Diaphorina citri psyllid: psy6649

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240--

MTRPRRYELGLILLLVHILHLGADTIPPATLGLVFLQSMVYLNIFRKPWSTLDVCISADAVIQQRDYKRLILSAFEHGDDMHLYYNMVSLILKGRQLEKIYGWGKFLSLVIFLTVFTSLYYILLAYIVFYITNDTSELSHCAIGFSAVLFAMKTILTRLQPDAYQQILNINVKAIYAPWFELIIIYLLVPNASFKGHLSGILVGLTYTDTPIGWGLDYVVDKCQEMINGEEQEDMGEEQKQN

ccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccHHHHHccHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHccc

******YELGLILLLVHILHLGADTIPPATLGLVFLQSMVYLNIFRKPWSTLDVCISADAVIQQRDYKRLILSAFEHGDDMHLYYNMVSLILKGRQLEKIYGWGKFLSLVIFLTVFTSLYYILLAYIVFYITNDTSELSHCAIGFSAVLFAMKTILTRLQPDAYQQILNINVKAIYAPWFELIIIYLLVPNASFKGHLSGILVGLTYTDTPIGWGLDYVVDKCQEM****************

xxxxxxxxxxxxHHHHHHHHHHHxxHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Rhomboid-related protein 4		confident	Q8BHC7
Rhomboid-related protein 4		confident	Q4V8F3
Rhomboid-related protein 4		confident	Q8TEB9

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0030176 [CC]	integral to endoplasmic reticulum membrane	probable	GO:0005783, GO:0005789, GO:0042175, GO:0043229, GO:0031301, GO:0031300, GO:0043227, GO:0031227, GO:0031224, GO:0005737, GO:0044446, GO:0031090, GO:0016021, GO:0016020, GO:0043226, GO:0044432, GO:0012505, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0044425, GO:0044422
GO:0044322 [CC]	endoplasmic reticulum quality control compartment	probable	GO:0005737, GO:0005575, GO:0005783, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044432, GO:0044444, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0034644 [BP]	cellular response to UV	probable	GO:0009628, GO:0051716, GO:0071478, GO:0071482, GO:0009314, GO:0050896, GO:0009987, GO:0008150, GO:0009411, GO:0009416, GO:0044763, GO:0071214, GO:0044699
GO:0043687 [BP]	post-translational protein modification	probable	GO:0044267, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0006464, GO:0043170, GO:0071704, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152
GO:0031293 [BP]	membrane protein intracellular domain proteolysis	probable	GO:0044238, GO:0019538, GO:0033619, GO:0043170, GO:0071704, GO:0008150, GO:0008152, GO:0006508
GO:0034620 [BP]	cellular response to unfolded protein	probable	GO:0051716, GO:0006986, GO:0070887, GO:0006950, GO:0050896, GO:0009987, GO:0071310, GO:0008150, GO:0035967, GO:0035966, GO:0044763, GO:0033554, GO:0042221, GO:0010033, GO:0044699
GO:0010954 [BP]	positive regulation of protein processing	probable	GO:0070613, GO:0010604, GO:0080090, GO:0060255, GO:0051246, GO:0051247, GO:0050789, GO:0065007, GO:0048518, GO:0008150, GO:0019222, GO:0010468, GO:0009893
GO:0030433 [BP]	ER-associated protein catabolic process	probable	GO:0044248, GO:0043632, GO:0044267, GO:1901575, GO:0044265, GO:0044260, GO:0043161, GO:0071704, GO:0006508, GO:0044238, GO:0009987, GO:0019941, GO:0008150, GO:0030163, GO:0008152, GO:0044257, GO:0009056, GO:0009057, GO:0051603, GO:0019538, GO:0010498, GO:0044237, GO:0043170, GO:0006511

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2NR9, chain A
Confidence level:confident
Coverage over the Query: 24-214
View the alignment between query and template
View the model in PyMOL