Diaphorina citri psyllid: psy6932

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQRDLSGGGGGGKKQGLVYLMGY

ccccccccccccccEEEEEEcccccccccccccccccccccccccHHHHHHHHHHccccEEEEccccccccccccccccEEEEEEEcccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccCEcEEEEccc

*********TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI*********************************VYLMGY

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MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQRDLSGGGGGGKKQGLVYLMGY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Signal recognition particle 19 kDa protein	Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.	confident	P09132
Signal recognition particle 19 kDa protein	Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.	confident	Q5RBR1
Signal recognition particle 19 kDa protein	Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.	confident	Q9D7A6

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005786 [CC]	signal recognition particle, endoplasmic reticulum targeting	probable	GO:0005737, GO:0032991, GO:0044464, GO:0005623, GO:0030529, GO:0005575, GO:0044444, GO:0048500, GO:0044424, GO:0005622
GO:0005730 [CC]	nucleolus	probable	GO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005739 [CC]	mitochondrion	probable	GO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0042493 [BP]	response to drug	probable	GO:0042221, GO:0050896, GO:0008150
GO:0008312 [MF]	7S RNA binding	probable	GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0006614 [BP]	SRP-dependent cotranslational protein targeting to membrane	probable	GO:0008104, GO:0006613, GO:0006612, GO:0044699, GO:0070972, GO:0070727, GO:0006886, GO:0071702, GO:0016482, GO:0006810, GO:0072599, GO:0072594, GO:0034613, GO:0006605, GO:0045184, GO:0015031, GO:0044765, GO:0008150, GO:0051649, GO:0051234, GO:0051179, GO:0051641, GO:0033036, GO:0046907, GO:0045047, GO:0033365, GO:0044763, GO:0009987
GO:0006412 [BP]	translation	probable	GO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1JID, chain A
Confidence level:very confident
Coverage over the Query: 5-117
View the alignment between query and template
View the model in PyMOL