWNLIQHYRIHTDEK 306
           +SF C VC  + + + +L +HYR HT+EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 0.002
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 397 CAVCGDTFKTNYNYFVHMRRHTGFKPYQCK 426
              CG +F    +   HM+ H+  + Y C+
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 279 SFNCN--VCNYSSSLKWNLIQHYRIHTDEKPFNC 310
           SF+C    C  S + K +L +H ++H+D + + C
Sbjct: 1   SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (78), Expect = 0.003
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 245 HTGERPFQCKYCNYAFKEKHHLETHVNLH 273
            +G+RPF C+ C  AF  K +   H+ +H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (78), Expect = 0.003
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 302 HTDEKPFNCSLCEKQFRQKIHVKNHLRI 329
            + ++PF C +C   F  K +   HL++
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKV 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 278 KSFNCNVCNYSSSLKWNLIQHYRIHTDEK 306
           K F C  C        +L +H + H ++K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	836
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.53
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.51
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.19
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.1
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.09
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.06
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.01
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.01
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.99
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.98
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.96
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.94
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.93
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.91
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.89
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.85
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.85
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.83
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.78
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.78
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.76
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.76
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.76
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.72
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.72
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.71
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.61
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.58
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.58
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.53
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.5
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.43
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.4
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.36
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.26
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.23
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.17
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.15
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.14
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.13
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.09
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.09
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.01
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.97
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.94
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.94
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.76
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.63
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.47
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.38
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.36
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.36
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.34
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.33
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.31
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.3
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.17
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.12
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.12
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.09
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.03
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.97
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.94
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.9
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.88
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.88
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.83
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.8
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.76
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.68
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.63
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.63
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.63
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.62
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.6
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.52
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.4
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.38
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.24
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.77
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.72
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.57
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.38
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.34
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.24
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.22
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.1
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.86
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.76
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.61
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.51
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.41
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.64
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.57
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.75
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.46
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.4
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.29
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.94
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.3
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.93
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	89.51
d1y0jb1	36	U-shaped transcription factor, different fingers {	88.64
d1y0jb1	36	U-shaped transcription factor, different fingers {	87.93
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.01
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	86.7
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	86.65
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	85.93
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	85.92
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	85.24
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.94
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	81.89
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	81.76

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=6.7e-16  Score=108.04  Aligned_cols=53  Identities=25%  Similarity=0.565  Sum_probs=50.9

Q ss_pred             CCCcccccchHhhcCchhHHhhhhhcCCCccccCCccchhhcchhhHHHHhhhh
Q psy6556         597 DRPFSCLLCNNTFAQLSTLLNHERIHDNHKPYKCTKCNYSARVLSNKLAHERIY  650 (836)
Q Consensus       597 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h  650 (836)
                      |+||+|+ ||++|++.+.|..|+++|+|++||.|++||++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 9999999999999999999999999999999999999999999876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=4.1e-15  Score=103.93  Aligned_cols=53  Identities=36%  Similarity=0.777  Sum_probs=32.1

Q ss_pred             CCceecCcccccccchhhhhhHHHhhcccCCCCccccCccchhcccchhHHHHHhhc
Q psy6556         744 EGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       744 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~h  800 (836)
                      |++|.|+ ||+.|.....|..|+++|++++   ||+|++||++|.+++.|..||++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ek---py~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLR---PYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCC---SEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhcccccc---CCcCCCcCCEecCHHHHHHHHhcC
Confidence            4566663 6666666666666666666555   366666666666666666666655

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1.7e-12  Score=81.03  Aligned_cols=37  Identities=27%  Similarity=0.701  Sum_probs=30.9

Q ss_pred             CCCCcccccchHhhcCchhHHhhhh-hcCCCccccCCc
Q psy6556         596 KDRPFSCLLCNNTFAQLSTLLNHER-IHDNHKPYKCTK  632 (836)
Q Consensus       596 ~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~  632 (836)
                      .++||+|++||++|++.++|.+|++ +|+|++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4688888888888888888888875 688888888864

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=5.9e-12  Score=79.07  Aligned_cols=35  Identities=26%  Similarity=0.382  Sum_probs=18.5

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhcc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQ  652 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  652 (836)
                      |+++|++++||+|+.||++|...++|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            45555555555555555555555555555555544

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.4e-11  Score=77.38  Aligned_cols=37  Identities=24%  Similarity=0.454  Sum_probs=35.6

Q ss_pred             hhhhhhcCCCCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         589 IHMRIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       589 ~h~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      .|+++|++++||.|++||++|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5889999999999999999999999999999999997

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1e-11  Score=74.17  Aligned_cols=31  Identities=32%  Similarity=0.914  Sum_probs=15.4

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCC
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDN  624 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  624 (836)
                      |++++||+|.+||++|.+.+.|..|+++|+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            4444555555555555555555555544444

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=7.5e-11  Score=73.52  Aligned_cols=37  Identities=30%  Similarity=0.692  Sum_probs=33.4

Q ss_pred             CCCccccccccccccCHHHHHHHHh-hhcCCcceeccc
Q psy6556          17 DERTYHCPLCSKQFSKLTTLKRHVG-IHMKTQPVRCGY   53 (836)
Q Consensus        17 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   53 (836)
                      .++||+|++||+.|...+.|..|++ +|++++||.|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4789999999999999999999985 799999999974

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=5.6e-11  Score=70.91  Aligned_cols=33  Identities=30%  Similarity=0.600  Sum_probs=31.7

Q ss_pred             hcCCCccccCCccchhhcchhhHHHHhhhhccC
Q psy6556         621 IHDNHKPYKCTKCNYSARVLSNKLAHERIYHQD  653 (836)
Q Consensus       621 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  653 (836)
                      +|+|++||+|..|+++|...++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=7.9e-11  Score=72.61  Aligned_cols=34  Identities=32%  Similarity=0.602  Sum_probs=21.2

Q ss_pred             hhcCCCccccCCccchhhcchhhHHHHhhhhccC
Q psy6556         620 RIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQD  653 (836)
Q Consensus       620 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  653 (836)
                      |+|+||+||+|++|+++|...++|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4566666666666666666666666666666543

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=7.4e-11  Score=73.36  Aligned_cols=34  Identities=21%  Similarity=0.347  Sum_probs=22.4

Q ss_pred             hhhhcCCCccccCCccchhhcchhhHHHHhhhhc
Q psy6556         618 HERIHDNHKPYKCTKCNYSARVLSNKLAHERIYH  651 (836)
Q Consensus       618 H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  651 (836)
                      |.|+|+||+||+|++|+++|..+++|..|+++|-
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            5566666666666666666666666666666653

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=5.3e-11  Score=73.40  Aligned_cols=34  Identities=29%  Similarity=0.559  Sum_probs=32.5

Q ss_pred             hhhcCCCCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         592 RIHGKDRPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       592 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      |+|+|++||+|++||++|.+.+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5899999999999999999999999999999976

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.5e-10  Score=71.19  Aligned_cols=34  Identities=26%  Similarity=0.446  Sum_probs=25.4

Q ss_pred             hhcCCCccccCCccchhhcchhhHHHHhhhhccC
Q psy6556         620 RIHDNHKPYKCTKCNYSARVLSNKLAHERIYHQD  653 (836)
Q Consensus       620 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  653 (836)
                      |+|+||+||+|++|+++|..+++|..|++.+|++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            5677788888888888888888887777666554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=1.1e-10  Score=72.59  Aligned_cols=34  Identities=21%  Similarity=0.478  Sum_probs=26.3

Q ss_pred             HHHHhcCcCcccCCcccccccCchhHHHHHHhhc
Q psy6556         707 HYNKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKH  740 (836)
Q Consensus       707 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h  740 (836)
                      |.|.|+|+|||+|++|+++|+++++|.+|+++|-
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            5677888888888888888888888888877663

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.91  E-value=1.2e-10  Score=67.38  Aligned_cols=29  Identities=41%  Similarity=0.753  Sum_probs=22.5

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcCCCc
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHDNHK  626 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  626 (836)
                      +||.|++|+++|.+.+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57778888888888888888888887774

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=1.4e-10  Score=70.16  Aligned_cols=31  Identities=26%  Similarity=0.666  Sum_probs=17.2

Q ss_pred             hcCCCCcccccchHhhcCchhHHhhhhhcCC
Q psy6556         594 HGKDRPFSCLLCNNTFAQLSTLLNHERIHDN  624 (836)
Q Consensus       594 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  624 (836)
                      |+|++||+|++|++.|.+++.|..|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3455555555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=2.5e-10  Score=65.77  Aligned_cols=29  Identities=31%  Similarity=0.647  Sum_probs=21.6

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcCCCc
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHDNHK  626 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  626 (836)
                      +||.|++||++|.+++.|..|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=3.7e-10  Score=69.35  Aligned_cols=33  Identities=24%  Similarity=0.419  Sum_probs=26.9

Q ss_pred             HHhcCcCcccCCcccccccCchhHHHHHHhhcC
Q psy6556         709 NKHLKVRRFSCTNCSLNFTYLSNLIRHRRIKHS  741 (836)
Q Consensus       709 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~  741 (836)
                      |+|+|+|||+|++|++.|+.+++|.+|++.+|+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            468888888888888888888888888877764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=6.1e-10  Score=67.35  Aligned_cols=32  Identities=16%  Similarity=0.366  Sum_probs=30.2

Q ss_pred             cCCCccccCCccchhhcchhhHHHHhhhhccC
Q psy6556         622 HDNHKPYKCTKCNYSARVLSNKLAHERIYHQD  653 (836)
Q Consensus       622 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  653 (836)
                      |+||+||+|++|++.|..+++|..|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            79999999999999999999999999999764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=2.9e-10  Score=69.50  Aligned_cols=33  Identities=30%  Similarity=0.688  Sum_probs=26.1

Q ss_pred             ccccc--chHhhcCchhHHhhhhhcCCCccccCCc
Q psy6556         600 FSCLL--CNNTFAQLSTLLNHERIHDNHKPYKCTK  632 (836)
Q Consensus       600 ~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~  632 (836)
                      |.|++  |+++|.+++.|++|+++|+|++||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            56776  8888888888888888888888888863

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.78  E-value=7.8e-10  Score=63.87  Aligned_cols=27  Identities=30%  Similarity=0.677  Sum_probs=14.9

Q ss_pred             CcccccchHhhhchhHHHHHHHHhcCc
Q psy6556         688 PAKCKICNQSFALFSNLNAHYNKHLKV  714 (836)
Q Consensus       688 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  714 (836)
                      ||+|++||++|...+.|+.|+++|+||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            455555555555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=1.5e-09  Score=61.73  Aligned_cols=24  Identities=21%  Similarity=0.650  Sum_probs=9.3

Q ss_pred             ceecCcccccccchhhhhhHHHhh
Q psy6556         746 KYVCNYCGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       746 ~~~C~~C~~~f~~~~~l~~H~~~H  769 (836)
                      ||+|++||+.|..++.|..|+++|
T Consensus         3 Py~C~~C~k~F~~~~~L~~H~r~H   26 (28)
T d1a1ia2           3 PFQCRICMRNFSRSDHLTTHIRTH   26 (28)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CccCCCCcCEecccccccccCCCc
Confidence            333333333333333333333333

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=3.4e-10  Score=74.29  Aligned_cols=38  Identities=16%  Similarity=0.216  Sum_probs=18.3

Q ss_pred             HHhhhhhcCCCccccCCc--cchhhcchhhHHHHhhhhccC
Q psy6556         615 LLNHERIHDNHKPYKCTK--CNYSARVLSNKLAHERIYHQD  653 (836)
Q Consensus       615 L~~H~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  653 (836)
                      |..|++ |+|++||+|++  |+++|...++|..|+++|+|+
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            344442 45555555544  555555555555555555444

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=7.8e-10  Score=72.58  Aligned_cols=42  Identities=21%  Similarity=0.522  Sum_probs=37.9

Q ss_pred             chhhhhhhhhhcCCCCccccc--chHhhcCchhHHhhhhhcCCCc
Q psy6556         584 KTNFNIHMRIHGKDRPFSCLL--CNNTFAQLSTLLNHERIHDNHK  626 (836)
Q Consensus       584 ~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  626 (836)
                      ...+..|+. |++++||.|++  |+++|.+++.|..|+++|+||+
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            456777775 99999999988  9999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=1.6e-09  Score=66.22  Aligned_cols=33  Identities=27%  Similarity=0.586  Sum_probs=26.7

Q ss_pred             ccccc--chHhhhchhHHHHHHHHhcCcCcccCCc
Q psy6556         689 AKCKI--CNQSFALFSNLNAHYNKHLKVRRFSCTN  721 (836)
Q Consensus       689 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~  721 (836)
                      |.|++  ||++|.+.+.|+.|+++|+|+|||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            56766  8888888888888888888888888863

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2e-09  Score=61.91  Aligned_cols=27  Identities=22%  Similarity=0.421  Sum_probs=14.1

Q ss_pred             CcccccchHhhhchhHHHHHHHHhcCc
Q psy6556         688 PAKCKICNQSFALFSNLNAHYNKHLKV  714 (836)
Q Consensus       688 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  714 (836)
                      ||.|++||++|.+++.|..|+++|+|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            455555555555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.71  E-value=2.5e-09  Score=60.76  Aligned_cols=28  Identities=25%  Similarity=0.749  Sum_probs=25.6

Q ss_pred             CCccccccccccccCHHHHHHHHhhhcC
Q psy6556          18 ERTYHCPLCSKQFSKLTTLKRHVGIHMK   45 (836)
Q Consensus        18 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (836)
                      |+||+|++|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999975

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=6.7e-09  Score=57.19  Aligned_cols=24  Identities=38%  Similarity=0.783  Sum_probs=10.5

Q ss_pred             cccCCcccccccCchhHHHHHHhh
Q psy6556         716 RFSCTNCSLNFTYLSNLIRHRRIK  739 (836)
Q Consensus       716 ~~~C~~C~~~f~~~~~L~~H~~~~  739 (836)
                      ||+|++||++|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            444444444444444444444433

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=5.2e-09  Score=60.55  Aligned_cols=28  Identities=29%  Similarity=0.765  Sum_probs=20.0

Q ss_pred             CCccccc--chHhhcCchhHHhhhhhcCCC
Q psy6556         598 RPFSCLL--CNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       598 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      +||.|++  |+++|.+++.|+.|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4677777  777777777777777777765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.1e-08  Score=56.32  Aligned_cols=24  Identities=25%  Similarity=0.575  Sum_probs=12.3

Q ss_pred             ccccCccchhcccchhHHHHHhhc
Q psy6556         777 TQRCHKCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       777 ~~~C~~C~~~F~~~~~L~~H~~~h  800 (836)
                      ||+|++||++|.+++.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            355555555555555555555544

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=9.6e-09  Score=60.20  Aligned_cols=29  Identities=38%  Similarity=0.827  Sum_probs=21.1

Q ss_pred             CCcccc--cchHhhcCchhHHhhhhhcCCCc
Q psy6556         598 RPFSCL--LCNNTFAQLSTLLNHERIHDNHK  626 (836)
Q Consensus       598 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  626 (836)
                      +||.|+  .|+++|++.++|..|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            467775  37777777777777777777764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=5e-09  Score=60.82  Aligned_cols=28  Identities=36%  Similarity=0.765  Sum_probs=15.7

Q ss_pred             CCccccc--chHhhcCchhHHhhhhhcCCC
Q psy6556         598 RPFSCLL--CNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       598 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      +||.|++  |+++|.++++|..|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3555555  555555555555555555553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=3.4e-08  Score=57.06  Aligned_cols=26  Identities=35%  Similarity=0.814  Sum_probs=13.0

Q ss_pred             Cccccc--chHhhhchhHHHHHHHHhcC
Q psy6556         688 PAKCKI--CNQSFALFSNLNAHYNKHLK  713 (836)
Q Consensus       688 ~~~C~~--C~~~f~~~~~L~~H~~~h~~  713 (836)
                      ||+|++  ||++|.+.+.|+.|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            444544  55555555555555555544

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=5.8e-08  Score=56.25  Aligned_cols=19  Identities=32%  Similarity=0.665  Sum_probs=8.1

Q ss_pred             ccccccchhhhhhHHHhhc
Q psy6556         752 CGKSYIDKRDYTNHVSVHM  770 (836)
Q Consensus       752 C~~~f~~~~~l~~H~~~H~  770 (836)
                      ||++|...+.|..|+++|+
T Consensus        10 Cgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3          10 CGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CCCEESCHHHHHHHHHHHH
T ss_pred             CCceECcHHHcCccccccC
Confidence            4444444444444444443

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=5.1e-08  Score=57.06  Aligned_cols=27  Identities=26%  Similarity=0.520  Sum_probs=14.2

Q ss_pred             Ccccc--cchHhhhchhHHHHHHHHhcCc
Q psy6556         688 PAKCK--ICNQSFALFSNLNAHYNKHLKV  714 (836)
Q Consensus       688 ~~~C~--~C~~~f~~~~~L~~H~~~h~~~  714 (836)
                      ||.|+  .||++|++.++|+.|+++|+|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            45553  2555555555555555555554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.26  E-value=1.2e-07  Score=55.63  Aligned_cols=28  Identities=36%  Similarity=0.873  Sum_probs=18.5

Q ss_pred             CCCccccc--chHhhcCchhHHhhhhhcCC
Q psy6556         597 DRPFSCLL--CNNTFAQLSTLLNHERIHDN  624 (836)
Q Consensus       597 ~~~~~C~~--C~~~f~~~~~L~~H~~~H~~  624 (836)
                      |+||.|++  |+++|.+.++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            45666666  66666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.23  E-value=5e-08  Score=55.76  Aligned_cols=26  Identities=35%  Similarity=0.879  Sum_probs=13.5

Q ss_pred             Cccccc--chHhhcCchhHHhhhhhcCC
Q psy6556         599 PFSCLL--CNNTFAQLSTLLNHERIHDN  624 (836)
Q Consensus       599 ~~~C~~--C~~~f~~~~~L~~H~~~H~~  624 (836)
                      ||.|++  |+++|.+.++|..|+|+|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            455544  55555555555555555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.17  E-value=4.3e-07  Score=53.25  Aligned_cols=15  Identities=40%  Similarity=0.782  Sum_probs=5.4

Q ss_pred             ccccccCchhHHHHH
Q psy6556         722 CSLNFTYLSNLIRHR  736 (836)
Q Consensus       722 C~~~f~~~~~L~~H~  736 (836)
                      |+++|+..++|.+|+
T Consensus        11 C~k~F~r~~~L~~H~   25 (32)
T d1zfda_          11 CDKAFVRNHDLIRHK   25 (32)
T ss_dssp             CCCCBSSSHHHHHHH
T ss_pred             CCCeeCCHHHHHHHh
Confidence            333333333333333

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=3.4e-07  Score=51.53  Aligned_cols=24  Identities=33%  Similarity=0.541  Sum_probs=12.9

Q ss_pred             ccccCc--cchhcccchhHHHHHhhc
Q psy6556         777 TQRCHK--CNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       777 ~~~C~~--C~~~F~~~~~L~~H~~~h  800 (836)
                      ||+|+.  ||++|++.+.|++|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            355544  555555555555555555

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.14  E-value=4e-07  Score=51.94  Aligned_cols=18  Identities=28%  Similarity=0.779  Sum_probs=6.9

Q ss_pred             ccccccchhhhhhHHHhh
Q psy6556         752 CGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       752 C~~~f~~~~~l~~H~~~H  769 (836)
                      ||++|...++|..|+++|
T Consensus        10 C~k~F~~~~~L~~H~r~H   27 (29)
T d1a1ia1          10 CDRRFSRSADLTRHIRIH   27 (29)
T ss_dssp             CCCEESSHHHHHHHTHHH
T ss_pred             CCcEECchhHhhhhcCcc
Confidence            333333333333333333

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=3.3e-07  Score=47.14  Aligned_cols=26  Identities=31%  Similarity=0.703  Sum_probs=20.6

Q ss_pred             CcccccchHhhcCchhHHhhhhhcCC
Q psy6556         599 PFSCLLCNNTFAQLSTLLNHERIHDN  624 (836)
Q Consensus       599 ~~~C~~C~~~f~~~~~L~~H~~~H~~  624 (836)
                      |.+|++|++.|+++..|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45788888888888888888888875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=6.8e-07  Score=45.97  Aligned_cols=25  Identities=32%  Similarity=0.620  Sum_probs=16.5

Q ss_pred             cccCccchhcccchhHHHHHhhcCC
Q psy6556         778 QRCHKCNATFRIKKFLTRHMKTHLI  802 (836)
Q Consensus       778 ~~C~~C~~~F~~~~~L~~H~~~h~~  802 (836)
                      .+|++|++.|+++..|..||+.|++
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4566666666666666666666653

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=6.2e-07  Score=50.47  Aligned_cols=17  Identities=29%  Similarity=0.446  Sum_probs=7.1

Q ss_pred             ccccccCchhHHHHHHh
Q psy6556         722 CSLNFTYLSNLIRHRRI  738 (836)
Q Consensus       722 C~~~f~~~~~L~~H~~~  738 (836)
                      ||++|+..++|.+|+++
T Consensus        10 C~K~F~~~~~L~~H~r~   26 (28)
T d1ubdc4          10 CNKKFAQSTNLKSHILT   26 (28)
T ss_dssp             CCCCCSSTTTTHHHHHH
T ss_pred             cCCcCCCHHHHHHHHhh
Confidence            44444444444444433

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=4.7e-07  Score=47.85  Aligned_cols=27  Identities=37%  Similarity=0.646  Sum_probs=14.6

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcCC
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHDN  624 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~~  624 (836)
                      +||+|.+|+..-..++.|..|+|.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            455555555555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.01  E-value=4.9e-07  Score=48.38  Aligned_cols=27  Identities=33%  Similarity=0.784  Sum_probs=19.6

Q ss_pred             CCCcccccchHhhcCchhHHhhhhhcC
Q psy6556         597 DRPFSCLLCNNTFAQLSTLLNHERIHD  623 (836)
Q Consensus       597 ~~~~~C~~C~~~f~~~~~L~~H~~~H~  623 (836)
                      ++||.|++||+.|+++....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            467777777777777777777777763

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=6.4e-07  Score=48.53  Aligned_cols=29  Identities=31%  Similarity=0.730  Sum_probs=24.1

Q ss_pred             CCCcccccchHhhcCchhHHhhhhhcCCC
Q psy6556         597 DRPFSCLLCNNTFAQLSTLLNHERIHDNH  625 (836)
Q Consensus       597 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  625 (836)
                      ++||.|++|+..|+++..+..|+|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57888888888888888888888888763

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=1.6e-06  Score=45.83  Aligned_cols=29  Identities=34%  Similarity=0.647  Sum_probs=26.9

Q ss_pred             CccccCCccchhhcchhhHHHHhhhhccC
Q psy6556         625 HKPYKCTKCNYSARVLSNKLAHERIYHQD  653 (836)
Q Consensus       625 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  653 (836)
                      |+||+|..|++..+..+.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.94  E-value=2.4e-06  Score=45.72  Aligned_cols=25  Identities=20%  Similarity=0.769  Sum_probs=12.1

Q ss_pred             CceecCcccccccchhhhhhHHHhh
Q psy6556         745 GKYVCNYCGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       745 ~~~~C~~C~~~f~~~~~l~~H~~~H  769 (836)
                      +||.|++||+.|...-....|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4444444444444444444444444

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=1.8e-06  Score=47.96  Aligned_cols=32  Identities=28%  Similarity=0.674  Sum_probs=28.4

Q ss_pred             CCcccccchHhhcCchhHHhhhhhcCCCcccc
Q psy6556         598 RPFSCLLCNNTFAQLSTLLNHERIHDNHKPYK  629 (836)
Q Consensus       598 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  629 (836)
                      +...|+.||+.|.....|.+|...|++|+||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            34579999999999999999999999999983

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=3.7e-06  Score=46.73  Aligned_cols=31  Identities=29%  Similarity=0.501  Sum_probs=27.3

Q ss_pred             CccCCccchhcccchhhhhccccccCCCCCC
Q psy6556         803 QYRCTRCNKTFKQNTSFIRHSLKHFNSSNSD  833 (836)
Q Consensus       803 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~  833 (836)
                      ...|++||+.|..-..|.+|...|++|+|+.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            3579999999999999999999999999873

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.7e-05  Score=42.96  Aligned_cols=29  Identities=31%  Similarity=0.745  Sum_probs=22.3

Q ss_pred             CCccccccccccccCHHHHHHHHhhhcCC
Q psy6556          18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKT   46 (836)
Q Consensus        18 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   46 (836)
                      |+||.|++|+..|..+..+..|++.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            56788888888888888888888777653

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=3.1e-05  Score=42.09  Aligned_cols=24  Identities=38%  Similarity=0.778  Sum_probs=12.7

Q ss_pred             ceecCc--ccccccchhhhhhHHHhh
Q psy6556         746 KYVCNY--CGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       746 ~~~C~~--C~~~f~~~~~l~~H~~~H  769 (836)
                      ||.|.+  |+++|++.++|++|++.+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhh
Confidence            455555  555555555555555543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=5.4e-05  Score=39.61  Aligned_cols=26  Identities=50%  Similarity=0.825  Sum_probs=20.5

Q ss_pred             CceeccccccccCCcchHHHHHHHhC
Q psy6556         144 KPYACKYCGNAFAHKSSRDAHQNIHT  169 (836)
Q Consensus       144 ~~~~C~~C~~~f~~~~~L~~H~~~h~  169 (836)
                      +||+|..|++.-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            67888888888888888888888774

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=2.1e-05  Score=41.89  Aligned_cols=27  Identities=26%  Similarity=0.436  Sum_probs=21.0

Q ss_pred             cccccchHhhcCchhHHhhhhhcCCCc
Q psy6556         600 FSCLLCNNTFAQLSTLLNHERIHDNHK  626 (836)
Q Consensus       600 ~~C~~C~~~f~~~~~L~~H~~~H~~~~  626 (836)
                      |.|++||...+..+.|+.|+|.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888887764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=5.5e-05  Score=40.31  Aligned_cols=26  Identities=23%  Similarity=0.574  Sum_probs=18.0

Q ss_pred             eecCcccccccchhhhhhHHHhhccc
Q psy6556         747 YVCNYCGKSYIDKRDYTNHVSVHMER  772 (836)
Q Consensus       747 ~~C~~C~~~f~~~~~l~~H~~~H~~~  772 (836)
                      |.|++||......+-|++|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.34  E-value=5.6e-05  Score=39.02  Aligned_cols=25  Identities=24%  Similarity=0.428  Sum_probs=14.6

Q ss_pred             ecCcccccccchhhhhhHHHhhccc
Q psy6556         748 VCNYCGKSYIDKRDYTNHVSVHMER  772 (836)
Q Consensus       748 ~C~~C~~~f~~~~~l~~H~~~H~~~  772 (836)
                      +|+.|.++|.++..|..|.+.|+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4556666666666666666655554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.33  E-value=7.3e-05  Score=38.59  Aligned_cols=26  Identities=35%  Similarity=0.576  Sum_probs=23.6

Q ss_pred             ccccccccccCHHHHHHHHhhhcCCc
Q psy6556          22 HCPLCSKQFSKLTTLKRHVGIHMKTQ   47 (836)
Q Consensus        22 ~C~~C~~~f~~~~~l~~H~~~h~~~~   47 (836)
                      +||.|.++|.++..|+.|-+.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999998864

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=2.9e-05  Score=40.77  Aligned_cols=23  Identities=30%  Similarity=0.546  Sum_probs=12.1

Q ss_pred             ccCccchhcccchhHHHHHhhcC
Q psy6556         779 RCHKCNATFRIKKFLTRHMKTHL  801 (836)
Q Consensus       779 ~C~~C~~~F~~~~~L~~H~~~h~  801 (836)
                      .|.+||++|.-.+.|.+|...|+
T Consensus         4 vc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTS
T ss_pred             hHHHHhHHHHHHHHHHHHhhccc
Confidence            45555555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=6.2e-05  Score=39.55  Aligned_cols=25  Identities=32%  Similarity=0.723  Sum_probs=14.7

Q ss_pred             eecCcccccccchhhhhhHHHhhcc
Q psy6556         747 YVCNYCGKSYIDKRDYTNHVSVHME  771 (836)
Q Consensus       747 ~~C~~C~~~f~~~~~l~~H~~~H~~  771 (836)
                      ..|..||+.|...+.|.+|..+|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3556666666666666666665554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.17  E-value=0.00012  Score=38.84  Aligned_cols=25  Identities=48%  Similarity=0.934  Sum_probs=20.5

Q ss_pred             Ccccccc--ccccccCHHHHHHHHhhh
Q psy6556          19 RTYHCPL--CSKQFSKLTTLKRHVGIH   43 (836)
Q Consensus        19 ~~~~C~~--C~~~f~~~~~l~~H~~~h   43 (836)
                      .||.|+.  |++.|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5788876  888888888888888776

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=9.7e-05  Score=38.64  Aligned_cols=26  Identities=46%  Similarity=0.769  Sum_probs=17.7

Q ss_pred             ccccCCccchhhcchhhHHHHhhhhc
Q psy6556         626 KPYKCTKCNYSARVLSNKLAHERIYH  651 (836)
Q Consensus       626 ~~~~C~~C~~~f~~~~~l~~H~~~h~  651 (836)
                      +||+|..|++.....+.|..|.|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            56777777777777777777766653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.12  E-value=0.00017  Score=38.24  Aligned_cols=29  Identities=24%  Similarity=0.624  Sum_probs=26.1

Q ss_pred             CCccccccccccccCHHHHHHHHhhhcCC
Q psy6556          18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKT   46 (836)
Q Consensus        18 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   46 (836)
                      |+.|.|..|...|..+..|+.||..|+++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            67899999999999999999999998874

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00013  Score=39.64  Aligned_cols=26  Identities=27%  Similarity=0.590  Sum_probs=16.2

Q ss_pred             CcccCCc--ccccccCchhHHHHHHhhc
Q psy6556         715 RRFSCTN--CSLNFTYLSNLIRHRRIKH  740 (836)
Q Consensus       715 ~~~~C~~--C~~~f~~~~~L~~H~~~~h  740 (836)
                      +||.|.+  |+++++..++|++|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4566655  6666666666666666555

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00012  Score=39.05  Aligned_cols=28  Identities=32%  Similarity=0.795  Sum_probs=20.0

Q ss_pred             ccccCCccchhhcchhhHHHHhhhhccC
Q psy6556         626 KPYKCTKCNYSARVLSNKLAHERIYHQD  653 (836)
Q Consensus       626 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  653 (836)
                      +||+|.+|+..-.+.++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            4777777777777777777777766654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.97  E-value=0.00025  Score=41.97  Aligned_cols=29  Identities=28%  Similarity=0.797  Sum_probs=22.0

Q ss_pred             CCccccccccccccCHHHHHHHHhhhcCC
Q psy6556          18 ERTYHCPLCSKQFSKLTTLKRHVGIHMKT   46 (836)
Q Consensus        18 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   46 (836)
                      .+.|.|.+|++.|.+-.+|--|++.|..+
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcch
Confidence            45678888888888888888888777554

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.94  E-value=0.00022  Score=36.12  Aligned_cols=22  Identities=36%  Similarity=0.776  Sum_probs=10.8

Q ss_pred             ccCccchhcccchhHHHHHhhc
Q psy6556         779 RCHKCNATFRIKKFLTRHMKTH  800 (836)
Q Consensus       779 ~C~~C~~~F~~~~~L~~H~~~h  800 (836)
                      +|.+|..+|.-++.|.+|.+.|
T Consensus         2 kcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGGT
T ss_pred             cccchHHHHHHHHHHHHHHHhh
Confidence            4445555555555555554444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00042  Score=36.99  Aligned_cols=28  Identities=29%  Similarity=0.630  Sum_probs=22.3

Q ss_pred             cceecccccccccChHHHHHHHHhhccC
Q psy6556          47 QPVRCGYCGQFFLDLGRLNAHIRQRHTS   74 (836)
Q Consensus        47 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~   74 (836)
                      +||.|.+|.....+.++|..|++..|..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            4788888888888888888888877754

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00048  Score=36.78  Aligned_cols=27  Identities=33%  Similarity=0.613  Sum_probs=16.9

Q ss_pred             CcccCCcccccccCchhHHHHHHhhcC
Q psy6556         715 RRFSCTNCSLNFTYLSNLIRHRRIKHS  741 (836)
Q Consensus       715 ~~~~C~~C~~~f~~~~~L~~H~~~~h~  741 (836)
                      +||+|..|...-...++|..|+++.|+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            456666666666666666666666654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00028  Score=37.65  Aligned_cols=27  Identities=37%  Similarity=0.645  Sum_probs=20.6

Q ss_pred             CcccCCcccccccCchhHHHHHHhhcC
Q psy6556         715 RRFSCTNCSLNFTYLSNLIRHRRIKHS  741 (836)
Q Consensus       715 ~~~~C~~C~~~f~~~~~L~~H~~~~h~  741 (836)
                      +||+|+.|+.-..+.++|..|++..|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            577888888777778888888777664

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00019  Score=38.19  Aligned_cols=23  Identities=39%  Similarity=0.784  Sum_probs=20.2

Q ss_pred             cccCCccchhhcchhhHHHHhhh
Q psy6556         627 PYKCTKCNYSARVLSNKLAHERI  649 (836)
Q Consensus       627 ~~~C~~C~~~f~~~~~l~~H~~~  649 (836)
                      ||.|..|+.+|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            78899999999999999999874

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00029  Score=41.60  Aligned_cols=25  Identities=20%  Similarity=0.614  Sum_probs=19.1

Q ss_pred             cCcCcccCCcccccccCchhHHHHH
Q psy6556         712 LKVRRFSCTNCSLNFTYLSNLIRHR  736 (836)
Q Consensus       712 ~~~~~~~C~~C~~~f~~~~~L~~H~  736 (836)
                      +|.+||.|.+|++.|-+...+.+|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhh
Confidence            4677888888888888887777776

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00026  Score=37.65  Aligned_cols=22  Identities=45%  Similarity=0.809  Sum_probs=14.6

Q ss_pred             ccccCccchhcccchhHHHHHh
Q psy6556         777 TQRCHKCNATFRIKKFLTRHMK  798 (836)
Q Consensus       777 ~~~C~~C~~~F~~~~~L~~H~~  798 (836)
                      ||.|..|+.+|.++..|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            3666666666666666666665

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.68  E-value=0.00064  Score=34.39  Aligned_cols=24  Identities=38%  Similarity=0.890  Sum_probs=19.2

Q ss_pred             cccccccccccCHHHHHHHHhhhc
Q psy6556          21 YHCPLCSKQFSKLTTLKRHVGIHM   44 (836)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h~   44 (836)
                      |+|..|.++|-.++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678888888888888888887774

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.63  E-value=0.0004  Score=35.15  Aligned_cols=23  Identities=35%  Similarity=0.610  Sum_probs=19.1

Q ss_pred             ccccCccchhcccchhHHHHHhh
Q psy6556         777 TQRCHKCNATFRIKKFLTRHMKT  799 (836)
Q Consensus       777 ~~~C~~C~~~F~~~~~L~~H~~~  799 (836)
                      ||+|..|+..|.++..|+.||..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            58888888888888888888863

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.00049  Score=37.68  Aligned_cols=25  Identities=28%  Similarity=0.711  Sum_probs=14.1

Q ss_pred             ceecCc--ccccccchhhhhhHH-Hhhc
Q psy6556         746 KYVCNY--CGKSYIDKRDYTNHV-SVHM  770 (836)
Q Consensus       746 ~~~C~~--C~~~f~~~~~l~~H~-~~H~  770 (836)
                      ||.|++  |++.|++.++.-+|+ |+|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            555555  555555555555554 5554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.00046  Score=40.73  Aligned_cols=24  Identities=38%  Similarity=0.816  Sum_probs=17.1

Q ss_pred             CCCceeccccccccCCcchHHHHH
Q psy6556         142 NIKPYACKYCGNAFAHKSSRDAHQ  165 (836)
Q Consensus       142 ~~~~~~C~~C~~~f~~~~~L~~H~  165 (836)
                      |.+||.|.+|++.|..+.++.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            567777777777777777777765

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.62  E-value=0.00057  Score=40.42  Aligned_cols=28  Identities=25%  Similarity=0.688  Sum_probs=21.7

Q ss_pred             CceeccccccccCCcchHHHHHHHhCCC
Q psy6556         144 KPYACKYCGNAFAHKSSRDAHQNIHTDL  171 (836)
Q Consensus       144 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  171 (836)
                      +.|.|.+|++.|.+-.+|--||+.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4578888888888888888888887654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.60  E-value=0.00083  Score=35.54  Aligned_cols=26  Identities=15%  Similarity=0.526  Sum_probs=13.2

Q ss_pred             ceecCcccccccchhhhhhHHHhhcc
Q psy6556         746 KYVCNYCGKSYIDKRDYTNHVSVHME  771 (836)
Q Consensus       746 ~~~C~~C~~~f~~~~~l~~H~~~H~~  771 (836)
                      .|.|..|...|..+..|+.||-.|++
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            44555555555555555555555443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.52  E-value=0.00072  Score=35.77  Aligned_cols=24  Identities=29%  Similarity=0.563  Sum_probs=13.1

Q ss_pred             ceecCc--ccccccchhhhhhHHHhh
Q psy6556         746 KYVCNY--CGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       746 ~~~C~~--C~~~f~~~~~l~~H~~~H  769 (836)
                      ||+|+.  |++.|+..+.|.+|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            455554  555555555555555554

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.00077  Score=35.35  Aligned_cols=25  Identities=40%  Similarity=0.699  Sum_probs=19.6

Q ss_pred             cccCCccchhhcchhhHHHHhhhhc
Q psy6556         627 PYKCTKCNYSARVLSNKLAHERIYH  651 (836)
Q Consensus       627 ~~~C~~C~~~f~~~~~l~~H~~~h~  651 (836)
                      |-+|+.|+++..++.+|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5678888888888888888888774

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00078  Score=36.90  Aligned_cols=27  Identities=44%  Similarity=0.952  Sum_probs=20.5

Q ss_pred             Cceeccc--cccccCCcchHHHHH-HHhCC
Q psy6556         144 KPYACKY--CGNAFAHKSSRDAHQ-NIHTD  170 (836)
Q Consensus       144 ~~~~C~~--C~~~f~~~~~L~~H~-~~h~~  170 (836)
                      +||.|.+  |.++|.+.+....|+ ++|.+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5788877  888888888888886 66654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.24  E-value=0.0014  Score=35.91  Aligned_cols=21  Identities=29%  Similarity=0.566  Sum_probs=8.5

Q ss_pred             eecccccccccChHHHHHHHH
Q psy6556          49 VRCGYCGQFFLDLGRLNAHIR   69 (836)
Q Consensus        49 ~~C~~C~~~f~~~~~l~~H~~   69 (836)
                      |.|.+|++.|...+.|.+|..
T Consensus         2 f~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHT
T ss_pred             cccccccchhhHHHHHHHHHH
Confidence            334444444444444444433

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.77  E-value=0.0041  Score=31.42  Aligned_cols=21  Identities=33%  Similarity=0.836  Sum_probs=9.1

Q ss_pred             ceecccccccccChHHHHHHH
Q psy6556          48 PVRCGYCGQFFLDLGRLNAHI   68 (836)
Q Consensus        48 ~~~C~~C~~~f~~~~~l~~H~   68 (836)
                      ||+|..|...|....+|+.||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            344444444444444444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.72  E-value=0.001  Score=35.39  Aligned_cols=27  Identities=33%  Similarity=0.705  Sum_probs=16.5

Q ss_pred             CccCCc--cchhcccchhhhhccccccCC
Q psy6556         803 QYRCTR--CNKTFKQNTSFIRHSLKHFNS  829 (836)
Q Consensus       803 ~~~C~~--C~~~f~~~~~l~~H~~~H~~~  829 (836)
                      ||.|..  |.+.|.+...|.+|...|+++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455553  666666666666666666553

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.57  E-value=0.0035  Score=34.32  Aligned_cols=25  Identities=36%  Similarity=0.692  Sum_probs=11.8

Q ss_pred             CcccCcCCCcccChhhhhhhhhccC
Q psy6556         173 PYLCLTCGQSFRTFNLMKRHNLCDH  197 (836)
Q Consensus       173 ~~~C~~C~~~f~~~~~l~~H~~~~h  197 (836)
                      ||.|.+|++.|.....|.+|...-|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            3444444444444444444444333

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.0053  Score=35.80  Aligned_cols=28  Identities=29%  Similarity=0.662  Sum_probs=19.6

Q ss_pred             CCCcccc--ccccccccCHHHHHHHHhhhc
Q psy6556          17 DERTYHC--PLCSKQFSKLTTLKRHVGIHM   44 (836)
Q Consensus        17 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~   44 (836)
                      +++||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            5677777  557777777777777766664

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.34  E-value=0.0051  Score=32.63  Aligned_cols=26  Identities=31%  Similarity=0.645  Sum_probs=14.4

Q ss_pred             ceeccc--cccccCCcchHHHHHHHhCC
Q psy6556         145 PYACKY--CGNAFAHKSSRDAHQNIHTD  170 (836)
Q Consensus       145 ~~~C~~--C~~~f~~~~~L~~H~~~h~~  170 (836)
                      ||.|.+  |.+.|.+...|.+|...|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455543  55555555555555555554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.24  E-value=0.0048  Score=32.04  Aligned_cols=22  Identities=27%  Similarity=0.456  Sum_probs=14.5

Q ss_pred             ccccCccchhcccchhHHHHHh
Q psy6556         777 TQRCHKCNATFRIKKFLTRHMK  798 (836)
Q Consensus       777 ~~~C~~C~~~F~~~~~L~~H~~  798 (836)
                      ||+|..||+.+.++..|.+|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            3667777777777777766654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.22  E-value=0.0067  Score=31.50  Aligned_cols=22  Identities=27%  Similarity=0.647  Sum_probs=13.0

Q ss_pred             cccCCcccccccCchhHHHHHH
Q psy6556         716 RFSCTNCSLNFTYLSNLIRHRR  737 (836)
Q Consensus       716 ~~~C~~C~~~f~~~~~L~~H~~  737 (836)
                      ||+|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4566666666666666665543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.0083  Score=31.41  Aligned_cols=25  Identities=32%  Similarity=0.481  Sum_probs=21.7

Q ss_pred             ccccccccccccCHHHHHHHHhhhc
Q psy6556          20 TYHCPLCSKQFSKLTTLKRHVGIHM   44 (836)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~   44 (836)
                      |-+|+.|+.+.+++..|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4579999999999999999999884

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.0096  Score=34.71  Aligned_cols=27  Identities=19%  Similarity=0.577  Sum_probs=19.5

Q ss_pred             CCceec--CcccccccchhhhhhHHHhhc
Q psy6556         744 EGKYVC--NYCGKSYIDKRDYTNHVSVHM  770 (836)
Q Consensus       744 ~~~~~C--~~C~~~f~~~~~l~~H~~~H~  770 (836)
                      ++||.|  +-|+++|.+.-.|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            677777  447777777777777777764

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.76  E-value=0.0093  Score=31.08  Aligned_cols=23  Identities=26%  Similarity=0.492  Sum_probs=16.3

Q ss_pred             ceecCcccccccchhhhhhHHHh
Q psy6556         746 KYVCNYCGKSYIDKRDYTNHVSV  768 (836)
Q Consensus       746 ~~~C~~C~~~f~~~~~l~~H~~~  768 (836)
                      +|+|+.|+-....+++|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            46777777777777777777664

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.61  E-value=0.0086  Score=33.43  Aligned_cols=24  Identities=29%  Similarity=0.577  Sum_probs=16.3

Q ss_pred             cccCccchhcccchhHHHHHhhcC
Q psy6556         778 QRCHKCNATFRIKKFLTRHMKTHL  801 (836)
Q Consensus       778 ~~C~~C~~~F~~~~~L~~H~~~h~  801 (836)
                      |.|..||++|++++.+.+|...-+
T Consensus         5 fvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeecccccchhcchHHHHHhhhcC
Confidence            677777777777777777755443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.51  E-value=0.0064  Score=30.85  Aligned_cols=24  Identities=38%  Similarity=0.908  Sum_probs=19.0

Q ss_pred             cccccchhhcCChhHHHchHhhhc
Q psy6556         308 FNCSLCEKQFRQKIHVKNHLRIIH  331 (836)
Q Consensus       308 ~~C~~C~~~f~~~~~l~~H~~~~H  331 (836)
                      |.|++|-+.|..+.++..|.+++|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888888888888888887765

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.41  E-value=0.0084  Score=30.40  Aligned_cols=22  Identities=32%  Similarity=0.490  Sum_probs=17.6

Q ss_pred             cccCccchhcccchhHHHHHhh
Q psy6556         778 QRCHKCNATFRIKKFLTRHMKT  799 (836)
Q Consensus       778 ~~C~~C~~~F~~~~~L~~H~~~  799 (836)
                      |.|++|-+.|+++..+..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6688888888888888888765

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.024  Score=34.69  Aligned_cols=25  Identities=32%  Similarity=0.664  Sum_probs=17.1

Q ss_pred             CccccccccccccCHHHHHHHHhhh
Q psy6556          19 RTYHCPLCSKQFSKLTTLKRHVGIH   43 (836)
Q Consensus        19 ~~~~C~~C~~~f~~~~~l~~H~~~h   43 (836)
                      ..|.|-+|+|.|.....|+.|...|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            4566777777777777777776655

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.57  E-value=0.013  Score=35.81  Aligned_cols=25  Identities=24%  Similarity=0.363  Sum_probs=22.0

Q ss_pred             ccccCccchhcccchhHHHHHhhcC
Q psy6556         777 TQRCHKCNATFRIKKFLTRHMKTHL  801 (836)
Q Consensus       777 ~~~C~~C~~~F~~~~~L~~H~~~h~  801 (836)
                      -|.|.+||+.|+....|+.|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4789999999999999999998884

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.75  E-value=0.049  Score=28.35  Aligned_cols=21  Identities=24%  Similarity=0.566  Sum_probs=9.3

Q ss_pred             eecccccccccChHHHHHHHH
Q psy6556          49 VRCGYCGQFFLDLGRLNAHIR   69 (836)
Q Consensus        49 ~~C~~C~~~f~~~~~l~~H~~   69 (836)
                      |.|+.|+.....+++|..|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            344444444444444444444

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.46  E-value=0.03  Score=37.88  Aligned_cols=42  Identities=26%  Similarity=0.674  Sum_probs=27.9

Q ss_pred             ccccCCCccccccccccccCHHHHHHHHhhhcCCcceeccccccc
Q psy6556          13 HESQDERTYHCPLCSKQFSKLTTLKRHVGIHMKTQPVRCGYCGQF   57 (836)
Q Consensus        13 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   57 (836)
                      +...+...|+||.|+++|+....+.-   +-.....|.|.+|+..
T Consensus         7 rd~~~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_           7 RDSTNRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSCCSSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             hccccCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            34556678888888888876554433   3445566888888754

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.40  E-value=0.069  Score=29.75  Aligned_cols=26  Identities=23%  Similarity=0.650  Sum_probs=16.8

Q ss_pred             ceecCcccccccchhhhhhHHHhhcc
Q psy6556         746 KYVCNYCGKSYIDKRDYTNHVSVHME  771 (836)
Q Consensus       746 ~~~C~~C~~~f~~~~~l~~H~~~H~~  771 (836)
                      .|.|..||+.|..+..|.+|...-++
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            36677777777777777666655444

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.29  E-value=0.026  Score=32.16  Aligned_cols=24  Identities=50%  Similarity=0.757  Sum_probs=18.5

Q ss_pred             cccchHhhcChhhHHHHhhhcCCC
Q psy6556         397 CAVCGDTFKTNYNYFVHMRRHTGF  420 (836)
Q Consensus       397 C~~C~~~f~~~~~l~~H~~~h~~~  420 (836)
                      |+-=++.|+....|..|||+|+|+
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456788889999999998875

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.94  E-value=0.12  Score=27.32  Aligned_cols=23  Identities=35%  Similarity=0.655  Sum_probs=17.1

Q ss_pred             ccccccccccccCHHHHHHHHhh
Q psy6556          20 TYHCPLCSKQFSKLTTLKRHVGI   42 (836)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~   42 (836)
                      .|.|..||+...+...++.|+..
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            47788888888888777777643

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.30  E-value=0.055  Score=29.24  Aligned_cols=22  Identities=27%  Similarity=0.380  Sum_probs=16.2

Q ss_pred             cchHhhhchhHHHHHHHHhcCc
Q psy6556         693 ICNQSFALFSNLNAHYNKHLKV  714 (836)
Q Consensus       693 ~C~~~f~~~~~L~~H~~~h~~~  714 (836)
                      .|+..|.....|..|+-.|+|+
T Consensus        10 dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          10 DCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GGCCEESSHHHHHHHHHHHHCC
T ss_pred             CcchhhccchhhhHHhhhhcCC
Confidence            3777777777777777777764

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.93  E-value=0.072  Score=30.34  Aligned_cols=20  Identities=10%  Similarity=0.107  Sum_probs=13.3

Q ss_pred             cccccchhhhhhHHHhhccc
Q psy6556         753 GKSYIDKRDYTNHVSVHMER  772 (836)
Q Consensus       753 ~~~f~~~~~l~~H~~~H~~~  772 (836)
                      ++.|..+..|..|||+|+++
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            34577777777777777654

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.51  E-value=0.093  Score=27.52  Aligned_cols=18  Identities=28%  Similarity=0.628  Sum_probs=12.2

Q ss_pred             ccccccchhhhhhHHHhh
Q psy6556         752 CGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       752 C~~~f~~~~~l~~H~~~H  769 (836)
                      |++.|.+.+.+++|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            666677777776666655

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.64  E-value=0.19  Score=27.66  Aligned_cols=21  Identities=24%  Similarity=0.583  Sum_probs=15.8

Q ss_pred             ccccCccccccCChhhHHhhh
Q psy6556          79 YYKCDKCNKTYKSKYKFERHK   99 (836)
Q Consensus        79 ~~~C~~C~~~f~~~~~l~~H~   99 (836)
                      .|.|.-||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            467777777777777777776

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.93  E-value=0.15  Score=28.07  Aligned_cols=24  Identities=29%  Similarity=0.551  Sum_probs=19.5

Q ss_pred             CCccccccccccccCHHHHHHHHh
Q psy6556          18 ERTYHCPLCSKQFSKLTTLKRHVG   41 (836)
Q Consensus        18 ~~~~~C~~C~~~f~~~~~l~~H~~   41 (836)
                      .-.|.|+-||-.|++.+.|..|+.
T Consensus         6 parf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ccceeccccceeecChhHHHhhhh
Confidence            346888888888888888888874

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.01  E-value=0.2  Score=27.04  Aligned_cols=27  Identities=33%  Similarity=0.693  Sum_probs=17.2

Q ss_pred             ceeccc--cccccCCcchHHHHHHHhCCC
Q psy6556         145 PYACKY--CGNAFAHKSSRDAHQNIHTDL  171 (836)
Q Consensus       145 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~  171 (836)
                      .|-|.+  |+..|.....|+.|+-.|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            355543  677777777777777666653

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.70  E-value=0.15  Score=26.72  Aligned_cols=20  Identities=30%  Similarity=0.587  Sum_probs=17.9

Q ss_pred             ccchhcccchhHHHHHhhcC
Q psy6556         782 KCNATFRIKKFLTRHMKTHL  801 (836)
Q Consensus       782 ~C~~~F~~~~~L~~H~~~h~  801 (836)
                      -|++.|...+.++.|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            39999999999999999885

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.65  E-value=0.18  Score=26.64  Aligned_cols=20  Identities=15%  Similarity=0.507  Sum_probs=10.5

Q ss_pred             cccccchHhhhchhHHHHHH
Q psy6556         689 AKCKICNQSFALFSNLNAHY  708 (836)
Q Consensus       689 ~~C~~C~~~f~~~~~L~~H~  708 (836)
                      |.|..||+..++...++.|+
T Consensus         3 ftc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEE
Confidence            44555555555555555554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.93  E-value=0.086  Score=35.58  Aligned_cols=14  Identities=21%  Similarity=0.800  Sum_probs=7.6

Q ss_pred             ceecCcccccccch
Q psy6556         746 KYVCNYCGKSYIDK  759 (836)
Q Consensus       746 ~~~C~~C~~~f~~~  759 (836)
                      .|+|+.|+++|+..
T Consensus        14 ~y~Cp~C~~~ys~L   27 (62)
T d1vd4a_          14 SFKCPVCSSTFTDL   27 (62)
T ss_dssp             EEECSSSCCEEEHH
T ss_pred             ceECCCCCCCcchh
Confidence            45555555555443

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.92  E-value=0.36  Score=29.23  Aligned_cols=25  Identities=28%  Similarity=0.689  Sum_probs=14.3

Q ss_pred             CCCccccccccccccCHHHHHHHHh
Q psy6556          17 DERTYHCPLCSKQFSKLTTLKRHVG   41 (836)
Q Consensus        17 ~~~~~~C~~C~~~f~~~~~l~~H~~   41 (836)
                      .+.|-.||+|+........|++|+.
T Consensus        21 s~qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHH
Confidence            4555556666666555555665553

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.24  E-value=0.35  Score=29.29  Aligned_cols=30  Identities=27%  Similarity=0.473  Sum_probs=25.3

Q ss_pred             cCCcceecccccccccChHHHHHHHHhhcc
Q psy6556          44 MKTQPVRCGYCGQFFLDLGRLNAHIRQRHT   73 (836)
Q Consensus        44 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~   73 (836)
                      ..+.|-.|++|+.......+|++|+...|-
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            356788999999999999999999887664

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.94  E-value=0.31  Score=25.03  Aligned_cols=18  Identities=28%  Similarity=0.599  Sum_probs=8.1

Q ss_pred             ccccccchhhhhhHHHhh
Q psy6556         752 CGKSYIDKRDYTNHVSVH  769 (836)
Q Consensus       752 C~~~f~~~~~l~~H~~~H  769 (836)
                      ||+.|..-..|..|+.+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            444444444444444443

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=81.89  E-value=0.35  Score=28.36  Aligned_cols=27  Identities=19%  Similarity=0.460  Sum_probs=17.4

Q ss_pred             CCCceecCcccccccchhhhhhHHHhhcccCCCCccccCccch
Q psy6556         743 HEGKYVCNYCGKSYIDKRDYTNHVSVHMERKSGYTQRCHKCNA  785 (836)
Q Consensus       743 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~~~~C~~C~~  785 (836)
                      .++.|.|++||...             .++.   |-+|++||.
T Consensus         2 ~~~~~vC~vCGyi~-------------~g~~---Pe~CPvCg~   28 (36)
T d1yuza2           2 DDKFHLCPICGYIH-------------KGED---FEKCPICFR   28 (36)
T ss_dssp             SCCEEECSSSCCEE-------------ESSC---CSBCTTTCC
T ss_pred             CCCEEECCCCCCEe-------------eCCC---CCcCCCCCC
Confidence            35678888888754             3432   356888874

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.76  E-value=0.68  Score=30.37  Aligned_cols=28  Identities=29%  Similarity=0.680  Sum_probs=22.6

Q ss_pred             CCCccccccccccccCHHHHHHHHhhhc
Q psy6556          17 DERTYHCPLCSKQFSKLTTLKRHVGIHM   44 (836)
Q Consensus        17 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~   44 (836)
                      +...|+|..|+-.|.+...|..|+..|.
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhcc
Confidence            4557888888888888888888887775