Diaphorina citri psyllid: psy669

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTGRKLDRENQAEHVLETGSGESEATLETGSGESEATLEVLFENSTWENFHETNITGDFLFRAVQ
cEEEccccccccccEEEEEEEEECccccccCEEEEEEEEEEEccccccccccccEEEEEEcccccccEEEEEEEECcccccccEEEEEECcccccccEEEEccccEEEEcccccccccccEEEEEEEEECccccccccCEEEEEEEEEEcccccccccccCEEEEEccccccccccEEEEEEEEEccccccccEEEEEEECccccccEEEEcccCEEEEccccccccccCEEEEEEEECccccccccc
NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTGRKLDRENQAEHVLETGSGESEATLETGSGESEATLEVLFENSTWENFHETNITGDF*F****
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NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTGRKLDRENQAEHVLETGSGESEATLETGSGESEATLEVLFENSTWENFHETNITGDFLFRAVQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protocadherin Fat 1 Plays an essential role for cellular polarization, directed cell migration and modulating cell-cell contact.confidentQ14517

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005911 [CC]cell-cell junctionprobableGO:0005575, GO:0030054
GO:0042995 [CC]cell projectionprobableGO:0005575, GO:0044464, GO:0005623
GO:0050794 [BP]regulation of cellular processprobableGO:0008150, GO:0065007, GO:0050789
GO:0016337 [BP]cell-cell adhesionprobableGO:0009987, GO:0008150, GO:0007155, GO:0044763, GO:0022610, GO:0044699
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0032502 [BP]developmental processprobableGO:0008150
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1Q55, chain A
Confidence level:very confident
Coverage over the Query: 1-236
View the alignment between query and template
View the model in PyMOL