Diaphorina citri psyllid: psy6898


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MGRVQGMLQVLEVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSDGVLPSVQRAIAAGLVIYRFH
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccc
*******LQVLEVHDRR**G**ISTV****************************************************************DGVLPSVQRAIAAGLVIYRF*
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MGRVQGMLQVLEVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSDGVLPSVQRAIAAGLVIYRFH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Collagen alpha-1(XXIV) chain Involved in osteoblast differentiation.confidentQ30D77

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0071230 [BP]cellular response to amino acid stimulusprobableGO:1901700, GO:0043200, GO:0051716, GO:0009719, GO:1901701, GO:1901698, GO:0071417, GO:1901699, GO:0008150, GO:0044699, GO:0071229, GO:0071495, GO:0071310, GO:0044763, GO:0001101, GO:0070887, GO:0050896, GO:0042221, GO:0009987, GO:0010243, GO:0010033
GO:0005788 [CC]endoplasmic reticulum lumenprobableGO:0005737, GO:0005575, GO:0005783, GO:0043233, GO:0044464, GO:0043229, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0044444, GO:0005623, GO:0044424, GO:0044432, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0070208 [BP]protein heterotrimerizationprobableGO:0051259, GO:0022607, GO:0070206, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0051291, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0048407 [MF]platelet-derived growth factor bindingprobableGO:0003674, GO:0019838, GO:0005515, GO:0005488
GO:0060111 [CC]alae of collagen and cuticulin-based cuticle extracellular matrixprobableGO:0005578, GO:0031012, GO:0005575, GO:0005576, GO:0060103, GO:0060102, GO:0044420, GO:0044421
GO:0016525 [BP]negative regulation of angiogenesisprobableGO:0051093, GO:0022603, GO:0050793, GO:0045765, GO:0008150, GO:1901342, GO:0065007, GO:2000026, GO:0051239, GO:0048519, GO:0050789
GO:0005615 [CC]extracellular spaceprobableGO:0005575, GO:0005576, GO:0044421
GO:0007179 [BP]transforming growth factor beta receptor signaling pathwayprobableGO:0007166, GO:0023052, GO:0007165, GO:0070887, GO:0007167, GO:0050789, GO:0044699, GO:0009719, GO:0051716, GO:0070848, GO:0071310, GO:0065007, GO:0071559, GO:0071495, GO:0009987, GO:0050794, GO:0042221, GO:0044763, GO:0007154, GO:0010033, GO:0007178, GO:0044700, GO:0071363, GO:0050896, GO:0071560, GO:0008150
GO:0050766 [BP]positive regulation of phagocytosisprobableGO:0051130, GO:0050764, GO:0032879, GO:0051050, GO:0051049, GO:0060627, GO:0065007, GO:0048518, GO:0008150, GO:0045807, GO:0051128, GO:0030100, GO:0050789, GO:0050794, GO:0048522
GO:0009887 [BP]organ morphogenesisprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0009888 [BP]tissue developmentprobableGO:0032502, GO:0048856, GO:0008150
GO:0005587 [CC]collagen type IVprobableGO:0005604, GO:0005581, GO:0005578, GO:0005575, GO:0005576, GO:0030935, GO:0031012, GO:0044420, GO:0044421
GO:0060107 [CC]annuli extracellular matrixprobableGO:0005578, GO:0031012, GO:0005575, GO:0005576, GO:0060103, GO:0060102, GO:0044420, GO:0044421, GO:0060106
GO:0051635 [MF]bacterial cell surface bindingprobable
GO:0022414 [BP]reproductive processprobableGO:0008150, GO:0000003
GO:0034097 [BP]response to cytokine stimulusprobableGO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:0005771 [CC]multivesicular bodyprobableGO:0005737, GO:0043231, GO:0043227, GO:0005770, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0005768, GO:0043226
GO:0006950 [BP]response to stressprobableGO:0050896, GO:0008150
GO:0005593 [CC]FACIT collagenprobableGO:0005581, GO:0005578, GO:0031012, GO:0005575, GO:0005576, GO:0030934, GO:0044420, GO:0044421
GO:0005201 [MF]extracellular matrix structural constituentprobableGO:0003674, GO:0005198
GO:0005791 [CC]rough endoplasmic reticulumprobableGO:0005737, GO:0005783, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226, GO:0043231
GO:0010876 [BP]lipid localizationprobableGO:0033036, GO:0008150, GO:0051179
GO:0005178 [MF]integrin bindingprobableGO:0032403, GO:0005102, GO:0003674, GO:0005488, GO:0005515
GO:0030198 [BP]extracellular matrix organizationprobableGO:0009987, GO:0016043, GO:0044763, GO:0044699, GO:0043062, GO:0008150, GO:0071840
GO:0042383 [CC]sarcolemmaprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886
GO:0007411 [BP]axon guidanceprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0042330, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0006935, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0007409, GO:0048731, GO:0042221, GO:0022008, GO:0048858, GO:0040011, GO:0048699, GO:0032990, GO:0009605, GO:0050896, GO:0048856, GO:0007399, GO:0048812, GO:0044763
GO:0031410 [CC]cytoplasmic vesicleprobableGO:0005737, GO:0031982, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043226
GO:0040007 [BP]growthprobableGO:0008150
GO:0009790 [BP]embryo developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0008150, GO:0007275, GO:0044699
GO:0007155 [BP]cell adhesionprobableGO:0008150, GO:0009987, GO:0022610, GO:0044763, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2PNE, chain A
Confidence level:probable
Coverage over the Query: 29-36
View the alignment between query and template
View the model in PyMOL